View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20914_low_7 (Length: 507)
Name: NF20914_low_7
Description: NF20914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20914_low_7 |
 | |
|
| [»] scaffold0390 (1 HSPs) |
| | |
|
| [»] scaffold0786 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 18 - 491
Target Start/End: Original strand, 3004564 - 3005041
Alignment:
| Q |
18 |
gttttcaattatcttgatctgtttaggcattgccccttcttcatcacattctgttttacatgtattatgtctcccattttcatattatctcaagttgcaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3004564 |
gttttcaattatcttgatctgtttaggcattgccccttcttcatcacattctgttctacatgtattatgtctcccattttcatattatatcaagttgcaa |
3004663 |
T |
|
| Q |
118 |
gtaatatgaattgagttttaagatagttttctttgactgcgatattgcattaagagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtc |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3004664 |
gtaatatgaattgagttttaagatagttttctttgactgcgatattgcattaagagaacattgtttgccgatttaatcctatctgaaagaaagaagtgtc |
3004763 |
T |
|
| Q |
218 |
tccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacatat-ctaataaatattgggagatggtcctttggagatgctaattttat |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
3004764 |
tccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacatatcctaataaatattgggaggtggtcctttggagatgctaattttat |
3004863 |
T |
|
| Q |
317 |
agaaaattatgtttttgtttcaggtaaaacttattcagaagacaatggaatagaaagttgtctgtggtt---agtgagacgaaagctttaaggttgtgac |
413 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3004864 |
agaaaattatgtttttgtttcaggtaaaacttattcaaaagacaatggaatagaaagttgtctgtggttataagtgagacgaaagctttaaggttgtgac |
3004963 |
T |
|
| Q |
414 |
tggtgcggttttcagacaacagactgatgtggttcaactgtgttggcagtggtgatgtgttgcggtttgctacctatg |
491 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3004964 |
tggtgcggttttcggacaacagactgatgtggttcaactgtgttggcagtggtgatgtgctgcggtttgctacctatg |
3005041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 115 - 491
Target Start/End: Original strand, 54654663 - 54655040
Alignment:
| Q |
115 |
caagtaatatgaattgagttttaagatagttttctttgactgcgatattgcattaagagaacattgtttgccgatttaatcccatctgaaagaaagaagt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54654663 |
caagtaatatgaattgagttttaagatagttttctttgactacgatattgtatcaagagaacattgtttgtcgatttaatcccatctgaaagaaagaagt |
54654762 |
T |
|
| Q |
215 |
gtctccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacatatc-taataaatattgggagatggtcctttggagatgctaattt |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
54654763 |
gtctccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacatatcctaataaatattgggaggtggtcctttggagatgctaattt |
54654862 |
T |
|
| Q |
314 |
tatagaaaattatgtttttgtttcaggtaaaacttattcagaagacaatggaatagaaagttgtctgtggttagtgagacgaaagctttaaggttgtgac |
413 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54654863 |
tataaaaaattatgtttttgtttcaggtaaaacttattcagaagacaatggaatacaaagctgtctgtggttagtgagacgaaagctttaaggttgtgac |
54654962 |
T |
|
| Q |
414 |
tggtgcggttttcagacaacagactgatgtggttcaactgtgttggcagtggtgatgtgttgcggtttgctacctatg |
491 |
Q |
| |
|
| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
54654963 |
tagtgcggttttcagacagcagactgttgtggttcaactgtgttggcagtggtgatgtgctgcggtttgctacctatg |
54655040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 1065672 - 1065539
Alignment:
| Q |
172 |
agaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacata |
271 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||| ||| |||||||| || || |||||| |
|
|
| T |
1065672 |
agaacaatgtttgccgatttgatcccatct----aaaagaagtgtctctttgggatatgaaatcaatatactattttttgtgatgatgactatatacata |
1065577 |
T |
|
| Q |
272 |
t-ctaataaatattgggagatggtcctttggagatgct |
308 |
Q |
| |
|
| ||||| |||||| |||| ||||| | |||||||||| |
|
|
| T |
1065576 |
tcctaattaatatttggaggtggtcttgtggagatgct |
1065539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 42094406 - 42094340
Alignment:
| Q |
69 |
tgttttacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttt |
135 |
Q |
| |
|
|||| ||||||||| |||||| ||||||||||||||| |||||||||||||||| | |||||||||| |
|
|
| T |
42094406 |
tgttctacatgtataatgtcttccattttcatattatttcaagttgcaagtaatttaaattgagttt |
42094340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 54654619 - 54654664
Alignment:
| Q |
18 |
gttttcaattatcttgatctgtttaggcattgccccttcttcatca |
63 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54654619 |
gttttcaattatcttgatctgtttaggccttgccccttcttcatca |
54654664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 67 - 372
Target Start/End: Original strand, 51648950 - 51649252
Alignment:
| Q |
67 |
tctgttttacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgcgatattgca |
