View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2091_low_11 (Length: 238)
Name: NF2091_low_11
Description: NF2091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2091_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 15990039 - 15990260
Alignment:
| Q |
1 |
ccagctcgcgcttggatttgtgagagatcgtccattcatgacgagttcaattatcggtgcaacttctgtggaccaactaaaagaagacatagatgctttt |
100 |
Q |
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| T |
15990039 |
ccagctcgcgcttggatttgtgagagatcgtccattcatgacgagttcaattatcggtgcaacttctgtggaccaactaaaagaagacatagatgctttt |
15990138 |
T |
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| Q |
101 |
acaacaaccgaacgacctttgccagcagaagtcatgacaggaattgaagctatattcaagagatacaaagatcctagcatcctttaaagactataccttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15990139 |
acaacaaccgaacgacctttgccagcagaagtcatgacaggaattgaagctatcttcaagagatacaaagatcctagcatcctttaaagactataccttt |
15990238 |
T |
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| Q |
201 |
gaatttttcgggatattcttat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
15990239 |
gaatttttcgggatattcttat |
15990260 |
T |
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