View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2091_low_12 (Length: 238)
Name: NF2091_low_12
Description: NF2091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2091_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 49302046 - 49301835
Alignment:
| Q |
15 |
atatctgaacttccacattcccttctatattctagtgtgataccagataattggtgactctctagaatttggtctggaatggtctgtaaaataatcaata |
114 |
Q |
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| T |
49302046 |
atatctgaacttccacattcccttctatattctagtgtgataccagataattggtgactctctagaatttggtctggaatggtctgtaaaataatcaata |
49301947 |
T |
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| Q |
115 |
atnnnnnnnntgaaagttaactatttgattatattctaataatggtataaatattgaagaatgataatgagtatattaatattgttttgaatttacctct |
214 |
Q |
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| T |
49301946 |
ataaaaaaaatgaaagttaactatttgattatattctaataatggtataaatattgaagaatgataatgagtatattaatattgttttgaatttacctct |
49301847 |
T |
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| Q |
215 |
agcatccacctt |
226 |
Q |
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| T |
49301846 |
agcatccacctt |
49301835 |
T |
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