View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20921_high_5 (Length: 285)

Name: NF20921_high_5
Description: NF20921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20921_high_5
NF20921_high_5
[»] chr8 (49 HSPs)
chr8 (1-270)||(12643684-12643953)
chr8 (1-61)||(1651948-1652008)
chr8 (1-61)||(1740324-1740384)
chr8 (1-66)||(15741604-15741669)
chr8 (1-66)||(24652836-24652901)
chr8 (1-61)||(1432144-1432204)
chr8 (1-61)||(11174011-11174071)
chr8 (1-61)||(11920149-11920209)
chr8 (1-61)||(15048412-15048472)
chr8 (1-61)||(15048776-15048836)
chr8 (1-61)||(15871998-15872058)
chr8 (1-61)||(22763310-22763370)
chr8 (1-61)||(33819798-33819858)
chr8 (1-61)||(37569327-37569387)
chr8 (1-61)||(40659996-40660056)
chr8 (1-61)||(40660263-40660323)
chr8 (1-61)||(45276610-45276670)
chr8 (1-66)||(24666050-24666115)
chr8 (1-66)||(34470916-34470981)
chr8 (1-66)||(45077575-45077640)
chr8 (1-61)||(1646514-1646574)
chr8 (1-61)||(1646883-1646943)
chr8 (1-61)||(1739961-1740021)
chr8 (1-61)||(5435277-5435337)
chr8 (1-61)||(7535210-7535270)
chr8 (1-61)||(45077234-45077294)
chr8 (1-61)||(45276973-45277033)
chr8 (1-66)||(15740626-15740691)
chr8 (1-66)||(15871634-15871699)
chr8 (1-50)||(18476068-18476117)
chr8 (12-61)||(27669440-27669489)
chr8 (1-61)||(5152911-5152971)
chr8 (1-61)||(5434913-5434973)
chr8 (1-61)||(27473085-27473145)
chr8 (1-61)||(27473448-27473508)
chr8 (1-65)||(29770372-29770436)
chr8 (1-61)||(33296061-33296121)
chr8 (1-61)||(38588600-38588660)
chr8 (1-61)||(38588964-38589024)
chr8 (1-59)||(11707763-11707821)
chr8 (7-61)||(27669797-27669851)
chr8 (1-50)||(14897392-14897441)
chr8 (1-50)||(33098966-33099015)
chr8 (1-50)||(45123611-45123660)
chr8 (1-61)||(1869946-1870006)
chr8 (1-61)||(7949425-7949485)
chr8 (1-61)||(22762526-22762586)
chr8 (1-61)||(33295749-33295809)
chr8 (1-61)||(44594978-44595038)
[»] chr3 (83 HSPs)
chr3 (66-217)||(28869815-28869966)
chr3 (1-66)||(13866033-13866098)
chr3 (1-66)||(44317587-44317652)
chr3 (1-66)||(49528162-49528227)
chr3 (1-61)||(10506325-10506385)
chr3 (1-61)||(18464833-18464893)
chr3 (1-61)||(27801502-27801562)
chr3 (1-61)||(39241371-39241431)
chr3 (1-61)||(54108279-54108339)
chr3 (1-66)||(1994182-1994247)
chr3 (1-66)||(1999341-1999406)
chr3 (1-66)||(47303388-47303453)
chr3 (1-61)||(4757870-4757930)
chr3 (1-61)||(5900800-5900860)
chr3 (1-61)||(8474223-8474283)
chr3 (1-61)||(12791553-12791613)
chr3 (1-61)||(21569122-21569182)
chr3 (1-61)||(22201993-22202053)
chr3 (1-61)||(27801866-27801926)
chr3 (1-61)||(39664197-39664257)
chr3 (1-61)||(42592161-42592221)
chr3 (1-61)||(43844412-43844472)
chr3 (1-61)||(51509132-51509192)
chr3 (1-61)||(54107915-54107975)
chr3 (2-61)||(46152629-46152688)
chr3 (1-66)||(4757507-4757572)
chr3 (1-66)||(4773614-4773679)
chr3 (1-66)||(5900436-5900501)
chr3 (1-66)||(30681789-30681854)
chr3 (1-61)||(1994545-1994605)
chr3 (1-61)||(11256480-11256540)
chr3 (1-61)||(15790692-15790752)
chr3 (1-61)||(15986611-15986671)
chr3 (1-61)||(16931983-16932043)
chr3 (1-61)||(18464469-18464529)
chr3 (1-61)||(22201629-22201689)
chr3 (1-61)||(24428580-24428640)
chr3 (1-61)||(24428944-24429004)
chr3 (1-61)||(26318195-26318255)
chr3 (1-61)||(28985522-28985582)
chr3 (1-61)||(28986518-28986578)
chr3 (1-61)||(32633442-32633502)
chr3 (1-61)||(42591797-42591857)
chr3 (1-61)||(44893753-44893813)
chr3 (1-61)||(44894117-44894177)
chr3 (1-61)||(47669272-47669332)
chr3 (1-61)||(53716307-53716367)
chr3 (7-61)||(8473865-8473919)
chr3 (12-66)||(43839984-43840038)
chr3 (1-66)||(13866972-13867037)
chr3 (1-66)||(20963597-20963662)
chr3 (1-66)||(49529128-49529193)
chr3 (1-61)||(4773256-4773316)
chr3 (1-61)||(7163463-7163523)
chr3 (1-61)||(10505961-10506021)
chr3 (1-61)||(12203928-12203988)
chr3 (1-61)||(16931619-16931679)
chr3 (1-61)||(21568759-21568819)
chr3 (1-61)||(21969642-21969702)
chr3 (1-61)||(21992078-21992138)
chr3 (1-61)||(26318559-26318619)
chr3 (1-61)||(29818190-29818250)
chr3 (1-61)||(39664561-39664621)
chr3 (1-61)||(45306845-45306905)
chr3 (1-61)||(45307069-45307129)
chr3 (1-61)||(47669636-47669696)
chr3 (1-61)||(53716670-53716730)
chr3 (1-61)||(54752176-54752236)
chr3 (1-61)||(54752540-54752600)
chr3 (7-61)||(19883617-19883671)
chr3 (1-50)||(966993-967042)
chr3 (1-50)||(6098977-6099026)
chr3 (1-61)||(7681500-7681561)
chr3 (1-50)||(11256116-11256165)
chr3 (1-50)||(13355723-13355772)
chr3 (1-50)||(30681042-30681091)
chr3 (1-66)||(40639425-40639490)
chr3 (7-55)||(12203570-12203618)
chr3 (1-61)||(15986248-15986308)
chr3 (1-61)||(22151858-22151918)
chr3 (1-61)||(29818554-29818614)
chr3 (2-50)||(32309601-32309649)
chr3 (1-61)||(44316640-44316700)
[»] chr6 (56 HSPs)
chr6 (1-66)||(17244677-17244742)
chr6 (1-61)||(32993392-32993452)
chr6 (1-66)||(6228743-6228808)
chr6 (1-66)||(15932928-15932993)
chr6 (1-66)||(21856568-21856633)
chr6 (1-61)||(2517015-2517075)
chr6 (1-61)||(2517379-2517439)
chr6 (1-61)||(3423183-3423243)
chr6 (1-61)||(6137754-6137814)
chr6 (1-61)||(6532205-6532265)
chr6 (1-61)||(7438817-7438877)
chr6 (1-61)||(9046463-9046523)
chr6 (1-61)||(15932743-15932803)
chr6 (1-61)||(18053330-18053390)
chr6 (1-61)||(25176676-25176736)
chr6 (1-61)||(32753550-32753610)
chr6 (1-61)||(34517285-34517345)
chr6 (1-61)||(34518069-34518129)
chr6 (1-61)||(34891021-34891081)
chr6 (1-66)||(21856927-21856992)
chr6 (4-61)||(25180225-25180282)
chr6 (1-66)||(34890657-34890722)
chr6 (1-61)||(978428-978488)
chr6 (1-61)||(5311203-5311263)
chr6 (1-61)||(5938190-5938250)
chr6 (1-61)||(7271006-7271066)
chr6 (1-61)||(9046099-9046159)
chr6 (1-61)||(18052969-18053029)
chr6 (1-61)||(24744341-24744401)
chr6 (1-61)||(31237759-31237819)
chr6 (1-61)||(31247129-31247189)
chr6 (1-61)||(31247493-31247553)
chr6 (1-61)||(32753190-32753250)
chr6 (1-61)||(34994393-34994453)
chr6 (1-61)||(35167503-35167563)
chr6 (1-60)||(14276412-14276471)
chr6 (1-60)||(35167833-35167892)
chr6 (7-61)||(7269970-7270024)
chr6 (1-59)||(7270332-7270390)
chr6 (1-50)||(6137392-6137441)
chr6 (1-61)||(5937826-5937886)
chr6 (1-61)||(15286358-15286418)
chr6 (1-61)||(24744698-24744757)
chr6 (1-61)||(26600370-26600430)
chr6 (1-61)||(29261328-29261388)
chr6 (1-61)||(31238124-31238183)
chr6 (1-66)||(6229695-6229759)
chr6 (1-66)||(27829337-27829402)
chr6 (4-61)||(29260547-29260604)
chr6 (1-61)||(5639550-5639610)
chr6 (1-61)||(6235934-6235994)
chr6 (1-61)||(6236298-6236358)
chr6 (1-61)||(21540354-21540414)
chr6 (1-61)||(26600724-26600784)
chr6 (1-61)||(26957338-26957398)
chr6 (1-61)||(34994757-34994817)
[»] chr5 (33 HSPs)
chr5 (1-66)||(19184610-19184675)
chr5 (1-61)||(2182956-2183016)
chr5 (1-61)||(25183030-25183090)
chr5 (1-61)||(38958737-38958797)
chr5 (1-61)||(38959100-38959160)
chr5 (1-61)||(1140142-1140202)
chr5 (1-61)||(9989336-9989396)
chr5 (1-61)||(24040098-24040158)
chr5 (1-61)||(27186250-27186310)
chr5 (1-61)||(36440577-36440637)
chr5 (1-61)||(39325425-39325485)
chr5 (1-60)||(34264730-34264789)
chr5 (1-66)||(27185887-27185952)
chr5 (1-61)||(11315971-11316031)
chr5 (1-61)||(16860316-16860376)
chr5 (1-61)||(24040464-24040524)
chr5 (1-61)||(35569788-35569848)
chr5 (1-61)||(39325732-39325792)
chr5 (1-66)||(37424637-37424701)
chr5 (1-57)||(19128434-19128490)
chr5 (1-61)||(32288091-32288151)
chr5 (1-61)||(37424275-37424335)
chr5 (1-50)||(6157493-6157542)
chr5 (16-61)||(11316331-11316376)
chr5 (1-66)||(19185556-19185621)
chr5 (1-50)||(26888598-26888647)
chr5 (1-66)||(31756674-31756739)
chr5 (9-66)||(33817656-33817713)
chr5 (1-50)||(42767689-42767738)
chr5 (9-61)||(2183320-2183372)
chr5 (1-61)||(25567365-25567425)
chr5 (1-61)||(32288453-32288513)
chr5 (1-61)||(36440213-36440273)
[»] chr4 (75 HSPs)
chr4 (1-61)||(52557100-52557160)
chr4 (2-61)||(39448502-39448561)
chr4 (1-61)||(15477658-15477718)
chr4 (1-61)||(44991292-44991352)
chr4 (1-66)||(1433643-1433708)
chr4 (1-66)||(8592341-8592406)
chr4 (1-66)||(25181825-25181890)
chr4 (1-66)||(41752188-41752253)
chr4 (1-66)||(47602956-47603021)
chr4 (1-61)||(624056-624116)
chr4 (1-61)||(12817819-12817879)
chr4 (1-61)||(14985708-14985768)
chr4 (1-61)||(25269377-25269437)
chr4 (1-61)||(30683905-30683965)
chr4 (1-61)||(38339869-38339929)
chr4 (1-61)||(39448865-39448925)
chr4 (1-61)||(43734663-43734723)
chr4 (1-61)||(44957402-44957462)
chr4 (1-61)||(50769198-50769258)
chr4 (1-61)||(53751279-53751339)
chr4 (1-61)||(53995312-53995372)
chr4 (1-66)||(1433284-1433349)
chr4 (1-58)||(15478025-15478082)
chr4 (1-66)||(16037807-16037872)
chr4 (1-66)||(23756172-23756237)
chr4 (1-58)||(36122812-36122869)
chr4 (1-66)||(41751830-41751895)
chr4 (1-66)||(52557459-52557524)
chr4 (1-61)||(6505550-6505610)
chr4 (1-61)||(6711976-6712036)
