View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20920_low_2 (Length: 630)
Name: NF20920_low_2
Description: NF20920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20920_low_2 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 559; Significance: 0; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 20 - 620
Target Start/End: Original strand, 27869843 - 27870453
Alignment:
| Q |
20 |
atccattatggatggtctaactctttaccttttcctagactct---gtcttttcttaatgaaaattaaccctttgcctcgttaacacggaagatttgctc |
116 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27869843 |
atccattatggatagtctaactctttaccttttcctagactcttttgtcttttcttaatgaaaattaaccctttgcctcgttaacacggaagatttgctc |
27869942 |
T |
 |
| Q |
117 |
ttttatttagtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaaaaactagctagggtacgaatttcatagatgtatagg |
216 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27869943 |
ttttatttagtgtacataatttgcgaaatctaaactccgtaacttgctagaatacggcgtcaaaaaactagctagagtacgaatttcatagatgtatagg |
27870042 |
T |
 |
| Q |
217 |
tttaggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaacaaa |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27870043 |
tttaggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaacaaa |
27870142 |
T |
 |
| Q |
317 |
aat-------aataaataatctatgcatgtaagtggtagacaatcaatattacactattactcctttaattaagtgattgttttcaagagattaataaac |
409 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27870143 |
aataataaataataaataatctatgcatgtaagtggtagacaatcaatattacactattactcctttaattaagtgattgttttcaagagattaataaac |
27870242 |
T |
 |
| Q |
410 |
tttactaaatgacaacaaattgtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcacttaatttatcttttaatcaaattttag |
509 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27870243 |
tttactaaatgacaacaaattgtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcacttaatttatcttttaatcaaattttag |
27870342 |
T |
 |
| Q |
510 |
attattaaaatttcattatcatagaaagtggagggttttaacacaaaaaacactttcctccctctgctttatttataagaaagtcatttttcacttttta |
609 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27870343 |
attattaaaatttcattatcatagaaagtggagggttttaacacaaaaaacactttcctccctctgctttatttataagaaagtcatttttcacttttta |
27870442 |
T |
 |
| Q |
610 |
actgtcctttg |
620 |
Q |
| |
|
||||||||||| |
|
|
| T |
27870443 |
actgtcctttg |
27870453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 23 - 398
Target Start/End: Original strand, 27879160 - 27879540
Alignment:
| Q |
23 |
cattatggatggtctaactctttaccttttcctagactct--gtcttttcttaatgaaaattaaccctttgcct-cgttaacacggaagatttgctcttt |
119 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |
|
|
| T |
27879160 |
cattgtggatggtctaactctttaccttttactagactctttgtcttttcttaatgaaaattaaccctttgccttctttaacacggaagatttgctctat |
27879259 |
T |
 |
| Q |
120 |
tatttagtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaa-aaactagctagggtacgaatttcatagatgtataggtt |
218 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||| |||| |||||| |||||||||| ||||||||||||| | |
|
|
| T |
27879260 |
tatttagtgtacataatatgcgaaatctaaactccctaacttgctagaatacggcgtaaaataaaccagctagagtacgaatttgatagatgtataggat |
27879359 |
T |
 |
| Q |
219 |
taggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaacaaaaa |
318 |
Q |
| |
|
| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27879360 |
tggttactatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacacacaaaaa |
27879459 |
T |
 |
| Q |
319 |
taataaataatctatgcatgtaagtggtagacaatcaatattacactattact-cctttaattaagtgattgttttcaaga |
398 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27879460 |
taaaaaataatctatgcatgtaagtgatagacaatcaatattacactattactccctttaattaagtgattgttttcaaga |
27879540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 23 - 398
Target Start/End: Original strand, 28019341 - 28019721
Alignment:
| Q |
23 |
