View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20914_low_1 (Length: 839)

Name: NF20914_low_1
Description: NF20914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20914_low_1
NF20914_low_1
[»] chr7 (40 HSPs)
chr7 (234-830)||(43118709-43119298)
chr7 (114-237)||(43119647-43119771)
chr7 (114-198)||(43119461-43119545)
chr7 (616-741)||(16979934-16980059)
chr7 (586-766)||(19676962-19677142)
chr7 (613-763)||(23142646-23142796)
chr7 (640-764)||(34993148-34993272)
chr7 (627-720)||(8896605-8896698)
chr7 (614-743)||(37928290-37928419)
chr7 (618-708)||(18220984-18221074)
chr7 (634-747)||(25530559-25530672)
chr7 (623-741)||(30027956-30028076)
chr7 (627-763)||(12810154-12810289)
chr7 (613-730)||(16685734-16685853)
chr7 (613-730)||(17659970-17660089)
chr7 (616-735)||(43626345-43626464)
chr7 (586-720)||(8746149-8746282)
chr7 (591-764)||(31850719-31850893)
chr7 (615-742)||(1521199-1521323)
chr7 (616-730)||(1309720-1309834)
chr7 (611-730)||(41064292-41064415)
chr7 (635-730)||(31487725-31487820)
chr7 (613-668)||(34993091-34993146)
chr7 (590-720)||(26241575-26241705)
chr7 (603-730)||(42888306-42888433)
chr7 (590-684)||(18756912-18757006)
chr7 (624-678)||(31249568-31249622)
chr7 (619-720)||(45907033-45907134)
chr7 (615-699)||(39786447-39786531)
chr7 (196-239)||(43119322-43119366)
chr7 (244-280)||(49013049-49013085)
chr7 (621-720)||(21515032-21515131)
chr7 (653-708)||(23080658-23080713)
chr7 (661-716)||(23317839-23317894)
chr7 (588-722)||(24937843-24937976)
chr7 (621-691)||(18037851-18037921)
chr7 (460-562)||(39773168-39773270)
chr7 (613-763)||(41760332-41760482)
chr7 (646-763)||(7833770-7833887)
chr7 (613-718)||(47445349-47445454)
[»] chr8 (39 HSPs)
chr8 (613-742)||(44648931-44649060)
chr8 (585-725)||(3137408-3137548)
chr8 (614-730)||(10029165-10029281)
chr8 (587-764)||(20542356-20542533)
chr8 (613-755)||(600350-600492)
chr8 (616-730)||(18200677-18200791)
chr8 (616-730)||(35901412-35901526)
chr8 (615-699)||(3347506-3347590)
chr8 (236-322)||(25105711-25105797)
chr8 (587-724)||(42361481-42361618)
chr8 (618-763)||(17720176-17720322)
chr8 (587-766)||(11150890-11151068)
chr8 (592-742)||(27506920-27507068)
chr8 (618-720)||(547075-547181)
chr8 (610-703)||(18045313-18045406)
chr8 (616-741)||(41726888-41727013)
chr8 (613-741)||(40489842-40489969)
chr8 (627-763)||(43917557-43917693)
chr8 (613-720)||(6270143-6270249)
chr8 (588-724)||(23425231-23425371)
chr8 (634-765)||(34678221-34678351)
chr8 (620-730)||(32881116-32881226)
chr8 (627-738)||(1342317-1342427)
chr8 (679-754)||(23725684-23725759)
chr8 (632-711)||(25250321-25250401)
chr8 (621-765)||(33621340-33621478)
chr8 (615-689)||(12981605-12981679)
chr8 (634-700)||(37561513-37561579)
chr8 (613-699)||(40607332-40607418)
chr8 (626-708)||(44947372-44947453)
chr8 (613-722)||(18131203-18131311)
chr8 (588-713)||(39534107-39534231)
chr8 (634-690)||(12201835-12201891)
chr8 (634-690)||(12446263-12446319)
chr8 (629-741)||(18647470-18647581)
chr8 (638-722)||(44655252-44655336)
chr8 (613-700)||(4989728-4989815)
chr8 (629-763)||(31330970-31331105)
chr8 (616-657)||(40604241-40604282)
[»] chr3 (33 HSPs)
chr3 (613-756)||(49261757-49261900)
chr3 (616-737)||(44698214-44698335)
chr3 (615-722)||(4020109-4020216)
chr3 (586-730)||(6785760-6785905)
chr3 (634-763)||(48338783-48338912)
chr3 (620-720)||(29032425-29032525)
chr3 (585-764)||(42437681-42437858)
chr3 (633-736)||(50958857-50958960)
chr3 (615-741)||(635700-635826)
chr3 (613-764)||(38359016-38359167)
chr3 (611-741)||(11676727-11676857)
chr3 (626-742)||(54801336-54801452)
chr3 (613-730)||(28709559-28709676)
chr3 (651-763)||(4128724-4128836)
chr3 (586-765)||(44291197-44291374)
chr3 (627-730)||(55446736-55446838)
chr3 (620-730)||(12109653-12109763)
chr3 (621-762)||(34145906-34146046)
chr3 (616-720)||(8326151-8326254)
chr3 (615-689)||(1711919-1711993)
chr3 (253-321)||(18391942-18392010)
chr3 (615-730)||(26613060-26613176)
chr3 (646-730)||(31494031-31494115)
chr3 (634-730)||(25319466-25319562)
chr3 (634-721)||(2379619-2379705)
chr3 (621-700)||(25958060-25958139)
chr3 (675-730)||(53818829-53818884)
chr3 (247-310)||(54697932-54697995)
chr3 (588-641)||(27144092-27144145)
chr3 (627-686)||(3215088-3215147)
chr3 (613-715)||(15671110-15671212)
chr3 (662-716)||(37043028-37043082)
chr3 (619-715)||(17109533-17109630)
[»] chr2 (35 HSPs)
chr2 (613-763)||(40574136-40574286)
chr2 (590-743)||(13717168-13717320)
chr2 (616-724)||(40346717-40346825)
chr2 (615-724)||(23453353-23453463)
chr2 (618-730)||(4978750-4978862)
chr2 (614-738)||(6462586-6462709)
chr2 (618-730)||(13738393-13738505)
chr2 (618-730)||(18717853-18717965)
chr2 (615-763)||(41436295-41436443)
chr2 (588-754)||(4557550-4557717)
chr2 (626-730)||(4996666-4996770)
chr2 (616-738)||(1004771-1004892)
chr2 (615-700)||(4186405-4186490)
chr2 (629-730)||(38024190-38024290)
chr2 (614-764)||(8580481-8580631)
chr2 (588-720)||(1870462-1870593)
chr2 (650-754)||(6315866-6315970)
chr2 (586-768)||(3689585-3689765)
chr2 (243-322)||(8442616-8442695)
chr2 (615-730)||(18857437-18857552)
chr2 (619-735)||(32909404-32909523)
chr2 (588-715)||(19889763-19889891)
chr2 (654-722)||(27896474-27896542)
chr2 (585-692)||(13835877-13835984)
chr2 (616-714)||(3201134-3201232)
chr2 (636-730)||(28331270-28331364)
chr2 (686-743)||(42251597-42251654)
chr2 (613-720)||(7932884-7932991)
chr2 (615-730)||(42551958-42552072)
chr2 (671-722)||(43131810-43131861)
chr2 (241-319)||(3960856-3960934)
chr2 (588-669)||(36087407-36087488)
chr2 (610-730)||(43080296-43080415)
chr2 (616-730)||(17641177-17641291)
chr2 (248-278)||(37940462-37940492)
[»] chr1 (27 HSPs)
chr1 (587-756)||(46295838-46296007)
chr1 (615-766)||(13969094-13969245)
chr1 (613-740)||(26829485-26829612)
chr1 (588-741)||(8001715-8001868)
chr1 (615-743)||(33148126-33148254)
chr1 (622-720)||(10226464-10226562)
chr1 (587-720)||(27688492-27688625)
chr1 (616-743)||(17169266-17169393)
chr1 (590-720)||(11449073-11449203)
chr1 (585-700)||(48282856-48282971)
chr1 (621-763)||(32187024-32187165)
chr1 (666-756)||(34347556-34347646)
chr1 (617-739)||(30941466-30941588)
chr1 (613-721)||(52429639-52429748)
chr1 (615-720)||(40699263-40699368)
chr1 (615-720)||(49731157-49731262)
chr1 (653-724)||(38597489-38597560)
chr1 (613-720)||(39238844-39238951)
chr1 (637-774)||(8279695-8279832)
chr1 (615-665)||(39993446-39993496)
chr1 (616-741)||(50015771-50015896)
chr1 (623-730)||(30109229-30109337)
chr1 (698-739)||(17644831-17644872)
chr1 (593-689)||(11065840-11065936)
chr1 (621-715)||(40391218-40391313)
chr1 (618-700)||(48579929-48580011)
chr1 (646-687)||(15398275-15398316)
[»] chr4 (35 HSPs)
chr4 (587-736)||(12094955-12095104)
chr4 (613-765)||(27284040-27284192)
chr4 (618-740)||(2824814-2824936)
chr4 (610-764)||(31991448-31991602)
chr4 (610-730)||(12076418-12076538)
chr4 (613-765)||(48419041-48419193)
chr4 (234-321)||(8019961-8020048)
chr4 (613-735)||(13967842-13967965)
chr4 (634-741)||(28740277-28740384)
chr4 (611-768)||(20775037-20775194)
chr4 (613-714)||(31089778-31089878)
chr4 (652-720)||(19480550-19480618)
chr4 (648-768)||(39810731-39810850)
chr4 (616-763)||(28176746-28176892)
chr4 (631-719)||(44190235-44190321)
chr4 (589-741)||(52837233-52837388)
chr4 (627-719)||(2565418-2565510)
chr4 (618-721)||(22019615-22019718)
chr4 (598-720)||(22611875-22611998)
chr4 (597-711)||(7437806-7437920)
chr4 (585-730)||(27133552-27133697)
chr4 (618-722)||(19147146-19147250)
chr4 (610-721)||(51100016-51100128)
chr4 (615-730)||(16341097-16341212)
chr4 (588-739)||(41142262-41142413)
chr4 (616-699)||(45921335-45921418)
chr4 (697-766)||(36506747-36506816)
chr4 (634-722)||(30694297-30694382)
chr4 (621-703)||(31861429-31861511)
chr4 (650-714)||(44639887-44639951)
chr4 (631-714)||(37431793-37431876)
chr4 (613-720)||(55090794-55090900)
chr4 (627-737)||(55126785-55126896)
chr4 (241-278)||(7593144-7593181)
chr4 (242-299)||(8019528-8019585)
[»] chr5 (20 HSPs)
chr5 (585-763)||(22293954-22294131)
chr5 (615-741)||(11815903-11816029)
chr5 (613-743)||(27544579-27544709)
chr5 (618-730)||(30840596-30840707)
chr5 (618-740)||(30293821-30293943)
chr5 (616-712)||(36482072-36482168)
chr5 (586-722)||(14863347-14863483)
chr5 (615-712)||(14044677-14044772)
chr5 (620-693)||(18242479-18242552)
chr5 (590-762)||(8151765-8151940)
chr5 (618-733)||(41645034-41645147)
chr5 (614-720)||(1447548-1447654)
chr5 (613-715)||(2611141-2611244)
chr5 (613-691)||(6102870-6102948)
chr5 (654-735)||(6646286-6646367)
chr5 (675-763)||(7609595-7609682)
chr5 (580-763)||(8435027-8435210)
chr5 (654-724)||(1056818-1056888)
chr5 (585-691)||(12036273-12036379)
chr5 (614-664)||(34346951-34347001)
[»] scaffold0002 (1 HSPs)
scaffold0002 (614-756)||(120646-120788)
[»] chr6 (22 HSPs)
chr6 (620-730)||(5611129-5611239)
chr6 (615-741)||(32134038-32134164)
chr6 (613-763)||(227303-227455)
chr6 (615-730)||(19659610-19659724)
chr6 (587-763)||(31223165-31223330)
chr6 (588-720)||(33121279-33121411)
chr6 (611-720)||(2911458-2911567)
chr6 (234-322)||(21917346-21917434)
chr6 (585-730)||(2470354-2470499)
chr6 (621-722)||(10008204-10008304)
chr6 (613-730)||(17834969-17835086)
chr6 (648-721)||(18493255-18493328)
chr6 (588-720)||(19320239-19320372)
chr6 (661-735)||(8636785-8636859)
chr6 (621-730)||(17345843-17345952)
chr6 (615-763)||(30929465-30929615)
chr6 (671-722)||(27082322-27082373)
chr6 (618-720)||(12677833-12677935)
chr6 (589-693)||(17453942-17454046)
chr6 (634-688)||(2613366-2613420)
chr6 (241-311)||(18239246-18239315)
chr6 (616-701)||(2398040-2398125)
[»] scaffold0204 (1 HSPs)
scaffold0204 (616-768)||(15362-15514)
[»] scaffold0039 (1 HSPs)
scaffold0039 (621-721)||(29988-30088)
[»] scaffold0329 (1 HSPs)
scaffold0329 (616-694)||(7398-7475)
[»] scaffold0079 (1 HSPs)
scaffold0079 (615-730)||(51649-51764)
[»] scaffold0036 (1 HSPs)
scaffold0036 (597-700)||(36565-36668)
[»] scaffold0283 (1 HSPs)
scaffold0283 (626-708)||(3350-3432)
[»] scaffold0006 (1 HSPs)
scaffold0006 (588-712)||(38822-38946)
[»] scaffold0299 (1 HSPs)
scaffold0299 (618-740)||(18014-18137)
[»] scaffold1372 (1 HSPs)
scaffold1372 (585-659)||(1237-1310)
[»] scaffold0957 (1 HSPs)
scaffold0957 (627-725)||(1921-2018)
[»] scaffold0236 (1 HSPs)
scaffold0236 (241-299)||(16928-16986)
[»] scaffold0117 (1 HSPs)
scaffold0117 (628-722)||(16838-16932)


Alignment Details
Target: chr7 (Bit Score: 495; Significance: 0; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 234 - 830
Target Start/End: Complemental strand, 43119298 - 43118709
Alignment:
Q  234 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactccttactcattc 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |    
T  43119298 aaatatatgcatttatatcatgtatttactacaaaactatagtaatgaatgttgccatttattttaaaaaatggagagaatctcaactcctt-------c 43119206  T
Q  334 aaagaaataaaactcactactctcacaaataatccggccactcttcttcgcattcaatttcgttgttttcgtatacaccgactcactcaacattgctact 433  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43119205 aaagaaataaaactcgctactctcagtaataatccggccactcttcttcgcattcaatttcgttgtttttgtatacaccgactcactcaacattgctact 43119106  T
Q  434 tttgcttcttcctttctttgtattgttatgatatgattcaaaacaatatataaggaaacacacttgacataacatcactcgttgatataaatggacacat 533  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||    
T  43119105 tttgcttcttcctttctttgtattgttatgatatgattcaaaacaatatatgaggaaacacatttgacataacatcactcgttgatataaatggacatat 43119006  T
Q  534 ggctagtgatcttaaaatcaatgaagcttcgattgtgctttatagataaagaaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctac 633  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43119005 ggctagtgattttaaaatcaatgaagattcgattgtgctttatagataaagaaagggtcttgttaaccggtgcctccagggcaatggttaagaaatctac 43118906  T
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 733  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  43118905 aaatataaattttgtcttgaaaatatgagatgttacatttgatcaaatagtaattacgcaattttttcattaaaacttacttgttttggatgattaagca 43118806  T
Q  734 ttgcccttgaagcactggttaaccttctccataaagaaatgattatcgccaaggagtatgaagaaaattaacaaagtggctcttctctctccctttg 830  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43118805 ttgcccttgaagcacttgttaaccttctccataaagaaatgattatcgccaaggagtatgaagaaaatttacaaagtggctcttctctctccctttg 43118709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 43119771 - 43119647
Alignment:
Q  114 gattcaggtctggtaggtgggcacgacgatcatcattcatcaatgttttattcacgagtgtagatcatctctattacttaataaaaatggcaatatcaat 213  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43119771 gattcaggtctggtaggtgggcacgacgatcatcattcataaatgttttattcacgagtgtagatcatttctattacttaataaaaatggcaatatcaat 43119672  T
Q  214 tcttatag-tttcttgtgtataaat 237  Q
    |||||||| ||| ||||||||||||    
T  43119671 tcttatagtttttttgtgtataaat 43119647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 43119545 - 43119461
Alignment:
Q  114 gattcaggtctggtaggtgggcacgacgatcatcattcatcaatgttttattcacgagtgtagatcatctctattacttaataaa 198  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43119545 gatttaggtctggtaggtgggcacgaccatcatcattcatcaatgttttattcacgagtgtagatcatctctattacttaataaa 43119461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 616 - 741
Target Start/End: Complemental strand, 16980059 - 16979934
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||  ||| ||||| |||||||| |||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||    
T  16980059 aatggttaaagaatttacaattagaaattttgtcttgaaaatataagatgttacttttgatcgagtaataatcacacaactttttcataaaaatttactt 16979960  T
Q  716 gttttggatgattaagcattgccctt 741  Q
    |||||||||| |||| || |||||||    
T  16979959 gttttggatgcttaaccaatgccctt 16979934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 586 - 766
Target Start/End: Complemental strand, 19677142 - 19676962
Alignment:
Q  586 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 685  Q
    |||||||||| |||||  ||||  || |||| |||||||| |||| ||||||||||||| |||||||||||||| ||||||||| |||||| |||||||     
T  19677142 aagggtcttgctaaccaatgccctcagggcattggttaaggaatcgacaaatagaaattttgtcttgaaaatataagatgttacttttgattaagtaatg 19677043  T
Q  686 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 766  Q
    |||||||| ||||| ||  ||||||| ||||||| ||||| |||| || ||||||||  ||||| |||| | |||||||||    
T  19677042 attacacaccttttacaccaaaacttgcttgtttaggatgcttaaccaatgcccttggggcactagttagcattctccata 19676962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 613 - 763
Target Start/End: Original strand, 23142646 - 23142796
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac-tttttcattaaaactt 711  Q
    ||||||| |||| ||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||||| |||||||||| |||||||| |||||||    
T  23142646 ggcaatgattaataaatctacaaatagaaattttgt-ttggaaatataagatgttatttttgatcaagtaattattacacaacttttttcataaaaactt 23142744  T
Q  712 acttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    |||| ||||||||| |||| || ||| |||||  |||| |||||| ||||||    
T  23142745 acttattttggatgtttaaccaatgctcttgagacactcgttaacattctcc 23142796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 640 - 764
Target Start/End: Original strand, 34993148 - 34993272
Alignment:
Q  640 aaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgccc 739  Q
    ||||| |||||| ||||||| ||||||||| |||||| || ||||||||||||||||||||||| |||||||||||| ||| |||| |||| |||||| |    
T  34993148 aaattttgtcttaaaaatataagatgttacttttgataaaataataattacacaactttttcatgaaaacttacttgatttagatgcttaatcattgctc 34993247  T
Q  740 ttgaagcactggttaaccttctcca 764  Q
    ||   |||||||||||| |||||||    
T  34993248 ttagggcactggttaacattctcca 34993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 627 - 720
Target Start/End: Original strand, 8896605 - 8896698
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    |||||||||||| ||||| |||||| ||||||| ||||||||| |||||||| ||||| ||||||||| |||||||| ||||||||||||||||    
T  8896605 aatctacaaatataaattttgtcttaaaaatataagatgttacttttgatcaggtaatgattacacaattttttcatgaaaacttacttgtttt 8896698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 614 - 743
Target Start/End: Complemental strand, 37928419 - 37928290
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 713  Q
    |||||||||||  |||||| ||||| ||||| | |||||||||||| | ||||||  |||||| ||||||| ||||||||||||||| || |||||||||    
T  37928419 gcaatggttaaagaatctataaatataaattttatcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaaacttac 37928320  T
Q  714 ttgttttggatgattaagcattgcccttga 743  Q
    || ||||||||| |||| || || ||||||    
T  37928319 ttattttggatgtttaaccaatgtccttga 37928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 618 - 708
Target Start/End: Original strand, 18220984 - 18221074
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 708  Q
    |||||||| ||||||| ||||||| || || |||| |||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  18220984 tggttaaggaatctactaatagaagttttgacttggaaatataagatgttacatttgattaagtaataattatacaactttttcataaaaa 18221074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 634 - 747
Target Start/End: Original strand, 25530559 - 25530672
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 733  Q
    ||||||||||| | ||||  |||||| | |||||||||||||| ||||||| ||||||||| |||||||| |||||||| |||||||||||| | || ||    
T  25530559 aaatagaaattttatcttagaaatataaaatgttacatttgataaagtaatgattacacaattttttcataaaaacttatttgttttggatgctgaacca 25530658  T
Q  734 ttgcccttgaagca 747  Q
    || | |||||||||    
T  25530659 ttactcttgaagca 25530672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 623 - 741
Target Start/End: Complemental strand, 30028076 - 30027956
Alignment:
Q  623 aagaaatctacaaatagaaattctgtcttgaaaatatg--agatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||||||||||  |||||||| |||| |||||||||   ||||||||| |||||| ||||||| || ||||||||||||||| ||| |||||||||| |    