chr4 (1-61)||(8398044-8398104)
chr4 (1-61)||(8591982-8592042)
chr4 (1-61)||(14985344-14985404)
chr4 (1-61)||(16038171-16038231)
chr4 (1-61)||(19508425-19508485)
chr4 (1-61)||(21763193-21763253)
chr4 (1-61)||(24898202-24898262)
chr4 (1-61)||(24898566-24898626)
chr4 (1-61)||(36122446-36122506)
chr4 (1-61)||(38339505-38339565)
chr4 (1-61)||(42855352-42855412)
chr4 (1-61)||(43566391-43566451)
chr4 (1-61)||(43734299-43734359)
chr4 (1-61)||(44957734-44957794)
chr4 (1-61)||(44991655-44991715)
chr4 (1-61)||(47603738-47603798)
chr4 (1-61)||(50768834-50768894)
chr4 (1-61)||(52692037-52692097)
chr4 (1-61)||(53259515-53259575)
chr4 (1-61)||(53750915-53750975)
chr4 (1-61)||(55022297-55022357)
chr4 (1-66)||(623692-623757)
chr4 (1-66)||(44125842-44125907)
chr4 (1-66)||(52692812-52692876)
chr4 (1-61)||(4513293-4513353)
chr4 (1-61)||(12818183-12818243)
chr4 (1-61)||(19088354-19088414)
chr4 (1-61)||(19088718-19088778)
chr4 (9-61)||(20888164-20888216)
chr4 (1-61)||(21763558-21763618)
chr4 (1-61)||(33091466-33091526)
chr4 (1-61)||(33091830-33091890)
chr4 (1-61)||(46849682-46849742)
chr4 (1-61)||(53994947-53995007)
chr4 (6-61)||(23755436-23755491)
chr4 (1-59)||(44125635-44125693)
chr4 (1-50)||(20614128-20614177)
chr4 (12-61)||(42855716-42855765)
chr4 (1-50)||(56270557-56270606)
chr4 (1-61)||(25182189-25182249)
chr4 (1-61)||(30683539-30683599)
chr4 (1-61)||(31214175-31214235)
chr4 (1-61)||(41878235-41878295)
chr4 (1-61)||(46850046-46850106)
chr4 (1-61)||(55022437-55022497)
[»] chr1 (66 HSPs)
chr1 (1-61)||(10831144-10831204)
chr1 (1-61)||(23598085-23598145)
chr1 (1-61)||(1762687-1762747)
chr1 (1-61)||(1763051-1763111)
chr1 (1-61)||(16023910-16023970)
chr1 (1-61)||(20306015-20306075)
chr1 (1-61)||(23476718-23476778)
chr1 (1-61)||(35612459-35612519)
chr1 (1-61)||(44323037-44323097)
chr1 (1-61)||(46593607-46593667)
chr1 (1-61)||(49643684-49643744)
chr1 (1-66)||(12481072-12481137)
chr1 (1-66)||(31703985-31704050)
chr1 (1-66)||(32047756-32047821)
chr1 (1-61)||(5537181-5537241)
chr1 (1-61)||(8762776-8762836)
chr1 (1-61)||(12481436-12481496)
chr1 (1-61)||(16024274-16024334)
chr1 (1-61)||(37304041-37304101)
chr1 (1-61)||(45053066-45053126)
chr1 (1-66)||(4696895-4696960)
chr1 (1-61)||(2064588-2064648)
chr1 (1-61)||(6798184-6798244)
chr1 (1-61)||(8760285-8760345)
chr1 (1-61)||(9006204-9006264)
chr1 (1-61)||(10831963-10832023)
chr1 (1-61)||(12127070-12127130)
chr1 (1-61)||(23476354-23476414)
chr1 (1-61)||(26707209-26707269)
chr1 (1-61)||(27547682-27547742)
chr1 (1-61)||(27548046-27548106)
chr1 (1-61)||(28884800-28884860)
chr1 (1-61)||(34966316-34966376)
chr1 (9-61)||(34967099-34967151)
chr1 (1-61)||(35612095-35612155)
chr1 (1-61)||(37284741-37284801)
chr1 (1-61)||(37467597-37467657)
chr1 (1-61)||(37576558-37576618)
chr1 (1-61)||(38000502-38000562)
chr1 (1-61)||(39486215-39486275)
chr1 (1-61)||(45843494-45843554)
chr1 (1-61)||(49140156-49140216)
chr1 (1-60)||(49644048-49644107)
chr1 (1-50)||(28884030-28884079)
chr1 (1-62)||(46289337-46289398)
chr1 (5-61)||(3089359-3089415)
chr1 (1-61)||(5536411-5536471)
chr1 (1-61)||(9006567-9006627)
chr1 (1-61)||(13109204-13109264)
chr1 (1-61)||(13183779-13183839)
chr1 (1-61)||(25995797-25995857)
chr1 (1-61)||(32048559-32048619)
chr1 (1-61)||(37285104-37285164)
chr1 (1-61)||(37304405-37304465)
chr1 (1-61)||(37576194-37576254)
chr1 (1-61)||(37585706-37585766)
chr1 (1-61)||(38127722-38127782)
chr1 (1-61)||(49140520-49140579)
chr1 (10-61)||(39486569-39486620)
chr1 (12-50)||(52178880-52178918)
chr1 (1-66)||(26723173-26723238)
chr1 (1-50)||(31488408-31488457)
chr1 (1-50)||(35122275-35122324)
chr1 (1-50)||(39851187-39851236)
chr1 (1-50)||(52179367-52179416)
chr1 (2-66)||(20306374-20306438)
[»] chr7 (54 HSPs)
chr7 (1-66)||(4155611-4155676)
chr7 (1-61)||(4931650-4931710)
chr7 (1-61)||(33716601-33716661)
chr7 (1-61)||(44332896-44332956)
chr7 (1-59)||(41891979-41892037)
chr7 (1-66)||(41453018-41453083)
chr7 (1-61)||(1114067-1114127)
chr7 (1-61)||(6356662-6356722)
chr7 (1-61)||(6356778-6356838)
chr7 (1-61)||(7578885-7578945)
chr7 (1-61)||(8416498-8416558)
chr7 (1-61)||(10526324-10526384)
chr7 (1-61)||(10526687-10526747)
chr7 (1-61)||(31638320-31638380)
chr7 (1-61)||(35146712-35146772)
chr7 (1-61)||(41453382-41453442)
chr7 (1-66)||(1114417-1114482)
chr7 (1-66)||(8542870-8542935)
chr7 (1-66)||(8936862-8936927)
chr7 (1-66)||(29276888-29276953)
chr7 (1-66)||(29277715-29277780)
chr7 (4-61)||(36673991-36674048)
chr7 (1-66)||(48626435-48626500)
chr7 (1-61)||(6356299-6356359)
chr7 (1-61)||(7579249-7579309)
chr7 (1-61)||(16867720-16867780)
chr7 (1-61)||(19681508-19681568)
chr7 (1-61)||(21391203-21391263)
chr7 (1-61)||(21391567-21391627)
chr7 (1-61)||(31637956-31638016)
chr7 (1-61)||(41192062-41192122)
chr7 (1-61)||(43247428-43247488)
chr7 (6-61)||(36423746-36423801)
chr7 (7-61)||(41752027-41752081)
chr7 (1-66)||(8417308-8417373)
chr7 (1-66)||(28286130-28286195)
chr7 (9-61)||(36283582-36283635)
chr7 (1-61)||(6357142-6357202)
chr7 (1-61)||(8542512-8542572)
chr7 (1-61)||(17363613-17363673)
chr7 (1-61)||(19681872-19681932)
chr7 (1-61)||(31075570-31075630)
chr7 (1-61)||(35147066-35147126)
chr7 (1-61)||(36282799-36282859)
chr7 (1-61)||(48626076-48626136)
chr7 (7-61)||(7909543-7909597)
chr7 (12-66)||(28263520-28263574)
chr7 (1-61)||(8937226-8937286)
chr7 (12-61)||(17359205-17359254)
chr7 (1-58)||(28286497-28286554)
chr7 (1-61)||(17749948-17750008)
chr7 (9-61)||(28297840-28297892)
chr7 (1-61)||(34037288-34037348)
chr7 (1-61)||(38677055-38677115)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-61)||(8805-8865)
[»] scaffold0115 (2 HSPs)
scaffold0115 (1-61)||(22530-22590)
scaffold0115 (1-61)||(21525-21585)
[»] chr2 (48 HSPs)
chr2 (1-61)||(15405769-15405829)
chr2 (1-61)||(17032606-17032666)
chr2 (1-66)||(12860393-12860458)
chr2 (1-61)||(16305037-16305098)
chr2 (1-61)||(7495993-7496053)
chr2 (1-61)||(8962373-8962433)
chr2 (1-61)||(13193001-13193061)
chr2 (1-61)||(15744470-15744530)
chr2 (1-61)||(16305402-16305462)
chr2 (1-61)||(17050942-17051002)
chr2 (1-61)||(24138081-24138141)
chr2 (1-61)||(30898678-30898738)
chr2 (1-61)||(34735356-34735416)
chr2 (1-61)||(34735720-34735780)
chr2 (1-61)||(38333057-38333117)
chr2 (1-66)||(8963189-8963254)
chr2 (1-66)||(15744819-15744884)
chr2 (1-66)||(24372339-24372404)
chr2 (1-66)||(29472255-29472320)
chr2 (1-61)||(7496356-7496416)
chr2 (1-61)||(8173898-8173958)
chr2 (1-61)||(8174262-8174322)
chr2 (1-61)||(10991864-10991924)
chr2 (1-61)||(13193365-13193425)
chr2 (1-61)||(15406133-15406193)
chr2 (2-66)||(17052426-17052490)
chr2 (1-61)||(19815717-19815777)
chr2 (1-61)||(19816081-19816141)
chr2 (1-61)||(24371980-24372040)
chr2 (1-61)||(36713962-36714022)
chr2 (1-61)||(41474459-41474519)
chr2 (1-50)||(2147898-2147947)
chr2 (1-66)||(29472614-29472679)
chr2 (1-61)||(7469179-7469239)
chr2 (1-61)||(26181713-26181773)
chr2 (1-61)||(26182077-26182137)
chr2 (1-61)||(36713601-36713661)
chr2 (1-61)||(38332717-38332777)
chr2 (12-66)||(2148258-2148312)
chr2 (1-50)||(2804971-2805020)
chr2 (1-50)||(13479428-13479477)
chr2 (1-50)||(15044752-15044801)
chr2 (13-66)||(23992214-23992267)
chr2 (1-50)||(33200041-33200090)
chr2 (1-50)||(38807181-38807230)
chr2 (1-61)||(7469535-7469595)
chr2 (1-61)||(19847695-19847755)
chr2 (1-61)||(33470300-33470360)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-66)||(73133-73198)
scaffold0029 (1-61)||(72775-72835)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-61)||(24175-24235)
scaffold0186 (1-66)||(24534-24599)
[»] scaffold0134 (2 HSPs)
scaffold0134 (2-61)||(14149-14208)
scaffold0134 (1-61)||(14512-14572)
[»] scaffold0340 (2 HSPs)
scaffold0340 (1-66)||(18645-18710)
scaffold0340 (1-61)||(18286-18346)
[»] scaffold0182 (2 HSPs)
scaffold0182 (1-58)||(20088-20145)
scaffold0182 (1-61)||(19721-19781)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-61)||(20764-20824)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-61)||(45769-45829)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-61)||(50489-50549)
scaffold0019 (1-61)||(50853-50914)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-61)||(113406-113466)
scaffold0003 (1-61)||(349449-349509)
scaffold0003 (1-61)||(349086-349146)
[»] scaffold0225 (2 HSPs)
scaffold0225 (1-66)||(9795-9860)
scaffold0225 (1-66)||(10928-10993)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-61)||(15825-15885)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-61)||(81871-81931)
scaffold0032 (1-61)||(90815-90875)
[»] scaffold0001 (1 HSPs)
scaffold0001 (7-61)||(144039-144093)
[»] scaffold0246 (1 HSPs)
scaffold0246 (6-58)||(6374-6426)


Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 12643953 - 12643684
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgggtgacatactttttgacaacaaccatgcccaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  12643953 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttattttgggtgacatactttttgacaaccaccatgcccaatt 12643854  T
Q  101 tgtgatggaagtgccatagtgttttatggcggcttaaaatgatggtttttgtcttacggccatcctcaattgttgattgacaattggtaaaaccgacata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12643853 tgtgatggaagtgccatagtgttttatggcggcttaaaatgatggtttttgtcttacggccatcctcaattgttgattgacaattggtaaaaccgacata 12643754  T
Q  201 catacaaaattttgaaaagaaaacaatgcctaaagagggaaaagattaaaatgctccgtggagaaggacg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12643753 catacaaaattttgaaaagaaaacaatgcctaaagagggaaaagattaaaatgctccgtggagaaggacg 12643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1652008 - 1651948
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  1652008 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 1651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1740384 - 1740324
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  1740384 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 1740324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15741669 - 15741604
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  15741669 ttttggtcccttaactatttaattggtatcggtttggtcctctaactaaattttgatttattttgg 15741604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24652836 - 24652901
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||||| | |||||||| ||||    
T  24652836 ttttggtcctctaactatttaattggtaacggtttggtcctctaactaaaaaatgatttattttgg 24652901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1432144 - 1432204
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  1432144 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 1432204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11174071 - 11174011
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  11174071 ttttggtcctctaactatttaattggtatctgattggtcctctaactaaaaattgatttat 11174011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11920209 - 11920149
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  11920209 ttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 11920149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15048412 - 15048472
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  15048412 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 15048472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15048836 - 15048776
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  15048836 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 15048776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15872058 - 15871998
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||||||||   |||||||||||| |||| ||||||||||    
T  15872058 ttttggtcctctaactatttaatttgtatcagattggtcctctaaataaaaattgatttat 15871998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22763370 - 22763310
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  22763370 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 22763310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33819798 - 33819858
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  33819798 ttttggtcctctaattatttaattggtatcggattggtcctctaactaaaaattgatttat 33819858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37569327 - 37569387
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  37569327 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 37569387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40659996 - 40660056
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| || ||| |||||||||| ||||||||||    
T  40659996 ttttggtcctctaactatttaattggtatcgaattagtcatctaactaaaaattgatttat 40660056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40660323 - 40660263
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| ||  |||||| ||||||||||||||||| ||||||||||    
T  40660323 ttttggtcctctaactatttagttgttatcgaattggtcctctaactaaaaattgatttat 40660263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45276610 - 45276670
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  45276610 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 45276670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24666115 - 24666050
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||| || ||||||||| |||||||| | |||||||| ||||    
T  24666115 ttttggtcctctaactatttaattggtaacggtttggtcctttaactaaaaaatgatttattttgg 24666050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34470981 - 34470916
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| |||||||||| ||||    
T  34470981 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttgg 34470916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45077640 - 45077575
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||| ||| |||||   ||||||||||||||||| |||||||||| ||||    
T  45077640 ttttggtcctctaactatttgattagtatcagattggtcctctaactaaaaattgatttattttgg 45077575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1646514 - 1646574
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||| ||||||||||| ||||||||||    
T  1646514 ttttggtcctctaactatttaattggtatcagattggttctctaactaaaaattgatttat 1646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1646943 - 1646883
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||||  |||||| |||||||||| ||||||||||    
T  1646943 ttttcgtcctctaactatttaattggtatcggattggtcatctaactaaaaattgatttat 1646883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1739961 - 1740021
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||  ||||||  || |||||||||||||| ||||||||||    
T  1739961 ttttggtcctctaactatttaatcggtatcggattagtcctctaactaaaaattgatttat 1740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5435337 - 5435277
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||||||| ||||||||||    
T  5435337 ttttggtcctctaactatataattggtatcggattggtgctctaactaaaaattgatttat 5435277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7535270 - 7535210
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  7535270 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttat 7535210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45077234 - 45077294
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||||||    
T  45077234 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttat 45077294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45277033 - 45276973
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||| ||||||    
T  45277033 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaatttatttat 45276973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15740626 - 15740691
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  15740626 ttttggtccattaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttgg 15740691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15871634 - 15871699
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||| |||||||||||||  |||||  ||||||||||||||||| ||| |||||| ||||    
T  15871634 ttttggtcctttaactatttaattgatatcggattggtcctctaactaaaaattaatttattttgg 15871699  T

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Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18476117 - 18476068
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  |||||||||||||||||||| |||||||| |||||||||    
T  18476117 ttttggtcccttaactatttaatttgtatcgctttggtcccctaactaaa 18476068  T

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Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 27669440 - 27669489
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  27669440 taactatttaattggtatcggattggtcctctaactaaaaattgatttat 27669489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5152971 - 5152911
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||| ||| ||||||| ||||||  ||||||||||||||||| ||||||||||    
T  5152971 tttttgtcctctgactgtttaattggtatcggattggtcctctaactaaaaattgatttat 5152911  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5434913 - 5434973
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||| |||||  |||||||||    
T  5434913 ttttggtcctctaactatttaattggtatcggattgatcctctacctaaaatttgatttat 5434973  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27473085 - 27473145
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| ||  ||||   ||||||||||||||||| ||||||||||    
T  27473085 ttttggtcctctaactatttagttgatatcagattggtcctctaactaaaaattgatttat 27473145  T

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Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27473508 - 27473448
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||| |||||||| |||||   || |||||||||||||| ||||||||||    
T  27473508 ttttggtcctctaacaatttaattggtatcagattagtcctctaactaaaaattgatttat 27473448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29770436 - 29770372
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttg 65  Q
    |||||||||  ||||||||||||| || ||| ||||||||  ||||||||| |||||||||||||    
T  29770436 ttttggtcccttaactatttaattggtttcggtttggtcccttaactaaattttgatttatcttg 29770372  T

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Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33296121 - 33296061
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||| ||||||    
T  33296121 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattaatttat 33296061  T

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Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38588600 - 38588660
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  38588600 ttttcgtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 38588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38589024 - 38588964
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| |||| |  ||| ||||||||||||| ||||||||||    
T  38589024 ttttggttctctaactatttaattggtattggattgatcctctaactaaaaattgatttat 38588964  T

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Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11707763 - 11707821
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattt 59  Q
    ||||| ||||||||||||||| || |||||   ||||||||||||||||| ||||||||    
T  11707763 ttttgatcctctaactatttagttggtatcagattggtcctctaactaaaaattgattt 11707821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 27669851 - 27669797
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| |||||   |||||| |||||||||| ||||||||||    
T  27669851 tcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttat 27669797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14897441 - 14897392
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  14897441 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 14897392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33099015 - 33098966
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||||||||||||  ||||||||    
T  33099015 ttttggtcccttaactatttaattggtatcgatttggtcccttaactaaa 33098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45123660 - 45123611
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  45123660 ttttggtcccttaactatttaattggtatcgttttggtcctttaactaaa 45123611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1869946 - 1870006
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||   ||| ||||||||||||| ||| ||||||    
T  1869946 tttttgtcctctaactatttaattggtatcagattgatcctctaactaaaaattaatttat 1870006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7949425 - 7949485
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   |||||| | ||| |||| ||||||||||    
T  7949425 ttttggtcctctaactatttaattggtatcagattggtcttttaattaaaaattgatttat 7949485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22762526 - 22762586
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||  |||||||| |||| ||||||||||    
T  22762526 ttttggtcatctaactatttaattggtatcggattaatcctctaattaaaaattgatttat 22762586  T

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Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33295749 - 33295809
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   |||||| ||||| |||| ||||||||||    
T  33295749 ttttggtcctctaactatttagttggtatcagattggtcttctaattaaaaattgatttat 33295809  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44595038 - 44594978
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||||||  ||| |  || |||||||||||||| ||||||||||    
T  44595038 tttttgtcctctaactatttaattgatattggattagtcctctaactaaaaattgatttat 44594978  T

