View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20913_low_3 (Length: 374)
Name: NF20913_low_3
Description: NF20913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20913_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 7212695 - 7212328
Alignment:
| Q |
1 |
tactgagctcataacgaatcaacatttctgacataacttttccttcaaaataaaaacatgttactaccatattccaatcataaataatcatacaacaatc |
100 |
Q |
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| T |
7212695 |
tactgaacacataaggaatcaacatttctgacataacttttccttcaaaagaaaaacatgttactaccatataccaaacataaataatcattcaacaata |
7212596 |
T |
|
| Q |
101 |
attattgatacatttgatctttttcctaagctaatgttttttaatgtccaaacattcccttcattcattccacaaagcaaacataggaacttgattaacc |
200 |
Q |
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| T |
7212595 |
ataattctgacatttgatttaattcctaagctaatgttttttaatgtcaaaacattcccttcattcattccacaaagcaaacataggaacttgattaacc |
7212496 |
T |
|
| Q |
201 |
aaacccaaatttccaagcctattgttgttcatgtggtcattttcattgcttccatcatcaaattttggtccatgcagtgtgaagtaaccatgtccataat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7212495 |
aaacccaaatttccaagcctattgttgttcatgtggtcattttcattgcttccatcatcaaattttggtccatgcagtgtgaagtaaccatgtccataat |
7212396 |
T |
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| Q |
301 |
ctgctccactcactccaaactcattaggtagtcccaatgaacatttgggactttgagggttcatctca |
368 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7212395 |
ctgctccactcactccaaactcattaggtagtcccaatgaacatttgggactttgagggttcatctca |
7212328 |
T |
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