T  30028076 aagaaatctacagttagaaattttgtcatgaaaatatataagatgttacttttgataaagtaatgatcacacaactttttcatgaaatcttacttgttat 30027977  T
Q  721 ggatgattaagcattgccctt 741  Q
    ||||| |||| |||| |||||    
T  30027976 ggatgtttaaccattaccctt 30027956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 763
Target Start/End: Original strand, 12810154 - 12810289
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 726  Q
    |||||| ||||  ||||| |||||| ||||||| |||| |||| |||||  |||||||||||||||||||||||||| ||| | | |||||||| ||||     
T  12810154 aatctataaatgaaaattttgtcttaaaaatataagatattacttttgacaaagtaataattacacaactttttcatgaaagcatgcttgttttagatgt 12810253  T
Q  727 ttaagcattgcccttgaagcactggttaaccttctcc 763  Q
    |||| ||||||||||| | ||| ||||||| ||||||    
T  12810254 ttaaccattgcccttgga-caccggttaacattctcc 12810289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 730
Target Start/End: Complemental strand, 16685853 - 16685734
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttaca-tttgatcaagtaataattacacaacttttt-cattaaaact 710  Q
    |||| |||||||| ||||||| ||||||| || ||||||  |||||| |||||||||  |||||||||||||| |||||||||||||||  || ||||||    
T  16685853 ggcattggttaaggaatctactaatagaagttttgtctttgaaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaact 16685754  T
Q  711 tacttgttttggatgattaa 730  Q
    ||||| ||||||||| ||||    
T  16685753 tacttattttggatgcttaa 16685734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 730
Target Start/End: Complemental strand, 17660089 - 17659970
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttaca-tttgatcaagtaataattacacaacttttt-cattaaaact 710  Q
    |||| |||||||| ||||||| ||||||| || ||||||  |||||| |||||||||  |||||||||||||| |||||||||||||||  || ||||||    
T  17660089 ggcattggttaaggaatctactaatagaagttttgtctttgaaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaact 17659990  T
Q  711 tacttgttttggatgattaa 730  Q
    ||||| ||||||||| ||||    
T  17659989 tacttattttggatgcttaa 17659970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 735
Target Start/End: Complemental strand, 43626464 - 43626345
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||| ||||||||||| |||||| ||||| ||||||||||| || ||||||||  ||| || ||||||||||||||||| |||||||| |||| ||| ||    
T  43626464 aatgattaagaaatcttcaaataaaaattttgtcttgaaaaaattagatgttattttttataaagtaataattacacaattttttcataaaaatttattt 43626365  T
Q  716 gttttggatgattaagcatt 735  Q
     |||| |||| |||| ||||    
T  43626364 attttagatgtttaaccatt 43626345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 586 - 720
Target Start/End: Complemental strand, 8746282 - 8746149
Alignment:
Q  586 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 685  Q
    ||||||||||||||| ||| |   ||||||| |||||||| || |||| |||| ||||| ||||||| ||||||   ||||||| ||||||||| ||||     
T  8746282 aagggtcttgttaactggtactctcaaggcattggttaaggaa-ctactaataaaaattttgtcttgtaaatatagaatgttacttttgatcaaataatg 8746184  T
Q  686 attacacaactttttcattaaaacttacttgtttt 720  Q
    |||| ||||||||||||| ||||||||||| ||||    
T  8746183 attatacaactttttcataaaaacttacttatttt 8746149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 591 - 764
Target Start/End: Original strand, 31850719 - 31850893
Alignment:
Q  591 tcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattac 690  Q
    ||||| |||||||||||  ||  ||||||||||| ||||| | ||||| ||||| ||||||  |||||| ||||||||| ||| || || |||| |||||    
T  31850719 tcttgctaaccggtgccctcagagcaatggttaaaaaatccataaataaaaattttgtcttagaaatataagatgttacttttaataaaataatgattac 31850818  T
Q  691 acaactttttcat-taaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 764  Q
    | || ||||||||  |||||||||||||||| |||| |||| |||| || ||| ||||||  ||||| |||||||    
T  31850819 ataattttttcataaaaaacttacttgttttagatgcttaaccattacctttggagcactaattaacattctcca 31850893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 615 - 742
Target Start/End: Original strand, 1521199 - 1521323
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    |||||||||||||||||||| ||||||| ||| ||||| || ||| | ||||||| ||||||  |   || ||||| ||| ||||||||  |||||||||    
T  1521199 caatggttaagaaatctacagatagaaagtctttcttggaattataaaatgttacttttgataca---atgattacgcaattttttcatggaaacttact 1521295  T
Q  715 tgttttggatgattaagcattgcccttg 742  Q
    ||||||||||| |||| |||||||||||    
T  1521296 tgttttggatgtttaaccattgcccttg 1521323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 616 - 730
Target Start/End: Original strand, 1309720 - 1309834
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||| |||||||||||||||||| | |||| ||||||| | | ||||| ||| ||||| |||  ||||||||| |||||||| |||| ||| ||    
T  1309720 aatggttaaggaatctacaaatagaaattttatcttaaaaatataatacgttactttttatcaaataactattacacaattttttcataaaaatttattt 1309819  T
Q  716 gttttggatgattaa 730  Q
     ||||||||| ||||    
T  1309820 attttggatgtttaa 1309834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 730
Target Start/End: Original strand, 41064292 - 41064415
Alignment:
Q  611 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatg----agatgttacatttgatcaagtaataattacacaactttttcattaa 706  Q
    |||| ||||||||||  || || ||||||||||| | ||||||||||||     ||||||||| ||||||||||||||  ||| |||||||||| |||||    
T  41064292 aaggtaatggttaagggatttataaatagaaattttatcttgaaaatatatataagatgttacttttgatcaagtaatggttagacaacttttttattaa 41064391  T
Q  707 aacttacttgttttggatgattaa 730  Q
    |||||| || ||||||||| ||||    
T  41064392 aacttatttattttggatgcttaa 41064415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 730
Target Start/End: Original strand, 31487725 - 31487820
Alignment:
Q  635 aatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
    |||||||||| | ||||| |||||| ||||||||  ||| || ||||||||||||||||| |||||| | |||||||| || ||||||||| ||||    
T  31487725 aatagaaattttatcttggaaatataagatgttattttttattaagtaataattacacaattttttcttaaaaacttatttattttggatgtttaa 31487820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 668
Target Start/End: Original strand, 34993091 - 34993146
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgtta 668  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||    
T  34993091 ggcaatggttaaggaatctacaaatataaattttgtcttgaaaatataagatgtta 34993146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 720
Target Start/End: Original strand, 26241575 - 26241705
Alignment:
Q  590 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 689  Q
    |||||| | ||||||||||  | |||||||||||||||||| | || ||||| || ||| ||| |||  | | ||||||||||||||||| |||||||||    
T  26241575 gtcttgcttaccggtgccttaagggcaatggttaagaaatccaaaagtagaagttttgttttggaaacgtaatatgttacatttgatcaaataataatta 26241674  T
Q  690 cacaactttttcattaaaacttacttgtttt 720  Q
     || |||||||  | |||| |||||||||||    
T  26241675 tactactttttattaaaaagttacttgtttt 26241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 730
Target Start/End: Complemental strand, 42888433 - 42888306
Alignment:
Q  603 gtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttca 702  Q
    ||||| |||||  |||||||||| |||||||||||| |  || |  ||||||||||| ||||||| | |||||| ||||||| ||| ||||| ||||  |    
T  42888433 gtgcccccaagataatggttaaggaatctacaaataaattttttaacttgaaaatataagatgttgcttttgataaagtaatgattgcacaaattttcta 42888334  T
Q  703 ttaaaacttacttgttttggatgattaa 730  Q
    | ||||||||||| |||| |||| ||||    
T  42888333 tgaaaacttacttattttagatgtttaa 42888306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 590 - 684
Target Start/End: Complemental strand, 18757006 - 18756912
Alignment:
Q  590 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    |||||| ||||| |||||  || |||| || ||||| |||||||||||||||||| ||||||| |||||  |  |||||| ||||||||||||||    
T  18757006 gtcttgctaaccagtgccctcatggcattgattaaggaatctacaaatagaaattttgtcttgcaaataaaatgtgttacttttgatcaagtaat 18756912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 678
Target Start/End: Complemental strand, 31249622 - 31249568
Alignment:
Q  624 agaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatca 678  Q
    ||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||||    
T  31249622 agaaatctataaatataaattttgtcttgaaaatataagatgttacttttgatca 31249568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 720
Target Start/End: Original strand, 45907033 - 45907134
Alignment:
Q  619 ggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtt 718  Q
    ||||||| |||||| |||||||  || ||||||| |||||| |  ||| || ||| |||||||||||||||||  ||||||| || ||||||||||| ||    
T  45907033 ggttaaggaatctataaatagattttttgtcttgtaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaacttacttctt 45907132  T
Q  719 tt 720  Q
    ||    
T  45907133 tt 45907134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 615 - 699
Target Start/End: Original strand, 39786447 - 39786531
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 699  Q
    ||||||||||| |||||| |||||||||   |||||||||||||| || | | || |||||| || |||||||||||| ||||||    
T  39786447 caatggttaaggaatctataaatagaaaacttgtcttgaaaatataagttttaacttttgattaaataataattacactactttt 39786531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 43119366 - 43119322
Alignment:
Q  196 aaaaatggcaatatcaattcttatag-tttcttgtgtataaatat 239  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  43119366 aaaaatggcaatatcaattcttatagtttttttgtgtataaatat 43119322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 49013049 - 49013085
Alignment:
Q  244 atttatatcatgtatttactacaaaactatagtaacg 280  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49013049 atttatatcatgtatttactacataactatagtaacg 49013085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 720
Target Start/End: Complemental strand, 21515131 - 21515032
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| |||||| ||||||||||| |  | ||||||||  ||||||||| ||| ||||| ||||||||||||| |||||  |  ||||||||||| ||||    
T  21515131 ttaaggaatctataaatagaaattttaacatgaaaatacaagatgttacttttaatcaaataataattacacaccttttaaaccaaaacttacttatttt 21515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 708
Target Start/End: Original strand, 23080658 - 23080713
Alignment:
Q  653 aaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 708  Q
    ||||||| ||||||||| |||||||||||||| |||||| || |||||||| ||||    
T  23080658 aaaatataagatgttacttttgatcaagtaatgattacataattttttcataaaaa 23080713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 716
Target Start/End: Original strand, 23317839 - 23317894
Alignment:
Q  661 agatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttg 716  Q
    ||||||||| ||||||||||| || ||||||| ||||||| || ||||||||||||    
T  23317839 agatgttacttttgatcaagttatgattacaccacttttttatgaaaacttacttg 23317894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 722
Target Start/End: Complemental strand, 24937976 - 24937843
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgtt-acatttgatcaagtaataa 686  Q
    |||||||| ||||| |||||  || ||||||||||||| || ||| ||||||||| | ||| || ||||||| |||| || || ||| || |||||||||    
T  24937976 gggtcttgctaaccagtgccctcagggcaatggttaaggaaactataaatagaaaatttgttttaaaaatat-agattttgacttttaattaagtaataa 24937878  T
Q  687 ttacacaactttttcattaaaacttacttgttttgg 722  Q
    |||||| ||||||| || |||| |||||| ||||||    
T  24937877 ttacaccacttttt-ataaaaagttacttattttgg 24937843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 621 - 691
Target Start/End: Original strand, 18037851 - 18037921
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca 691  Q
    |||||||||| | ||||| ||||| ||| |||||||||| |  |||||| ||||||||| |||||||||||    
T  18037851 ttaagaaatccataaataaaaattttgttttgaaaatataaattgttacttttgatcaaataataattaca 18037921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 460 - 562
Target Start/End: Original strand, 39773168 - 39773270
Alignment:
Q  460 tatgatatgattcaaaacaatatataaggaaacacacttgacataacatcactcgttgatataaatggacacatggctagtgatcttaaaatcaatgaag 559  Q
    |||| ||||||||||||  | ||||||||||  |||| || |||||||| | | ||||| | |||||||||  |||||||||||| |||||| || ||||    
T  39773168 tatgttatgattcaaaatgacatataaggaattacacatggcataacataattggttgagaaaaatggacatgtggctagtgatcctaaaattaaggaag 39773267  T
Q  560 ctt 562  Q
    |||    
T  39773268 ctt 39773270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 613 - 763
Target Start/End: Original strand, 41760332 - 41760482
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||  || ||| ||||||||||| |||||| ||||| | || | |||  ||| |||||||||| ||||||||||||||| || ||| ||||    
T  41760332 ggcactggttaaagaaactaaaaatagaaattatgtcttaaaaatgtaagtttttattttttatcaagtaattattacacaactttttaataaaatctta 41760431  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
     |  ||||||||| |||| || || || |||| ||||  ||||| ||||||    
T  41760432 ttctttttggatgcttaaccaatgtccatgaaacactatttaacattctcc 41760482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 763
Target Start/End: Original strand, 7833770 - 7833887
Alignment:
Q  646 tgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaag 745  Q
    |||||||||||||| |  |||||  ||||| ||| |||| ||| ||| ||||||| || ||| |||||||||||||| || |||| || |||||| |  |    
T  7833770 tgtcttgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatcttacttgttttggctgcttaaccaatgccctcgggg 7833869  T
Q  746 cactggttaaccttctcc 763  Q
    || |||||||| ||||||    
T  7833870 cattggttaacattctcc 7833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 718
Target Start/End: Original strand, 47445349 - 47445454
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| ||||   ||||||||||| ||  |||||||||| || | |||| |||||| |||||||||||| || | ||||| || ||||||||    
T  47445349 ggcactggttaaggaatccttaaatagaaattttgctttgaaaatataagtttttacttttgatgaagtaataattaaactatttttttataaaaactta 47445448  T
Q  713 cttgtt 718  Q
    | ||||    
T  47445449 catgtt 47445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 613 - 742
Target Start/End: Original strand, 44648931 - 44649060
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||| |||||| ||||||| |||||||||||||||||| ||||||||    
T  44648931 ggcaatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttgataaagtaatgattacacaactttttcatgaaaactta 44649030  T
Q  713 cttgttttggatgattaagcattgcccttg 742  Q
     |||||||||||| |||| |||||||||||    
T  44649031 tttgttttggatgcttaatcattgcccttg 44649060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 585 - 725
Target Start/End: Complemental strand, 3137548 - 3137408
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||| ||||| |||||  || |||||||||||||||||  | ||||||||||| |||||||||||| | ||||||||| ||||||||||||||    
T  3137548 aaagggtcttgctaaccagtgccctcagggcaatggttaagaaattcagaaatagaaattttgtcttgaaaatgtaagatgttacttttgatcaagtaat 3137449  T
Q  685 aattacacaactttttcattaaaacttacttgttttggatg 725  Q
     ||||||||||||||||||  ||||||| ||||||||||||    
T  3137448 tattacacaactttttcatataaacttatttgttttggatg 3137408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 614 - 730
Target Start/End: Complemental strand, 10029281 - 10029165
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 713  Q
    ||||||||||||||||||||||||| ||||| | ||||| |||||| ||||||||| |||||||||||||| |||| ||||||||||||| |||| ||||    
T  10029281 gcaatggttaagaaatctacaaataaaaattttatcttggaaatataagatgttacttttgatcaagtaatgattatacaactttttcataaaaatttac 10029182  T
Q  714 ttgttttggatgattaa 730  Q
    ||| |||||||| ||||    
T  10029181 ttgatttggatgcttaa 10029165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 587 - 764
Target Start/End: Complemental strand, 20542533 - 20542356
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||| ||| | |||||  || |||| |||||||| ||||||||||||||||||  |||||| |||||| ||||||||| |||||| ||||||| |    
T  20542533 agggtcttgctaaacagtgccctcagggcattggttaaggaatctacaaatagaaatttcgtcttggaaatataagatgttacttttgattaagtaatga 20542434  T
Q  687 ttacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 764  Q
    |||||||  |||||| | |||||||||| |||||||||| |||| || ||||||||  |||| ||||| | |||||||    
T  20542433 ttacacacttttttcttaaaaacttactcgttttggatgcttaaccaatgcccttggggcacgggttagcattctcca 20542356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 613 - 755
Target Start/End: Complemental strand, 600492 - 600350
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||| ||||| |||||||||||| |  || || |||| |||||| ||||||||| |||||| ||||||| ||| |||||||||||||| ||||||||    
T  600492 ggcaatgattaaggaatctacaaataaattttttggcttggaaatataagatgttacttttgataaagtaatgattgcacaactttttcatgaaaactta 600393  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaa 755  Q
     ||||||| |||| |||| |||||| |||| ||||||||||||    
T  600392 tttgttttagatgtttaaccattgcacttggagcactggttaa 600350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 616 - 730
Target Start/End: Original strand, 18200677 - 18200791
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||| | ||||||| |||||| ||||||| ||||||||| |||||||| ||| |||||||    
T  18200677 aatggttaagaaatctacaaataaaaattttgtcttaaaaatataacatgttacttttgattaagtaatgattacacaattttttcataaaagcttactt 18200776  T
Q  716 gttttggatgattaa 730  Q
     ||||||||| ||||    
T  18200777 attttggatgcttaa 18200791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 616 - 730
Target Start/End: Original strand, 35901412 - 35901526
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||| |||||||||||||||||| ||| |||||||| | ||||||||| ||| || || |||| ||| |||||||||||||| |||||||||||    
T  35901412 aatggttaaggaatctacaaatagaaattttgttttgaaaatgtaagatgttacttttaattaaataatgattgcacaactttttcataaaaacttactt 35901511  T
Q  716 gttttggatgattaa 730  Q
    |||||||||| ||||    
T  35901512 gttttggatgcttaa 35901526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 615 - 699
