View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20920_high_21 (Length: 254)

Name: NF20920_high_21
Description: NF20920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20920_high_21
NF20920_high_21
[»] chr7 (2 HSPs)
chr7 (24-246)||(16067944-16068166)
chr7 (25-124)||(9692997-9693096)
[»] scaffold0010 (1 HSPs)
scaffold0010 (27-247)||(143111-143331)
[»] scaffold0408 (1 HSPs)
scaffold0408 (24-239)||(14990-15205)
[»] chr6 (6 HSPs)
chr6 (24-239)||(14746555-14746770)
chr6 (75-247)||(22395344-22395516)
chr6 (24-124)||(19545153-19545248)
chr6 (131-173)||(11796138-11796180)
chr6 (133-174)||(34487909-34487950)
chr6 (26-54)||(22395515-22395543)
[»] scaffold1043 (1 HSPs)
scaffold1043 (24-246)||(402-625)
[»] chr5 (6 HSPs)
chr5 (24-247)||(25791833-25792056)
chr5 (80-247)||(25756188-25756355)
chr5 (117-247)||(19020257-19020386)
chr5 (44-124)||(32948837-32948916)
chr5 (31-110)||(14137962-14138041)
chr5 (25-87)||(23909173-23909235)
[»] chr4 (11 HSPs)
chr4 (24-247)||(17419486-17419705)
chr4 (24-124)||(19727541-19727641)
chr4 (24-121)||(12230813-12230910)
chr4 (166-247)||(19727457-19727538)
chr4 (25-124)||(13559374-13559473)
chr4 (24-124)||(13268024-13268124)
chr4 (24-124)||(15870955-15871055)
chr4 (24-124)||(18554729-18554824)
chr4 (24-132)||(15888522-15888630)
chr4 (24-122)||(13235238-13235326)
chr4 (85-124)||(9886987-9887026)
[»] scaffold0061 (2 HSPs)
scaffold0061 (117-247)||(16550-16680)
scaffold0061 (117-247)||(25608-25738)
[»] chr2 (4 HSPs)
chr2 (24-124)||(29718105-29718205)
chr2 (56-124)||(18985282-18985350)
chr2 (37-124)||(26861220-26861307)
chr2 (168-247)||(22521725-22521805)
[»] scaffold0118 (1 HSPs)
scaffold0118 (24-123)||(11961-12060)
[»] chr3 (8 HSPs)
chr3 (24-123)||(21977110-21977209)
chr3 (24-123)||(21999541-21999640)
chr3 (25-124)||(10341062-10341161)
chr3 (24-123)||(22161736-22161835)
chr3 (44-124)||(10302744-10302824)
chr3 (24-124)||(19186787-19186887)
chr3 (24-124)||(16357828-16357927)
chr3 (28-132)||(16928561-16928663)
[»] chr8 (5 HSPs)
chr8 (24-123)||(10454081-10454180)
chr8 (24-78)||(17861384-17861438)
chr8 (28-124)||(15727763-15727862)
chr8 (27-70)||(1683238-1683281)
chr8 (27-66)||(1681200-1681239)
[»] scaffold0385 (1 HSPs)
scaffold0385 (24-124)||(16150-16250)
[»] scaffold0364 (1 HSPs)
scaffold0364 (44-124)||(14588-14668)
[»] scaffold0290 (1 HSPs)
scaffold0290 (29-124)||(11843-11938)
[»] chr1 (1 HSPs)
chr1 (24-124)||(21496568-21496667)
[»] scaffold0207 (1 HSPs)
scaffold0207 (44-118)||(752-827)
[»] scaffold0094 (1 HSPs)
scaffold0094 (24-124)||(2509-2603)
[»] scaffold0381 (1 HSPs)
scaffold0381 (85-124)||(11518-11557)


Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 24 - 246
Target Start/End: Complemental strand, 16068166 - 16067944
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16068166 cattttctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 16068067  T
Q  124 ctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaa 223  Q
    | | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16068066 cccccttacatctaatttatccccttgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaa 16067967  T
Q  224 taacatcaatgcttattcatctc 246  Q
    |||||||||||||||||||||||    
T  16067966 taacatcaatgcttattcatctc 16067944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 9693096 - 9692997
Alignment:
Q  25 attctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    |||||||||||||| ||| ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  9693096 attctctcatcaaacttctcatcataacatcaacaacttattaaaatttaagacaaccctcccatcatagattaagatactctaaagtgcaaagattctc 9692997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 143111 - 143331
Alignment:
Q  27 tctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctctc 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||| || |||||||| | |    
T  143111 tctctcatcaaaattcacatcataacagtaacaacattttaaaatttaagacaaccttcccatcatagattaagataccataaagtgaaaagattcaccc 143210  T
Q  127 tcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaataa 226  Q
     |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||   |||| ||||||| ||||||||||||||||||||||| |    
T  143211 ccttacatctaatctatccactcgttggcctaagatactccttaagagcgtcatctacaacgtaagctggaacaatcactacttgtcatctaaagaatga 143310  T
