View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2091_low_13 (Length: 230)
Name: NF2091_low_13
Description: NF2091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2091_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 39782862 - 39783088
Alignment:
| Q |
1 |
tgtcctccatcttcttgttttgtttatatcacttgatccagttgaagatgaagacaaactatgtcctgattctgaagttagtggtgtttcaattttcttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39782862 |
tgtcctccatcttcttgttttgtttatatcacttgatccagttgaagatgaagacaaactatgtcctgattctgaagttagtggtgtttcaattttcttg |
39782961 |
T |
|
| Q |
101 |
ctacggttataactcgacgggcctaatgtcagctcaatttcagtctcgtcgatgatctctagctcctcgtcatctgattctgcagtgtgctcctctgcag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
39782962 |
ctacggttataactcgacgggcctaatgtcagctcaatttcagtctcgtcgatgatctctagcccctcgtcatctgattctgcagtgtgctcctctgcag |
39783061 |
T |
|
| Q |
201 |
gcctttcaagatcaaatttgatttgag |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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|
| T |
39783062 |
gcctttcaagatcaaatttgatttgag |
39783088 |
T |
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