View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20919_low_21 (Length: 408)
Name: NF20919_low_21
Description: NF20919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20919_low_21 |
 | |
|
| [»] scaffold1749 (1 HSPs) |
| | |
|
| [»] scaffold0428 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 365; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 18 - 394
Target Start/End: Original strand, 31501226 - 31501602
Alignment:
| Q |
18 |
aaaaattaagcttactcagatggctagcagcaataactcctcttcttcggctcttgtgactgtgacactgccaaggaggaagaattattatgatgcgttt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501226 |
aaaaattaagcttactcagatggctagcagcaacaactcctcttcttcggctcttgtgactgtgacactgccaaggaggaagaattattatgatgcgttt |
31501325 |
T |
|
| Q |
118 |
gtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatc |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501326 |
gtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatc |
31501425 |
T |
|
| Q |
218 |
ttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttg |
317 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
31501426 |
ttccaaaaggtgaatccatagcatccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaatttg |
31501525 |
T |
|
| Q |
318 |
gtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501526 |
gtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
31501602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 33 - 394
Target Start/End: Original strand, 31496077 - 31496432
Alignment:
| Q |
33 |
tcagatggctagcagcaataactcctcttcttcggctcttgtgactgtgacactgccaaggaggaagaattattatgatgcgtttgtcacttttagaggt |
132 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| ||||| ||||| | ||||||||||| ||| ||||||| | ||||||||| ||||||||| |
|
|
| T |
31496077 |
tcagatggctagcagcagcaactccacttcttcagctctagtgac------atcgccaaggaggagcaatcattatgacgtgtttgtcacctttagaggt |
31496170 |
T |
|
| Q |
133 |
gaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaat |
232 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
31496171 |
gaggacactcgcaacaatttcactgatcatctttttgataccttccacagagaaggcatttctgcatttagagatgacactaatcttccaaaaggtgaat |
31496270 |
T |
|
| Q |
233 |
ccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaatt |
332 |
Q |
| |
|
|||||| ||| |||| ||| ||||||||||| | ||| | ||||||||| |||| | |||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
31496271 |
ccataggacctaagctcctttgtgcaattgaaaactctcaggtttttgttgtggtcttatcaaggaactatgctttctcaacttcgtgcttgcaagaatt |
31496370 |
T |
|
| Q |
333 |
agaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
|||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31496371 |
agaaaagatccttgaatgggtcaaggtatctaaaaaacatgttctgcctgttttctatgatg |
31496432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 33 - 332
Target Start/End: Complemental strand, 31030711 - 31030418
Alignment:
| Q |
33 |
tcagatggctagcagcaataactcctcttcttcggctcttgtgactgtgacactgccaaggaggaagaattattatgatgcgtttgtcacttttagaggt |
132 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||| || | | ||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
31030711 |
tcagatggctagcagcagcaactcctcttcttcagctcttatggc------attgccaaggaggaagaattattatgatgtgtttgtcacctttagaggc |
31030618 |
T |
|
| Q |
133 |
gaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaa |
231 |
Q |
| |
|
||||| |||||| ||| |||| | |||||||||||| |||| ||||| ||| |||||||| |||||||||| || ||||||||||||| |||||||||| |
|
|
| T |
31030617 |
gaagatactcgcttcaacttcattgatcatctttttgctgcccttcaa-agaaaaggcatttttgcatttagagacgacactaatcttcaaaaaggtgaa |
31030519 |
T |
|
| Q |
232 |
tccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaat |
331 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| ||| | |||| ||||||||||||| | |||||||||||||||||||||||||||| ||||| |
|
|
| T |
31030518 |
tccataccacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactatgcttcctcaacttggtgcttgcgagaat |
