View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2091_high_3 (Length: 308)
Name: NF2091_high_3
Description: NF2091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2091_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 15990032 - 15989728
Alignment:
| Q |
1 |
gttagaccatgtttctcggccaacgcaagatacttaatagttgcttcctgaaatacaaacatgaaaaaatagaagaaagttattaattggttatcttgtt |
100 |
Q |
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| T |
15990032 |
gttagaccatgtttctcggccaactcaatatacttaatagttgcttcctgaaataaaaacatgaaaaaatagaagaaagttattaattggttatcttgtt |
15989933 |
T |
|
| Q |
101 |
aaccgtggtttagagtatagtctgaaccaatgttataaaaactgaactggatggttcagttatttgagcagttcaattgtggttttgtccgagtggttta |
200 |
Q |
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| T |
15989932 |
aaccgtggtttagagtatagtctgaaccaatgttataaaaactgaactggatggttcagttatttgagcagttcaattgtggttttgtccgagtggttta |
15989833 |
T |
|
| Q |
201 |
aagtcacttaacctgacccagaagtcatgctggtacgatgtctaattcggttttgnnnnnnncggtcaaaactttaaatacaagaactagaagtattatc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
15989832 |
aagtcacttaacctgacccagaagtcatgctggtacgatgtctaattcggttttgaaaaaaacggtcaaaactttaaatacaagaactagaagtattatg |
15989733 |
T |
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| Q |
301 |
taccc |
305 |
Q |
| |
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||||| |
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| T |
15989732 |
taccc |
15989728 |
T |
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