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Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 28869966 - 28869815
Alignment:
Q  66 ggtgacatactttttgacaacaaccatgcccaatttgtgatggaagtgccatagtgttttatggcggcttaaaatga-tggtttttgtcttacggccatc 164  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||| ||||||||||||  |||||||||||| | || |||    
T  28869966 ggtgacatactttttgacaaccaccatggccaatttgtgatggaagtgccatgatgttttatggtggcttaaaatgaggggtttttgtctttcagctatc 28869867  T
Q  165 ctcaattgttgattgacaattggtaaaaccgacatacatacaaaattttgaaa 217  Q
    ||||||||| ||||| |||| ||||| |||||||||  |||||||||||||||    
T  28869866 ctcaattgtcgattg-caatcggtaataccgacatatttacaaaattttgaaa 28869815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13866033 - 13866098
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||    
T  13866033 ttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttgg 13866098  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44317652 - 44317587
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||    
T  44317652 ttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttgg 44317587  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49528162 - 49528227
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||    
T  49528162 ttttggtcctctaactatttaattggtatcggtttggtcctctagctaaaaattgatttattttgg 49528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10506385 - 10506325
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  10506385 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 10506325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18464893 - 18464833
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||    
T  18464893 ttttggtcctctaactatttaattggtatcgaattggtcttctaactaaaaattgatttat 18464833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27801502 - 27801562
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  27801502 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 27801562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39241371 - 39241431
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  39241371 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 39241431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54108339 - 54108279
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  54108339 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 54108279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1994182 - 1994247
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  1994182 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 1994247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1999341 - 1999406
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  1999341 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 1999406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47303453 - 47303388
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| |||| |||||||||| ||||    
T  47303453 ttttggtcctctaactatttaattggtatcggattggtcctctaagtaaaaattgatttattttgg 47303388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4757930 - 4757870
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  4757930 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 4757870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5900860 - 5900800
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  5900860 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 5900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8474283 - 8474223
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| || ||||||||| |||| ||||||||||    
T  8474283 ttttggtcctctaactatttaattggtatcgaattagtcctctaattaaaaattgatttat 8474223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12791613 - 12791553
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||||||||    
T  12791613 ttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaattgatttat 12791553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21569182 - 21569122
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  21569182 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 21569122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22202053 - 22201993
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  22202053 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 22201993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27801926 - 27801866
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||| | ||||||||    
T  27801926 ttttggtcctctaactatttaattggtatcgaattggtcctctaattaaaaaatgatttat 27801866  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39664197 - 39664257
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| | ||||||||    
T  39664197 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaaatgatttat 39664257  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42592221 - 42592161
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||| | ||||||||||||||||| ||||||||||    
T  42592221 ttttggtcctctaactatttagttggtatcaaattggtcctctaactaaaaattgatttat 42592161  T

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Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43844472 - 43844412
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| |||||| |||||||| ||||||||| ||||||||||    
T  43844472 ttttggtcctttaactatttaattagtatcggtttggtcccctaactaaaaattgatttat 43844412  T

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Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51509132 - 51509192
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  51509132 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 51509192  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54107915 - 54107975
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  54107915 ttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 54107975  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 46152629 - 46152688
Alignment:
Q  2 tttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||| | ||||| || |||||||||||||| ||||||||||    
T  46152629 tttggtcctctaactatttaattggcatcgaattagtcctctaactaaaaattgatttat 46152688  T

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Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4757507 - 4757572
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || | ||||  ||||||||||||||||| |||||||||| ||||    
T  4757507 ttttggtcctctaactatttagttggaatcggattggtcctctaactaaaaattgatttattttgg 4757572  T

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Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4773679 - 4773614
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| |||||||||| ||||    
T  4773679 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttattttgg 4773614  T

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Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5900436 - 5900501
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||| |||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  5900436 ttttggtcatctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 5900501  T

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Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30681854 - 30681789
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||| |  |||||||||||||||||| | |||||||| ||||    
T  30681854 ttttggtcctctaactatttaattggtaacagtttggtcctctaactaaaaaatgatttattttgg 30681789  T

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Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1994605 - 1994545
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  1994605 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 1994545  T

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Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11256540 - 11256480
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| | ||||||||    
T  11256540 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaaatgatttat 11256480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15790692 - 15790752
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  15790692 ttttggtcatctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 15790752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15986671 - 15986611
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| |||||| || ||||||  ||||||||||||||||| ||||||||||    
T  15986671 ttttggtcctctaattatttagttggtatcggattggtcctctaactaaaaattgatttat 15986611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16932043 - 16931983
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| ||||||| ||||||  || |||||||||||||| ||||||||||    
T  16932043 ttttggtcctctaactttttaattggtatcggatttgtcctctaactaaaaattgatttat 16931983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18464469 - 18464529
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  18464469 ttttgctcctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 18464529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22201629 - 22201689
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||| |||| ||||||||||    
T  22201629 ttttggtcctctaactatttaattggtatcggattgatcctctaaataaaaattgatttat 22201689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24428580 - 24428640
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||| |||| |||||   ||||||||||||||||| ||||||||||    
T  24428580 ttttggtcctctaactattcaattggtatcagattggtcctctaactaaaaattgatttat 24428640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24429004 - 24428944
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  24429004 ttttggtcatctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 24428944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26318195 - 26318255
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  26318195 ttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 26318255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28985522 - 28985582
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   |||||||||||||||||  |||||||||    
T  28985522 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaatttgatttat 28985582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28986578 - 28986518
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  |||||||| |||||||| ||||||||||    
T  28986578 ttttggtcctctaattatttaattggtatcggattggtcctttaactaaaaattgatttat 28986518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32633502 - 32633442
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||  |||||  |||||||| |||||||| ||||||||||    
T  32633502 ttttggtcctctaactatttaattgttatcggattggtcctttaactaaaaattgatttat 32633442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42591797 - 42591857
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||  ||||||  || |||||||||||||| ||||||||||    
T  42591797 ttttggtcctctaactatttaatcggtatcggatttgtcctctaactaaaaattgatttat 42591857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44893753 - 44893813
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| ||||||  |||||| |||||||||| ||||||||||    
T  44893753 ttttggttctctaactatttaattggtatcggattggtcttctaactaaaaattgatttat 44893813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44894177 - 44894117
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  44894177 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttat 44894117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47669272 - 47669332
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||| ||||||    
T  47669272 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattaatttat 47669332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53716307 - 53716367
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  53716307 tttttgtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 53716367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 8473865 - 8473919
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  8473865 tcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 8473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43839984 - 43840038
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||| |||||| |||| ||||||||||||| |||||||||| ||||    
T  43839984 taactatttaattagtatcggtttgatcctctaactaaaaattgatttattttgg 43840038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13867037 - 13866972
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  13867037 ttttggtcccttaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttgg 13866972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20963662 - 20963597
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||| |||||||||||||  ||||||||| ||||    
T  20963662 ttttggtcccttaactatttaattagtatcggtttgatcctctaactaaaatttgatttattttgg 20963597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49529193 - 49529128
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  49529193 ttttggtcccttaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttgg 49529128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4773256 - 4773316
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| |||||||| |||| ||||||||||    
T  4773256 ttttggtcctctaactatttaattggtatcagattgatcctctaattaaaaattgatttat 4773316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7163463 - 7163523
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||| |  |||||| |||||||||| ||| ||||||    
T  7163463 ttttggtcctctaactatttaattggtattggattggtcatctaactaaaaattaatttat 7163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10505961 - 10506021
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || ||||| |||||||| ||||||||||    
T  10505961 ttttggtcctctaactatttaattggtatcagattagtcctttaactaaaaattgatttat 10506021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12203988 - 12203928
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||| |||||||||||||| ||||||  ||| |||||||| |||| ||||||||||    
T  12203988 ttttggtcccctaactatttaattggtatcggattgatcctctaattaaaaattgatttat 12203928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16931619 - 16931679
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||||   ||  ||||| ||||||||||| ||||||||||    
T  16931619 ttttggtcctctaactatttaatttggtacggattggtgctctaactaaaaattgatttat 16931679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21568759 - 21568819
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  ||| |||||||| |||| ||||||||||    
T  21568759 ttttgatcctctaactatttaattggtatcggattgatcctctaattaaaaattgatttat 21568819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21969642 - 21969702
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||| |   || |||||||||||||| ||||||||||    
T  21969642 ttttggtcctctaactatttaattggtaacagattagtcctctaactaaaaattgatttat 21969702  T

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Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21992078 - 21992138
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||| |   || |||||||||||||| ||||||||||    
T  21992078 ttttggtcctctaactatttaattggtaacagattagtcctctaactaaaaattgatttat 21992138  T

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Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26318619 - 26318559
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||  ||||||||||||| ||||||||||    
T  26318619 ttttggtcatctaactatttaattggtatcggattaatcctctaactaaaaattgatttat 26318559  T

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Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29818190 - 29818250
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || ||||||||| |||| ||||||||||    
T  29818190 ttttggtcctctaactatttaattggtatcagattagtcctctaaataaaaattgatttat 29818250  T

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Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39664621 - 39664561
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||| ||||||    
T  39664621 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattaatttat 39664561  T

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Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45306845 - 45306905
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  || ||||||||||||||  |||||||||    
T  45306845 ttttgatcctctaactatttaattggtatcggattagtcctctaactaaaatttgatttat 45306905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45307129 - 45307069
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||| ||||||||||||| ||||||||||    
T  45307129 ttttggtcctctaactatttagttggtatcagattgatcctctaactaaaaattgatttat 45307069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47669696 - 47669636
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||| ||||||||||| ||| ||||||    
T  47669696 ttttggtcctctaactatttatttggtatcggattggttctctaactaaaaattaatttat 47669636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53716730 - 53716670
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| |||||   |||||| |||||||||| ||||||||||    
T  53716730 ttttggtcatctaactatttaattggtatcagattggtcttctaactaaaaattgatttat 53716670  T

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Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54752176 - 54752236
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    |||||||| |||||||| ||||||||||    
T  54752176 ttttggtcctctaactatttaattggtataagattggtcctgtaactaaaaattgatttat 54752236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54752600 - 54752540
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||| ||||||||||| ||||||||||    
T  54752600 ttttggtcctctaactatttagttggtatcagattggttctctaactaaaaattgatttat 54752540  T

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Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 19883671 - 19883617
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| ||||||  ||||| ||||||||||| | ||||||||    
T  19883671 tcctctaactatttaattggtatcggattggttctctaactaaaaaatgatttat 19883617  T

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Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 966993 - 967042
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  966993 ttttggtcccttaactatttaattggtatcgctttggtcctttaactaaa 967042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6099026 - 6098977
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  6099026 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 6098977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7681561 - 7681500
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatc-gatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||| |||| |  |||||||||||| ||||||||||    
T  7681561 ttttggtcctctaattatttaattggtatcggattagtccctctaactaaaaattgatttat 7681500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11256116 - 11256165
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||| ||||||||||||||||||| ||||||  ||| |||||||||||||    
T  11256116 ttttagtcctctaactatttaattggtatcggattgatcctctaactaaa 11256165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13355772 - 13355723
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  13355772 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 13355723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30681042 - 30681091
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||| ||||||||||||||| ||| || |||||| |||||||||||    
T  30681042 ttttggtcatctaactatttaattggtaacggtttggttctctaactaaa 30681091  T

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Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40639490 - 40639425
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||| ||||  ||||||||| ||||    
T  40639490 ttttggtcctttaactatttaattagtatcgctttggtcccttaattaaaatttgatttatattgg 40639425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 12203570 - 12203618
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattg 55  Q
    |||||||||||||||||| ||||||  |||||| |||||||||| ||||    
T  12203570 tcctctaactatttaattggtatcggattggtcatctaactaaaaattg 12203618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15986248 - 15986308
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  || |||| ||| ||||| ||||||||||    
T  15986248 ttttgatcctctaactatttaattggtatcggattagtcccctagctaaaaattgatttat 15986308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22151858 - 22151918
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| ||| |   || |||||||||||||| ||||||||||    
T  22151858 ttttggtcctataactatttaattggtaacagattagtcctctaactaaaaattgatttat 22151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29818614 - 29818554
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| || ||||| ||||||||| |||||   ||||||||||||||||| ||||||||||    
T  29818614 ttttgatcttctaattatttaattggtatcagattggtcctctaactaaaaattgatttat 29818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 32309649 - 32309601
Alignment:
Q  2 tttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    ||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  32309649 tttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 32309601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44316640 - 44316700
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||  ||||||||||||| |||||| ||| |||| |||||||||  |||||||||    
T  44316640 ttttggtcccttaactatttaattagtatcggtttagtcccctaactaaaatttgatttat 44316700  T