Q  227 catcaatgcttattcatctca 247  Q
    |||||||||||||||||||||    
T  143311 catcaatgcttattcatctca 143331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0408 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0408
Description:

Target: scaffold0408; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 14990 - 15205
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| || | |||||||||||||||||||| | ||||||||||||    
T  14990 cattctctcataaaaattcacatcataacagtaacaacattttaaaatttaagtcaaccttctcctcatagattaagataccctatagtgcaaagattct 15089  T
Q  124 ctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaa 223  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||  ||||||||||||||||||||||    
T  15090 cccccttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatcttcaacataagctggaaccatcactacttgtcatctaaagaa 15189  T
Q  224 taacatcaatgcttat 239  Q
    ||||||||||||||||    
T  15190 taacatcaatgcttat 15205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 14746555 - 14746770
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| || | |||||||||||||||||||| | ||||||||||||    
T  14746555 cattctctcataaaaattcacatcataacagtaacaacattttaaaatttaagtcaaccttctcctcatagattaagataccctatagtgcaaagattct 14746654  T
Q  124 ctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaa 223  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||  ||||||||||||||||||||||    
T  14746655 cccccttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatcttcaacataagctggaaccatcactacttgtcatctaaagaa 14746754  T
Q  224 taacatcaatgcttat 239  Q
    ||||||||||||||||    
T  14746755 taacatcaatgcttat 14746770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 75 - 247
Target Start/End: Complemental strand, 22395516 - 22395344
Alignment:
Q  75 agacaaccctcccgtcatagattaagataccctaaattgcaaagattctctctcttacatctaatctatcccctcgttggcctaagatactccttaagag 174  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||| |||| | |||||||| ||| ||||||||| ||||||||||||| |||||| |||    
T  22395516 agacaaccctcccatcatatattaagataccctaaagtgcaaagactctcccccttacatccaatttatcccctcattggcctaagatattccttatgag 22395417  T
Q  175 tgtcatctacataataagttggaacagtcactacttgtcatctaaagaataacatcaatgcttattcatctca 247  Q
     | ||||||||  ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22395416 cggcatctacaacataagctggaaccatcactacttgtcatctaaagaataacatcaatgcttattcacctca 22395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 19545248 - 19545153
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||     ||||||||||   |||||||||||||||||||||| ||||||||||||    
T  19545248 cattttctcatcaaaattcacattataacagcaacaacatattaaaa-----gacaaccctcatatcatagattaagataccctaaagtgcaaagattct 19545154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 11796180 - 11796138
Alignment:
Q  131 acatctaatctatcccctcgttggcctaagatactccttaaga 173  Q
    |||| |||||| ||||||||||||| |||||||||||||||||    
T  11796180 acatttaatctttcccctcgttggcataagatactccttaaga 11796138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 34487909 - 34487950
Alignment:
Q  133 atctaatctatcccctcgttggcctaagatactccttaagag 174  Q
    ||||||||| |||||||||||||||| ||||| |||||||||    
T  34487909 atctaatctctcccctcgttggcctatgatacaccttaagag 34487950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 22395543 - 22395515
Alignment:
Q  26 ttctctcatcaaaattcacatcataacag 54  Q
    |||||||||||||||||||||||||||||    
T  22395543 ttctctcatcaaaattcacatcataacag 22395515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1043 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 246
Target Start/End: Complemental strand, 625 - 402
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaa-tttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattc 122  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||| ||| |||||||||||||    
T  625 cattctctcataaaaattcatatcataacagtaacaacattttaaaaatttaagacaaccctctcatcatagattaagatactctacattgcaaagattc 526  T
Q  123 tctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaaga 222  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||   || ||||||||||||||||||    
T  525 tcccccttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacaacataagctggaatcatccctacttgtcatctaaaga 426  T