Target Start/End: Original strand, 3347506 - 3347590
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 699  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||| || ||||||||||||||||||||||    
T  3347506 caatggttaagaaatctacaaataaaaattttgtcttgaaaatataagatgttacttttaataaagtaataattacacaactttt 3347590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 25105711 - 25105797
Alignment:
Q  236 atatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 322  Q
    |||| |||||||||||  ||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||| |||||||||||    
T  25105711 atatgtgcatttatatagtgtatttactacaaaactatagtaatggatgttaccatttattttagaaaatggagataatctcaactc 25105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 587 - 724
Target Start/End: Original strand, 42361481 - 42361618
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||||||||||||| || || || |||||||||  ||||||  |||||||||| ||||||  |||||| |||||||   ||| || ||||||  |    
T  42361481 agggtcttgttaaccggtgtcttcagggtaatggttaaagaatctattaatagaaattttgtctttgaaatataagatgttcttttttataaagtaaaga 42361580  T
Q  687 ttacacaactttttcattaaaacttacttgttttggat 724  Q
    || |||||||||||||| ||||||||||||||||||||    
T  42361581 ttgcacaactttttcatgaaaacttacttgttttggat 42361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 618 - 763
Target Start/End: Original strand, 17720176 - 17720322
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||  |||||| ||||||||||  | |||||||||||| ||||||||  |||||||| ||||| |||||||||||||||||| |||||||  ||||    
T  17720176 tggttaaagaatctataaatagaaatattttcttgaaaatataagatgttatttttgatcatgtaatgattacacaactttttcatgaaaacttgtttgt 17720275  T
Q  718 tttggatgat--taagcattgcccttgaagcactggttaaccttctcc 763  Q
    |||||||| |  ||| || ||||||||  |||||||||||| ||||||    
T  17720276 tttggatgcttataaccaatgcccttg-ggcactggttaacattctcc 17720322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 587 - 766
Target Start/End: Complemental strand, 11151068 - 11150890
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||  |||||||||||  || ||||||| ||||| |||||||||||| || || ||||||  |||||| ||||||||| ||||||||| |||| |    
T  11151068 agggtcttcctaaccggtgccctcagggcaatgattaaggaatctacaaataaaatttttgtcttagaaatataagatgttacttttgatcaaataatga 11150969  T
Q  687 ttacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 766  Q
    |||||||| |||||  | ||||||||||| ||||| ||| |||| || |||||||   ||| |||||| | |||||||||    
T  11150968 ttacacaa-ttttttttaaaaacttacttattttgaatgcttaaccaatgcccttagggcagtggttagcattctccata 11150890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 592 - 742
Target Start/End: Original strand, 27506920 - 27507068
Alignment:
Q  592 cttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca 691  Q
    |||| |||| ||||||  |||| ||||||||||  |||||||||||| |||||  || ||| |||||| |||| |||| |||||| || |||||||||||    
T  27506920 cttgctaactggtgccctcaagacaatggttaaagaatctacaaataaaaatt--gttttggaaatataagatattacttttgataaaataataattaca 27507017  T
Q  692 caactttttcattaaaacttacttgttttggatgattaagcattgcccttg 742  Q
    |||||||||||| |||| ||||||||||| ||||  ||| ||||| |||||    
T  27507018 caactttttcatgaaaatttacttgttttagatgcgtaaccattgtccttg 27507068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 720
Target Start/End: Complemental strand, 547181 - 547075
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagat----gttacatttgatcaagtaataattacacaactttttcattaaaacttac 713  Q
    ||||||||||||   |||||||||||| | |||||||||||| ||||    ||||  ||||||||| ||||||||||||||||||||||||||||| |||    
T  547181 tggttaagaaattcgcaaatagaaattttatcttgaaaatataagataaatgttatttttgatcaaataataattacacaactttttcattaaaacgtac 547082  T
Q  714 ttgtttt 720  Q
    |||||||    
T  547081 ttgtttt 547075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 610 - 703
Target Start/End: Complemental strand, 18045406 - 18045313
Alignment:
Q  610 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat 703  Q
    |||||||||||||||  ||||||||| || ||||| |||||||||||||| | ||||||| |||| ||| ||||||||||||||| ||||||||    
T  18045406 caaggcaatggttaaagaatctacaactaaaaattttgtcttgaaaatataatatgttacttttgttcatgtaataattacacaattttttcat 18045313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 616 - 741
Target Start/End: Complemental strand, 41727013 - 41726888
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||| | ||||||  ||| || ||||||| |||||| |  |||||||| |||||||||||    
T  41727013 aatggttaaggaatctacaaataaaaattttgtcttggaaatataaaatgttattttttataaagtaatgattacatagttttttcataaaaacttactt 41726914  T
Q  716 gttttggatgattaagcattgccctt 741  Q
     |||| |||| |||| ||||||||||    
T  41726913 attttagatgcttaaccattgccctt 41726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 613 - 741
Target Start/End: Complemental strand, 40489969 - 40489842
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||||||||| ||||||||| || ||||| || |||| |||||| | |||||||  ||||| ||||||| |||||| ||||||||||| ||||||||    
T  40489969 ggcaatggttaaggaatctacaa-taaaaattttgccttgtaaatataaaatgttactattgataaagtaatgattacataactttttcataaaaactta 40489871  T
Q  713 cttgttttggatgattaagcattgccctt 741  Q
     ||||||| |||  |||| ||||||||||    
T  40489870 tttgttttagatatttaaccattgccctt 40489842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 763
Target Start/End: Complemental strand, 43917693 - 43917557
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 726  Q
    |||||||||||| || || |||||||||||||| ||  ||||| ||| ||||| |||||||||||||| ||||| || |||| ||||||||||||||||     
T  43917693 aatctacaaataaaatttttgtcttgaaaatataaggcgttacttttaatcaaataataattacacaatttttttataaaaatttacttgttttggatgc 43917594  T
Q  727 ttaagcattgcccttgaagcactggttaaccttctcc 763  Q
    |||| || |  |||| | |||||||||| | ||||||    
T  43917593 ttaaccaatatccttaatgcactggttagcattctcc 43917557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 720
Target Start/End: Original strand, 6270143 - 6270249
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||||| |||||| ||||||||| || ||||| ||||||| |||||| || |||||  |||||| ||||||| ||||||||||||||| || ||||||||    
T  6270143 ggcaatagttaaggaatctacaattaaaaattttgtcttggaaatataaggtgttat-tttgataaagtaatgattacacaacttttttatgaaaactta 6270241  T
Q  713 cttgtttt 720  Q
    ||||||||    
T  6270242 cttgtttt 6270249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 588 - 724
Target Start/End: Original strand, 23425231 - 23425371
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagat----gttacatttgatcaagtaa 683  Q
    ||||||||||||| ||||||  |   ||| ||||||||||||| | ||||| ||||| |||||  ||||||| ||||    ||||  ||||||||| |||    
T  23425231 gggtcttgttaactggtgccctcggtgcattggttaagaaatccataaataaaaattttgtctcaaaaatataagataaatgttatttttgatcaaataa 23425330  T
Q  684 taattacacaactttttcattaaaacttacttgttttggat 724  Q
    | |||||||||||||||||||||||| ||||||||||||||    
T  23425331 tgattacacaactttttcattaaaacgtacttgttttggat 23425371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 634 - 765
Target Start/End: Original strand, 34678221 - 34678351
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 733  Q
    ||||||||| | |||||||||||| | | ||||||| ||||||||||||||||||||| || ||||| ||||||| || ||||||||| ||| |||| ||    
T  34678221 aaatagaaaatttgtcttgaaaatgtaaaatgttacttttgatcaagtaataattacataa-ttttttattaaaagttgcttgttttgaatgcttaacca 34678319  T
Q  734 ttgcccttgaagcactggttaaccttctccat 765  Q
    ||||| ||| |||| | |||| | ||||||||    
T  34678320 ttgcctttggagcaatagttagcattctccat 34678351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 620 - 730
Target Start/End: Complemental strand, 32881226 - 32881116
Alignment:
Q  620 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 719  Q
    ||||||||||||||||||| ||||| |||||| ||||||| |||| |||  ||| ||||||| || |||||||||| ||||  | ||||||||||| |||    
T  32881226 gttaagaaatctacaaataaaaattttgtcttaaaaatataagatattattttttatcaagttatgattacacaacattttattaaaaacttacttattt 32881127  T
Q  720 tggatgattaa 730  Q
    |||||| ||||    
T  32881126 tggatgtttaa 32881116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 738
Target Start/End: Complemental strand, 1342427 - 1342317
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 726  Q
    ||||| |||||||||||| | ||||| |||||| ||||||||| |||||| ||  ||| ||||||||||||||| || ||||||||||| |||| ||||     
T  1342427 aatcttcaaatagaaattttatcttggaaatataagatgttacttttgataaac-aatgattacacaacttttttatgaaaacttacttattttagatgc 1342329  T
Q  727 ttaagcattgcc 738  Q
    |||| |||||||    
T  1342328 ttaaccattgcc 1342317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 679 - 754
Target Start/End: Original strand, 23725684 - 23725759
Alignment:
Q  679 agtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggtta 754  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||| |||| || |||||| |  ||||||||||    
T  23725684 agtaatgatcacacaactttttcatgaaaacttacttgttttggatgcttaaccaatgccctgggggcactggtta 23725759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 711
Target Start/End: Complemental strand, 25250401 - 25250321
Alignment:
Q  632 acaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttc-attaaaactt 711  Q
    ||||||||||||| |||||||||||||| | ||||||  |||||||||||||| |||  || |||||||| ||||||||||    
T  25250401 acaaatagaaattttgtcttgaaaatataatatgttatttttgatcaagtaatgattttaccactttttctattaaaactt 25250321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 765
Target Start/End: Complemental strand, 33621478 - 33621340
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| |||||||||||| ||||| |||||| ||||||| | || |||| |||||||||||||| |||  |||| |||     ||||| |||||||||||    
T  33621478 ttaaggaatctacaaataaaaattttgtcttaaaaatataaaattttacttttgatcaagtaattatt--acaatttt----ataaaatttacttgtttt 33621385  T
Q  721 ggatgattaagcattgcccttgaagcactggttaaccttctccat 765  Q
    ||||| |||| || |||||||| |||| || ||| | ||||||||    
T  33621384 ggatgtttaaccaatgcccttggagcattgattagcattctccat 33621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 689
Target Start/End: Complemental strand, 12981679 - 12981605
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 689  Q
    ||||||||||| |||  | || |||||||| |||||||||||| | ||||||||||||||| |||||||| ||||    
T  12981679 caatggttaaggaattcaaaattagaaattttgtcttgaaaatgtaagatgttacatttgaccaagtaatgatta 12981605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 700
Target Start/End: Original strand, 37561513 - 37561579
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 700  Q
    ||||||||||| | | |||||||||| |||| |||| ||||||||||||||||| |||||| |||||    
T  37561513 aaatagaaattttattttgaaaatataagattttacttttgatcaagtaataatcacacaatttttt 37561579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 613 - 699
Target Start/End: Complemental strand, 40607418 - 40607332
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 699  Q
    ||||||||||||||||| || ||||||||| | | |||| ||||||| || | | || |||||| ||||||||||||||| ||||||    
T  40607418 ggcaatggttaagaaatttataaatagaaaatttatcttaaaaatataagttttgacttttgattaagtaataattacactactttt 40607332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 626 - 708
Target Start/End: Complemental strand, 44947453 - 44947372
Alignment:
Q  626 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 708  Q
    ||||||| ||||| ||||| |||||||||||||| | ||||||| |||||| ||||| | |||| ||||||||||||| ||||    
T  44947453 aaatctataaataaaaatt-tgtcttgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 44947372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 722
Target Start/End: Complemental strand, 18131311 - 18131203
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||| |||||||||| | ||||||||| | |||||||||||||| || | | ||   |||| ||||||||||||||| || |||| || |||| |||    
T  18131311 ggcaatgattaagaaatccataaatagaaaatttgtcttgaaaatataagttttgactactgattaagtaataattacactac-ttttaataaaaagtta 18131213  T
Q  713 cttgttttgg 722  Q
    ||||||||||    
T  18131212 cttgttttgg 18131203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 713
Target Start/End: Original strand, 39534107 - 39534231
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||||||||||||||||||| ||  ||||  ||||||  |||||| || ||||| ||||||||||||||||| |  ||| ||  || |||||||||||||    
T  39534107 gggtcttgttaaccggtgcccccg-ggcatgggttaaagaatctataattagaatttctgtcttgaaaatataaactgtcaccctttatcaagtaataat 39534205  T
Q  688 tacacaactttttcattaaaacttac 713  Q
    ||||  ||||||| || |||| ||||    
T  39534206 tacattactttttaataaaaatttac 39534231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 634 - 690
Target Start/End: Complemental strand, 12201891 - 12201835
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattac 690  Q
    ||||||||||| ||||||| |||||| || |||||| |||||||||||| |||||||    
T  12201891 aaatagaaattttgtcttggaaatataagctgttacttttgatcaagtattaattac 12201835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 634 - 690
Target Start/End: Complemental strand, 12446319 - 12446263
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattac 690  Q
    ||||||||||| ||||||| |||||| || |||||| |||||||||||| |||||||    
T  12446319 aaatagaaattttgtcttggaaatataagctgttacttttgatcaagtattaattac 12446263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 741
Target Start/End: Original strand, 18647470 - 18647581
Alignment:
Q  629 tctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgatt 728  Q
    |||||||||||||||| | |||| ||||||| ||||||||  |||||| || | || ||||||||| ||||||||  ||| |||||||||||  ||| ||    
T  18647470 tctacaaatagaaattttatcttaaaaatataagatgtta-ttttgataaaatgatgattacacaattttttcatggaaatttacttgttttaaatgctt 18647568  T
Q  729 aagcattgccctt 741  Q
    || |||| |||||    
T  18647569 aaccattaccctt 18647581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 722
Target Start/End: Original strand, 44655252 - 44655336
Alignment:
Q  638 agaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 722  Q
    ||||||| ||||||| ||| || || ||||||| |||| |||||||||||||||| |||||||  | |||||||| || ||||||    
T  44655252 agaaattttgtcttggaaaaataagttgttacaattgaccaagtaataattacactactttttattaaaaacttatttattttgg 44655336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 700
Target Start/End: Complemental strand, 4989815 - 4989728
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 700  Q
    |||||||||||||||| ||| ||||| ||| | |||||||||||||| || | | |  ||||||||||||| ||||||| || |||||    
T  4989815 ggcaatggttaagaaaactataaataaaaaatttgtcttgaaaatataagttttgatttttgatcaagtaacaattacataatttttt 4989728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 763
Target Start/End: Complemental strand, 31331105 - 31330970
Alignment:
Q  629 tctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttt-ttcattaaaacttacttgttttggatgat 727  Q
    |||||||||||||||| | ||||  |||||| ||||||||| |||||||||  | | ||||||||||||| || |  || | || ||||||||||||| |    
T  31331105 tctacaaatagaaattttatcttcgaaatataagatgttacttttgatcaaacagtgattacacaactttctttaagaacatttgcttgttttggatgct 31331006  T
Q  728 taagcattgcccttgaagcactggttaaccttctcc 763  Q
    ||| || || ||||  | ||||||||||| ||||||    
T  31331005 taaccaatgtccttagaacactggttaacattctcc 31330970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 657
Target Start/End: Original strand, 40604241 - 40604282
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaat 657  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||    
T  40604241 aatggttaagaaatctacaaatataaattttgttttgaaaat 40604282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 4e-37; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 613 - 756
Target Start/End: Complemental strand, 49261900 - 49261757
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||||||| |||||||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||| |||||||| ||||  ||    
T  49261900 ggcactggttaagaaatatacaaatagaaattttgtcttgtaaatataagatgttacttttgatagagtaataattacacaattttttcatgaaaatgta 49261801  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaac 756  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||    
T  49261800 cttgttttggatgcttaaccattgctcttggagcactggttaac 49261757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 616 - 737
Target Start/End: Complemental strand, 44698335 - 44698214
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| || |||| ||||||||| |||||||| |||||||| ||    
T  44698335 aatggttaagaaatctacaaatagaaattttgtcttgaaaatataagatgttacttttgataaaataatgattacacaattttttcataaaaacttattt 44698236  T
Q  716 gttttggatgattaagcattgc 737  Q
    ||||| |||  |||| ||||||    
T  44698235 gttttagatatttaaccattgc 44698214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 615 - 722
Target Start/End: Complemental strand, 4020216 - 4020109
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| | ||||||  |||||| ||||||| ||||||||| |||||||| ||||||||||    
T  4020216 caatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaaacttact 4020117  T
Q  715 tgttttgg 722  Q
    ||||||||    
T  4020116 tgttttgg 4020109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 586 - 730
Target Start/End: Original strand, 6785760 - 6785905
Alignment:
Q  586 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 685  Q
    |||||| ||| ||||| |||||  || ||||||||||||| | ||||||||||||| || |||||||||||||| | ||||||| ||||||||||||||     
T  6785760 aagggtattgctaaccagtgccctcagggcaatggttaaggattctacaaatagaatttttgtcttgaaaatataaaatgttacttttgatcaagtaatg 6785859  T
Q  686 attacacaac-tttttcattaaaacttacttgttttggatgattaa 730  Q
    |||||||| | |||||||| ||||||| |||||||| |||| ||||    
T  6785860 attacacatcttttttcatgaaaacttgcttgtttttgatgtttaa 6785905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 634 - 763
Target Start/End: Complemental strand, 48338912 - 48338783
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 733  Q