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Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17244677 - 17244742
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||    
T  17244677 ttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttgg 17244742  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32993452 - 32993392
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  32993452 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 32993392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6228743 - 6228808
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||| ||||||||| ||||||||| |||||| |||||||||||||||||| |||||||||| ||||    
T  6228743 ttttagtcctctaattatttaattggtatcggtttggtcctctaactaaaaattgatttattttgg 6228808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15932993 - 15932928
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  15932993 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 15932928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21856568 - 21856633
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  21856568 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 21856633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2517015 - 2517075
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  2517015 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 2517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2517439 - 2517379
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  2517439 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 2517379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3423183 - 3423243
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  3423183 ttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 3423243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6137814 - 6137754
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||||||| ||||||||||    
T  6137814 ttttggtcctctaactatttaattggtatcggattggtcctttaactaaaaattgatttat 6137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6532205 - 6532265
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  6532205 tttttgtcctctaactatttaatttgtatcggattgatcctctaactaaaaattgatttat 6532265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7438817 - 7438877
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  7438817 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 7438877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9046523 - 9046463
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  9046523 ttttggtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 9046463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15932743 - 15932803
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  15932743 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 15932803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18053390 - 18053330
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  18053390 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 18053330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25176676 - 25176736
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  25176676 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 25176736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32753610 - 32753550
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  32753610 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 32753550  T

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Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34517285 - 34517345
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| || |||  ||||||||||||||||| ||||||||||    
T  34517285 ttttggtcctctaactatttaattggtgtcggattggtcctctaactaaaaattgatttat 34517345  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34518129 - 34518069
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||| ||||||| ||||||||||    
T  34518129 ttttggtcctctaactatttaattggtatcggattggtcctcaaactaaaaattgatttat 34518069  T

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Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34891081 - 34891021
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  34891081 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 34891021  T

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Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21856992 - 21856927
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||| |||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  21856992 ttttggtcctctaagtatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 21856927  T

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Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25180282 - 25180225
Alignment:
Q  4 tggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  25180282 tggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 25180225  T

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Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34890657 - 34890722
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||| |||||||||||||||||| |||| |  ||||||||||||||||| |||||||||| ||||    
T  34890657 ttttgttcctctaactatttaattggtattggattggtcctctaactaaaaattgatttattttgg 34890722  T

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Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 978428 - 978488
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||| ||||||||||||| ||||||||||    
T  978428 ttttggtcctctaactatttagttggtatcgtattgatcctctaactaaaaattgatttat 978488  T

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Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5311263 - 5311203
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  5311263 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 5311203  T

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Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5938250 - 5938190
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||| ||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  5938250 ttttggtcatctaattatttaattggtatcggattggtcctctaactaaaaattgatttat 5938190  T

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Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7271066 - 7271006
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  7271066 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttat 7271006  T

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Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9046099 - 9046159
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   |||||||||||| |||| ||||||||||    
T  9046099 ttttggtcctctaactatttaattggtatcagattggtcctctaagtaaaaattgatttat 9046159  T

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Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18052969 - 18053029
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||| ||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  18052969 ttttgatcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttat 18053029  T

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Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24744341 - 24744401
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  24744341 tttttgtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 24744401  T

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Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31237759 - 31237819
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || || ||||||||||| ||||||||||    
T  31237759 ttttggtcctctaactatttaattggtatcggattagttctctaactaaaaattgatttat 31237819  T

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Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31247129 - 31247189
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || || ||||||||||| ||||||||||    
T  31247129 ttttggtcctctaactatttaattggtatcggattagttctctaactaaaaattgatttat 31247189  T

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Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31247553 - 31247493
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||| ||||||    
T  31247553 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattaatttat 31247493  T

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Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32753190 - 32753250
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||||||    
T  32753190 ttttggtcctctaactatttaattagtatcagattgatcctctaactaaaaattgatttat 32753250  T

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Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34994393 - 34994453
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  34994393 ttttggtcctttaactatttaattggtattggattggtcctctaactaaaaattgatttat 34994453  T

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Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35167503 - 35167563
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||| ||||||||||||| ||||||||||    
T  35167503 ttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattgatttat 35167563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14276412 - 14276471
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattta 60  Q
    ||||||||||||| |||||||||| ||||||  ||| ||||||||||||| |||||||||    
T  14276412 ttttggtcctctacctatttaattggtatcggattgatcctctaactaaaaattgattta 14276471  T

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Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35167892 - 35167833
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattta 60  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| |||||||||    
T  35167892 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgattta 35167833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7269970 - 7270024
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  7269970 tcctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 7270024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7270390 - 7270332
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattt 59  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||||||| ||| ||||    
T  7270390 ttttggtcctttaactatttaattggtatcgaattgatcctctaactaaaaattaattt 7270332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6137392 - 6137441
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| ||||    
T  6137392 ttttggtcctctaactatttaattggtatcggattggtcctctaattaaa 6137441  T

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Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5937826 - 5937886
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| | ||||||||||| ||||||||||    
T  5937826 ttttggtcctctaactatttaattggtatcagattgattctctaactaaaaattgatttat 5937886  T

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Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15286358 - 15286418
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| || |||  |||||||||| |||||| ||||||||||    
T  15286358 ttttgatcctctaactatttaattggtgtcggattggtcctctgactaaaaattgatttat 15286418  T

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Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24744757 - 24744698
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||  ||| ||||||||||||||| ||||||||||    
T  24744757 ttttggtcctctaactatttagttggtattaatt-ggtcctctaactaaaaattgatttat 24744698  T

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Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26600370 - 26600430
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||| |||| ||||||  || |||||||||||||| ||| ||||||    
T  26600370 ttttggtcctctaactattaaattggtatcggattagtcctctaactaaaaattaatttat 26600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29261388 - 29261328
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  29261388 ttttagtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 29261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31238183 - 31238124
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||| ||||||||||| ||||||||||    
T  31238183 ttttggtcctctaactatttagttggtatcggattggt-ctctaactaaaaattgatttat 31238124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6229759 - 6229695
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  6229759 ttttggtcccttaactatttaattagtatcggtttggtcc-ctaactaaaatttgatttattttgg 6229695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27829402 - 27829337
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||| |||||||||||| ||| |  ||||||||||||| |||| | |||||||| ||||    
T  27829402 ttttggtcctccaactatttaattggtaacagtttggtcctctaattaaaaaatgatttattttgg 27829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 29260547 - 29260604
Alignment:
Q  4 tggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| |||||   ||||||||| ||||||| ||| ||||||    
T  29260547 tggtcctctaactatttaattggtatcagattggtcctcaaactaaaaattaatttat 29260604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5639610 - 5639550
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| || ||||||||||||||| ||||||  || |||||||||||||| ||| ||||||    
T  5639610 ttttgatcttctaactatttaattggtatcggattagtcctctaactaaaaatttatttat 5639550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6235934 - 6235994
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || ||||| ||| |||| ||||||||||    
T  6235934 ttttggtcctctaactatttaattggtatcagattagtcctataattaaaaattgatttat 6235994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6236358 - 6236298
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||| ||||||||||||||  |||    ||||||||||||||||| ||||||||||    
T  6236358 ttttggtcccctaactatttaattgatatttgattggtcctctaactaaaaattgatttat 6236298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21540414 - 21540354
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| |||||   || ||||||||| |||| ||||||||||    
T  21540414 ttttggtcctttaactatttaattggtatcagattagtcctctaattaaaaattgatttat 21540354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26600784 - 26600724
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||| || |||| |  |||||| |||||||||| ||||||||||    
T  26600784 tttttgtcctctaactatttagttggtattggattggtcttctaactaaaaattgatttat 26600724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26957398 - 26957338
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||    |||||||| |||||||| ||||||||||    
T  26957398 ttttggtcatctaactatttaattggtattagattggtcctttaactaaaaattgatttat 26957338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34994817 - 34994757
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||| ||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  34994817 ttttagtcatctaactatttaattggtattagattggtcctctaactaaaaattgatttat 34994757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19184610 - 19184675
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||    
T  19184610 ttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttgg 19184675  T

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Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2182956 - 2183016
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  2182956 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 2183016  T

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Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25183090 - 25183030
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  25183090 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 25183030  T

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Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38958737 - 38958797
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  38958737 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 38958797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38959160 - 38959100
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  38959160 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 38959100  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1140202 - 1140142
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  1140202 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 1140142  T

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Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9989336 - 9989396
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  9989336 ttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 9989396  T

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Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24040098 - 24040158
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  24040098 ttttggtcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttat 24040158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27186310 - 27186250
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  27186310 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 27186250  T

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Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36440637 - 36440577
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  36440637 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 36440577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39325425 - 39325485
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||| ||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  39325425 ttttggtcctctgactatttaattggtatcggattggtcctctaactaaaaattgatttat 39325485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34264789 - 34264730
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattta 60  Q
    ||||||||||| |||||||||||| |||| || ||||||||||||||||| |||||||||    
T  34264789 ttttggtcctccaactatttaattggtattgaattggtcctctaactaaaaattgattta 34264730  T

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Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 27185887 - 27185952
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   |||||| |||||||||| |||||||||| ||||    
T  27185887 ttttggtcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttattttgg 27185952  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11315971 - 11316031
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||| ||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  11315971 tttttgtcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttat 11316031  T

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Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16860316 - 16860376
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||  |||||   ||||||||||||||||| ||||||||||    
T  16860316 ttttggtcctctaactatttaatcggtatcagattggtcctctaactaaaaattgatttat 16860376  T