cattatggatggtctaactctttaccttttcctagactct--gtcttttcttaatgaaaattaaccctttgcct-cgttaacacggaagatttgctcttt |
119 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |
|
|
| T |
28019341 |
cattgtggatggtctaactctttaccttttactagactctttgtcttttcttaatgaaaattaaccctttgccttctttaacacggaagatttgctctat |
28019440 |
T |
 |
| Q |
120 |
tatttagtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaa-aaactagctagggtacgaatttcatagatgtataggtt |
218 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||| |||| |||||| |||||||||| ||||||||||||| | |
|
|
| T |
28019441 |
tatttagtgtacataatatgcgaaatctaaactccctaacttgctagaatacggcgtaaaataaaccagctagagtacgaatttgatagatgtataggat |
28019540 |
T |
 |
| Q |
219 |
taggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaacaaaaa |
318 |
Q |
| |
|
| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28019541 |
tggttactatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacacacaaaaa |
28019640 |
T |
 |
| Q |
319 |
taataaataatctatgcatgtaagtggtagacaatcaatattacactattact-cctttaattaagtgattgttttcaaga |
398 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28019641 |
taaaaaataatctatgcatgtaagtgatagacaatcaatattacactattactccctttaattaagtgattgttttcaaga |
28019721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 23 - 417
Target Start/End: Original strand, 27917013 - 27917418
Alignment:
| Q |
23 |
cattatggatggtctaactctttaccttttcctagactct--gtcttttcttaatgaaaattaaccctttgcct-cgttaacacggaagatttgctcttt |
119 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |
|
|
| T |
27917013 |
cattgtggatggtctaactctttaccttttactagactctttgtcttttcttaatgaaaattaaccctttgccttctttaacacggaagatttgctctat |
27917112 |
T |
 |
| Q |
120 |
tatttagtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaaaaactagctagggtacgaatttcatagatgtataggttt |
219 |
Q |
| |
|
||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||| || |||| |||||| |||||||||| ||||||||||||| || |
|
|
| T |
27917113 |
tatttagtgtacataatatgcaaaatctaaactccctaacttgctagaatacggcgaaaataaaccagctagagtacgaatttgatagatgtataggatt |
27917212 |
T |
 |
| Q |
220 |
aggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaac------ |
313 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
27917213 |
ggttactatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtatggacgaattaatcaacacacaaaaat |
27917312 |
T |
 |
| Q |
314 |
-aaaaataataaataatctatgcatgtaagtggtagacaatcaatattacactattact-cctttaattaagtgattgttttcaagagattaataaactt |
411 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27917313 |
aaaaaataaaaaataatctatgcatgtaagtgatagacaatcaatattacactattactccctttaattaagtgattgttttcaagagattaataaactt |
27917412 |
T |
 |
| Q |
412 |
tactaa |
417 |
Q |
| |
|
|||||| |
|
|
| T |
27917413 |
tactaa |
27917418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 23 - 417
Target Start/End: Original strand, 27963432 - 27963837
Alignment:
| Q |
23 |
cattatggatggtctaactctttaccttttcctagactct--gtcttttcttaatgaaaattaaccctttgcct-cgttaacacggaagatttgctcttt |
119 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |
|
|
| T |
27963432 |
cattgtggatggtctaactctttaccttttactagactctttgtcttttcttaatgaaaattaaccctttgccttctttaacacggaagatttgctctat |
27963531 |
T |
 |
| Q |
120 |
tatttagtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaaaaactagctagggtacgaatttcatagatgtataggttt |
219 |
Q |
| |
|
||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||| || |||| |||||| |||||||||| ||||||||||||| || |
|
|
| T |
27963532 |
tatttagtgtacataatatgcaaaatctaaactccctaacttgctagaatacggcgaaaataaaccagctagagtacgaatttgatagatgtataggatt |
27963631 |
T |
 |
| Q |
220 |
aggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaac------ |
313 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
27963632 |
ggttactatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtatggacgaattaatcaacacacaaaaat |
27963731 |
T |
 |
| Q |
314 |