    ||||||||||| | ||||| |||||| ||||||||  |||||| ||||||| ||||||||||||||| || ||||||||||||||||||||| |||| ||    
T  48338912 aaatagaaattttatcttggaaatataagatgttatttttgataaagtaattattacacaacttttttataaaaacttacttgttttggatgcttaacca 48338813  T
Q  734 ttgcccttgaagcactggttaaccttctcc 763  Q
    ||||||||  |||||| |||| | ||||||    
T  48338812 ttgcccttagagcactagttagcattctcc 48338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 620 - 720
Target Start/End: Complemental strand, 29032525 - 29032425
Alignment:
Q  620 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 719  Q
    |||||| | |||||||| ||||||| |||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  29032525 gttaaggattctacaaacagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcataaaaacttgcttgttt 29032426  T
Q  720 t 720  Q
    |    
T  29032425 t 29032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 585 - 764
Target Start/End: Original strand, 42437681 - 42437858
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||| ||||| |||||  || ||||||||||||| | |||||||||||||||| | ||||| || ||| ||||||||| |||||||  |||||    
T  42437681 aaagggtcttgataaccagtgccctcagggcaatggttaaggattctacaaatagaaattttatcttggaattataagatgttacttttgatc--gtaat 42437778  T
Q  685 aattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 764  Q
     |||||| ||||||||||| |||  || | ||||||||||| |||| || ||||||||  |||||||||| | |||||||    
T  42437779 gattacataactttttcataaaattttgcgtgttttggatgcttaaccaatgcccttggggcactggttagcattctcca 42437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 633 - 736
Target Start/End: Complemental strand, 50958960 - 50958857
Alignment:
Q  633 caaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagc 732  Q
    |||||||||||| ||||||| |||||| | ||||||  |||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  50958960 caaatagaaattttgtcttggaaatataacatgttatttttgatcaagaaatgattacacaattttttcataaaaacttacttgttttggatgcttaagc 50958861  T
Q  733 attg 736  Q
    ||||    
T  50958860 attg 50958857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 615 - 741
Target Start/End: Original strand, 635700 - 635826
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| |||||||||||||||||| ||||||||| | || ||||||||| |||||| || |||| ||||||||||||||  || ||||||||      
T  635700 caatggttaaggaatctacaaatagaaattttgtcttgaataaataagatgttacttttgattaaataatgattacacaacttttcaataaaaacttata 635799  T
Q  715 tgttttggatgattaagcattgccctt 741  Q
    ||||||||||| |||| || |||||||    
T  635800 tgttttggatgcttaaccaatgccctt 635826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 613 - 764
Target Start/End: Complemental strand, 38359167 - 38359016
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||||||||| |||||| ||||| ||||| | ||||  |||||| ||||||||  |||||| ||||||  ||||| || ||||||||| ||||||||    
T  38359167 ggcaatggttaaggaatctataaataaaaattttatcttagaaatataagatgttaattttgataaagtaacgattacccatctttttcatgaaaactta 38359068  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 764  Q
    ||| |||| |||| |||| |||||||||||| ||| | |||||| |||||||    
T  38359067 cttattttagatgtttaaccattgcccttgaggcattagttaacattctcca 38359016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 611 - 741
Target Start/End: Original strand, 11676727 - 11676857
Alignment:
Q  611 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaact 710  Q
    |||||| || ||||| |||||||||||| ||||| |||||||||||||  ||| ||||| ||||||||| |||| || |||||| |||||| | ||||||    
T  11676727 aaggcattgattaaggaatctacaaatataaattttgtcttgaaaataaaagacgttacttttgatcaaataatgataacacaattttttcttgaaaact 11676826  T
Q  711 tacttgttttggatgattaagcattgccctt 741  Q
    | ||||||||||||| |||| || |||||||    
T  11676827 tgcttgttttggatgtttaaccaatgccctt 11676857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 626 - 742
Target Start/End: Original strand, 54801336 - 54801452
Alignment:
Q  626 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 725  Q
    ||||||||| ||| ||| | | |||||||||||| ||||||||| |||| | ||||||||||||||||| |||||||| ||||||||||| ||||| |||    
T  54801336 aaatctacatataaaaaatttatcttgaaaatataagatgttacttttgctaaagtaataattacacaattttttcataaaaacttacttattttgtatg 54801435  T
Q  726 attaagcattgcccttg 742  Q
     ||||  ||||||||||    
T  54801436 cttaactattgcccttg 54801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 613 - 730
Target Start/End: Original strand, 28709559 - 28709676
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||||||||  |||||| ||||||||||| | |||||||||||| | ||||||| ||||||||| |||| |||| |||||||||| ||  |||||||    
T  28709559 ggcaatggttaaagaatctataaatagaaattttatcttgaaaatataaaatgttacttttgatcaaataatgattatacaacttttttatagaaactta 28709658  T
Q  713 cttgttttggatgattaa 730  Q
    ||| ||||| ||| ||||    
T  28709659 cttattttgaatgcttaa 28709676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 651 - 763
Target Start/End: Original strand, 4128724 - 4128836
Alignment:
Q  651 tgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactg 750  Q
    ||||||||| |||| |||  |||||| ||||||| |||||||||  ||||||| ||||||||||||||||||||| |||| |||||||||||  |||| |    
T  4128724 tgaaaatataagatattatttttgataaagtaatgattacacaatattttcatgaaaacttacttgttttggatgcttaaccattgcccttggggcaccg 4128823  T
Q  751 gttaaccttctcc 763  Q
    |||| | ||||||    
T  4128824 gttagcattctcc 4128836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 586 - 765
Target Start/End: Original strand, 44291197 - 44291374
Alignment:
Q  586 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 685  Q
    |||||||||||||||| ||||| ||  |||| |||||||| |||||| |||||||| |||||||||| |||||| |  ||| || ||| || ||||||||    
T  44291197 aagggtcttgttaaccagtgcc-ccggggcactggttaaggaatctataaatagaatttctgtcttggaaatataaactgtcactttttattaagtaata 44291295  T
Q  686 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccat 765  Q
    ||||||  ||||||| || || |||||||| |||||| || |||| || |||||  |  |||||||||||| ||||||||    
T  44291296 attacattactttttaataaatacttacttcttttgg-tgcttaaccaatgccccgggggcactggttaacattctccat 44291374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 730
Target Start/End: Complemental strand, 55446838 - 55446736
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 726  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||| ||| || ||||||| ||||||||||||||| || ||||||||||| |||| ||||     
T  55446838 aatctacaaataaaaattttgtcttggaaatataagatgttacttttaataaagtaatgattacacaacttttt-ataaaaacttacttcttttagatgt 55446740  T
Q  727 ttaa 730  Q
    ||||    
T  55446739 ttaa 55446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 620 - 730
Target Start/End: Complemental strand, 12109763 - 12109653
Alignment:
Q  620 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 719  Q
    |||||| | |||||||||||||||| ||| |||||||||| |||| |||| ||| |  |||||||||||| ||||||||||||| |||| ||  ||||||    
T  12109763 gttaaggattctacaaatagaaattatgttttgaaaatataagatattacttttaactaagtaataattatacaactttttcataaaaaattgtttgttt 12109664  T
Q  720 tggatgattaa 730  Q
    |||||| ||||    
T  12109663 tggatgcttaa 12109653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 621 - 762
Target Start/End: Original strand, 34145906 - 34146046
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||||||| ||| |||| ||||| ||| ||| |||||| ||||||||  ||||||||||||||||||| |||| || |||| ||||| ||||| |||||    
T  34145906 ttaagaaatttactaatataaattttgtgttggaaatataagatgttatttttgatcaagtaataattatacaatttgttca-taaaatttactagtttt 34146004  T
Q  721 ggatgattaagcattgcccttgaagcactggttaaccttctc 762  Q
    ||||| |||| || ||| |||| | ||| ||||||| |||||    
T  34146005 ggatgcttaatcaatgctcttggaacaccggttaacattctc 34146046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 720
Target Start/End: Complemental strand, 8326254 - 8326151
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    ||||||||| |||||| |||||||||||| ||| || ||||||| | ||||||| |||||||||| ||| ||||||| || ||||||| |||||||| ||    
T  8326254 aatggttaataaatcttcaaatagaaattttgttttaaaaatataatatgttacttttgatcaagcaatgattacaccac-ttttcataaaaacttattt 8326156  T
Q  716 gtttt 720  Q
    |||||    
T  8326155 gtttt 8326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 615 - 689
Target Start/End: Original strand, 1711919 - 1711993
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 689  Q
    ||||||||||| |||||| || || ||||| |||||||||||||| |||||||||||||||  ||||||||||||    
T  1711919 caatggttaaggaatctaaaattataaattttgtcttgaaaatataagatgttacatttgactaagtaataatta 1711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 18391942 - 18392010
Alignment:
Q  253 atgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaact 321  Q
    |||||||||||||||||||||||||| |  | |||||||||||| ||  ||||||||||||||||||||    
T  18391942 atgtatttactacaaaactatagtaatgggttttgccatttattataggaaatggagagaatctcaact 18392010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 615 - 730
Target Start/End: Original strand, 26613060 - 26613176
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac-tttttcattaaaacttac 713  Q
    ||||||||||| |||||||||||| |  || |||||   |||||| | ||||||  ||| ||||||||||||||||| ||| ||||| || |||||||||    
T  26613060 caatggttaaggaatctacaaataaatgttttgtctcagaaatataaaatgttatttttaatcaagtaataattacataactttttttatgaaaacttac 26613159  T
Q  714 ttgttttggatgattaa 730  Q
    |||||||||||| ||||    
T  26613160 ttgttttggatgcttaa 26613176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 646 - 730
Target Start/End: Original strand, 31494031 - 31494115
Alignment:
Q  646 tgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
    ||||||| |||||| ||| ||||  ||| ||||| |||| ||||||||| |||||||| ||||||||||||||||||||| ||||    
T  31494031 tgtcttggaaatataagaagttaattttaatcaaataatgattacacaattttttcataaaaacttacttgttttggatgtttaa 31494115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 730
Target Start/End: Complemental strand, 25319562 - 25319466
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
    ||||| ||||| ||| |||||||||| | ||||||| |||||  || |||| |||||||| ||||| |||||||||||| ||||||| |||| ||||    
T  25319562 aaataaaaattttgtattgaaaatataaaatgttacttttgactaaataatgattacacaccttttacattaaaacttaattgttttagatgtttaa 25319466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 634 - 721
Target Start/End: Original strand, 2379619 - 2379705
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttg 721  Q
    ||||||||| |||||||||||||| | || |||| | ||| ||||||||| |||||||| ||||||| || ||||||||||| |||||    
T  2379619 aaatagaaactctgtcttgaaaatgtaagttgttcc-tttaatcaagtaagaattacactactttttaataaaaacttacttattttg 2379705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 621 - 700
Target Start/End: Original strand, 25958060 - 25958139
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 700  Q
    |||||||||||||| ||| ||| | |||||| ||||||| ||||||||| |||||| ||||||  ||||||||| |||||    
T  25958060 ttaagaaatctacatataaaaaatttgtcttaaaaatataagatgttacttttgataaagtaacgattacacaatttttt 25958139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 53818884 - 53818829
Alignment:
Q  675 atcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
    |||||||||| |||| |||||||||||||||||||||| || ||||||||| ||||    
T  53818884 atcaagtaatgattatacaactttttcattaaaacttatttattttggatgcttaa 53818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 54697932 - 54697995
Alignment:
Q  247 tatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggaga 310  Q
    |||||||| ||||||||||||||||||||||||| || || | |||||| ||||||||| ||||    
T  54697932 tatatcatatatttactacaaaactatagtaacggatatttcaatttatcttaaaaaatagaga 54697995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 641
Target Start/End: Complemental strand, 27144145 - 27144092
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaa 641  Q
    ||||||||||||||||||||  | ||||| ||||||||||||||| ||||||||    
T  27144145 gggtcttgttaaccggtgccctcgaggcactggttaagaaatctataaatagaa 27144092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 686
Target Start/End: Complemental strand, 3215147 - 3215088
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    |||| ||||||||||| | | |||||||||||| ||||||| | ||||||||||||||||    
T  3215147 aatccacaaatagaaactttatcttgaaaatataagatgttgcttttgatcaagtaataa 3215088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 613 - 715
Target Start/End: Original strand, 15671110 - 15671212
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| |||||| ||||| || || ||||||  |||||| |  ||| || ||| |||||||||||||||||  ||||||| || ||||||||    
T  15671110 ggcactggttaaggaatctataaataaaatttttgtcttcgaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaactta 15671209  T
Q  713 ctt 715  Q
    |||    
T  15671210 ctt 15671212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 662 - 716
Target Start/End: Original strand, 37043028 - 37043082
Alignment:
Q  662 gatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttg 716  Q
    ||||||||||||||||||||||| |||| || |||||||  | ||||||||||||    
T  37043028 gatgttacatttgatcaagtaatgattatactactttttattaaaaacttacttg 37043082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 715
Target Start/End: Original strand, 17109533 - 17109630
Alignment:
Q  619 ggttaagaaatctacaaatagaaatt-ctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    ||||||||||| || |||||||| || || ||||| |||||| |  ||| |||||| || |||||||||||||| |||||||| || |||| ||||||    
T  17109533 ggttaagaaatttataaatagaattttctatcttggaaatataaactgtaacattttattaagtaataattacataactttttaataaaaatttactt 17109630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 4e-34; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 613 - 763
Target Start/End: Original strand, 40574136 - 40574286
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||||| | |||| || ||||||  ||||||||||||||||||||||||| ||||  ||    
T  40574136 ggcactggttaaggaatctacaaatagaaattttgtcttggaaatataaaatgtaacttttgatagagtaataattacacaactttttcatgaaaatgta 40574235  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    ||||||||||||| |||| |||||||||||  |||||||||| | ||||||    
T  40574236 cttgttttggatgcttaaccattgcccttggggcactggttagcattctcc 40574286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 590 - 743
Target Start/End: Complemental strand, 13717320 - 13717168
Alignment:
Q  590 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 689  Q
    ||||||||||||||||||  ||  ||||| |||||| ||| |||||||||||||| |||||||||||||| | ||||||  ||| || ||||||||||||    
T  13717320 gtcttgttaaccggtgccctcagagcaatagttaaggaatatacaaatagaaattttgtcttgaaaatataaaatgttatttttaat-aagtaataatta 13717222  T
Q  690 cacaactttttcattaaaacttacttgttttggatgattaagcattgcccttga 743  Q
    || |||||||| || ||||||||||| |||| |||| |||| |||| |||||||    
T  13717221 cataactttttgatgaaaacttacttattttagatgcttaaccattacccttga 13717168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 724
Target Start/End: Complemental strand, 40346825 - 40346717
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||| |||||||| ||||||||| ||| |||||||||| ||||||||  ||||||||| |||| ||| |||||||||||||| |||||||||||    
T  40346825 aatggttaaggaatctacatatagaaattttgtattgaaaatataagatgttatttttgatcaaataatgattgcacaactttttcataaaaacttactt 40346726  T
Q  716 gttttggat 724  Q
     ||||||||    
T  40346725 attttggat 40346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 615 - 724
Target Start/End: Complemental strand, 23453463 - 23453353
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt-cattaaaacttac 713  Q
    |||| |||||| |||||||||||| ||||| |||||||||||||| ||||||||| ||||||||| |||  ||||||||||||||| ||| ||||||| |    
T  23453463 caatagttaaggaatctacaaataaaaattttgtcttgaaaatataagatgttacttttgatcaaataaagattacacaactttttccataaaaacttgc 23453364  T
Q  714 ttgttttggat 724  Q
    |||||||||||    
T  23453363 ttgttttggat 23453353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 618 - 730
Target Start/End: Original strand, 4978750 - 4978862
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    ||||||| |||||||  ||||||| || |||||||||||||| ||||||||| |||||||||||||| |||||||||| |||| || |||||||| || |    
T  4978750 tggttaaaaaatctattaatagaagttttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttat 4978849  T
Q  718 tttggatgattaa 730  Q
    |||||||| ||||    
T  4978850 tttggatgtttaa 4978862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 614 - 738
Target Start/End: Original strand, 6462586 - 6462709
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 713  Q
    ||||||||||| ||| ||||||||||||||||||||||  |||||| | || |||| |||||| || ||||||||| |||||||||| |||||||||||     
T  6462586 gcaatggttaaaaaa-ctacaaatagaaattctgtcttataaatataaaatattacttttgataaaataataattatacaacttttttattaaaacttat 6462684  T
Q  714 ttgttttggatgattaagcattgcc 738  Q
    |||||||| ||| |||| |||||||    
T  6462685 ttgttttgaatgcttaatcattgcc 6462709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 618 - 730
Target Start/End: Original strand, 13738393 - 13738505
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||| |||||| ||||| ||||| ||| |||||||||| ||||||||| | |||| ||||||| ||||||||| ||||| || |||||||||||||    
T  13738393 tggttaaggaatctataaataaaaattttgttttgaaaatataagatgttacttctgataaagtaatgattacacaatttttttataaaaacttacttgt 13738492  T
Q  718 tttggatgattaa 730  Q
    |||||||| ||||    
T  13738493 tttggatgcttaa 13738505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 618 - 730
Target Start/End: Complemental strand, 18717965 - 18717853
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||| ||| |||||||||||||| | | || ||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||| ||  ||||    
T  18717965 tggttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcatgaaaatttgtttgt 18717866  T
Q  718 tttggatgattaa 730  Q
    |||||||| ||||    