31030419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 33 - 332
Target Start/End: Complemental strand, 31020830 - 31020537
Alignment:
| Q |
33 |
tcagatggctagcagcaataactcctcttcttcggctcttgtgactgtgacactgccaaggaggaagaattattatgatgcgtttgtcacttttagaggt |
132 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||| || | | ||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
31020830 |
tcagatggctagcagcagcaactcctcttcttcagctcttatggc------attgccaaggaggaagaattattatgatgtgtttgtcacctttagaggc |
31020737 |
T |
|
| Q |
133 |
gaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaa |
231 |
Q |
| |
|
||||| |||||| ||| |||| | |||||||||||| |||| ||||| ||| |||||||| |||||||||| || ||| ||||||||| |||||||||| |
|
|
| T |
31020736 |
gaagatactcgcttcaacttcattgatcatctttttgctgcccttcaa-agaaaaggcatttttgcatttagagacgacgctaatcttcaaaaaggtgaa |
31020638 |
T |
|
| Q |
232 |
tccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaat |
331 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| ||| | |||| ||||||||||||| | |||||| ||||||||||||||||||||| ||||| |
|
|
| T |
31020637 |
tccataccacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactattcttcctcaacttggtgcttgcgagaat |
31020538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 345
Target Start/End: Original strand, 31488783 - 31489028
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatg-ccttcaacagagaaggcattcttgca |
198 |
Q |
| |
|
||||||||||| | ||||||||| || ||||||||||| |||||| ||| || ||| |||||||||||| || ||||||| ||| |||||||| |||| |
|
|
| T |
31488783 |
aattattatgacgtgtttgtcaccttcagaggtgaagatactcgcttcaactttactgatcatctttttgctgcccttcaa-agaaaaggcatttttgcg |
31488881 |
T |
|
| Q |
199 |
tttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaagga |
298 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| ||| | |||| ||||||||||||| | | |
|
|
| T |
31488882 |
tttagagatgacactaagcttcaaaaaggtgaatcgatagcacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaa |
31488981 |
T |
|
| Q |
299 |
actatgcttcctcaacttggtgcttgcaagaattagaaaagatcctt |
345 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||| | |||||| |
|
|
| T |
31488982 |
actatgcttcctcaacttggtgcttgcgagaattggaatacatcctt |
31489028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 127 - 394
Target Start/End: Original strand, 31476225 - 31476492
Alignment:
| Q |
127 |
agaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaag |
226 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||||||| || | | |||| || ||||||||||||||||||||||||||| ||||| |
|
|
| T |
31476225 |
agaggtgaagatactcgcaacaatttcactgatttcctttttgatgccctcgaagaaaaaggtgtttttgcatttagggatgacactaatcttcaaaaag |
31476324 |
T |
|
| Q |
227 |
gtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgca |
326 |
Q |
| |
|
|||||||||||||||| || || ||| ||||||||||| ||| | |||| |||| |||| | |||| |||||| |||| |||||||||||||||| | |
|
|
| T |
31476325 |
gtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaacttggtgcttgaa |
31476424 |
T |
|
| Q |
327 |
agaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
|||||| ||| | ||||| || || || | ||||||||| ||||||| ||||| |||||||||| |
|
|
| T |
31476425 |
agaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatg |
31476492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 332
Target Start/End: Complemental strand, 31151272 - 31151041
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcat |
199 |
Q |
| |
|
||||||||||| | |||||||| ||||||||| |||| || ||| ||| |||||| |||||||||||| |||| | | ||| || |||| || ||| |
|
|
| T |
31151272 |
aattattatgacgtgtttgtcagctttagaggtaaagatacacgcctcaacttcactgatcatctttttgctgccctgcaaagaaaat-cattttttcat |
31151174 |
T |
|
| Q |
200 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
299 |
Q |
| |
|
| |||||||| ||||| || |||||||||||||||||||| || || ||||| ||||||||||| ||| | |||||||||| ||| |||| | ||| |
|
|
| T |
31151173 |