-aaaaataataaataatctatgcatgtaagtggtagacaatcaatattacactattact-cctttaattaagtgattgttttcaagagattaataaactt |
411 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27963732 |
aaaaaataaaaaataatctatgcatgtaagtgatagacaatcaatattacactattactccctttaattaagtgattgttttcaagagattaataaactt |
27963831 |
T |
 |
| Q |
412 |
tactaa |
417 |
Q |
| |
|
|||||| |
|
|
| T |
27963832 |
tactaa |
27963837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 25 - 396
Target Start/End: Original strand, 27975451 - 27975838
Alignment:
| Q |
25 |
ttatggatggtctaactctttaccttttcctagactct--gtcttttcttaatgaaaattaaccctttgcct-cgttaacacggaagatttgctctttta |
121 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
27975451 |
ttatagatggtctaactctttaccttttcctaaactctttgtcttttcttaatgaaaattaaccctttgccttctttaacacggaagatttgctctttta |
27975550 |
T |
 |
| Q |
122 |
ttt----agtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaa-aaactagctagggtacgaatttcatagatgtatagg |
216 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27975551 |
ttttattagtgtacataatttgcgaaatctaaactccctaacttgctagaatacggcgtaaaataaactagctagagtacgaatttcatagatgtatagg |
27975650 |
T |
 |
| Q |
217 |
tttaggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaac--- |
313 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| || |
|
|
| T |
27975651 |
tttagttattatttacctaaattaaaagaaaataacatcttcaaaaacatatcctataattttttctctatatgtttggacgaattaatcaacacacaaa |
27975750 |
T |
 |
| Q |
314 |
----aaaaataataaataatctatgcatgtaagtggtagacaatcaatattacactattact-cctttaattaagtgattgttttcaa |
396 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27975751 |
aataaaaaataaaaaataatatatgcatgtaagtggtagacaatcaatattacactattactccctttaattaagtgattgttttcaa |
27975838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 25 - 396
Target Start/End: Original strand, 28032720 - 28033107
Alignment:
| Q |
25 |
ttatggatggtctaactctttaccttttcctagactct--gtcttttcttaatgaaaattaaccctttgcct-cgttaacacggaagatttgctctttta |
121 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
28032720 |
ttatagatggtctaactctttaccttttcctaaactctttgtcttttcttaatgaaaattaaccctttgccttctttaacacggaagatttgctctttta |
28032819 |
T |
 |
| Q |
122 |
ttt----agtgtacataatttgcgaaatataaactccgtaacttgctagaatacggcgtcaaa-aaactagctagggtacgaatttcatagatgtatagg |
216 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28032820 |
ttttattagtgtacataatttgcgaaatctaaactccctaacttgctagaatacggcgtaaaataaactagctagagtacgaatttcatagatgtatagg |
28032919 |
T |
 |
| Q |
217 |
tttaggtattatttacctaaattaaaagaaaataacatcttcaaaacaatatcctataattttttctctatctgtgtggacgaattaatcaacaaac--- |
313 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| || |
|
|
| T |
28032920 |
tttagttattatttacctaaattaaaagaaaataacatcttcaaaaacatatcctataattttttctctatatgtttggacgaattaatcaacacacaaa |
28033019 |
T |
 |
| Q |
314 |
----aaaaataataaataatctatgcatgtaagtggtagacaatcaatattacactattact-cctttaattaagtgattgttttcaa |
396 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28033020 |
aataaaaaataaaaaataatatatgcatgtaagtggtagacaatcaatattacactattactccctttaattaagtgattgttttcaa |
28033107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 384 - 620
Target Start/End: Original strand, 27976017 - 27976251
Alignment:
| Q |
384 |
tgattgttttcaagagattaataaactttactaaatgacaacaaatt-gtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcac |
482 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27976017 |
tgattgttttcaagagattaataaactttactaaatgacagcaaatttgtttggagttgcttgtgtttgaatta-----tgaaacaattcttgatctcac |
27976111 |
T |
 |
| Q |
483 |
ttaatttatcttttaatcaaattttagattattaaaatttcattatcatagaaagtggagggttttaacacaaaaaacactttcctccctct-gctttat |
581 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
27976112 |
ttaatttatcttttaatcaaatttcagattactaagattttattatcatagaaagtggagggttttaacacaaaaaacactttactccctctatctttat |
27976211 |
T |
 |
| Q |