T  18717865 tttggatgcttaa 18717853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 615 - 763
Target Start/End: Complemental strand, 41436443 - 41436295
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||| ||||| ||| |||| ||||||||| | ||||  || ||| ||||||||  |||||| || |||| |||||||||||||||||| ||||||||||    
T  41436443 caatgattaagtaatttacatatagaaattttatcttagaagtataagatgttatttttgataaaataatgattacacaactttttcatgaaaacttact 41436344  T
Q  715 tgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    ||||||||||| |||| ||||||| |||  |||||| ||||| ||||||    
T  41436343 tgttttggatgcttaaccattgcctttggggcactgattaacattctcc 41436295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 588 - 754
Target Start/End: Complemental strand, 4557717 - 4557550
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||||||| ||| |||||||  || ||||||||||||  |||||||||||||||||| | ||||| |||||| ||| ||||  ||||||  |||||| ||    
T  4557717 gggtcttgctaagcggtgccctcagggcaatggttaaagaatctacaaatagaaattttatcttggaaatataagaagttatttttgattgagtaattat 4557618  T
Q  688 tacacaac-tttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggtta 754  Q
    ||| |||| |||||||| ||||||||||| | ||||||| |||| ||||||||||   ||||||||||    
T  4557617 tactcaacttttttcataaaaacttacttatcttggatgcttaaccattgcccttagggcactggtta 4557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 626 - 730
Target Start/End: Original strand, 4996666 - 4996770
Alignment:
Q  626 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 725  Q
    |||||||  ||||||| || |||||||||||||| ||||||||| |||||||||||||| |||||||||| |||| || |||||||| || |||||||||    
T  4996666 aaatctattaatagaagttttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatg 4996765  T
Q  726 attaa 730  Q
     ||||    
T  4996766 tttaa 4996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 616 - 738
Target Start/End: Original strand, 1004771 - 1004892
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||| |||||||||||||||||| |||||||||||||| | || |||| |||||| || | || |||||||||||||||||| |||||||  ||    
T  1004771 aatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatattacttttgat-aaattatgattacacaactttttcataaaaactttttt 1004869  T
Q  716 gttttggatgattaagcattgcc 738  Q
    ||||| |||  |||| |||||||    
T  1004870 gttttagatccttaaccattgcc 1004892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 615 - 700
Target Start/End: Complemental strand, 4186490 - 4186405
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 700  Q
    |||| ||||||||||||||||||| ||||| | | |||||||||| | ||||||||||||||| |||||||||||||||| |||||    
T  4186490 caatagttaagaaatctacaaataaaaattttattttgaaaatataaaatgttacatttgatctagtaataattacacaatttttt 4186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 629 - 730
Target Start/End: Original strand, 38024190 - 38024290
Alignment:
Q  629 tctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgatt 728  Q
    |||||||||||||||| | |||| ||||||| |||| |||| ||||||||| ||||||||||| |||||||||||||||||   ||||||||||||| ||    
T  38024190 tctacaaatagaaattttatcttaaaaatataagatattac-tttgatcaaataataattacataactttttcattaaaacgggcttgttttggatgttt 38024288  T
Q  729 aa 730  Q
    ||    
T  38024289 aa 38024290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 614 - 764
Target Start/End: Complemental strand, 8580631 - 8580481
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 713  Q
    |||||||||||  | |||| |||||||| |  ||||||| |||||| ||||||||| |||||| |||||||||||| |||  |||||||| |||||| ||    
T  8580631 gcaatggttaaagattctataaatagaattgttgtcttggaaatataagatgttacttttgattaagtaataattagacacatttttcatgaaaactaac 8580532  T
Q  714 ttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 764  Q
    ||  |||||||| |||| || |||||||   |||||||||| | |||||||    
T  8580531 ttactttggatgcttaaccaatgcccttagggcactggttagcattctcca 8580481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 588 - 720
Target Start/End: Original strand, 1870462 - 1870593
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||||||| ||||| |||||  || ||||||||||||| || ||| ||||||||| | |||||||||||||| || | | || |||||| ||||||||||    
T  1870462 gggtcttgctaaccagtgccctcagggcaatggttaaggaaactataaatagaaaatttgtcttgaaaatataagctttgacttttgattaagtaataat 1870561  T
Q  688 tacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| | ||||| || |||| |||||||||||    
T  1870562 tacac-atttttttataaaaagttacttgtttt 1870593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 754
Target Start/End: Complemental strand, 6315970 - 6315866
Alignment:
Q  650 ttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcact 749  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||| ||||| |  |||| ||| |||||||||||| |||| || ||| |||| ||||||    
T  6315970 ttgaaaatataagatgttatttttgatcaagtaatgattacacaatttttttacaaaaatttatttgttttggatgtttaaccaatgctcttggagcact 6315871  T
Q  750 ggtta 754  Q
    |||||    
T  6315870 ggtta 6315866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 586 - 768
Target Start/End: Original strand, 3689585 - 3689765
Alignment:
Q  586 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 685  Q
    |||||||||||||| | |||||  |  | ||||||||||| | |||||||||||||||| | ||||  |||||| ||||||||| |||||||  |||||     
T  3689585 aagggtcttgttaatcagtgccctcgggacaatggttaaggattctacaaatagaaattttatctttgaaatataagatgttacttttgatc--gtaatg 3689682  T
Q  686 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccataaa 768  Q
    |||||| |||||| |||| |||   | |||||||||| || |||| || ||||||||  |||||||||| | |||||| ||||    
T  3689683 attacataactttatcataaaattgtgcttgttttggctgcttaaccaatgcccttggggcactggttagcattctccttaaa 3689765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 8442695 - 8442616
Alignment:
Q  243 catttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 322  Q
    ||||||||||||||||||||||||||| |||||||| |||  ||||||||||||  || |||| |||||||||| |||||    
T  8442695 catttatatcatgtatttactacaaaattatagtaatgaaaattgccatttattcaaagaaattgagagaatctgaactc 8442616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 615 - 730
Target Start/End: Complemental strand, 18857552 - 18857437
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||| |||||||| ||| ||||| ||| | |||||| ||||||||| ||||||  |||||| ||||||||||||||| |  ||||||| |||| |||||    
T  18857552 caatgattaagaaaactataaataaaaagtttgtcttaaaaatatgatatgttatctttgataaagtaataattacacgatattttcatgaaaatttact 18857453  T
Q  715 tgttttggatgattaa 730  Q
    ||||||| ||| ||||    
T  18857452 tgttttgaatgcttaa 18857437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 619 - 735
Target Start/End: Original strand, 32909404 - 32909523
Alignment:
Q  619 ggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac---tttttcattaaaacttactt 715  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| |||| |||| |||||| ||||||| |||||| |||   ||||| || |||||||| ||    
T  32909404 ggttaagaaatatacaaatataaattttgtcttggaaatataagatattacttttgataaagtaattattacataacatttttttaataaaaacttattt 32909503  T
Q  716 gttttggatgattaagcatt 735  Q
     ||||||||| |||| ||||    
T  32909504 attttggatgcttaatcatt 32909523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 588 - 715
Target Start/End: Complemental strand, 19889891 - 19889763
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaa-attctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    |||| |||||||||| |||||||  |||| ||||||||||||||| ||||||||  || ||| ||| |||||| | |||| || ||| || |||||||||    
T  19889891 gggtattgttaaccgatgcctccggggcactggttaagaaatctataaatagaattttatgttttggaaatataatatgtcaccttttattaagtaataa 19889792  T
Q  687 ttacacaactttttcattaaaacttactt 715  Q
    |||||  ||||||| || |||||||||||    
T  19889791 ttacattactttttaatgaaaacttactt 19889763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 654 - 722
Target Start/End: Complemental strand, 27896542 - 27896474
Alignment:
Q  654 aaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 722  Q
    |||||| || |||||| ||||||  |||||||||||||||||||||| |||||||||||||| ||||||    
T  27896542 aaatataagctgttacttttgatttagtaataattacacaactttttaattaaaacttacttattttgg 27896474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 585 - 692
Target Start/End: Complemental strand, 13835984 - 13835877
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    |||| ||||||||||||   |||  ||||| ||||||||||||| ||| ||||||||| |||||||||||||||| || | | || ||| || |||||||    
T  13835984 aaagagtcttgttaacccacgccctcaaggtaatggttaagaaaactataaatagaaaatctgtcttgaaaatataagttttgactttttattaagtaat 13835885  T
Q  685 aattacac 692  Q
    ||||||||    
T  13835884 aattacac 13835877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 616 - 714
Target Start/End: Original strand, 3201134 - 3201232
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    |||||||||| ||||||||  ||||| || | |||||||||||||| || |||| |||||| || |||| ||||||||| ||||| || ||||||||||    
T  3201134 aatggttaaggaatctacatgtagaagttttatcttgaaaatatgaaatattacttttgattaactaatgattacacaattttttgataaaaacttact 3201232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 730
Target Start/End: Original strand, 28331270 - 28331364
Alignment:
Q  636 atagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
    |||||| || ||||||| |||||| | || |||  |||||||||||||| ||||||||||| |||||| ||||||||||| ||||| ||| ||||    
T  28331270 atagaagttttgtcttggaaatataaaatattatttttgatcaagtaatgattacacaactctttcataaaaacttacttattttgaatgcttaa 28331364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 686 - 743
Target Start/End: Complemental strand, 42251654 - 42251597
Alignment:
Q  686 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttga 743  Q
    ||||||||||||||||||  |||||||||||||||||||| |||| || |||||||||    
T  42251654 attacacaactttttcatgtaaacttacttgttttggatgcttaaccaatgcccttga 42251597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 613 - 720
Target Start/End: Original strand, 7932884 - 7932991
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||| ||||  |||||||||||||||||| ||| ||  |||| | |||| |||| || ||| ||||||| ||| |||||||||||| | ||||||||    
T  7932884 ggcaatgattaaagaatctacaaatagaaattttgttttagaaatgtaagattttactttggataaagtaatgattgcacaactttttcgtaaaaactta 7932983  T
Q  713 cttgtttt 720  Q
    ||| ||||    
T  7932984 cttatttt 7932991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 615 - 730
Target Start/End: Original strand, 42551958 - 42552072
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| |||||||||||| || || ||||||||| |||| | || |||  ||| ||||| |||  ||| |||| ||||||||| ||||||||||    
T  42551958 caatggttaaggaatctacaaataaaatttttgtcttgaagatat-aaatattattttttatcaaataacgattgcacatctttttcataaaaacttact 42552056  T
Q  715 tgttttggatgattaa 730  Q
    ||||||| ||| ||||    
T  42552057 tgttttgtatgtttaa 42552072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 671 - 722
Target Start/End: Original strand, 43131810 - 43131861
Alignment:
Q  671 tttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 722  Q
    |||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  43131810 tttgatcaagtaataattacactacctttttataaaaacttacttgttttgg 43131861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 3960856 - 3960934
Alignment:
Q  241 tgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaa 319  Q
    |||||||||||||||||||||| ||||||||||||||| | |  ||  |||||||  || ||||||||||| |||||||    
T  3960856 tgcatttatatcatgtatttaccacaaaactatagtaatggacattatcatttatcgtagaaaatggagaggatctcaa 3960934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 669
Target Start/End: Complemental strand, 36087488 - 36087407
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttac 669  Q
    |||||||| ||||  |||||  || ||||||||||||| |||||||||||||||||| | ||||  |||||| |||||||||    
T  36087488 gggtcttgctaactagtgccctcagggcaatggttaaggaatctacaaatagaaattttatcttagaaatataagatgttac 36087407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 610 - 730
Target Start/End: Original strand, 43080296 - 43080415
Alignment:
Q  610 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaac 709  Q
    |||| ||||||||||| | || ||||||||||| | ||||||| ||| || ||||||||| ||||| | | | || ||||||||| |||||||| ||||     
T  43080296 caagccaatggttaaggattccacaaatagaaaatgtgtcttggaaacataagatgttacttttga-ctaattatgattacacaattttttcataaaaat 43080394  T
Q  710 ttacttgttttggatgattaa 730  Q
    ||  |||||||||||| ||||    
T  43080395 ttgattgttttggatgcttaa 43080415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 616 - 730
Target Start/End: Complemental strand, 17641291 - 17641177
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||| |||||| ||||| ||| | ||| ||  |||||| | ||||||| |||||| ||| ||| ||| ||||||||||  || |||||||||||    
T  17641291 aatggttaaggaatctataaataaaaactttgtttttgaaatataaaatgttacttttgataaagaaattattgcacaacttttcaatgaaaacttactt 17641192  T
Q  716 gttttggatgattaa 730  Q
     |||| |||| ||||    
T  17641191 attttagatgcttaa 17641177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 248 - 278
Target Start/End: Original strand, 37940462 - 37940492
Alignment:
Q  248 atatcatgtatttactacaaaactatagtaa 278  Q
    |||||||||||||||||||||||||||||||    
T  37940462 atatcatgtatttactacaaaactatagtaa 37940492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 587 - 756
Target Start/End: Original strand, 46295838 - 46296007
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||| ||||| || ||| |  ||||||||||||| |||||||||||| ||||| | |||||||||||| | ||||||| |||||||||||||| |    
T  46295838 agggtcttgctaaccagtaccttcggggcaatggttaaggaatctacaaataaaaattttatcttgaaaatataaaatgttacttttgatcaagtaatca 46295937  T
Q  687 ttacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaac 756  Q
    | ||||||||||||||| |||||||| |||||||||||| ||||  | | |||||||| || ||||||||    
T  46295938 tgacacaactttttcataaaaacttatttgttttggatgcttaacaaatacccttgaaacattggttaac 46296007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 615 - 766
Target Start/End: Original strand, 13969094 - 13969245
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    |||| |||||| |||||||||||||||||| |||||||||||||| | ||||||| ||| || ||||||| ||||||||| |||||||| ||||||||||    
T  13969094 caatagttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaaacttact 13969193  T
Q  715 tgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 766  Q
    |||||||| || |||| || | | ||||  |||||||||||| |||||||||    
T  13969194 tgttttggttgcttaaccaatactcttggggcactggttaacattctccata 13969245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 613 - 740
Target Start/End: Complemental strand, 26829612 - 26829485
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||||||||||||| ||||| |||||||| ||||||| |||||| ||||||||| |||||| ||||||| |||||||||||||||||| |||| |||    
T  26829612 ggcaatggttaagaaatttacaattagaaattttgtcttggaaatataagatgttacttttgataaagtaatgattacacaactttttcatgaaaattta 26829513  T
Q  713 cttgttttggatgattaagcattgccct 740  Q
    ||| |||| |||| |||| |||||||||    
T  26829512 cttattttagatgcttaaccattgccct 26829485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 588 - 741
Target Start/End: Original strand, 8001715 - 8001868
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||| ||| ||||| |||||  || ||||||||||||| |||||| ||||||||||| | |||||||||||| ||||||||| |||||| ||||||| ||    
T  8001715 gggttttgctaaccagtgccctcagggcaatggttaaggaatctagaaatagaaattttatcttgaaaatataagatgttacttttgataaagtaatgat 8001814  T
Q  688 tacacaactttttcattaaaacttacttgttttggatgattaagcattgccctt 741  Q
    |||||||||||| ||| |||| ||||||||||| |||| |||| ||||| ||||    
T  8001815 tacacaacttttacatgaaaatttacttgttttagatgcttaaccattggcctt 8001868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 615 - 743
Target Start/End: Original strand, 33148126 - 33148254
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| ||| ||||||| |||||| |||||| ||||||| ||||| ||| |||||||||||||| ||||||||| |||||||| ||||||||||    
T  33148126 caatggttaaggaatatacaaattgaaattttgtcttaaaaatataagatgctacttttgatcaagtaatgattacacaattttttcataaaaacttact 33148225  T
Q  715 tgttttggatgattaagcattgcccttga 743  Q
    ||||||| ||| ||||  | |||||||||    
T  33148226 tgttttgaatgtttaacaaatgcccttga 33148254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 622 - 720
Target Start/End: Original strand, 10226464 - 10226562
Alignment:
Q  622 taagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||  |||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  10226464 taaggaatctacaaatagaaattttgtcttgaaaatataagatgttaattttgataaagtaatgattacacaactttttcatgaaaacttacctgtttt 10226562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 587 - 720
Target Start/End: Complemental strand, 27688625 - 27688492
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||||||||| ||| |  ||||| ||| |||||| |||||||||||  ||||| | | |||||||||| ||||||||| |||||| ||||||| |    
T  27688625 agggtcttgttaaccagtgtcatcaaggaaattgttaaggaatctacaaattaaaattttatattgaaaatataagatgttacttttgataaagtaatga 27688526  T
Q  687 ttacacaactttttcattaaaacttacttgtttt 720  Q
    |||||||| |||||||| ||||||||||||||||    
T  27688525 ttacacaagtttttcatgaaaacttacttgtttt 27688492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 616 - 743
Target Start/End: Original strand, 17169266 - 17169393
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||| ||||||||| |||||||| ||||  |||||||||||||| ||||||||  |||||| ||||||| |||| ||||||||||||| |||||||| ||    
T  17169266 aatgattaagaaatttacaaataaaaatattgtcttgaaaatataagatgttatttttgataaagtaattattatacaactttttcatgaaaacttattt 17169365  T
Q  716 gttttggatgattaagcattgcccttga 743  Q
    ||||| |||| |||| |||| |||||||    
T  17169366 gttttagatgcttaaccattacccttga 17169393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 590 - 720
Target Start/End: Complemental strand, 11449203 - 11449073
Alignment:
Q  590 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 689  Q
    |||||||||| | |||||| || || |||||||||  |||||||||||| ||| | |||||| ||||||| | ||||||  |||||||| ||||||||||    
T  11449203 gtcttgttaatcagtgccttcacggaaatggttaaagaatctacaaataaaaaatttgtcttaaaaatataatatgttaattttgatcatgtaataatta 11449104  T
Q  690 cacaactttttcattaaaacttacttgtttt 720  Q
    || ||||||||||| ||||||||||| ||||    
T  11449103 cataactttttcataaaaacttacttatttt 11449073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 585 - 700
Target Start/End: Original strand, 48282856 - 48282971
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||||||||||||||| ||  |||| |||||||| |||||| |||||||| ||||||||||||||||| |  ||| || ||| |||| |||||    
T  48282856 aaagggtcttgttaaccggtgcccccggggcactggttaaggaatctataaatagaatttctgtcttgaaaatataatctgtcactttttatcaggtaat 48282955  T
Q  685 aattacacaacttttt 700  Q
    |||||||  |||||||    
T  48282956 aattacattacttttt 48282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 621 - 763
Target Start/End: Complemental strand, 32187165 - 32187024
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| ||| || ||||||||||| |||||||||||||| ||||||||| ||||||||  |||||||| |||||| |||||| ||||| |||||||||||    
T  32187165 ttaaggaatttataaatagaaattttgtcttgaaaatataagatgttacttttgatcagataataattgcacaac-ttttcaataaaatttacttgtttt 32187067  T
Q  721 ggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    | ||  |||| || || |||||| |||| ||||| | ||||||    
T  32187066 gaattcttaaccaatgtccttgaggcaccggttatcattctcc 32187024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 756
Target Start/End: Original strand, 34347556 - 34347646
Alignment:
Q  666 ttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaac 756  Q
    |||| |||||| ||||||| |||||||||||||||||| || | |||||||||||||||| |||| |||||||||||  |||| |||||||    
T  34347556 ttacttttgataaagtaatgattacacaactttttcataaagatttacttgttttggatgcttaatcattgcccttggggcaccggttaac 34347646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 617 - 739
Target Start/End: Original strand, 30941466 - 30941588
Alignment:
Q  617 atggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttg 716  Q
    ||||||||| ||||| |||||| |  || ||||||| |||||| | ||||||  ||| |||||  ||||||||||||||||||||||  |||||||||||    
T  30941466 atggttaaggaatcttcaaatacattttttgtcttggaaatataacatgttattttttatcaaacaataattacacaactttttcatgtaaacttacttg 30941565  T
Q  717 ttttggatgattaagcattgccc 739  Q
    || |||||| |||| || |||||    
T  30941566 ttctggatgcttaaccaatgccc 30941588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 613 - 721
Target Start/End: Complemental strand, 52429748 - 52429639
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtctt-gaaaatatgagatgttacatttgatcaagtaataattacacaact-ttttcattaaaact 710  Q
    ||||||| |||| ||||||| |||| |||||| |||||| |||||| | |||||||||  |||||| |||||| ||||||||||| ||||||||||| ||    
T  52429748 ggcaatgattaaaaaatctataaattgaaattttgtcttagaaaat-taagatgttactcttgatctagtaatgattacacaacttttttcattaaagct 52429650  T
Q  711 tacttgttttg 721  Q
    |||||||||||    
T  52429649 tacttgttttg 52429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 720
Target Start/End: Complemental strand, 40699368 - 40699263
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| |||||||||||| |  || ||||||| ||| || |||| |||| ||||||| |||||||||||||||| ||||| || |||||||  |    
T  40699368 caatggttaaggaatctacaaatacattttttgtcttggaaacataagattttacttttgatcgagtaataattacacaatttttttatgaaaacttgtt 40699269  T
Q  715 tgtttt 720  Q
    ||||||    
T  40699268 tgtttt 40699263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 720
Target Start/End: Original strand, 49731157 - 49731262
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| |||| | || ||||| || ||||||||| || | ||||||||||||||| ||| ||||||||| || |||||||  | ||||||||||    
T  49731157 caatggttaaggaatccaaaagtagaagttttgtcttgaagatgtaagatgttacatttgaccaaataataattatactactttttattaaaaacttact 49731256  T
Q  715 tgtttt 720  Q
    ||||||    
T  49731257 tgtttt 49731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 653 - 724
Target Start/End: Complemental strand, 38597560 - 38597489
Alignment:
Q  653 aaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggat 724  Q
    ||||||| |||| | || |||||| ||||||| |||| |||||||||| |||||||||||||||||||||||    
T  38597560 aaaatataagatatcacttttgattaagtaatgattagacaacttttttattaaaacttacttgttttggat 38597489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 720
Target Start/End: Complemental strand, 39238951 - 39238844
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| |||| | ||||| ||||| | |||| ||||| | || ||||||||||||||||||||| ||||||| | |||||  | ||||||||    
T  39238951 ggcattggttaaggaatccataaataaaaattttctcttaaaaatgtaagttgttacatttgatcaagtaatgattacactattttttattaaaaactta 39238852  T
Q  713 cttgtttt 720  Q
    ||||||||    
T  39238851 cttgtttt 39238844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 637 - 774
Target Start/End: Complemental strand, 8279832 - 8279695
Alignment:
Q  637 tagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa-cttacttgttttggatgattaagcatt 735  Q
    ||||| || |||||||||||||| |||||||||||||||  || |||| |||| ||||| |||| ||||||| |||| ||||||| | ||||||| || |    
T  8279832 tagaagttttgtcttgaaaatataagatgttacatttgactaaataatgattatacaacgtttt-attaaaatcttaattgttttagttgattaaccaat 8279734  T
Q  736 gcccttgaagcactggttaaccttctccataaagaaatg 774  Q
    |||||||  ||||| |||| | |||||| |||| |||||    
T  8279733 gcccttggggcactagttagctttctccttaaaaaaatg 8279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 615 - 665
Target Start/End: Complemental strand, 39993496 - 39993446
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatg 665  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  39993496 caatggttaagaaatctacaaataaaaattttgtcttgaaaatataagatg 39993446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 616 - 741
Target Start/End: Original strand, 50015771 - 50015896
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||| ||||| |||||  |||||| |||| |||||| |||||||  ||| |||| |||||||||| ||  |||| ||||||||||||| |||| ||| ||    
T  50015771 aatgattaaggaatctcaaaataggaattttgtcttaaaaatatatgatattacttttgatcaagcaacgattatacaactttttcataaaaatttattt 50015870  T
Q  716 gttttggatgattaagcattgccctt 741  Q
    |||||||||  |||| || |||||||    
T  50015871 gttttggatacttaaacaatgccctt 50015896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 730
Target Start/End: Complemental strand, 30109337 - 30109229
Alignment:
Q  623 aagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca-caactttttcattaaaacttacttgttttg 721  Q
    ||||||||| |||||||||||| ||| |||||||||| | ||||||  ||| |||||  ||| ||||||  |  ||||| ||||||||||||||||||||    
T  30109337 aagaaatctccaaatagaaattttgttttgaaaatataatatgttattttttatcaaacaatgattacatgattttttttattaaaacttacttgttttg 30109238  T
Q  722 gatgattaa 730  Q
    |||| ||||    
T  30109237 gatgtttaa 30109229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 739
Target Start/End: Original strand, 17644831 - 17644872
Alignment:
Q  698 tttcattaaaacttacttgttttggatgattaagcattgccc 739  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  17644831 tttcattaaaacttacttgttttggatgcttaaccattgccc 17644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 593 - 689
Target Start/End: Original strand, 11065840 - 11065936
Alignment:
Q  593 ttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 689  Q
    |||||||||||||||  |||||||||||||||| || ||| || || ||| | | |||||||||||| || | | || |||||| ||||||||||||    
T  11065840 ttgttaaccggtgccctcaaggcaatggttaaggaaactataattataaaatttctcttgaaaatataagttttgacttttgattaagtaataatta 11065936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 715
Target Start/End: Original strand, 40391218 - 40391313
Alignment:
Q  621 ttaagaaatctacaaatagaaatt-ctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||||| |||| ||| || ||||||||||||||| |  ||| || ||| |||||||||||||||||  ||||||| || |||||| ||||    
T  40391218 ttaagaaatctataaatcgaattttctgtcttgaaaatataaactgtcactttttatcaagtaataattacattactttttgataaaaactcactt 40391313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 618 - 700
Target Start/End: Complemental strand, 48580011 - 48579929
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 700  Q
    ||||| || ||||||| |||||||||| ||||||  |||||| |||||| |  ||| ||||| |||| |||||||||||||||    
T  48580011 tggttgaggaatctactaatagaaattttgtcttagaaatataagatgtaatttttaatcaaataatgattacacaacttttt 48579929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 687
Target Start/End: Original strand, 15398275 - 15398316
Alignment:
Q  646 tgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||||||||||| | ||||||||||||||| |||||||||||    
T  15398275 tgtcttgaaaatgtaagatgttacatttgaccaagtaataat 15398316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 4e-31; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 587 - 736
Target Start/End: Complemental strand, 12095104 - 12094955
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||| ||||| |||||  |  |||||| |||||| |||||||||||||||||| ||  |||||||||| |||| |||| |||||| ||||||| |    
T  12095104 agggtcttgctaaccagtgccctcggggcaatagttaaggaatctacaaatagaaattttgcattgaaaatataagatattacttttgataaagtaatga 12095005  T
Q  687 ttacacaactttttcattaaaacttacttgttttggatgattaagcattg 736  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||    
T  12095004 ttacacaactttttcataaaaacttacttattttggatgtttaaacattg 12094955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 613 - 765
Target Start/End: Complemental strand, 27284192 - 27284040
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||||||||| |||||||| ||||||||| ||||||| |||||| ||||||||| ||||||||| |||| ||| ||||||||||| || ||||||||    
T  27284192 ggcaatggttaaggaatctacatatagaaattttgtcttggaaatataagatgttacttttgatcaaataatgattgcacaacttttttataaaaactta 27284093  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctccat 765  Q
     || ||||||||| |||| || ||||||||  | ||| |||||| ||||||||    
T  27284092 tttattttggatgtttaaccaatgcccttggggtactcgttaacattctccat 27284040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 618 - 740
Target Start/End: Original strand, 2824814 - 2824936
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||| | ||||||||||| | || |||||||  ||||| ||||||||| |||||||||||||| |||||||||| ||||||| ||||||| |||||    
T  2824814 tggttaaggattctacaaatagcacttttgtcttgggaatataagatgttacttttgatcaagtaatgattacacaacattttcataaaaacttgcttgt 2824913  T
Q  718 tttggatgattaagcattgccct 740  Q
    ||| |||| |||| || ||||||    
T  2824914 tttagatgcttaatcaatgccct 2824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 610 - 764
Target Start/End: Original strand, 31991448 - 31991602
Alignment:
Q  610 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaac 709  Q
    |||||||||||||||| |||| |||| || ||||| ||  |||||||||| ||||||||  |||||| ||||||||||||||| | |||||||| ||||     
T  31991448 caaggcaatggttaaggaatccacaattaaaaattttgctttgaaaatataagatgttatttttgataaagtaataattacacgattttttcatgaaaat 31991547  T
Q  710 ttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 764  Q
    |||||| ||||  ||| |||| ||||||| ||||| || |||||| | |||||||    
T  31991548 ttacttattttatatgtttaaccattgcctttgaaacattggttagcgttctcca 31991602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 610 - 730
Target Start/End: Original strand, 12076418 - 12076538
Alignment:
Q  610 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaac 709  Q
    ||||| |||||||||| ||||| |||||| ||||| |||||||||||||| ||||||||  |||||||||| ||| || |||||| ||||| || | |||    
T  12076418 caaggtaatggttaaggaatcttcaaataaaaattttgtcttgaaaatataagatgttaattttgatcaagcaatgatcacacaattttttgatgagaac 12076517  T
Q  710 ttacttgttttggatgattaa 730  Q
    ||||||||||| |||| ||||    
T  12076518 ttacttgttttagatgtttaa 12076538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 613 - 765
Target Start/End: Complemental strand, 48419193 - 48419041
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| |||||||||||||||||| ||| ||| |||| | | |  |||| |||||| ||||||| ||| |||||||||||||| ||||||||    
T  48419193 ggcagtggttaaggaatctacaaatagaaattttgttttggaaatgtaaaactttacttttgataaagtaatgattgcacaactttttcatgaaaactta 48419094  T
Q  713 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctccat 765  Q
    ||||||||  ||| ||||  ||||||||| | ||||| |||| | ||||||||    
T  48419093 cttgttttatatgcttaactattgcccttaaggcactagttagcattctccat 48419041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 8019961 - 8020048
Alignment:
Q  234 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaact 321  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| |||  ||||||||||||||| ||||| ||||| |||||||||    
T  8019961 aaatatgtgcatttatatcatgtatttacatcaaaactatagtaatgaacattgccatttattttagaaaattgagaggatctcaact 8020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 735
Target Start/End: Complemental strand, 13967965 - 13967842
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat-taaaactt 711  Q
    |||||| |||||| |||||||||||||||||| |||||||  ||||| ||||||||  ||| |||||||||| |||| |||||||||||||  |||| ||    
T  13967965 ggcaatagttaaggaatctacaaatagaaattttgtcttggtaatataagatgttattttttatcaagtaatgattatacaactttttcataaaaaaatt 13967866  T
Q  712 acttgttttggatgattaagcatt 735  Q
    || ||||||||||| |||| ||||    
T  13967865 acatgttttggatgtttaaccatt 13967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 634 - 741
Target Start/End: Complemental strand, 28740384 - 28740277
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 733  Q
    ||||| ||||| | |||||||||||| ||||| ||  |||||| ||||||| ||||| || |||||||||||||||||| ||||||| ||||||||| ||    
T  28740384 aaatataaattttatcttgaaaatataagatgatatttttgataaagtaatgattacgcatctttttcattaaaacttatttgttttagatgattaatca 28740285  T
Q  734 ttgccctt 741  Q
    ||||||||    
T  28740284 ttgccctt 28740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 611 - 768
Target Start/End: Complemental strand, 20775194 - 20775037
Alignment:
Q  611 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaact 710  Q
    |||| |||||||||  |||||| ||||| ||| | ||||||  |||||| |||| |||  ||||||||| |||| |||||| ||||||||||| ||||||    
T  20775194 aaggtaatggttaatgaatctataaataaaaaatttgtcttagaaatataagatattatttttgatcaaataattattacataactttttcataaaaact 20775095  T
Q  711 tacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccataaa 768  Q
    ||||||||||||||| |||| || || | ||| ||||||  ||| | |||||||||||    
T  20775094 tacttgttttggatgcttaaccaatgtctttggagcactatttagcattctccataaa 20775037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 613 - 714
Target Start/End: Original strand, 31089778 - 31089878
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    ||||||| ||||| ||||||| |||||||||| ||||| | |||||| | ||||||| |||||| ||||||| |||||||||||||||||| ||||||||    
T  31089778 ggcaatgattaaggaatctaccaatagaaattttgtctaggaaatataa-atgttacttttgataaagtaatgattacacaactttttcataaaaactta 31089876  T
Q  713 ct 714  Q
    ||    
T  31089877 ct 31089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 720
Target Start/End: Complemental strand, 19480618 - 19480550
Alignment:
Q  652 gaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  19480618 gaaaatataagatgttacttttgataaagtaatgattacacaactttttcataaaaacttacttgtttt 19480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 648 - 768
Target Start/End: Original strand, 39810731 - 39810850
Alignment:
Q  648 tcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagca 747  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||| ||||| || |||||||||||| |||| || | ||||||  |||    
T  39810731 tcttgaaaatataagatgttacttttgatcaagtaataattacacaa-tttatcatgaaaacatatttgttttggatgtttaaccaatacccttggggca 39810829  T
Q  748 ctggttaaccttctccataaa 768  Q
     | |||| | |||||||||||    
T  39810830 atagttagcattctccataaa 39810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 763
Target Start/End: Complemental strand, 28176892 - 28176746
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||||||||||||| |||||||||||||| | ||||  |||||| |||| |||  |||||| || |||| |||||||| |||||||||||||||||  ||    
T  28176892 aatggttaagaaatttacaaatagaaattttatcttagaaatataagatattat-tttgataaaataatgattacacatctttttcattaaaacttcatt 28176794  T
Q  716 gttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    ||||| |||| ||||  ||  ||||||  |||||||||||| ||||||    
T  28176793 gttttagatgcttaactatgacccttgtggcactggttaacattctcc 28176746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 631 - 719
Target Start/End: Complemental strand, 44190321 - 44190235
Alignment:
Q  631 tacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 719  Q
    |||||||| ||||| | |||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||   |||||||||||||||    
T  44190321 tacaaatataaattttatcttgaaaatataagatgttacttttgatcaagtaataattacataacttattc--gaaaacttacttgttt 44190235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 589 - 741
Target Start/End: Original strand, 52837233 - 52837388
Alignment:
Q  589 ggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttaca---tttgatcaagtaata 685  Q
    ||||||| ||| ||||| || || | ||||||||||| ||| || ||||||||||| | ||||| | |||| | |||||||    |||||||| |||||     
T  52837233 ggtcttgctaatcggtgtcttcaggacaatggttaaggaatttataaatagaaattttatcttggacatataaaatgttactacttttgatcacgtaatt 52837332  T
Q  686 attacacaactttttcattaaaacttacttgttttggatgattaagcattgccctt 741  Q
    |||||||||||||||||| |||| || ||||||||||||| |||| || |||||||    
T  52837333 attacacaactttttcataaaaattttcttgttttggatgcttaaccaatgccctt 52837388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 719
Target Start/End: Original strand, 2565418 - 2565510
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 719  Q