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Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24040524 - 24040464
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||| ||||    
T  24040524 ttttggtcctctaactatttaattagtatcggattgatcctctaactaaaaattgacttat 24040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35569788 - 35569848
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| |||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  35569788 ttttggtcttctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 35569848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39325792 - 39325732
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||| ||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  39325792 ttttagtcctctaattatttaattggtatcggattggtcctctaactaaaaattgatttat 39325732  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37424701 - 37424637
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||| |||||| |  || |||||||||||||| |||||||||| ||||    
T  37424701 ttttggtcctctaactatttaa-ttgtattggattagtcctctaactaaaaattgatttattttgg 37424637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19128490 - 19128434
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgat 57  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||    
T  19128490 ttttggtcctctaactatttaattagtatcagattgatcctctaactaaaaattgat 19128434  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32288091 - 32288151
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    |||||| |||||||||| ||||||||||    
T  32288091 ttttggtcctctaactatttaattggtattagattggtcatctaactaaaaattgatttat 32288151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37424275 - 37424335
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| ||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  37424275 ttttgatcctctaactatttatttggtatcagattggtcctctaactaaaaattgatttat 37424335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6157542 - 6157493
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||||||||||||  ||||||||    
T  6157542 ttttggtcccttaactatttaattggtatcgatttggtcccttaactaaa 6157493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 11316376 - 11316331
Alignment:
Q  16 tatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  11316376 tatttaattggtatcggattggtcctctaactaaaaattgatttat 11316331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19185621 - 19185556
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||| | |||||||| |||||||||  ||||||||| ||||    
T  19185621 ttttggtcccttaactatttaattagtattggtttggtcccctaactaaaatttgatttattttgg 19185556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26888598 - 26888647
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  |||||||||||||||||||| ||||||||  ||||||||    
T  26888598 ttttggtcccttaactatttaatttgtatcgctttggtcccttaactaaa 26888647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31756739 - 31756674
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||  |||||||||||||| ||| || ||| |||||||||||||| | |||||||| ||||    
T  31756739 ttttggtctcctaactatttaattggtaacggtttagtcctctaactaaaaaatgatttattttgg 31756674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 33817713 - 33817656
Alignment:
Q  9 ctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||| ||||||  ||| ||||||||||||| ||| |||||| ||||    
T  33817713 ctctaactatttaattggtatcggattgatcctctaactaaaaatttatttattttgg 33817656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42767738 - 42767689
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  |||||||||| || |||||||||||||||| ||||||||    
T  42767738 ttttggtcccttaactatttatttggtatcgatttggtcctttaactaaa 42767689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 2183372 - 2183320
Alignment:
Q  9 ctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| ||||||  ||| |||| |||||||| ||||||||||    
T  2183372 ctctaactatttaattggtatcggattgatcctttaactaaaaattgatttat 2183320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25567425 - 25567365
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||| ||||||||||||| ||||||  ||||| || |||||||| ||||||||||    
T  25567425 ttttagtcctttaactatttaattggtatcggattggttctttaactaaaaattgatttat 25567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32288513 - 32288453
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| ||||||||||||||||||  |||    ||||||||||||||||| ||||||||||    
T  32288513 ttttgatcctctaactatttaattgatattagattggtcctctaactaaaaattgatttat 32288453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36440213 - 36440273
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| ||||||||||||||| || |||||   ||| ||||||||||||| ||||||||||    
T  36440213 ttttgatcctctaactatttagttggtatcagattgatcctctaactaaaaattgatttat 36440273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52557100 - 52557160
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  52557100 ttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttat 52557160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 39448502 - 39448561
Alignment:
Q  2 tttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  39448502 tttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttat 39448561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15477658 - 15477718
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  15477658 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaacattgatttat 15477718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44991292 - 44991352
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  44991292 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 44991352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1433708 - 1433643
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| |||||||||| ||||    
T  1433708 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttattttgg 1433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8592406 - 8592341
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  8592406 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 8592341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25181825 - 25181890
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| |||||||||  |||||||| |||||||| |||||||||| ||||    
T  25181825 ttttggtcctctaactatttagtttgtatcggattggtcctttaactaaaaattgatttattttgg 25181890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41752253 - 41752188
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||| |||||| ||||    
T  41752253 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattcatttattttgg 41752188  T

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Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47602956 - 47603021
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| |||| |||||||||| ||||    
T  47602956 ttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaattgatttattttgg 47603021  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 624116 - 624056
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  624116 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 624056  T

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Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12817819 - 12817879
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  12817819 ttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 12817879  T

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Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14985768 - 14985708
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||| ||||||||||    
T  14985768 ttttggtcctctaactatttaatttgtatcagattggtcatctaactaaaaattgatttat 14985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25269437 - 25269377
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  25269437 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 25269377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30683965 - 30683905
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  30683965 ttttggtcctctaaatatttaattggtatcggattggtcctctaactaaaaattgatttat 30683905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38339929 - 38339869
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  38339929 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 38339869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39448925 - 39448865
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  39448925 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 39448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43734723 - 43734663
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  43734723 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 43734663  T

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Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44957402 - 44957462
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||| ||| ||||||  ||||||||||||||||| ||||||||||    
T  44957402 ttttggtcctctaactattttattggtatcggattggtcctctaactaaaaattgatttat 44957462  T

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Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50769258 - 50769198
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  50769258 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 50769198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53751339 - 53751279
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  53751339 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 53751279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53995372 - 53995312
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  53995372 ttttggtcctctaactatttaattggtatcgcattagtcctctaactaaaaattgatttat 53995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1433284 - 1433349
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||| ||| |||| |  ||||||||||||||||| |||||||||| ||||    
T  1433284 ttttggtcctctaactatttcattggtattggattggtcctctaactaaaaattgatttattttgg 1433349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15478082 - 15478025
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatt 58  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  15478082 ttttggtcttctaactatttaattggtatcggattggtcctctaactaaaaattgatt 15478025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16037807 - 16037872
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| |||||||||| ||||    
T  16037807 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttgg 16037872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23756237 - 23756172
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||||||| ||| |||||| ||||    
T  23756237 ttttggtcctctaactatttaattggtatcggattggtcctttaactaaaaattaatttattttgg 23756172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36122869 - 36122812
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatt 58  Q
    ||||| |||||||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  36122869 ttttgatcctctaactatttaattggtatcggattggtcctctaactaaaaattgatt 36122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41751830 - 41751895
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||| ||||| ||||||||||||| ||||||  ||||||||||||||||| |||||||||| ||||    
T  41751830 tttttgtcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttattttgg 41751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52557524 - 52557459
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   |||||| |||||||||| |||||||||| ||||    
T  52557524 ttttggtcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttattttgg 52557459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6505550 - 6505610
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| ||||||||||||||||||  |||||  ||||||||||||||||| ||||||||||    
T  6505550 ttttgatcctctaactatttaattgatatcggattggtcctctaactaaaaattgatttat 6505610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6711976 - 6712036
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||| ||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  6711976 ttttggccctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 6712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8398044 - 8398104
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  8398044 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 8398104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8591982 - 8592042
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  8591982 ttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 8592042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14985344 - 14985404
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  14985344 ttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 14985404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16038231 - 16038171
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  16038231 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 16038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19508425 - 19508485
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  ||||||||||||||||  ||||||||||    
T  19508425 ttttgatcctctaactatttaattggtatcggattggtcctctaactaacaattgatttat 19508485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21763193 - 21763253
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  ||||||||| ||||||| ||||||||||    
T  21763193 ttttggtcctctaattatttaattggtatcggattggtcctccaactaaaaattgatttat 21763253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24898202 - 24898262
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||| |||| ||||||||||    
T  24898202 ttttggtcctctaactatttaattggtatcggattgatcctctaattaaaaattgatttat 24898262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24898626 - 24898566
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  24898626 tttttgtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 24898566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36122446 - 36122506
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||| ||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  36122446 ttttggtcctctgactatttaattggtatcagattggtcctctaactaaaaattgatttat 36122506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38339505 - 38339565
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||| | |||||   ||||||||||||||||| ||||||||||    
T  38339505 ttttggtcctctaactatttaactggtatcagattggtcctctaactaaaaattgatttat 38339565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42855352 - 42855412
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||   |||||||||||||||| ||||||||||    
T  42855352 ttttggtcctctaactatttagttggtatcggagtggtcctctaactaaaaattgatttat 42855412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43566391 - 43566451
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  43566391 ttttggtcttctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 43566451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43734299 - 43734359
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| || |||||||    
T  43734299 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaatagatttat 43734359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44957794 - 44957734
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||  |||| | |||||||| |||||||| ||||||||||    
T  44957794 ttttggtcctctaactatttaattgatatcaaattggtcctttaactaaaaattgatttat 44957734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44991715 - 44991655
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||||| || ||||||||||    
T  44991715 ttttggtcctctaactatttaattggtatcggattgatcctctaactgaaaattgatttat 44991655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47603798 - 47603738
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||| ||||||    
T  47603798 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattaatttat 47603738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50768834 - 50768894
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||| ||||||||||||| ||||||| |||||| |||||||||| ||||||||||    
T  50768834 ttttgatcctttaactatttaattggtatcgaattggtcatctaactaaaaattgatttat 50768894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52692037 - 52692097
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  52692037 ttttgatcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 52692097  T

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Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53259575 - 53259515
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||||||    
T  53259575 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttat 53259515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53750915 - 53750975
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||| |||| ||||||  ||||||||||||||||| ||||||||||    
T  53750915 ttttagtcctctaactattaaattggtatcggattggtcctctaactaaaaattgatttat 53750975  T

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Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 55022297 - 55022357
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||||||    
T  55022297 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttat 55022357  T

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Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 623692 - 623757
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||| |||||||||| || ||||||  ||||||||||||||||| |||| ||||| ||||    
T  623692 ttttggtcctttaactatttagttggtatcggattggtcctctaactaaaaattgttttattttgg 623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44125907 - 44125842
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||| ||||||||||||||| || |||  |||||| |||||||||| |||||||||| ||||    
T  44125907 ttttggtcatctaactatttaattggtgtcggattggtcttctaactaaaaattgatttattttgg 44125842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52692876 - 52692812
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||| || ||||||||||  |||||||| ||||||||||||||| |||||||||| ||||    
T  52692876 ttttggtcctttagctatttaattgctatcgatt-ggtcctctaactaaaaattgatttattttgg 52692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4513353 - 4513293
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||| ||||||||||||| ||| ||||||    
T  4513353 ttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattaatttat 4513293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12818243 - 12818183
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  ||||| |||||||||||  |||||||||    
T  12818243 ttttggtcctctaattatttaattggtatcggattggtgctctaactaaaacttgatttat 12818183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19088354 - 19088414
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||   || ||||||||||||| ||||||||||    
T  19088354 ttttggtcctctaactatttagttggtatcggaatgatcctctaactaaaaattgatttat 19088414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19088778 - 19088718
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||  ||||||||||||| ||||||||||    
T  19088778 ttttggtcctctaactatttaattggtatcagattaatcctctaactaaaaattgatttat 19088718  T