166 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
51648950 |
tctgttctacatgtattatgtctcccattttcatacgatttcaagttgcaagtaatatgaattgagttttaagatggttttctttgactgcaaaattgca |
51649049 |
T |
|
| Q |
167 |
ttaagagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatgacgatg---a |
263 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |
|
|
| T |
51649050 |
tttagagaacattgtttgccgatttgatcccatct----gaaagaagtgtctccatgggatatcaaatcaatatacta---tatgtgatgatgatgatca |
51649142 |
T |
|
| Q |
264 |
tgtacatat-ctaataaatattgggagatggtcctttggagatgctaattttatagaaaattatgtttttgtttcaggtaaaacttattcagaagacaat |
362 |
Q |
| |
|
||||||||| ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
51649143 |
tgtacatatcctaattaatatttagaggtggtcctttggagatgcaaattttatagaaaattatgtttttgtttcaggtaaaacttatttagaagacaat |
51649242 |
T |
|
| Q |
363 |
ggaatagaaa |
372 |
Q |
| |
|
| ||||||| |
|
|
| T |
51649243 |
gacatagaaa |
51649252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 8505273 - 8505207
Alignment:
| Q |
67 |
tctgttttacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagt |
133 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
8505273 |
tctgttctatatgtattatgtctcctattttcatacgatttcaagttgcaagtaatatgaattgagt |
8505207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 4866114 - 4866170
Alignment:
| Q |
101 |
attatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
4866114 |
attatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
4866170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 55039937 - 55039881
Alignment:
| Q |
101 |
attatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
55039937 |
attatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
55039881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 171; Significance: 1e-91; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 69 - 372
Target Start/End: Original strand, 20604307 - 20604611
Alignment:
| Q |
69 |
tgttttacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgcgatattgcatt |
168 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |
|
|
| T |
20604307 |
tgttctacatgtattatgtctcccattttcatacgatttcaagttgcaagtaatatgaattgagttttaagatggttttctttgactgcaaaattgcatt |
20604406 |
T |
|
| Q |
169 |
aagagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatgacgatg------ |
262 |
Q |
| |
|
||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
20604407 |
tagagaacattgtttgtcgatttgatcccatct----gaaagaagcgtctccatgggatatcaaatcaatatacta---tatgtgatgatgatgatcatg |
20604499 |
T |
|
| Q |
263 |
-atgtacatat-ctaataaatattgggagatggtcctttggagatgctaattttatagaaaattatgtttttgtttcaggtaaaacttattcagaagaca |
360 |
Q |
| |
|
|||||||||| ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
20604500 |
catgtacatatcctaattaatatttagaggtggtcctttggagatgcaaattttatagaaaattatgtttttgtttcaggtaaaacttatttagaagaca |
20604599 |
T |
|
| Q |
361 |
atggaatagaaa |
372 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
20604600 |
atggcatagaaa |
20604611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 29310805 - 29310880
Alignment:
| Q |
297 |
tttggagatgctaattttatagaaaattatgtttttgtttcaggtaaaacttattcagaagacaatggaatagaaa |
372 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
29310805 |
tttggagatgcaaattttatagaaaattatgtttttgtttcaggtaaaacttatttaaaagacaatggaatagaaa |
29310880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 35164380 - 35164463
Alignment:
| Q |
74 |
tacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||||||| |||| | |||| ||| ||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
35164380 |
tacatgtataatgttttccatattcgaattatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
35164463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 30402705 - 30402649
Alignment:
| Q |
101 |
attatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
30402705 |
attatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
30402649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 30409262 - 30409206
Alignment:
| Q |
101 |
attatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
30409262 |
attatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
30409206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 67 - 372
Target Start/End: Complemental strand, 30848233 - 30847932
Alignment:
| Q |
67 |
tctgttttacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgcgatattgca |
166 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
30848233 |
tctgttctacatgtattatgtctcccattttcatatgatttcaagttgcaagtaatatgaattgagttttaagatggttttctttgactgcaaaattgca |
30848134 |
T |
|
| Q |
167 |
ttaagagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatg---acgatga |
263 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||| |