tcagggatgatactaagctgaagaaaggtgaatccatagcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaa |
31151074 |
T |
|
| Q |
300 |
ctatgcttcctcaacttggtgcttgcaagaatt |
332 |
Q |
| |
|
||||||||||||| |||||| |||| |||||| |
|
|
| T |
31151073 |
ctatgcttcctcagtttggtgtttgcgagaatt |
31151041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 394
Target Start/End: Complemental strand, 31529344 - 31529136
Alignment:
| Q |
186 |
aggcattcttgcatttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcg |
285 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||| || || |||||||| || |||| ||| | ||| ||| |
|
|
| T |
31529344 |
aggcattgttgcatttagagatgacactaagcttaagaaaggtgaatctatagcacctgaactccttcgtgctatcgaagcctctcggactttcattgtt |
31529245 |
T |
|
| Q |
286 |
gtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttt |
385 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||| ||||| || | |||||| | ||||| || | ||| ||||| |||||| ||||||| |
|
|
| T |
31529244 |
gtcttctcaaacaactatgcttcctcaacttggtgcttgcgggaattgcaatacatccttcattgcgtacaactttctggaaaacgtgttctccctgttt |
31529145 |
T |
|
| Q |
386 |
tctatgatg |
394 |
Q |
| |
|
||||||||| |
|
|
| T |
31529144 |
tctatgatg |
31529136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 325
Target Start/End: Complemental strand, 31160147 - 31159946
Alignment:
| Q |
124 |
tttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcatttagggatgacactaatcttcca |
222 |
Q |
| |
|
|||||||| ||||||| | ||||||||| | |||||||||||| |||| ||||| ||| ||||||| ||||||| |||||||| |||| || |
|
|
| T |
31160147 |
tttagaggccaagacacacacaacaattttgccgatcatctttttgctgcccttcaa-agaaaaggcatcgttgcattcagggatgattctaacctgaag |
31160049 |
T |
|
| Q |
223 |
aaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgct |
322 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||| || | ||||| ||| || |||||| ||||||||||||||||| ||||||| |
|
|
| T |
31160048 |
aaaggtgaatccatagcacccgagctccttcatgcaattgaagcctcaaaggtttttattgtactcttctcaaaaaactatgcttcctcaacatggtgct |
31159949 |
T |
|
| Q |
323 |
tgc |
325 |
Q |
| |
|
||| |
|
|
| T |
31159948 |
tgc |
31159946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 31162353 - 31162254
Alignment:
| Q |
297 |
gaactatgcttcctcaact--tggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||| | ||| | | || || ||| ||||||||||||||||||||||||| |
|
|
| T |
31162353 |
gaactatgcttcctcaactattggtgcttgcaagaattagaatccatccttcactgcattaaagtctccgaaaggcatgttctgcctgttttctatgatg |
31162254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 104 - 394
Target Start/End: Original strand, 17437875 - 17438165
Alignment:
| Q |
104 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttag |
203 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| |||||||||||||||||| || ||||||||| ||| | | ||| ||| |||| |||||||| | |
|
|
| T |
17437875 |
attatgatgtgtttgtcacctttagaggtgaagatactcgcaacaatttcactgattttctttttgacgcccttgaaagaaaagacatttttgcatttcg |
17437974 |
T |
|
| Q |
204 |
ggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactat |
303 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| | | ||||||||||| ||||| |||| ||| | ||||||||||||| ||||||| ||||| |
|
|
| T |
17437975 |
agatgacactaatcttcaaaaaggtgaatccataggatctgagcttcttcgagcaatagaaggatctcaggtttttgttgcggttttctcaagatactat |
17438074 |
T |
|
| Q |
304 |
gcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||||||||| ||||||||| || || | |||||||||||| |||||||||||||||| |
|
|
| T |
17438075 |
gcttcctcaacatggtgtttggaagaattagaaaagatatgtgaatgcgttcaggtgccaggaaaacatgttcttcctgttttctatgatg |
17438165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 104 - 394
Target Start/End: Complemental strand, 33361392 - 33361102
Alignment:
| Q |
104 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcattta |
202 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| | | |||||||| ||| |||| |
|
|
| T |
33361392 |