    |||||| ||||| ||||| | ||||||||| || | ||||||| |||||||||||||| ||||||||||||||  || |||||||||||||||    
T  2565418 aatctataaatataaattttatcttgaaaacataaaatgttacttttgatcaagtaatgattacacaacttttctataaaaacttacttgttt 2565510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 721
Target Start/End: Complemental strand, 22019718 - 22019615
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||| |||||| ||||  ||||| |||||| ||||||| ||||||||  ||  || ||||||| |||||||||||||||| | |||||||||||||    
T  22019718 tggttaaggaatctataaatgaaaattttgtctttaaaatataagatgttattttctattaagtaatgattacacaactttttcttgaaaacttacttgt 22019619  T
Q  718 tttg 721  Q
    ||||    
T  22019618 tttg 22019615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 720
Target Start/End: Original strand, 22611875 - 22611998
Alignment:
Q  598 aaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaa-ct 696  Q
    ||||||||||| || |  |||| |||||||||||||||||| ||||| |||||| ||||||| ||||||||| || ||| ||||||| ||||| |||  |    
T  22611875 aaccggtgccttcaggataatgattaagaaatctacaaatataaattttgtcttaaaaatataagatgttactttcgataaagtaatgattactcaattt 22611974  T
Q  697 ttttcattaaaacttacttgtttt 720  Q
    |||| ||| |||||||||| ||||    
T  22611975 tttttatttaaacttacttatttt 22611998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 597 - 711
Target Start/End: Original strand, 7437806 - 7437920
Alignment:
Q  597 taaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaact 696  Q
    |||| ||||||  |||||||||||||||  | || ||||||| ||| | ||||||| |||||| ||||||||| ||||| ||||| || |||||||||||    
T  7437806 taactggtgccctcaaggcaatggttaacgattccacaaataaaaaatgtgtcttggaaatataagatgttacttttgaacaagtcatgattacacaact 7437905  T
Q  697 ttttcattaaaactt 711  Q
    ||||| | |||||||    
T  7437906 ttttcgtaaaaactt 7437920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 585 - 730
Target Start/End: Complemental strand, 27133697 - 27133552
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||| ||||| || ||  || | ||||||||||| ||||  |||||||||| | ||||||  |||||| |||| |||  |||| |||||||||    
T  27133697 aaagggtcttgctaaccagtaccctcaggacaatggttaaggaatcaccaaatagaaagtttgtctttgaaatataagatattatttttgttcaagtaat 27133598  T
Q  685 aattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
     |||| ||||||||||||| ||||||||| | |||| |||| ||||    
T  27133597 gattatacaactttttcataaaaacttacctattttagatgcttaa 27133552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 618 - 722
Target Start/End: Original strand, 19147146 - 19147250
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    ||||||||||||||| || ||||| ||||||||||||||||| |  ||| || ||| ||||| |||||||||||  |||| || || ||||||||||| |    
T  19147146 tggttaagaaatctataagtagaatttctgtcttgaaaatataaactgtcactttttatcaaataataattacattacttattaataaaaacttacttct 19147245  T
Q  718 tttgg 722  Q
    |||||    
T  19147246 tttgg 19147250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 610 - 721
Target Start/End: Original strand, 51100016 - 51100128
Alignment:
Q  610 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat-taaaa 708  Q
    |||||||||||||||| |||||| ||||||||| | | | |||||||||| || | | || |||||| ||||||||||||||| ||||||| ||  ||||    
T  51100016 caaggcaatggttaaggaatctataaatagaaaatttattttgaaaatataagttttaacttttgattaagtaataattacactactttttaataaaaaa 51100115  T
Q  709 cttacttgttttg 721  Q
     ||||||||||||    
T  51100116 gttacttgttttg 51100128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 615 - 730
Target Start/End: Original strand, 16341097 - 16341212
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| ||| |||||||| || || ||||||  |||||| | ||||||| |||||| ||||||| |||||| || |||||||| |||| ||| |    
T  16341097 caatggttaaggaatttacaaataaaatttttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatt 16341196  T
Q  715 tgttttggatgattaa 730  Q
    | ||||||||| ||||    
T  16341197 tattttggatgtttaa 16341212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 739
Target Start/End: Original strand, 41142262 - 41142413
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||||||||||||| ||||| ||  |||| |||||||| |||  |  |||| ||||| ||||||||||| || || | |||| |||||| || |||||||    
T  41142262 gggtcttgttaaccagtgcccccggggcattggttaaggaattcatgaataaaaattttgtcttgaaaaaataaggtcttacttttgattaaataataat 41142361  T
Q  688 tacacaactttttcattaaaacttacttgttttggatgattaagcattgccc 739  Q
    ||||  |||||||  | |||| |||||||||||| ||| |||| ||||||||    
T  41142362 tacattacttttttgtgaaaatttacttgttttgaatgcttaaccattgccc 41142413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 45921335 - 45921418
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 699  Q
    |||||||||| |||||| ||||||||| | |||||||||||||| || | | ||  ||||| ||||||||||||||||||||||    
T  45921335 aatggttaaggaatctataaatagaaaatttgtcttgaaaatataagttttgactattgattaagtaataattacacaactttt 45921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 697 - 766
Target Start/End: Original strand, 36506747 - 36506816
Alignment:
Q  697 ttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 766  Q
    ||||||| |||| |||||||||||||||| ||||||| |||||||| |||| |||||| | |||||||||    
T  36506747 ttttcatgaaaatttacttgttttggatgcttaagcaatgcccttggagcattggttagcattctccata 36506816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 722
Target Start/End: Complemental strand, 30694382 - 30694297
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 722  Q
    ||||||||||| |||||||||||||| || ||||   ||||||||||||||||||| ||  || |||  | ||||||||||||||||||    
T  30694382 aaatagaaattttgtcttgaaaatataagttgtt---tttgatcaagtaataattatacctctgttttgtgaaaacttacttgttttgg 30694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 703
Target Start/End: Original strand, 31861429 - 31861511
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat 703  Q
    ||||| ||| |||| ||| ||||| | | ||| |||||| ||||||||| |||||||||||||| ||||||||| ||||||||    
T  31861429 ttaaggaatttacatataaaaattttattttggaaatataagatgttacttttgatcaagtaatgattacacaaatttttcat 31861511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 714
Target Start/End: Complemental strand, 44639951 - 44639887
Alignment:
Q  650 ttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    |||| ||||| ||||||||| |||||| ||||||| ||||||||||||||| || ||||| ||||    
T  44639951 ttgagaatataagatgttacttttgattaagtaatgattacacaactttttgatgaaaacatact 44639887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 714
Target Start/End: Original strand, 37431793 - 37431876
Alignment:
Q  631 tacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    |||||||| ||||| | |||| ||| ||| ||||||||| ||| || ||||||||||| ||||||||||  || ||||||||||    
T  37431793 tacaaataaaaattttatcttaaaattataagatgttacttttaattaagtaataattgcacaacttttcaataaaaacttact 37431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 720
Target Start/End: Complemental strand, 55090900 - 55090794
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| || ||| ||||  ||| | |||||||||||||| || | | || |||||| |||| |||||||||||||||||| || |||| |||    
T  55090900 ggcattggttaaggaaactataaatgaaaaatttgtcttgaaaatataagttttgacttttgattaagttataattacacaacttttt-ataaaaagtta 55090802  T
Q  713 cttgtttt 720  Q
    ||||||||    
T  55090801 cttgtttt 55090794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 737
Target Start/End: Original strand, 55126785 - 55126896
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacattt-gatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 725  Q
    |||||||||||| |  || ||| |||||||||| | ||||||| ||| ||| || |||| |||||||||||||||||| |||||||| || |||| |||     
T  55126785 aatctacaaataaattttttgttttgaaaatataaaatgttactttttgataaaataatgattacacaactttttcataaaaacttatttattttagata 55126884  T
Q  726 attaagcattgc 737  Q
     |||| ||||||    
T  55126885 cttaaccattgc 55126896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 7593144 - 7593181
Alignment:
Q  241 tgcatttatatcatgtatttactacaaaactatagtaa 278  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  7593144 tgcatttatatcatatatttacttcaaaactatagtaa 7593181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 8019528 - 8019585
Alignment:
Q  242 gcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttatttta 299  Q
    ||||||| |||||||||||||  |||||||||||||| |||  |||||||||| ||||    
T  8019528 gcatttacatcatgtatttacatcaaaactatagtaatgaacattgccatttaattta 8019585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 585 - 763
Target Start/End: Complemental strand, 22294131 - 22293954
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||| ||| | |||||||  || ||||||||||| |||||||||||||||||| ||||||| |||||| |||| ||   ||||||||| ||||    
T  22294131 aaagggtcttgctaaacagtgcctcagag-caatggttaaggaatctacaaatagaaattttgtcttggaaatataagatattggttttgatcaaataat 22294033  T
Q  685 aattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
     ||| |||||||||||||| ||||||||||||||||| ||| |||| || | ||||||  |||||||||| | ||||||    
T  22294032 tattgcacaactttttcataaaaacttacttgttttgaatgtttaaccaatacccttgtggcactggttagcattctcc 22293954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 615 - 741
Target Start/End: Complemental strand, 11816029 - 11815903
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||  |||||| ||||||||||| |||||||||||||| ||||||||| |||||| ||||||| ||||||||  |||||||| ||||||||||    
T  11816029 caatggttaatgaatctaaaaatagaaattttgtcttgaaaatataagatgttacttttgataaagtaatgattacacatatttttcataaaaacttact 11815930  T
Q  715 tgttttggatgattaagcattgccctt 741  Q
    ||||||  ||  |||| ||||||||||    
T  11815929 tgttttaaatatttaatcattgccctt 11815903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 613 - 743
Target Start/End: Complemental strand, 27544709 - 27544579
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||||||  |||| |||||||||||||||||| | |||||||||||| ||||||||  ||| |||| ||||| |||||||||||||||||| |||| |||    
T  27544709 ggcaatgactaaggaatctacaaatagaaattttatcttgaaaatataagatgttattttttatcatgtaatgattacacaactttttcatgaaaattta 27544610  T
Q  713 cttgttttggatgattaagcattgcccttga 743  Q
    ||||||||||||| ||||  | |||||||||    
T  27544609 cttgttttggatgtttaactaatgcccttga 27544579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 618 - 730
Target Start/End: Original strand, 30840596 - 30840707
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||| ||||||| || ||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||  | |||||||||||||    
T  30840596 tggttaaggaatctactaacagaaaatttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacttttt-ttgaaaacttacttgt 30840694  T
Q  718 tttggatgattaa 730  Q
    |||||||| ||||    
T  30840695 tttggatgcttaa 30840707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 618 - 740
Target Start/End: Original strand, 30293821 - 30293943
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||  |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||| |||||| || |||||||| |||||||  ||||    
T  30293821 tggttaaagaatctacaaatagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacataattttttcatgaaaacttgtttgt 30293920  T
Q  718 tttggatgattaagcattgccct 740  Q
    |||| ||| |||| || ||||||    
T  30293921 tttgaatggttaaccagtgccct 30293943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 616 - 712
Target Start/End: Complemental strand, 36482168 - 36482072
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||||||||  |||||||||||||||||| ||| |||||||||| ||||||||| ||||||||| ||||  |||||||||||||| || ||||||||    
T  36482168 aatggttaatgaatctacaaatagaaattttgttttgaaaatataagatgttacttttgatcaaataatgtttacacaacttttttatgaaaactta 36482072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 586 - 722
Target Start/End: Complemental strand, 14863483 - 14863347
Alignment:
Q  586 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 685  Q
    |||||||||||||||| |||||| |  | || |||||||  |||||| ||||| || || |||||||||||||| |  ||| || ||| |||||||||||    
T  14863483 aagggtcttgttaaccagtgccttcgggacactggttaaagaatctataaatataatttatgtcttgaaaatataaactgtcactttttatcaagtaata 14863384  T
Q  686 attacacaactttttcattaaaacttacttgttttgg 722  Q
    ||||||  | ||||| || ||||||||||| ||||||    
T  14863383 attacattaatttttaataaaaacttactttttttgg 14863347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 615 - 712
Target Start/End: Original strand, 14044677 - 14044772
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||| |||||||||||| || || | |||||||| ||| |||| |||| |||||||||||||| ||||||||||||||| || ||||||||    
T  14044677 caattgttaaggaatctacaaata-aatttttttcttgaaa-tataagatattacttttgatcaagtaattattacacaacttttttataaaaactta 14044772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 620 - 693
Target Start/End: Complemental strand, 18242552 - 18242479
Alignment:
Q  620 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacaca 693  Q
    |||||| ||||||||| |||||||| |||||||||||||| |||||  || ||||||| |||||| ||||||||    
T  18242552 gttaaggaatctacaagtagaaattttgtcttgaaaatataagatgcgacttttgatctagtaatgattacaca 18242479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 762
Target Start/End: Original strand, 8151765 - 8151940
Alignment:
Q  590 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaag--taataat 687  Q
    |||||||||||| ||||   || ||| ||||||||| ||| || || |||||||| ||| |||||||||| ||||||||| ||| ||||||  |||||||    
T  8151765 gtcttgttaaccagtgctctcagggccatggttaaggaatttataagtagaaattttgttttgaaaatataagatgttacttttaatcaagtataataat 8151864  T
Q  688 tacacaactttttcat-taaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctc 762  Q
    || | |||||||| ||  |||| |||||| ||||| ||  |||| || | ||||| | |||||||||||| |||||    
T  8151865 tatataacttttttatgaaaaatttacttattttgtatatttaatcaatacccttaaggcactggttaacattctc 8151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 733
Target Start/End: Complemental strand, 41645147 - 41645034
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    |||||||  |||||| ||||| ||||| ||||| |||||||| |||| |||  ||| |||||||||| ||||||||||  |||||| |||| |||||| |    
T  41645147 tggttaaagaatctataaataaaaattttgtctagaaaatataagatattattttttatcaagtaatgattacacaac--tttcatgaaaatttacttat 41645050  T
Q  718 tttggatgattaagca 733  Q
    ||| |||| |||||||    
T  41645049 tttagatgcttaagca 41645034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 614 - 720
Target Start/End: Original strand, 1447548 - 1447654
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcatt-aaaactta 712  Q
    |||||| |||||||||| | || |||||||| | | ||| |||||| || ||||||| |||| |||||||||||||||| || |||||||| ||||||||    
T  1447548 gcaatgattaagaaatccataagtagaaattttattttggaaatataagctgttacagttgaccaagtaataattacactac-ttttcattaaaaactta 1447646  T
Q  713 cttgtttt 720  Q
    ||| ||||    
T  1447647 cttatttt 1447654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 613 - 715
Target Start/End: Original strand, 2611141 - 2611244
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattc-tgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactt 711  Q
    |||| |||||||| |||||| |||||||||||  ||||||| |||||| || ||| || ||| || ||||||||||||||  ||||||| || |||||||    
T  2611141 ggcactggttaaggaatctataaatagaaatttatgtcttggaaatataagctgtcactttttattaagtaataattacattactttttaataaaaactt 2611240  T
Q  712 actt 715  Q
    ||||    
T  2611241 actt 2611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 613 - 691
Target Start/End: Complemental strand, 6102948 - 6102870
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca 691  Q
    ||||||||||||| |||||| ||||||||| | |||||| ||||||| || | | || |||||| ||||||||||||||    
T  6102948 ggcaatggttaaggaatctataaatagaaaatttgtcttcaaaatataagttttgacttttgattaagtaataattaca 6102870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 735
Target Start/End: Complemental strand, 6646367 - 6646286
Alignment:
Q  654 aaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcatt 735  Q
    |||||| | ||||||| |||||| | ||||| ||||||||| ||||||||||| | ||||||||||| |||| |||| ||||    
T  6646367 aaatataatatgttacttttgataatgtaatgattacacaattttttcattaatatttacttgttttagatgtttaaacatt 6646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 763
Target Start/End: Original strand, 7609595 - 7609682
Alignment:
Q  675 atcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    |||||||||||||||||  ||||||| || ||||||||||| |||||| || |||| || |||||  | ||||||||||||| ||||||    
T  7609595 atcaagtaataattacattactttttaataaaaacttacttcttttgg-tgcttaaccaatgccccgggagcactggttaacattctcc 7609682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 763
Target Start/End: Complemental strand, 8435210 - 8435027
Alignment:
Q  580 taaagaaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaa 679  Q
    |||| ||||||||||||||||| ||||| ||   ||| || |||||||||||| || | ||||   ||||||| |||||| |  ||| || ||||| |||    
T  8435210 taaacaaagggtcttgttaacccgtgcccccggtgcactgattaagaaatctaaaagtggaaaaattgtcttggaaatataaagtgtaacttttgaccaa 8435111  T
Q  680 gtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
     ||||||||| || | ||||| || ||| ||||||| ||||||||| |||| || ||||   |  |||||||||||| ||||||    
T  8435110 ctaataattataccattttttaataaaatcttacttattttggatgcttaaccaatgcctcaggggcactggttaacattctcc 8435027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 654 - 724
Target Start/End: Complemental strand, 1056888 - 1056818
Alignment:
Q  654 aaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggat 724  Q
    |||||| | ||||||| ||| ||||| |||| |||||| || |||||||| |||||||| |||||||||||    
T  1056888 aaatataatatgttacttttaatcaaataatgattacataattttttcataaaaacttatttgttttggat 1056818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 585 - 691
Target Start/End: Original strand, 12036273 - 12036379