|
|
| T |
30848133 |
attagagaacattgtttgccgatttgatcccatct----aaaagaagtgtctccacaggatatcaaatcaatatacta---tatgtgatgattatgatga |
30848041 |
T |
|
| Q |
264 |
tgtacatat-ctaataaatattgggagatggtcctttggagatgctaattttatagaaaattatgtttttgtttcaggtaaaacttattcagaagacaat |
362 |
Q |
| |
|
||||||||| ||||| ||| || |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
30848040 |
tgtacatatcctaattaatttttggaggtggtcctttggaga-gcaaattttatagaaaattatgtttttgtttcaggtaaaactaatttagaagacaat |
30847942 |
T |
|
| Q |
363 |
ggaatagaaa |
372 |
Q |
| |
|
|||||||||| |
|
|
| T |
30847941 |
ggaatagaaa |
30847932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 11144349 - 11144405
Alignment:
| Q |
101 |
attatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
11144349 |
attatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
11144405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 1660680 - 1660597
Alignment:
| Q |
74 |
tacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||||||| |||| | |||| ||| ||||| | || ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
1660680 |
tacatgtataatgttttccatattcgaattattttaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
1660597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 1599762 - 1599698
Alignment:
| Q |
74 |
tacatgtattatgtctcccattttcatattatctcaagttgcaagtaatatgaattgagttttaa |
138 |
Q |
| |
|
||||||||| |||||| |||| ||| ||||| |||| ||||||||||| | ||||||||||||| |
|
|
| T |
1599762 |
tacatgtataatgtcttccatattcgaattatttcaaattgcaagtaatttaaattgagttttaa |
1599698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0390 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0390
Description:
Target: scaffold0390; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 171 - 313
Target Start/End: Original strand, 984 - 1123
Alignment:
| Q |
171 |
gagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacat |
270 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||||| ||||| |||||||| || || ||||| |
|
|
| T |
984 |
gagaacaatgtttgccgatttgatcccatctgaaa----gaagtgtctctttgggatatgaaatcaatatacaactttttgtgatgatgactatatacat |
1079 |
T |
|
| Q |
271 |
at-ctaataaatattgggagatggtcctttggagatgctaattt |
313 |
Q |
| |
|
|| ||||| |||||| |||| |||||||||||||||||| |||| |
|
|
| T |
1080 |
atcctaattaatatttggaggtggtcctttggagatgcttattt |
1123 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 313
Target Start/End: Complemental strand, 22140296 - 22140157
Alignment:
| Q |
171 |
gagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacat |
270 |
Q |
| |
|
||||||| ||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||| ||||| |||||||| || || ||||| |
|
|
| T |
22140296 |
gagaacaatgtttgccgatttgatcccatc----cgaaagaagtgtctctttgggatatgaaatcaatatacaactttttgtgatgatgactatatacat |
22140201 |
T |
|
| Q |
271 |
at-ctaataaatattgggagatggtcctttggagatgctaattt |
313 |
Q |
| |
|
|| ||||| |||||| |||| |||||||||||||||||| |||| |
|
|
| T |
22140200 |
atcctaattaatatttggaggtggtcctttggagatgcttattt |
22140157 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0786 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0786
Description:
Target: scaffold0786; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 171 - 313
Target Start/End: Original strand, 2452 - 2591
Alignment:
| Q |
171 |
gagaacattgtttgccgatttaatcccatctgaaagaaagaagtgtctccatgggatatcaaatcaatatactactttatgtgatgacgatgatgtacat |
270 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||||||| |||||||||| |||||||| |||||||||||| ||||| |||||||| || || ||||| |
|
|
| T |
2452 |
gagaacaatgttttccgatttgatcccatctgaaa----gaagtgtctcattgggatatgaaatcaatatacaactttttgtgatgatgactatatacat |
2547 |
T |
|
| Q |
271 |
at-ctaataaatattgggagatggtcctttggagatgctaattt |
313 |
Q |
| |
|
|| ||||| ||| || |||| |||||||||||||||||| |||| |
|
|
| T |
2548 |
atcctaattaatctttggaggtggtcctttggagatgcttattt |
2591 |
T |
|
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Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 31449287 - 31449326
Alignment:
| Q |
291 |
tggtcctttggagatgctaattttatagaaaattatgttt |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31449287 |
tggtcctttggagatgctaattttatagaaaattatgttt |
31449326 |
T |
|
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Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 13949966 - 13950022
Alignment:
| Q |
101 |
attatctcaagttgcaagtaatatgaattgagttttaagatagttttctttgactgc |
157 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
13949966 |
attatttcaaattgcaagtaatttaaattgagttttaaggtagttttctttgactgc |
13950022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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