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Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 20888164 - 20888216
Alignment:
Q  9 ctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  20888164 ctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 20888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21763618 - 21763558
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    || |||||||||||||| ||||||||||    
T  21763618 ttttggtcctctaactatttaattggtataagattagtcctctaactaaaaattgatttat 21763558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33091466 - 33091526
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||  ||||    ||||||||||||||||| ||||||||||    
T  33091466 ttttggtcctctaactatttaatcagtattagattggtcctctaactaaaaattgatttat 33091526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33091890 - 33091830
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  33091890 ttttagtcctctaactatttaattagtattagattggtcctctaactaaaaattgatttat 33091830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46849682 - 46849742
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  46849682 ttttcgtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 46849742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53994947 - 53995007
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   |||||||| |||||||| ||||||||||    
T  53994947 ttttggtcctctaactatttagttggtatcagattggtcctttaactaaaaattgatttat 53995007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 23755436 - 23755491
Alignment:
Q  6 gtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||| ||| ||||||    
T  23755436 gtcctctaactatttaattggtattggattggtcctctaactaaaaattaatttat 23755491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44125635 - 44125693
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattt 59  Q
    |||||||||| ||||||||||||| ||||  | ||||| ||||||||||| ||||||||    
T  44125635 ttttggtcctttaactatttaattggtattaaattggttctctaactaaaaattgattt 44125693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20614128 - 20614177
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  20614128 ttttggtcccttaactatttaattggtatcgctttggtcctttaactaaa 20614177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 42855765 - 42855716
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||| ||||||  ||||||||| ||||||| ||||||||||    
T  42855765 taactatttaattagtatcggattggtcctccaactaaaaattgatttat 42855716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 56270557 - 56270606
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  56270557 ttttggtcccttaactatttaattggtatcgctttggtcctttaactaaa 56270606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25182249 - 25182189
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| |||||||||||| || |||||   ||| ||||||||||||| ||||||||||    
T  25182249 ttttggtcttctaactatttagttggtatcagattgatcctctaactaaaaattgatttat 25182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30683539 - 30683599
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||| || |||| ||||||||||    
T  30683539 ttttggtcctctaactatttaattggtatcagattgatcctccaattaaaaattgatttat 30683599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31214175 - 31214235
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| || ||||||||||||||| |||||   ||||||||||||||||| ||| ||||||    
T  31214175 ttttgatcatctaactatttaattggtatcagattggtcctctaactaaaaattaatttat 31214235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41878295 - 41878235
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| ||||| | |||   || |||||||||||||| ||||||||||    
T  41878295 ttttggtcctctaactatataattggaatcagattagtcctctaactaaaaattgatttat 41878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46850106 - 46850046
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| |||||||||| |||| |||||   || |||||||||||||| ||||||||||    
T  46850106 ttttggtcatctaactattaaattggtatcagattagtcctctaactaaaaattgatttat 46850046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 55022497 - 55022437
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||||  ||  |||||||| |||| ||||||||||    
T  55022497 tttttgtcctctaactatttaattggtatcggattaatcctctaattaaaaattgatttat 55022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10831144 - 10831204
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  10831144 ttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttat 10831204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23598085 - 23598145
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  23598085 ttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttat 23598145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1762687 - 1762747
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  1762687 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 1762747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1763111 - 1763051
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  1763111 ttttggtcctctaactatttaattggtatcaaattggtcctctaactaaaaattgatttat 1763051  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16023910 - 16023970
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  16023910 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 16023970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20306015 - 20306075
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  20306015 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 20306075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23476778 - 23476718
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  23476778 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 23476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35612519 - 35612459
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  35612519 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 35612459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44323097 - 44323037
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  44323097 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 44323037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46593667 - 46593607
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  46593667 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 46593607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49643684 - 49643744
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  49643684 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 49643744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12481072 - 12481137
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  12481072 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 12481137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31704050 - 31703985
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  31704050 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 31703985  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32047756 - 32047821
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||||| | |||||||| ||||    
T  32047756 ttttggtcctctaactatttaattggtaacggtttggtcctctaactaaaaaatgatttattttgg 32047821  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5537241 - 5537181
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||  ||||||  ||||||||||||||||| ||||||||||    
T  5537241 ttttggtcctctaactatttaatcggtatcggattggtcctctaactaaaaattgatttat 5537181  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8762836 - 8762776
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  8762836 ttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 8762776  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12481496 - 12481436
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  12481496 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 12481436  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16024334 - 16024274
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  16024334 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 16024274  T

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Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37304041 - 37304101
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||| |||||||| ||||||  ||||||||||||||||| ||||||||||    
T  37304041 ttttggtcctctaaccatttaattggtatcggattggtcctctaactaaaaattgatttat 37304101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45053126 - 45053066
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  45053126 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 45053066  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4696895 - 4696960
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||| ||||||||||||||||||| ||||||  |||||||| |||||||| |||||||||| ||||    
T  4696895 ttttagtcctctaactatttaattggtatcggattggtcctataactaaaaattgatttattttgg 4696960  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2064648 - 2064588
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  2064648 ttttgatcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 2064588  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6798244 - 6798184
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  6798244 ttttggtcttctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 6798184  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8760285 - 8760345
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  |||  |||||||||||| ||||||||||    
T  8760285 ttttggtcctctaactatttaattggtatcggattgaccctctaactaaaaattgatttat 8760345  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9006204 - 9006264
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| |||| |||||||| ||||||||||    
T  9006204 ttttggtcctctaactatttaattggtatcggattgatcctttaactaaaaattgatttat 9006264  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10832023 - 10831963
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||| | |||| |  ||||||||||||||||| ||||||||||    
T  10832023 ttttggtcctctaactatttaactggtattggattggtcctctaactaaaaattgatttat 10831963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12127070 - 12127130
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||| ||||||||||| ||||||||||    
T  12127070 ttttggtcctctaactatttagttggtatcggattggttctctaactaaaaattgatttat 12127130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23476354 - 23476414
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  23476354 ttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 23476414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26707209 - 26707269
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   | ||||||||||||||| ||||||||||    
T  26707209 ttttggtcctctaactatttaattggtatcagatcggtcctctaactaaaaattgatttat 26707269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27547682 - 27547742
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| | ||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  27547682 ttttggtcttttaactatttaattggtatcggattggtcctctaactaaaaattgatttat 27547742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27548106 - 27548046
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  27548106 tttttgtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 27548046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28884860 - 28884800
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||  || |||||||||||||||||| | ||||||||    
T  28884860 ttttggtcctctaactatttaattggttacggtttggtcctctaactaaaaaatgatttat 28884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34966316 - 34966376
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||| ||||||||||||||||| ||||||  |||||||||||||||||  |||||||||    
T  34966316 ttttggacctctaactatttaattggtatcggattggtcctctaactaaaacttgatttat 34966376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 34967151 - 34967099
Alignment:
Q  9 ctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  34967151 ctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 34967099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35612095 - 35612155
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  35612095 ttttggtcctctaagtatttaattggtatcggattgatcctctaactaaaaattgatttat 35612155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37284741 - 37284801
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||  |||||  ||||| ||||||||||| ||||||||||    
T  37284741 ttttggtcctctaactatttaattgatatcggattggttctctaactaaaaattgatttat 37284801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37467657 - 37467597
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||| ||||||    
T  37467657 ttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattaatttat 37467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37576618 - 37576558
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  37576618 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 37576558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38000502 - 38000562
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  |||||| ||||| |||| ||||||||||    
T  38000502 ttttggtcctctaactatttaattggtatcggattggtcttctaattaaaaattgatttat 38000562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39486215 - 39486275
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  39486215 ttttggttctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 39486275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45843554 - 45843494
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  45843554 ttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 45843494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49140156 - 49140216
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  49140156 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 49140216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 49644107 - 49644048
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattta 60  Q
    |||||||||||||||||||||||| |||||   |||||||||||| |||| |||||||||    
T  49644107 ttttggtcctctaactatttaattggtatcagattggtcctctaattaaaaattgattta 49644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28884030 - 28884079
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||||||| ||||||||| ||| || ||||||||||||||||||    
T  28884030 ttttggtcctctaattatttaattggtaacggtttggtcctctaactaaa 28884079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46289337 - 46289398
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatc 62  Q
    ||||| |||||||||||||||||| |||||   |||||| |||||||||| |||||||||||    
T  46289337 ttttgatcctctaactatttaattggtatcagattggtcatctaactaaaaattgatttatc 46289398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3089359 - 3089415
Alignment:
Q  5 ggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||| | ||||  ||||| ||||||||||| ||||||||||    
T  3089359 ggtcctctaactatttaattggcatcggattggtactctaactaaaaattgatttat 3089415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5536411 - 5536471
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||| |||||  |||||||||    
T  5536411 ttttggccctctaactatttaattggtatcggattggtcctctacctaaaatttgatttat 5536471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9006627 - 9006567
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||   |||||  ||||||||||||||||| ||||||||||    
T  9006627 ttttggtcttctaactatttaatcgttatcggattggtcctctaactaaaaattgatttat 9006567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13109264 - 13109204
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  13109264 ttttagtcctctaactatttaattggtatccgattagtcctctaactaaaaattgatttat 13109204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13183779 - 13183839
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| |||| || || ||| |||||||||| ||||||||||    
T  13183779 ttttgatcctctaactatttaattggtattgaattagtcttctaactaaaaattgatttat 13183839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25995797 - 25995857
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   |||||||| ||| |||| ||||||||||    
T  25995797 ttttggtcctctaactatttaattggtatcagattggtcctttaattaaaaattgatttat 25995857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32048619 - 32048559
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| ||  || || |||||||||||||||||| | ||||||||    
T  32048619 ttttggtcctctaactatttatttgataacggtttggtcctctaactaaaaaatgatttat 32048559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37285164 - 37285104
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  37285164 ttttggtcctttaactatttaattggtattagattggtcctctaactaaaaattgatttat 37285104  T

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Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37304465 - 37304405
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||| ||||||||||||||||| ||||||  ||| |||| |||||||| ||||||||||    
T  37304465 ttttggccctctaactatttaattggtatcggattgatcctataactaaaaattgatttat 37304405  T

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Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37576194 - 37576254
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| |||||||| |||| ||||||  || |||||||||||||| ||||||||||    
T  37576194 ttttggtcctttaactattaaattggtatcggattagtcctctaactaaaaattgatttat 37576254  T

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Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37585706 - 37585766
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    ||| ||||||||||||| ||||||||||    
T  37585706 ttttggtcctctaactatttaattggtattagattgatcctctaactaaaaattgatttat 37585766  T

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Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38127722 - 38127782
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| || |||  |||||| |||||||||| ||||||||||    
T  38127722 ttttggttctctaactatttaattggtttcggattggtcatctaactaaaaattgatttat 38127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49140579 - 49140520
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  49140579 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaa-attgatttat 49140520  T

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Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 39486620 - 39486569
Alignment:
Q  10 tctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||| |||| || ||| ||||||||||||| ||||||||||    
T  39486620 tctaactatttaattggtattgaattgttcctctaactaaaaattgatttat 39486569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 52178880 - 52178918
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  52178880 taactatttaatttgtatcgttttggtcctataactaaa 52178918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26723238 - 26723173
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||| |||||||||||||||||| |||||   ||| || |||||||||| |||||||||| ||||    
T  26723238 ttttgatcctctaactatttaattggtatcagattgatcatctaactaaaaattgatttattttgg 26723173  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31488457 - 31488408
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||||||||||||  ||||||||    
T  31488457 ttttggtcccttaactatttaattggtatcgatttggtcccttaactaaa 31488408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35122275 - 35122324
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  35122275 ttttggtcctttaactatttaattagtatcgctttggtcccttaactaaa 35122324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39851187 - 39851236
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  39851187 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 39851236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52179416 - 52179367
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  52179416 ttttggtcccttaactatttaattggtatcgctttggtcctttaactaaa 52179367  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 20306438 - 20306374
Alignment:
Q  2 tttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||| |||||| |||||   ||| ||||| ||||||| |||||||||| ||||    
T  20306438 tttggtcctctaactagttaattggtatcagattgatcctccaactaaagattgatttattttgg 20306374  T

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Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4155611 - 4155676
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||||| ||||    
T  4155611 ttttggtcctctaactatttaattggtatcggtttgatcctctaactaaaaattgatttattttgg 4155676  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4931710 - 4931650
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||    
T  4931710 ttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgaattat 4931650  T

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Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33716601 - 33716661
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  33716601 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 33716661  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44332956 - 44332896
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  44332956 ttttggtcctctaactatttaattggtatcaaattggtcctctaactaaaaattgatttat 44332896  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41891979 - 41892037
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgattt 59  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  41891979 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgattt 41892037  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41453018 - 41453083
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  41453018 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 41453083  T

