View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2091_high_5 (Length: 245)
Name: NF2091_high_5
Description: NF2091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2091_high_5 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 23995060 - 23994826
Alignment:
| Q |
12 |
tcaatctcatcatcaccatcatgtaagcattaagttatcataaa-gaagagaaaaagagaaaagacataaacttgcagaactttataaaatttattattg |
110 |
Q |
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| T |
23995060 |
tcaatcttatcatcagcatcatgtaagcattaagttatcataaaagaagagaaaaagagaaatgacataaacttgcagaactttataaaatttattattg |
23994961 |
T |
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| Q |
111 |
aaaaataaattacaagatcataatctcggggactagaccaaaacccaaagaaacacttgaacaagtacaaaagaactgtctcattaaaaacaataccaga |
210 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
23994960 |
aaaaataaattacaagatcataatctcggggattagaccaaaacccaaagaaacacttgaacaagtacaaaagaactatctcattaaaaacaataccaga |
23994861 |
T |
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| Q |
211 |
agaatccaaatggatcggatccatggtaaagtaaa |
245 |
Q |
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| T |
23994860 |
agaatccaaatggatcggatccatggtaaagtaaa |
23994826 |
T |
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