Q  223 ataacatcaatgcttattcatctc 246  Q
    ||||||||||||||||| ||||||    
T  425 ataacatcaatgcttatccatctc 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 8e-76; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 25791833 - 25792056
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||    
T  25791833 cattctctcatcaaagttcacatcataacagtaacaacattttaaaatttaagaaaaccctcctgtcatagattaagataccctaaagttcaaagattct 25791932  T
Q  124 ctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaa 223  Q
    | |||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||  ||||| | ||||   |||||||||||||||||||||    
T  25791933 ccctcttacatctaatttgtcccctcgttgacctaagatactccttaagagcgtcatctacagtataagctcgaaccaccactacttgtcatctaaagaa 25792032  T
Q  224 taacatcaatgcttattcatctca 247  Q
    ||| ||||||||||||| ||||||    
T  25792033 taaaatcaatgcttattaatctca 25792056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 25756355 - 25756188
Alignment:
Q  80 accctcccgtcatagattaagataccctaaattgcaaagattctctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtca 179  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||||| ||||    
T  25756355 accctcctgtcatagattaagataccctaaagtgcaaagattctccctcttacatctaatatgtcccctcgttgacctaagatactccttaagagcgtca 25756256  T
Q  180 tctacataataagttggaacagtcactacttgtcatctaaagaataacatcaatgcttattcatctca 247  Q
    ||||||  ||||| | ||||   |||||||||||||||||||||||| ||||||||||||||||||||    
T  25756255 tctacagtataagctcgaaccaccactacttgtcatctaaagaataaaatcaatgcttattcatctca 25756188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 19020257 - 19020386
Alignment:
Q  117 agattctctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactactt-gtcat 215  Q
    |||||||| | |||||||||||||| |||  || |||||||||||||||||||||||| | |||| |||    ||||||||||  ||||||||| |||||    
T  19020257 agattctcccccttacatctaatctctcc--tcattggcctaagatactccttaagagcgccatcaacaacccaagttggaaccatcactactttgtcat 19020354  T
Q  216 ctaaagaataacatcaatgcttattcatctca 247  Q
    ||||| ||||||||||||||||||||||||||    
T  19020355 ctaaataataacatcaatgcttattcatctca 19020386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 32948837 - 32948916
Alignment:
Q  44 catcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||| |||||| ||||| |||||||||||||    
T  32948837 catcataacagcaacaacatattaaaattaaagacaaccctcccatca-agatttagatactctaaagtgcaaagattctc 32948916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 14137962 - 14138041
Alignment:
Q  31 tcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaa 110  Q
    ||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||| ||| | | ||||||||||||||    
T  14137962 tcatcaaaattcacagcataacaacaacaacatattaagatttaagacaaccctcccatcaaataataagataccctaaa 14138041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 23909173 - 23909235
Alignment:
Q  25 attctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctccc 87  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||||    
T  23909173 attctctcatcaaaattctcatcataacaacaacaacttattaaaatttaagacaaccctccc 23909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 17419486 - 17419705
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  || || |||||||||||||||||||||| ||||||||||||    
T  17419486 cattctctcatcaaaattcacatcataatagtaacaacattttaaaatttaaaacaaatcttccttcatagattaagataccctaaagtgcaaagattct 17419585  T
Q  124 ctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcacta-cttgtcatctaaaga 222  Q
      | |||||     |||||||| |||||||||||||||||||||||||||||  ||||||||  ||||  ||||||  |||||| |||||||| ||||||    
T  17419586 tccccttac-----atctatccactcgttggcctaagatactccttaagagtaccatctacaacataaactggaaccatcactaccttgtcatataaaga 17419680  T
Q  223 ataacatcaatgcttattcatctca 247  Q
    |||||||||||||||||||||||||    
T  17419681 ataacatcaatgcttattcatctca 17419705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 19727641 - 19727541
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19727641 cattctctcgtcaaaattcacatcataacagtaacaacattttaaaatttaagacaaccctcccgtcatagattaagataccctaaagtgcaaagattct 19727542  T
Q  124 c 124  Q
    |    
T  19727541 c 19727541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 12230813 - 12230910