attatgatgtgtttgtcatctttagaggtgaagacactcgcaacaatttcactgattttctttttgatgcccttcaa-acaaaaggcattattgtatttt |
33361294 |
T |
|
| Q |
203 |
gggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaacta |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||| |||| ||| | |||||||||| || | ||||| ||||| |
|
|
| T |
33361293 |
tggatgacactaatcttccaaaaggtgaatccatcggacccgagctcattcgagcaatcgaaggatctcaggtttttgttgcattcttttcaagaaacta |
33361194 |
T |
|
| Q |
303 |
tgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||| ||||||| | | | ||| |||||||||||| |||||||||||||||| |
|
|
| T |
33361193 |
tgcttcctcaacatggtgtttgcaagaattagaaaagatatgtgaatgcattaagggatcaggaaaacatgttcttcctgttttctatgatg |
33361102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 101 - 394
Target Start/End: Original strand, 31566307 - 31566600
Alignment:
| Q |
101 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
200 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||| | | | |||| ||| ||| ||| |
|
|
| T |
31566307 |
attattatgatgtatttgtcactttcagaggtgaagacactcgcaacaatttcattgattttctttttgatgcctttgaaacaaaaggtatttttgtatt |
31566406 |
T |
|
| Q |
201 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
300 |
Q |
| |
|
| ||||||| || ||||||| ||||||||||||||||| || ||||||||||| ||||| ||| ||| || |||||||||| ||| ||||||| || |
|
|
| T |
31566407 |
tcgggatgatacaaatcttcaaaaaggtgaatccatagggcctgagcttcttcgagcaatccaaggatctcatgtttttgttgccgtcttctcaagaaat |
31566506 |
T |
|
| Q |
301 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| ||||| ||||||| | | | |||| ||||||||||||| | |||||||||||||| |
|
|
| T |
31566507 |
tatgcttcctcgacatggtgcttgcaagaattagagaagatttgtgaatgcattgaggaatctgaaaaacatgttcttcttgttttctatgatg |
31566600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 100 - 393
Target Start/End: Complemental strand, 33412816 - 33412523
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgc-cttcaacagagaaggcattcttgca |
198 |
Q |
| |
|
||||||||||||| ||||||||| || |||||||||||||||||||||||||||||| || ||||||||||||| ||| || | |||| ||| |||| |
|
|
| T |
33412816 |
aattattatgatgtgtttgtcaccttcagaggtgaagacactcgcaacaatttcactgattatctttttgatgcacttgaaacca-aaggtatttatgca |
33412718 |
T |
|
| Q |
199 |
tttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaagga |
298 |
Q |
| |
|
|||||||||||||| |||||| |||||||||| ||||| ||| ||||| ||||||||||| |||| ||| | |||| || || ||| | ||||||| |
|
|
| T |
33412717 |
tttagggatgacacaaatcttaaaaaaggtgaagtcataggacctgagctccttcgtgcaatcgaaggatctcaggttttcgtcgcagtcttttcaagga |
33412618 |
T |
|
| Q |
299 |
actatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgat |
393 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||| |||||| || || | | || ||||||| ||||| |||||||| |||||| |
|
|
| T |
33412617 |
actatgcttcctcaacatggtgcctgcaagaattagaaaagatctgtgaatgtgttcagggacctgaaaaacacgttcttcctgttttttatgat |
33412523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 100 - 394
Target Start/End: Complemental strand, 33265780 - 33265486
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgca |
198 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||||||| ||||| | | |||||||| ||| | |
|
|
| T |
33265780 |
aattattatgatgtatttgtcaccttcagaggtgaagatactcggaacaatttcacagattttctttttgatgcccttcaa-acaaaaggcattattgta |
33265682 |
T |
|
| Q |
199 |
tttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaagga |
298 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| |||| ||| | |||||||||||||| | |||| | |
|
|
| T |
33265681 |
ttttcggatgacactaatcttccaaaaggtgaatccattggacccgagctccttcgagcaatcgaaggatctcaagtttttgttgcggtcttttcaataa |
33265582 |
T |
|
| Q |
299 |
actatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||||| ||||||||| | | ||| |||||||||||| || ||||||||||||| |
|
|
| T |
33265581 |
actatgcttcctcaacatggtgtttacaagaattagaaaagatatgtgaatgcgttaagggatcaggaaaacatgttcttccagttttctatgatg |
33265486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 100 - 394