582 |
ttataagaaagtcatttttca-ctttttaactgtcctttg |
620 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
27976212 |
tgataagaaagtcatttttcatttttttaactgtcttttg |
27976251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 384 - 620
Target Start/End: Original strand, 28033286 - 28033520
Alignment:
| Q |
384 |
tgattgttttcaagagattaataaactttactaaatgacaacaaatt-gtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcac |
482 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28033286 |
tgattgttttcaagagattaataaactttactaaatgacagcaaatttgtttggagttgcttgtgtttgaatta-----tgaaacaattcttgatctcac |
28033380 |
T |
 |
| Q |
483 |
ttaatttatcttttaatcaaattttagattattaaaatttcattatcatagaaagtggagggttttaacacaaaaaacactttcctccctct-gctttat |
581 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
28033381 |
ttaatttatcttttaatcaaatttcagattactaagattttattatcatagaaagtggagggttttaacacaaaaaacactttactccctctatctttat |
28033480 |
T |
 |
| Q |
582 |
ttataagaaagtcatttttca-ctttttaactgtcctttg |
620 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
28033481 |
tgataagaaagtcatttttcatttttttaactgtcttttg |
28033520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 415 - 620
Target Start/End: Original strand, 27964235 - 27964444
Alignment:
| Q |
415 |
taaatgacaacaaatt-gtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcacttaatttatcttttaatcaaattttagatta |
513 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27964235 |
taaatgacagcaaatttgtttggagttgcttgtgtttgaat-catgagtgaaacaattttttatctcacttaatttatcttttaatcaaatttcagatta |
27964333 |
T |
 |
| Q |
514 |
ttaaaatttcattatcatagaaagtggagggttttaacac--aaaaaacac-tttcctccctctg-ctttatttataagaaagtcatttttcacttttta |
609 |
Q |
| |
|
||| |||||||| ||||||||||| |||||||||||||| ||||||||| ||| |||| |||| |||||||||||||||| | ||||||||||||||| |
|
|
| T |
27964334 |
ctaagatttcattgtcatagaaagtagagggttttaacaccaaaaaaacacttttactccttctgtctttatttataagaaaattatttttcacttttta |
27964433 |
T |
 |
| Q |
610 |
actgtcctttg |
620 |
Q |
| |
|
| ||||||||| |
|
|
| T |
27964434 |
attgtcctttg |
27964444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 429 - 620
Target Start/End: Original strand, 27881608 - 27881802
Alignment:
| Q |
429 |
ttgtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcacttaatttatcttttaatcaaattttagattattaaaatttcattat |
528 |
Q |
| |
|
|||||| ||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
27881608 |
ttgtttagagttgcttgtgtttgaat-catgagtgaaacaattttttatctcacttaatttatcttttaatcaaatttcagattactaagatttcattat |
27881706 |
T |
 |
| Q |
529 |
catagaaagtggagggttttaacac--aaaaaacac-tttcctccctctg-ctttatttataagaaagtcatttttcactttttaactgtcctttg |
620 |
Q |
| |
|
|||||||||| |||||||||||||| | ||||||| ||| |||| |||| |||||||||||||||| | |||||||||||||||| ||||||||| |
|
|
| T |
27881707 |
catagaaagtagagggttttaacaccaacaaaacacttttactccttctgtctttatttataagaaaattatttttcactttttaattgtcctttg |
27881802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 429 - 620
Target Start/End: Original strand, 28021789 - 28021983
Alignment:
| Q |
429 |
ttgtttggagttgcttgtgtttgaattcgtgagtgaaacaattcttgatctcacttaatttatcttttaatcaaattttagattattaaaatttcattat |
528 |
Q |
| |
|
|||||| ||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
28021789 |
ttgtttagagttgcttgtgtttgaat-catgagtgaaacaattttttatctcacttaatttatcttttaatcaaatttcagattactaagatttcattat |
28021887 |
T |
 |
| Q |
529 |
catagaaagtggagggttttaacac--aaaaaacac-tttcctccctctg-ctttatttataagaaagtcatttttcactttttaactgtcctttg |
620 |
Q |
| |
|
|||||||||| |||||||||||||| | ||||||| ||| |||| |||| |||||||||||||||| | |||||||||||||||| ||||||||| |
|
|
| T |
28021888 |
catagaaagtagagggttttaacaccaacaaaacacttttactccttctgtctttatttataagaaaattatttttcactttttaattgtcctttg |
28021983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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