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagatt 121  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  12230813 cattctctcatcaaaattcacatcataatagcaacaacatattaaaatttaagacaaccctcccataatagattaagataccctaaagtgcaaagatt 12230910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 19727538 - 19727457
Alignment:
Q  166 ccttaagagtgtcatctacataataagttggaacagtcactacttgtcatctaaagaataacatcaatgcttattcatctca 247  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19727538 ccttaagagtgtcatctacaacataagttggaacagtcactacttgtcatctaaagaataacatcaatgcttattcatctca 19727457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 13559473 - 13559374
Alignment:
Q  25 attctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    |||||||||||||| ||| ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  13559473 attctctcatcaaacttctcatcataacatcaacaacttattaaaatttaagacaaccctcccatcatagattaagatactctaaagtgcaaagattctc 13559374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 13268024 - 13268124
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||| ||||||||||||||||||||  |||||  ||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||    
T  13268024 cattctctcgtcaaaattcacatcataacaacaacaatgtattaaaatttaagaaaaccctcccatcataaattaagataccctaaagtgcaaagattct 13268123  T
Q  124 c 124  Q
    |    
T  13268124 c 13268124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 15871055 - 15870955
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| |||||||||||| |||||||||||| || |    |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  15871055 cattcactcatcaaaatttacatcataacagaaaaagtgcattaaaatttaagacaaccctcccatcataaattaagataccctaaagtgcaaagattct 15870956  T
Q  124 c 124  Q
    |    
T  15870955 c 15870955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 18554824 - 18554729
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    |||| |||||||||||||||||||||||||| |||||||||||||     ||||||||||||   |||||||||||||||||||||| ||||||||||||    
T  18554824 cattttctcatcaaaattcacatcataacagcaacaacatattaa-----aagacaaccctcatatcatagattaagataccctaaagtgcaaagattct 18554730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 15888630 - 15888522
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| |||||||| ||| |||||||||||| || |    |||||||||||||||||||||||| ||||| ||| ||||| |||||| ||||||||||||    
T  15888630 cattcactcatcaatatttacatcataacagcaaaagtgcattaaaatttaagacaaccctcccatcataaatttagatatcctaaagtgcaaagattct 15888531  T
Q  124 ctctcttac 132  Q
    | |||||||    
T  15888530 ccctcttac 15888522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 13235238 - 13235326
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattc 122  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||          |||||| |||||||| ||||| |||||||||| |||||||||||    
T  13235238 cattctctcgtcaaaattcacatcataacactaacaacatattaa----------aacccttccgtcataaattaatataccctaaagtgcaaagattc 13235326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 9886987 - 9887026
Alignment:
Q  85 cccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  9886987 cccgtcatatattaagataccctaaagtgcaaagattctc 9887026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 16680 - 16550
Alignment:
Q  117 agattctctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatc 216  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||   |||| ||||||| |||||||||||||||    
T  16680 agattctcccccttacatctaatctatccactcgttggcctaagatactccttaagagcgtcatctacaacgtaagctggaacaatcactacttgtcatc 16581  T
Q  217 taaagaataacatcaatgcttattcatctca 247  Q
    |||||||||||||||||||||||||||||||    
T  16580 taaagaataacatcaatgcttattcatctca 16550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 25738 - 25608
Alignment:
Q  117 agattctctctcttacatctaatctatcccctcgttggcctaagatactccttaagagtgtcatctacataataagttggaacagtcactacttgtcatc 216  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||   |||| ||||||| |||||||||||||||    
T  25738 agattctcccccttacatctaatctatccactcgttggcctaagatactccttaagagcgtcatctacaacgtaagctggaacaatcactacttgtcatc 25639  T
Q  217 taaagaataacatcaatgcttattcatctca 247  Q
    |||||||||||||||||||||||||||||||    
T  25638 taaagaataacatcaatgcttattcatctca 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 29718205 - 29718105