Target Start/End: Complemental strand, 33274924 - 33274630
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgca |
198 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||||||| ||||| | | |||||||| ||| | |
|
|
| T |
33274924 |
aattattatgatgtatttgtcaccttcagaggtgaagatactcggaacaatttcacagattttctttttgatgcccttcaa-acaaaaggcattattgta |
33274826 |
T |
|
| Q |
199 |
tttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaagga |
298 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| |||| ||| | |||||||||||||| | |||| | |
|
|
| T |
33274825 |
ttttcggatgacactaatcttccaaaaggtgaatccattggacccgagctccttcgagcaatcgaaggatctcaagtttttgttgcggtcttttcaataa |
33274726 |
T |
|
| Q |
299 |
actatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||||| ||||||||| | | ||| |||||||||||| || ||||||||||||| |
|
|
| T |
33274725 |
actatgcttcctcaacatggtgtttacaagaattagaaaagatatgtgaatgcgttaagggatcaggaaaacatgttcttccagttttctatgatg |
33274630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 103 - 394
Target Start/End: Complemental strand, 33307381 - 33307090
Alignment:
| Q |
103 |
tattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcattta |
202 |
Q |
| |
|
|||||||||| ||||||||| || ||||||||||||||||||||||| || ||| || ||||||||||||| | | | | |||||||| |||||||| |
|
|
| T |
33307381 |
tattatgatgtgtttgtcaccttcagaggtgaagacactcgcaacaactttactgattttctttttgatgcccttgaaacaaaaggcatttttgcatttc |
33307282 |
T |
|
| Q |
203 |
gggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaacta |
302 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| |||| ||| ||||| ||||| ||||| |||| ||| |||||||||| ||| ||||||||||||| |
|
|
| T |
33307281 |
gggatgacactaatcttcaaaagggtgaatctatagaacctgagctccttcgagcaatcgaaggatctcgggtttttgttgcagtcttctcaaggaacta |
33307182 |
T |
|
| Q |
303 |
tgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||| ||||| | ||||||| || ||| | ||||||| |||| |||||||| ||||||| |
|
|
| T |
33307181 |
tgcttcctcaacatggtgcctgcaagaattagagaagatatgtaaatgcgttcagagatccagaaaacatattcttcctgttttttatgatg |
33307090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 394
Target Start/End: Complemental strand, 33060449 - 33060159
Alignment:
| Q |
104 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttag |
203 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| |||||||||||||||||| || ||||||||||||| | | | | |||||||| | | |||| | |
|
|
| T |
33060449 |
attatgatgtgtttgtcacctttagaggtgaagatactcgcaacaatttcactgattttctttttgatgcccttgaaacaaaaggcattatggtatttcg |
33060350 |
T |
|
| Q |
204 |
ggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactat |
303 |
Q |
| |
|
||||| || |||||||| ||||||||||| ||||| ||| |||||| |||||||||| ||| ||| | ||| |||||| || |||||| ||||||| |
|
|
| T |
33060349 |
ggatgtcattaatcttcaaaaaggtgaatgcataggacctgagctttttcgtgcaatcgaaatatctcaggtttacgttgcgatcttctcaaagaactat |
33060250 |
T |
|
| Q |
304 |
gcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||| | | | || |||||||||||| |||||||||||||||| |
|
|
| T |
33060249 |
gcttcctcaacgtggtgcttgcaagaattagaaaagatatgtgaatgcattaaggggtcgggaaaacatgttcttcctgttttctatgatg |
33060159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 394
Target Start/End: Complemental strand, 33403509 - 33403215
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcat |
199 |
Q |
| |
|
|||||||| |||| |||| |||| |||||||||||||||||||| |||||||||||| || ||||||||||||| | | | | |||||||| |||||| |
|
|
| T |
33403509 |
aattattacgatgtgtttatcacctttagaggtgaagacactcggaacaatttcactgattttctttttgatgcccttgaaacaaaaggcatttttgcat |
33403410 |
T |
|
| Q |
200 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
299 |
Q |
| |
|
|| | |||||||||||||||| | | ||||||||| ||| ||||||||||||||| ||||| ||| | | | |||| |||| ||| | |||||||| |
|
|
| T |
33403409 |
ttcgagatgacactaatcttcaacagggtgaatccttagaacccgagcttcttcgagcaatcaaaggatttcaggttttcgttgtcgtcttttcaaggaa |
33403310 |
T |
|
| Q |