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||| ||||| || ||  || || ||| |||||| || ||| ||||||||| | |||||||||||||| || | | || |||||| |||||||    
T  12036273 aaagggtcttgctaaccagtaccctcagggaaatagttaaggaacctataaatagaaaatttgtcttgaaaatataagttttgacttttgattaagtaat 12036372  T
Q  685 aattaca 691  Q
    |||||||    
T  12036373 aattaca 12036379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 614 - 664
Target Start/End: Complemental strand, 34347001 - 34346951
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagat 664  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||| ||||    
T  34347001 gcaatggttaaggaatctacaaataaaaaatttgtcttgaaaatataagat 34346951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 614 - 756
Target Start/End: Complemental strand, 120788 - 120646
Alignment:
Q  614 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 713  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| |||||| || |||| | ||||||  ||| |||||||||| ||  |||||||||    
T  120788 gcaatggttaaggaatctacaaatagaaattttgtcttgaaaatataagatgtcacttttggtaaagtaacgattgcacaacttttccacaaaaacttac 120689  T
Q  714 ttgttttggatgattaagcattgcccttgaagcactggttaac 756  Q
    || ||||||||| |||| ||||  ||||  | |||||||||||    
T  120688 ttattttggatgtttaaccattatccttagaacactggttaac 120646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 620 - 730
Target Start/End: Original strand, 5611129 - 5611239
Alignment:
Q  620 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 719  Q
    |||||| |||||| ||||||||||| ||||||  |||||| ||||||||| ||| ||||| ||||||||| ||||||| ||||| |||||||||||||||    
T  5611129 gttaaggaatctataaatagaaattttgtcttagaaatataagatgttacttttaatcaaataataattatacaacttattcataaaaacttacttgttt 5611228  T
Q  720 tggatgattaa 730  Q
    |||||| ||||    
T  5611229 tggatgtttaa 5611239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 615 - 741
Target Start/End: Complemental strand, 32134164 - 32134038
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    |||| |||||| |||||||||||||||||| ||| |||| ||||| ||||||||  ||| |||||||||| |||||||||||||||||  ||||||||||    
T  32134164 caatagttaaggaatctacaaatagaaattttgttttgagaatataagatgttattttttatcaagtaatgattacacaactttttcaagaaaacttact 32134065  T
Q  715 tgttttggatgattaagcattgccctt 741  Q
    | |||| |||| |||| || |||||||    
T  32134064 tattttagatgcttaaccaatgccctt 32134038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 613 - 763
Target Start/End: Complemental strand, 227455 - 227303
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgat-caagtaataattacacaa-ctttttcattaaaact 710  Q
    ||||||||||||| |||||| ||||||||||| | | |||||||||| ||||||||| ||||||  ||  ||| |||||||||  |||||||| ||| ||    
T  227455 ggcaatggttaaggaatctataaatagaaatttttttttgaaaatataagatgttacttttgataaaaacaatgattacacaatttttttcataaaatct 227356  T
Q  711 tacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    ||||| ||||||||| |||| |||| ||||||| |||||| ||||| ||||||    
T  227355 tacttcttttggatgcttaaccatttcccttgaggcactgattaacattctcc 227303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 615 - 730
Target Start/End: Original strand, 19659610 - 19659724
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||| ||| |||||||||| | ||||| ||| ||||||||||||||| ||| |||||||||| |||| ||||||||||||||| || ||||||||||    
T  19659610 caatggtcaaggaatctacaaaaataaattttgt-ttgaaaatatgagatattatatttgatcaactaatgattacacaacttttttataaaaacttact 19659708  T
Q  715 tgttttggatgattaa 730  Q
    | |||| |||| ||||    
T  19659709 tattttagatgtttaa 19659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 587 - 763
Target Start/End: Complemental strand, 31223330 - 31223165
Alignment:
Q  587 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 686  Q
    ||||||||| ||| ||||||| |||||||| |||||||  |||||||||||| ||||| ||||||| |||||| ||||             ||||||| |    
T  31223330 agggtcttgctaatcggtgccaccaaggcattggttaatgaatctacaaataaaaattttgtcttggaaatataagatt------------aagtaatga 31223243  T
Q  687 ttacacaacttttt-cattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||| || |||||||| ||||| ||||| | ||||||    
T  31223242 ttacacaacttttttcatgaaaacttacttgttttggatgtttaaccaatgcccttggagcaccggttagcattctcc 31223165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 720
Target Start/End: Original strand, 33121279 - 33121411
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||| ||||||||| ||||||  || | |||||||||||||| | |||||| || || |||||||||||||| ||||||||  ||| |||||  ||| ||    
T  33121279 gggttttgttaaccagtgcctttaaagtaatggttaagaaattttcaaataaaatttttgtcttgaaaatataagatgttattttttatcaaacaatgat 33121378  T
Q  688 tacacaactttttcattaaaacttacttgtttt 720  Q
    |||||||||||||||| |||| |||||| ||||    
T  33121379 tacacaactttttcatgaaaatttacttatttt 33121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 611 - 720
Target Start/End: Original strand, 2911458 - 2911567
Alignment:
Q  611 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaact 710  Q
    ||||||||||||||  ||| || || ||||| || |||||||||||| | |||||||||||||||||||||||| |||| || |||||||  | ||||||    
T  2911458 aaggcaatggttaaagaatttaaaagtagaagttttgtcttgaaaatgtaagatgttacatttgatcaagtaatgattatactacttttttttaaaaact 2911557  T
Q  711 tacttgtttt 720  Q
    || |||||||    
T  2911558 tatttgtttt 2911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 21917434 - 21917346
Alignment:
Q  234 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 322  Q
    |||||| || ||||||||||||||||||||||||||||||||||| | |   ||| ||||||||||| |||||||||  ||||||||||    
T  21917434 aaatatgtgtatttatatcatgtatttactacaaaactatagtaatggaaactgcaatttattttaagaaatggagaatatctcaactc 21917346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 585 - 730
Target Start/End: Complemental strand, 2470499 - 2470354
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 684  Q
    ||||||||||| ||||| || ||  || | ||||||||||| ||||  |||||||||| | ||||||  |||||| |||| |||  |||| |||||||||    
T  2470499 aaagggtcttgctaaccagtaccctcaggacaatggttaaggaatcaccaaatagaaagtttgtctttgaaatataagatattatttttgttcaagtaat 2470400  T
Q  685 aattacacaactttttcattaaaacttacttgttttggatgattaa 730  Q
     |||| ||||||||||||| ||||||||| | |||| |||| ||||    
T  2470399 gattatacaactttttcataaaaacttacctattttagatgcttaa 2470354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 10008304 - 10008204
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| |||||| ||| ||||||| |||||| ||||||| |   ||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  10008304 ttaaggaatctaaaaa-agaaattttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 10008206  T
Q  721 gg 722  Q
    ||    
T  10008205 gg 10008204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 730
Target Start/End: Original strand, 17834969 - 17835086
Alignment:
Q  613 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 712  Q
    |||| |||||||| | ||||||||||| |||  ||||||  |||||| |||| |||| |||||| |||||||||||| || | |||||||| |||||||     
T  17834969 ggcattggttaaggattctacaaatagcaatattgtctttgaaatataagatattacttttgattaagtaataattatacgattttttcatgaaaacttg 17835068  T
Q  713 cttgttttggatgattaa 730  Q
    ||||||||| ||| ||||    
T  17835069 cttgttttgaatgtttaa 17835086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 648 - 721
Target Start/End: Complemental strand, 18493328 - 18493255
Alignment:
Q  648 tcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttg 721  Q
    |||||||||||| | ||||||| |||||||||||||| |||||| |||||||| || |||||||||||| ||||    
T  18493328 tcttgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaaacttacttgatttg 18493255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 588 - 720
Target Start/End: Original strand, 19320239 - 19320372
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    |||||||| ||||  |||||  ||||| |||| ||||| |||||||||||| |  || ||||||| |||||| | ||||||| |||||| ||||||  ||    
T  19320239 gggtcttgctaactagtgccctcaaggtaatgattaaggaatctacaaataaattttttgtcttgcaaatataaaatgttacttttgataaagtaacgat 19320338  T
Q  688 tacacaact-ttttcattaaaacttacttgtttt 720  Q
    ||||||||| |||| || ||||||||||||||||    
T  19320339 tacacaactctttttatgaaaacttacttgtttt 19320372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 735
Target Start/End: Original strand, 8636785 - 8636859
Alignment:
Q  661 agatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcatt 735  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||| ||||||||||| ||||| ||| |||| ||||    
T  8636785 agatgttacttttgataaagtaatgattacataactttttcatgaaaacttacttattttgtatgcttaatcatt 8636859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 621 - 730
Target Start/End: Original strand, 17345843 - 17345952
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| |||| ||||||| ||||| ||| || ||||||| | ||||||| ||||||||||||   |||||| |||||||||| ||||| ||| |||||||    
T  17345843 ttaaggaatcaacaaataaaaattttgttttaaaaatataaaatgttacttttgatcaagtagcgattacataactttttcactaaaatttatttgtttt 17345942  T
Q  721 ggatgattaa 730  Q
    | ||| ||||    
T  17345943 gaatgcttaa 17345952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 763
Target Start/End: Complemental strand, 30929615 - 30929465
Alignment:
Q  615 caatggttaagaaatctacaaatagaaa-ttctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcatt--aaaactt 711  Q
    ||||||||||  |||||| || |||||| || || ||||||||| | ||||||||||||||||||| ||||||||| || ||||||| |||  |||| ||    
T  30929615 caatggttaaagaatctaaaagtagaaagttttgccttgaaaatttaagatgttacatttgatcaaataataattatactacttttt-attaaaaaattt 30929517  T
Q  712 acttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 763  Q
    ||||||||| |  | |||| || |||||||| |||||| |||| | ||||||    
T  30929516 acttgttttagtcgcttaaccaatgcccttggagcactagttagcattctcc 30929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 671 - 722
Target Start/End: Complemental strand, 27082373 - 27082322
Alignment:
Q  671 tttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 722  Q
    ||||||||| |||| |||||||||||||||||| |||| |||||||||||||    
T  27082373 tttgatcaaataatcattacacaactttttcatgaaaatttacttgttttgg 27082322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 618 - 720
Target Start/End: Complemental strand, 12677935 - 12677833
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 717  Q
    ||||||||||||| | || |||||||| | ||||  |||| ||||   |||||||||| |||||||| ||||||| |||||||  | |||||||||||||    
T  12677935 tggttaagaaatccataagtagaaattttctcttagaaatgtgagcgattacatttgaccaagtaatgattacactactttttattaaaaacttacttgt 12677836  T
Q  718 ttt 720  Q
    |||    
T  12677835 ttt 12677833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 589 - 693
Target Start/End: Original strand, 17453942 - 17454046
Alignment:
Q  589 ggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatt 688  Q
    ||||||| ||||| |||||| || |||| |||||||  | | || ||||  ||||| | | |||||||||| ||||||||| |||||||| |||||||||    
T  17453942 ggtcttgctaaccagtgccttcagggcattggttaacgattttataaatgaaaattttattttgaaaatataagatgttacttttgatcacgtaataatt 17454041  T
Q  689 acaca 693  Q
    |||||    
T  17454042 acaca 17454046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 634 - 688
Target Start/End: Original strand, 2613366 - 2613420
Alignment:
Q  634 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatt 688  Q
    ||||||||||| |||||| ||||||| || || ||| ||||||||||||||||||    
T  2613366 aaatagaaattttgtcttaaaaatataagttgctacttttgatcaagtaataatt 2613420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 18239246 - 18239315
Alignment:
Q  241 tgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagag 311  Q
    ||||||||||| |||||||||| |||||| |||||||| | || ||| |||||||| || |||||||||||    
T  18239246 tgcatttatataatgtatttac-acaaaaatatagtaatggatattgtcatttattgtagaaaatggagag 18239315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 701
Target Start/End: Complemental strand, 2398125 - 2398040
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttc 701  Q
    |||| ||||| |||||| ||||||||| | | |||||||||||| || | | || |||||| ||||||||||||||  ||||||||    
T  2398125 aatgattaaggaatctataaatagaaaatttatcttgaaaatataagttttgacttttgattaagtaataattacatcactttttc 2398040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 616 - 768
Target Start/End: Original strand, 15362 - 15514
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 715  Q
    |||| ||||| ||| || |||||||| || |||||||||||||| ||||||||| ||||| |||||||  |||| |||  |||||||| |||||||||||    
T  15362 aatgattaaggaatttataaatagaatttttgtcttgaaaatataagatgttacttttgaccaagtaacgattatacacatttttcataaaaacttactt 15461  T
Q  716 gttttggatgattaagcattgcccttgaagcactggttaaccttctccataaa 768  Q
     ||||| ||| |||| || | ||| |||  ||||| ||||| |||||||||||    
T  15462 attttgaatgtttaaccaatacccctgagacactgattaacattctccataaa 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 621 - 721
Target Start/End: Original strand, 29988 - 30088
Alignment:
Q  621 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 720  Q
    ||||| |||||||||||||||| | | | |||||||||| ||||||||| ||| || || ||||||||||||||  ||||||| ||||||||||||||||    
T  29988 ttaaggaatctacaaatagaaactttattttgaaaatataagatgttacttttaattaaataataattacacaaacttttcataaaaacttacttgtttt 30087  T
Q  721 g 721  Q
    |    
T  30088 g 30088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 616 - 694
Target Start/End: Complemental strand, 7475 - 7398
Alignment:
Q  616 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaa 694  Q
    |||||||||||||| ||| |||||||||| |||||||||||||| |||| |||| ||||||||| |||| |||||||||    
T  7475 aatggttaagaaatttacgaatagaaatt-tgtcttgaaaatataagatattacttttgatcaaataatgattacacaa 7398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 615 - 730
Target Start/End: Complemental strand, 51764 - 51649
Alignment:
Q  615 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 714  Q
    ||||||||||| ||| |||||||| || || ||||||  |||||| | ||||||| |||||| ||||||| |||||| || |||||||| |||| ||| |    
T  51764 caatggttaaggaatttacaaataaaatttttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatt 51665  T
Q  715 tgttttggatgattaa 730  Q
    | ||||||||| ||||    
T  51664 tattttggatgtttaa 51649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 700
Target Start/End: Complemental strand, 36668 - 36565
Alignment:
Q  597 taaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaact 696  Q
    ||||||||||||  |||| |||| ||||  ||||| |||||| ||||| ||| |||||||||| ||||||||| |||||| || |||| |||| ||||||    
T  36668 taaccggtgcctttaaggtaatgattaaagaatcttcaaataaaaattttgttttgaaaatataagatgttacttttgattaaataatgattatacaact 36569  T
Q  697 tttt 700  Q
    ||||    
T  36568 tttt 36565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 708
Target Start/End: Complemental strand, 3432 - 3350
Alignment:
Q  626 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 708  Q
    ||||||| ||||| ||||| |||||||||||||| | ||||||| |||||| ||||| | |||| ||||||||||||| ||||    
T  3432 aaatctataaataaaaattttgtcttgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 3350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 712
Target Start/End: Complemental strand, 38946 - 38822
Alignment:
Q  588 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 687  Q
    ||||||||||||||||||||| |  || | ||||||| ||||||| |||||||| || | ||||| |||||| |  ||| |  ||| |||||||||||||    
T  38946 gggtcttgttaaccggtgccttcggggtactggttaaaaaatctataaatagaatttatatcttggaaatataaactgtcattttttatcaagtaataat 38847  T
Q  688 tacacaactttttcattaaaactta 712  Q
    ||||  ||||||| || ||||||||    
T  38846 tacattactttttaataaaaactta 38822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 618 - 740
Target Start/End: Original strand, 18014 - 18137
Alignment:
Q  618 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac-tttttcattaaaacttacttg 716  Q
    |||||||| || ||| ||||||||| | | |||| ||||||| || | | || |||||| |||||||||||||||||| ||||| || |||| |||||||    
T  18014 tggttaaggaaactataaatagaaaatttatcttaaaaatataagttttgacttttgattaagtaataattacacaactttttttataaaaagttacttg 18113  T
Q  717 ttttggatgattaagcattgccct 740  Q
    |||||| || |||| || ||||||    
T  18114 ttttggttgcttaaccaatgccct 18137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1372 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 585 - 659
Target Start/End: Original strand, 1237 - 1310
Alignment:
Q  585 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatat 659  Q
    ||||||||||||||||||||||| ||  ||||  ||||||| |||||| |||||||| |||||||||| ||||||    
T  1237 aaagggtcttgttaaccggtgcc-ccggggcacgggttaaggaatctataaatagaatttctgtcttggaaatat 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 725
Target Start/End: Original strand, 1921 - 2018
Alignment:
Q  627 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 725  Q
    |||||||||||||||||| ||||||| |||| | ||||||||| | | |  ||||||| ||||  ||| |||||||| |||||||| || |||||||||    
T  1921 aatctacaaatagaaattttgtcttgtaaat-taagatgttacttatcacaaagtaatgattatccaattttttcataaaaacttatttcttttggatg 2018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 16986 - 16928
Alignment:
Q  241 tgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttatttta 299  Q
    ||||||||||| ||| ||||||||||||||||||  || |||  |||||||||||||||    
T  16986 tgcatttatatgatgcatttactacaaaactatacaaatgaacattgccatttatttta 16928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 722
Target Start/End: Original strand, 16838 - 16932
Alignment:
Q  628 atctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 722  Q
    ||||| |||||||  ||||||||||||||||| |  ||| || ||| ||||||||||||||| | || ||||| || |||||||| || ||||||    
T  16838 atctataaatagagtttctgtcttgaaaatataaactgtcactttttatcaagtaataattatataattttttaataaaaacttatttcttttgg 16932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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