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||||| ||||| |||||| |||||    
T  29718205 cattctctcatcaaaattcacatcataacaacaacaacatattaaaatttaagacaacccttccatcatagattaagatactctaaagtgcaaatattct 29718106  T
Q  124 c 124  Q
    |    
T  29718105 c 29718105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 18985350 - 18985282
Alignment:
Q  56 aacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    |||||||||||||||||||| ||||||||||  |||||||||| ||||||||||  |||||||||||||    
T  18985350 aacaacatattaaaatttaatacaaccctcctatcatagattacgataccctaatgtgcaaagattctc 18985282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 26861307 - 26861220
Alignment:
Q  37 aaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||| ||| |||||||| || || |||||||||||||| |||||||| || |||| ||||||||||||||||| |||||||| ||||    
T  26861307 aaattaacaccataacagcaataatatattaaaatttaatacaacccttccatcatggattaagataccctaaagtgcaaagaatctc 26861220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 22521725 - 22521805
Alignment:
Q  168 ttaagagtgtcatctacataataagttggaacagtcactactt-gtcatctaaagaataacatcaatgcttattcatctca 247  Q
    ||||||| | ||||||||  | |||||| |||  ||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  22521725 ttaagagcgccatctacaacacaagttgtaaccatcactactttgtcatctaaaaaataacatcaatggttattcatctca 22521805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 11961 - 12060
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||| ||||| |||||||||||||||| |||||| |||||    
T  11961 cattctctcatcaaaattcacatcataacagcaacaatgaattaaaatttaagacaaccctcccatcataaattaagataccctaaagtgcaaatattct 12060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 21977110 - 21977209
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||    
T  21977110 cattcactcatcaaaattcacatcataacagcaacaatgtattaaaatttaagacaacccttccatcataaattaagataccctaaagtgcaaagattct 21977209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 21999541 - 21999640
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||    
T  21999541 cattcactcatcaaaattcacatcataacagcaacaatgtattaaaatttaagacaacccttccatcataaattaagataccctaaagtgcaaagattct 21999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 10341062 - 10341161
Alignment:
Q  25 attctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||| ||||||  ||||||||||||||||||||| |||||| ||||||    
T  10341062 attctctcatcaaaattctcatcataacatcaacaacttattaaaatttaagacaatcctcccaccatagattaagataccctaaagtgcaaatattctc 10341161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 22161736 - 22161835
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||    
T  22161736 cattcactcatcaaaattcacatcataacagcaacaatgtattcaaatttaagacaacccttccatcataaattaagataccctaaagtgcaaagattct 22161835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 10302744 - 10302824
Alignment:
Q  44 catcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  10302744 catcataacatcaacaacttattaaaatttaagacaaccctcccatcatagattaagataccctaaagtgcaaagattctc 10302824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 19186787 - 19186887
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| || |||||||||||||||||||||| |||||  |||||||||||||||| |||| ||| ||||| |||||||||||||||| ||||||||||||    
T  19186787 cattcactgatcaaaattcacatcataacagcaacaatgtattaaaatttaagacgacccacccatcataaattaagataccctaaagtgcaaagattct 19186886  T
Q  124 c 124  Q
    |    
T  19186887 c 19186887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 16357927 - 16357828
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| |||||||| ||| |||||||||||| || |    ||||||||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||    
T  16357927 cattcactcatcaacatttacatcataacagcaaaagtgcattaaaatttaagacaacc-tcccatcataaattaagataccctaaagtgcaaagattct 16357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 16928561 - 16928663
Alignment:
Q  28 ctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccc-tcccgtcatagattaagataccctaaattgcaaagattctctc 126  Q
    ||||| || ||||||||| |||||||   ||||||||||||||||||||||||||| | || ||||||||||||||||  |||| || ||| ||||||||    
T  16928561 ctctcgtccaaattcacaccataaca---acaacatattaaaatttaagacaaccctttccatcatagattaagatactttaaagtgaaaatattctctc 16928657  T
Q  127 tcttac 132  Q
     |||||    
