View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20914_high_6 (Length: 520)
Name: NF20914_high_6
Description: NF20914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20914_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 116 - 506
Target Start/End: Original strand, 14804858 - 14805248
Alignment:
| Q |
116 |
cttacctcaagcaaaagatgtgcagttaacaaaccacctctgttgttatctcttagcaatcttgatatggaaggcattgtttctcaattgagggcaatga |
215 |
Q |
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| T |
14804858 |
cttacctcaagcaaaagatgtgcagttaaaaaaccacctctgttgttatctcttagcaatcttgatatggaaggcattgtttctcaattgagggcaatga |
14804957 |
T |
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| Q |
216 |
aatagattgtatgtgaaaaagaaagtgaatgcagtagttatatataacaaagagggagaggtcattggtgaggtcattaacataaacaattacaaatcaa |
315 |
Q |
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| T |
14804958 |
aatagattgtatgtgaaaaggaaagtgaatgcagtagttatatataacaaagagggagaggtcattagtgaggtcattaacataaacaattacaaatcaa |
14805057 |
T |
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| Q |
316 |
ataatatcaaatcatactttacatgacagtataatgaaatagttaaacgaaactataccaattttctcttttgagcagatatgcctcttagcttcaaatc |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14805058 |
ataatatcaaatcatactttacatgacagtataatgaaatagttaaacgaaactataccaattttctcttttgagcagatatgcctcttagcttcaaatc |
14805157 |
T |
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| Q |
416 |
aaaacatatggttgttcttttgttgttacatctgctatgaaaagttggatattcttcggaaatgtccttgtattctgtcgctagcaattca |
506 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14805158 |
aaaacatatggttgttcttttgttgttacatctgctatgaaaagttggatattcttcggaaatgtccttgtattctgtcgctagcaattca |
14805248 |
T |
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