300 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||| ||||||||| | | ||| |||||||||||| | |||||||||||||||| |
|
|
| T |
33403309 |
ctatgcttcctcaacatggtgcttaaaagaattagagaagatatgtgaatgcgttaagggatccaaaaaacatgttattcctgttttctatgatg |
33403215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 394
Target Start/End: Complemental strand, 33390970 - 33390677
Alignment:
| Q |
101 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
200 |
Q |
| |
|
|||||||||||| ||||||||| || ||||||||||||||||||||||||||| | || ||||||||||||| | | | | |||||||||||| ||| |
|
|
| T |
33390970 |
attattatgatgtgtttgtcaccttccgaggtgaagacactcgcaacaatttcattgattttctttttgatgccctggaaacaaaaggcattcttgtatt |
33390871 |
T |
|
| Q |
201 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
300 |
Q |
| |
|
| ||||| ||| ||||||| ||||||||||||||||| ||| || ||||||| |||| |||| ||| | ||| ||||||||| ||||||| ||| |
|
|
| T |
33390870 |
tcgggataacagaaatcttcaaaaaggtgaatccataggacctgaacttcttcaatcaatcgaaggatctcaggtttatgttgcggttttctcaagaaac |
33390771 |
T |
|
| Q |
301 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
||||||| |||||| ||||| ||||||||| |||| ||||| ||||| ||||| | ||| |||||| |||||| |||||||| ||||||| |
|
|
| T |
33390770 |
tatgctttctcaacatggtgtttgcaagaaatagagaagatttgggaatgtgtccaaggatccgaaaaacttgttcttcctgttttttatgatg |
33390677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 394
Target Start/End: Complemental strand, 33288459 - 33288179
Alignment:
| Q |
114 |
gtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacact |
213 |
Q |
| |
|
|||| |||| |||||||| || ||||||||||||||||||||| | |||| || ||||| | || | | | || ||| |||||||||||||||||| |
|
|
| T |
33288459 |
gtttatcacctttagaggcgatgacactcgcaacaatttcactggttatctattagatgctcttaaaacaaacggtatttatgcatttagggatgacacc |
33288360 |
T |
|
| Q |
214 |
aatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaa |
313 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||| ||||| ||||| |||| || | |||| ||||| || ||||||| |||||||||||||||| |
|
|
| T |
33288359 |
aatcttcaaaaaggtgaatccataggacctgagctccttcgagcaatcgaaggatcccaggttttcgttgcagtattctcaagaaactatgcttcctcaa |
33288260 |
T |
|
| Q |
314 |
cttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
394 |
Q |
| |
|
| ||||||||||| |||||||||||||| |||||| || || ||||| | |||||| |||| || ||||||||||||| |
|
|
| T |
33288259 |
catggtgcttgcaggaattagaaaagatatgtgaatgtgttcatgtatcaagaaaacacattcttccagttttctatgatg |
33288179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 100 - 341
Target Start/End: Original strand, 33641799 - 33642040
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcat |
199 |
Q |
| |
|
||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||| || ||||||||||||| | | | |||||||| | | || |
|
|
| T |
33641799 |
aattattatgatgtgtttgtcacctacagaggtgaagacactcgcaacaatttgactgattttctttttgatgcccttgaatcaaaaggcattatggtat |
33641898 |
T |
|
| Q |
200 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
299 |
Q |
| |
|
|| ||||||||| |||||||| ||||||||||| |||| | | ||||||||||| ||||| ||| ||| || ||| || || ||| ||||||| || |
|
|
| T |
33641899 |
ttcgggatgacattaatcttcaaaaaggtgaatatataggatctgagcttcttcgagcaatcgaaagatctcatgtttacgtagcagtcttctcaagaaa |
33641998 |
T |
|
| Q |
300 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagat |
341 |
Q |
| |
|
||||||||||||||| |||||| | ||||||||||| ||||| |
|
|
| T |
33641999 |
ctatgcttcctcaacatggtgccttcaagaattagagaagat |
33642040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 12782351 - 12782164
Alignment:
| Q |
147 |
caatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaatccatagcacccga |
245 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||| ||| || | ||| || |||| || |||||||||||||||| ||||||| | ||||||||| |||| |
|
|
| T |
12782351 |
caatttcactgatcatctttttggtgcccttcaa-agaaaaagaatttttacattcagagatgacactaatcttcaaaaaggtaattccatagcatccga |
12782253 |
T |
|
| Q |
246 |
gcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaattag |
334 |
Q |
| |
|
|| ||| |||||||||| ||| | |||| ||| || |||| | ||||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
12782252 |
cctcattcaagcaattgaaggctctcaggttttcattgttgtattctctaaaaactatgcttcttcaacttggtgtttgcgagaattag |
12782164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 12785790 - 12785693
Alignment:
| Q |
147 |
caatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaatccatagcacccg |
244 |
Q |
| |
|
||||||||| |||||||||||| |||| | | ||| ||||||| |||||| || ||||||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
12785790 |
caatttcaccgatcatctttttgctgccctacaaagacgaggcattaatgcattcagagatgacactaaacttaaaaaaggtgaattcatagcacccg |
12785693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 12781450 - 12781402
Alignment:
| Q |
297 |
gaactatgcttcctcaacttggtgcttgcaagaattagaaaagatcctt |
345 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| ||| | |||||| |
|
|
| T |
12781450 |
gaactatgcttcctcaacttggtgtttgcgagaattggaatacatcctt |
12781402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 13608290 - 13608326
Alignment:
| Q |
133 |
gaagacactcgcaacaatttcacttatcatctttttg |
169 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
13608290 |
gaagacacgcgcaacaatttcactgatcatctttttg |
13608326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 100 - 391
Target Start/End: Complemental strand, 1044 - 753
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcat |
199 |
Q |
| |
|
|||| |||||| | ||||||||| || ||||||||||| |||||||||||||||||| || |||||||| |||| | | ||| |||| ||| ||| | |
|
|
| T |
1044 |
aattgttatgacgtgtttgtcaccttcagaggtgaagatactcgcaacaatttcactaattttctttttgctgcccttgaaagaaaaggtatttatgctt |
945 |
T |
|
| Q |
200 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
299 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||||||||||| ||| ||||| ||||| |||| |||| ||| | |||| ||||| ||| | ||||| || |
|
|
| T |
944 |
tcagggatgacacaaatcttccaaagggtgaatccataggacctgagctccttcgaacaatcgaaggatctcaggttttcgttgctgtcttatcaagaaa |
845 |
T |
|
| Q |
300 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatg |
391 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||| ||||| ||||||| || | | |||| |||| ||||||| ||| ||||||||| |
|
|
| T |
844 |
ctatgcttcttcaacatggtgcctgcaagaattagagaagatttgtgaatgcatcaagggatctggaaaatatgttcttcctattttctatg |
753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 100 - 391
Target Start/End: Complemental strand, 9805 - 9514
Alignment:
| Q |
100 |
aattattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcat |
199 |
Q |
| |
|
|||| |||||| | ||||||||| || ||||||||||| |||||||||||||||||| || |||||||| |||| | | ||| |||| ||| ||| | |
|
|
| T |
9805 |
aattgttatgacgtgtttgtcaccttcagaggtgaagatactcgcaacaatttcactaattttctttttgctgcccttgaaagaaaaggtatttatgctt |
9706 |
T |
|
| Q |
200 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
299 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||||||||||| ||| ||||| ||||| |||| |||| ||| | |||| ||||| ||| | ||||| || |
|
|
| T |
9705 |
tcagggatgacacaaatcttccaaagggtgaatccataggacctgagctccttcgaacaatcgaaggatctcaggttttcgttgctgtcttatcaagaaa |
9606 |
T |
|
| Q |
300 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatg |
391 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||| ||||| ||||||| || | | |||| |||| ||||||| ||| ||||||||| |
|
|
| T |
9605 |
ctatgcttcttcaacatggtgcctgcaagaattagagaagatttgtgaatgcatcaagggatctggaaaatatgttcttcctattttctatg |
9514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 6473386 - 6473323
Alignment:
| Q |
106 |
tatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttg |
169 |
Q |
| |
|
||||||| |||||| | ||| |||| |||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
6473386 |
tatgatgtgtttgtgagctttcgaggcgaagacacgcgcaacaatttcactgatcatctttttg |
6473323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University