T  16928658 ccttac 16928663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 10454180 - 10454081
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||| || |||||||| ||| |||||||||||||||||||||| | ||||||||||    
T  10454180 cattctctcatcaaaattcacaccataacagcaaaaacatattaaaatataggacaacccacccatcatagattaagataccctaaagttcaaagattct 10454081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 17861438 - 17861384
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagac 78  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  17861438 cattctctcatcaaaattcacgtcataacagtaacaacattttaaaatttaagac 17861384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 15727763 - 15727862
Alignment:
Q  28 ctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccc------tcccgtcatagattaagataccctaaattgcaaagatt 121  Q
    ||||||| |||||||||||||||||   |||||||||||||||| ||| |||||||      |||| |||||||||||||||||||||| || || ||||    
T  15727763 ctctcataaaaattcacatcataac---aacaacatattaaaatctaatacaaccctctcaatcccatcatagattaagataccctaaagtgtaaggatt 15727859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 1683238 - 1683281
Alignment:
Q  27 tctctcatcaaaattcacatcataacagtaacaacatattaaaa 70  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  1683238 tctctcatcaaaattcacatcataaccgcaacaacatattaaaa 1683281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 1681200 - 1681239
Alignment:
Q  27 tctctcatcaaaattcacatcataacagtaacaacatatt 66  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  1681200 tctctcatcaaaattcacatcataaccgcaacaacatatt 1681239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 16150 - 16250
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||| |||||||||||||||||||||| || |||||  |||||||||||||||| |||||||| ||||| |||||||||||||||| | ||||||||||    
T  16150 cattcactcatcaaaattcacatcataaaagcaacaatgtattaaaatttaagacgaccctcccatcataaattaagataccctaaagtacaaagattct 16249  T
Q  124 c 124  Q
    |    
T  16250 c 16250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 14588 - 14668
Alignment:
Q  44 catcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  14588 catcataacagcaacaacatattgaaattaaagacaaccctcccatcatagattaagataccctaaagtgcaaagattctc 14668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 11938 - 11843
Alignment:
Q  29 tctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||  ||||| |||| || |||||||| |||||||||||||    
T  11938 tctcatcaaaatttacatcataacagcaacaacatattaaaatttaatacaaccctcctatcataaattacgacaccctaaagtgcaaagattctc 11843  T

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Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 21496568 - 21496667
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    ||||||||||| || ||||| ||||||  || ||||||||||| |||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||    
T  21496568 cattctctcataaatattcatatcatattagaaacaacatatttaaatttaagataaccctccc-acatagattaagataccctaaagtgcaaagattct 21496666  T

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Target: scaffold0207 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 827 - 752
Alignment:
Q  44 catcataacagtaacaacata-ttaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaag 118  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||  |||||||||||||||||||||| |||||||    
T  827 catcataacagcaacaacataattaaaattaaagacaaccctccaatcatagattaagataccctaaagtgcaaag 752  T

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Target: scaffold0094 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 2603 - 2509
Alignment:
Q  24 cattctctcatcaaaattcacatcataacagtaacaacatattaaaatttaagacaaccctcccgtcatagattaagataccctaaattgcaaagattct 123  Q
    |||| |||| ||||||||||||||||| ||| ||||||||||||||||     | |||||||   |||||||||||||||||||||| ||||||||||||    
T  2603 cattttctcgtcaaaattcacatcataccagcaacaacatattaaaat-----ataaccctcatatcatagattaagataccctaaa-tgcaaagattct 2510  T

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Target: scaffold0381 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 11557 - 11518
Alignment:
Q  85 cccgtcatagattaagataccctaaattgcaaagattctc 124  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  11557 cccgtcatatattaagataccctaaagtgcaaagattctc 11518  T

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