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Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1114067 - 1114127
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  1114067 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 1114127  T

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Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6356722 - 6356662
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  6356722 ttttggtcctataactatttaattggtatcggattggtcctctaactaaaaattgatttat 6356662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6356778 - 6356838
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  6356778 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 6356838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7578885 - 7578945
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  7578885 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 7578945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8416498 - 8416558
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  8416498 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 8416558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10526324 - 10526384
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  10526324 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 10526384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10526747 - 10526687
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  10526747 tttttgtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 10526687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31638380 - 31638320
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  31638380 ttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 31638320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35146712 - 35146772
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  35146712 ttttggtcctctaactatttagttagtatcggattggtcctctaactaaaaattgatttat 35146772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41453442 - 41453382
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  41453442 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 41453382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1114482 - 1114417
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| ||  |||||  ||||||||||||||||| |||||||||| ||||    
T  1114482 ttttggtcctctaactatttagttgttatcggattggtcctctaactaaaaattgatttattttgg 1114417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8542935 - 8542870
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||| ||||||||||||| |||||||||| ||||    
T  8542935 ttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattgatttattttgg 8542870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8936862 - 8936927
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||| |||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  8936862 ttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 8936927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29276888 - 29276953
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| ||| || ||||||||||||| |||| | |||||||| ||||    
T  29276888 ttttggtcctctaactatttaattggtaacggtttggtcctctaattaaaaaatgatttattttgg 29276953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29277780 - 29277715
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||| || |||||||||||||||||| | |||||||| ||||    
T  29277780 ttttggtcctctaactatttatttggtaacggtttggtcctctaactaaaaaatgatttattttgg 29277715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 36673991 - 36674048
Alignment:
Q  4 tggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  36673991 tggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 36674048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 48626500 - 48626435
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| |||||||||| ||||    
T  48626500 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttattttgg 48626435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6356299 - 6356359
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||| |||| ||||||||||    
T  6356299 ttttggtcatctaactatttaattggtatcggattggtcctctaattaaaaattgatttat 6356359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7579309 - 7579249
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  7579309 ttttggtcttctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 7579249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16867720 - 16867780
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| ||||| |||||   ||||||||||||||||| ||||||||||    
T  16867720 ttttggtcctctaactatataattggtatcagattggtcctctaactaaaaattgatttat 16867780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19681508 - 19681568
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||| |  ||||||||||||||||| ||||||||||    
T  19681508 ttttggtcctctaactatttagttggtattggattggtcctctaactaaaaattgatttat 19681568  T

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Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21391203 - 21391263
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  21391203 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttat 21391263  T

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Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21391627 - 21391567
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||| ||||||    
T  21391627 ttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattaatttat 21391567  T

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Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31637956 - 31638016
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  31637956 ttttagtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 31638016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41192122 - 41192062
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || ||||||||| |||| ||||||||||    
T  41192122 ttttggtcctctaactatttaattggtatcggattagtcctctaagtaaaaattgatttat 41192062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43247428 - 43247488
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||||||  |||||  ||||||||||||||||| ||||||||||    
T  43247428 tttttgtcctctaactatttaattgatatcggattggtcctctaactaaaaattgatttat 43247488  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 36423801 - 36423746
Alignment:
Q  6 gtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  36423801 gtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 36423746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 41752081 - 41752027
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  41752081 tcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 41752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8417373 - 8417308
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   |||||||| |||||||| ||| |||||| ||||    
T  8417373 ttttggtcctctaactatttaattggtatcagattggtcctttaactaaaaattaatttattttgg 8417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28286130 - 28286195
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||| |||||||||||| || |||||   ||||||||||||||||| |||||||||| ||||    
T  28286130 ttttggtcttctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttgg 28286195  T

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Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 36283635 - 36283582
Alignment:
Q  9 ctctaactatttaatttgtatcg-atttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||    
T  36283635 ctctaactatttaattggtatcggatttgatcctctaactaaaaattgatttat 36283582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6357202 - 6357142
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||| |||||| || ||||||  ||||||||||||||||| ||||||||||    
T  6357202 ttttgatcctctaattatttagttagtatcggattggtcctctaactaaaaattgatttat 6357142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8542512 - 8542572
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||| |||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  8542512 ttttcgtcttctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 8542572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17363673 - 17363613
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| |||| |  || |||||||||||||| ||||||||||    
T  17363673 ttttggttctctaactatttaattggtattggatttgtcctctaactaaaaattgatttat 17363613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19681932 - 19681872
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||| ||||||||||| |||||   || |||||||||||||| ||||||||||    
T  19681932 ttttggtcctctgactatttaattggtatcagattagtcctctaactaaaaattgatttat 19681872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31075630 - 31075570
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||| |  ||||||||| || |||| ||||||||||    
T  31075630 ttttggtcctctaactatttaattggtattggattggtcctccaattaaaaattgatttat 31075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35147126 - 35147066
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||| |  || ||||||||||||||  |||||||||    
T  35147126 ttttggtcctctaactatttaattggtattggattagtcctctaactaaaatttgatttat 35147066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36282799 - 36282859
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||   |||||||| |||||||| ||||||||||    
T  36282799 ttttagtcctctaactatttaattggtatcagattggtcctttaactaaaaattgatttat 36282859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 48626076 - 48626136
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||| ||||||||||| ||||||||||    
T  48626076 ttttggtcctctaactatttagttggtatcagattggttctctaactaaaaattgatttat 48626136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 7909597 - 7909543
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||  ||| |  ||||||||||||||||| ||||||||||    
T  7909597 tcctctaactatttaattgatattggattggtcctctaactaaaaattgatttat 7909543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28263520 - 28263574
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  28263520 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattttgg 28263574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8937286 - 8937226
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatc-gatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||| ||||  |||||||||    
T  8937286 ttttggtcctctaactatttaattagtatcagattt-gtcctctaattaaaagttgatttat 8937226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 17359205 - 17359254
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  17359205 taactatttaattggtattggattggtcctctaactaaaaattgatttat 17359254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28286554 - 28286497
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatt 58  Q
    |||||||||||||||| ||||||| ||||||  || ||||| |||||||| |||||||    
T  28286554 ttttggtcctctaactttttaattggtatcggattagtcctttaactaaaaattgatt 28286497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17749948 - 17750008
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||  ||||   ||||| ||||||||||| ||| ||||||    
T  17749948 ttttggtcctctaactatttaattgatatcagattggttctctaactaaaaattaatttat 17750008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 28297840 - 28297892
Alignment:
Q  9 ctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  28297840 ctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 28297892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34037348 - 34037288
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    || ||||||| |||||| ||||||||||    
T  34037348 ttttggtcctctaactatttaattggtatatgattagtcctctgactaaaaattgatttat 34037288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38677115 - 38677055
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||  ||||||||||||| || ||| ||||||||  ||||||||| |||||||||    
T  38677115 ttttggtcccttaactatttaattggtttcggtttggtcccttaactaaattttgatttat 38677055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8865 - 8805
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  8865 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22590 - 22530
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  22590 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 22530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21525 - 21585
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  21525 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttat 21585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15405769 - 15405829
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  15405769 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 15405829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17032606 - 17032666
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  17032606 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 17032666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12860393 - 12860458
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  12860393 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 12860458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16305037 - 16305098
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcg-atttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  16305037 tttttgtcctctaactatttaattggtatcggatttggtcctctaactaaaaattgatttat 16305098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7495993 - 7496053
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  7495993 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 7496053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8962373 - 8962433
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  8962373 ttttggtcctctaactatttaattagtatcagattggtcctctaactaaaaattgatttat 8962433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13193001 - 13193061
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  13193001 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 13193061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15744470 - 15744530
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  15744470 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 15744530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16305462 - 16305402
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  16305462 ttttgatcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttat 16305402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17050942 - 17051002
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  17050942 ttttggtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 17051002  T

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Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24138081 - 24138141
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  24138081 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 24138141  T

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Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30898738 - 30898678
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  30898738 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 30898678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34735356 - 34735416
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||||||| ||||||||||    
T  34735356 ttttggtcctctaactatttagttggtatcgaattgatcctctaactaaaaattgatttat 34735416  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34735780 - 34735720
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  34735780 ttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttat 34735720  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38333117 - 38333057
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||    
T  38333117 ttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttat 38333057  T

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Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8963254 - 8963189
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||| |||||||||||||||| ||||||  ||||| ||||||||||| |||||||||| ||||    
T  8963254 ttttggttctctaactatttaattggtatcggattggttctctaactaaaaattgatttattttgg 8963189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15744884 - 15744819
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| |||||||||| ||||    
T  15744884 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttgg 15744819  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24372404 - 24372339
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   || |||||||||||||| |||||||||| ||||    
T  24372404 ttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttattttgg 24372339  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29472255 - 29472320
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| || ||||||| ||||    
T  29472255 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaatagatttattttgg 29472320  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7496416 - 7496356
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  7496416 ttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 7496356  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8173898 - 8173958
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||  ||||   ||||||||||||||||| ||||||||||    
T  8173898 ttttggtcctctaactatttaattgatatcagattggtcctctaactaaaaattgatttat 8173958  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8174322 - 8174262
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||| ||| ||||||    
T  8174322 ttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattaatttat 8174262  T

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Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10991864 - 10991924
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||||||    
T  10991864 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttat 10991924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13193425 - 13193365
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| |||||   ||| ||||||||||||| ||||||||||    
T  13193425 ttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttat 13193365  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15406193 - 15406133
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  15406193 tttttgtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttat 15406133  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 17052490 - 17052426
Alignment:
Q  2 tttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||||| ||||    ||||||||||||||||| |||||||||| ||||    
T  17052490 tttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttattttgg 17052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19815717 - 19815777
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||| ||||||||||| ||||||||||    
T  19815717 ttttggtcctctaactatttagttggtatcggattggttctctaactaaaaattgatttat 19815777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19816141 - 19816081
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||| |||||||||||| ||||||  || |||||||||||||| ||||||||||    
T  19816141 ttttggtcctcaaactatttaattggtatcggattagtcctctaactaaaaattgatttat 19816081  T

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Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24371980 - 24372040
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  24371980 ttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 24372040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36714022 - 36713962
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| |||| || ||||||||| ||||||| ||||||||||    
T  36714022 ttttggttctctaactatttaattggtattgaattggtcctcaaactaaaaattgatttat 36713962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41474519 - 41474459
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  || |||||||||||||| ||||||||||    
T  41474519 ttttggtcctctaattatttaattggtatcggattagtcctctaactaaaaattgatttat 41474459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2147898 - 2147947
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||||||||||||||||| |||||   |||||||||||||||||    
T  2147898 ttttggtcctctaactatttaattagtatcagattggtcctctaactaaa 2147947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29472679 - 29472614
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||||||||||||||| |||| |  ||| ||||||||| ||| |||||||||| ||||    
T  29472679 ttttggtcctctaactatttaattggtattggattgatcctctaacaaaaaattgatttattttgg 29472614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7469179 - 7469239
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||| ||||||||||||||||| |||||   || |||||||||||||| ||||||||||    
T  7469179 ttttggccctctaactatttaattggtatcagattagtcctctaactaaaaattgatttat 7469239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26181713 - 26181773
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| | || |  ||||||| ||||||||| ||||||||||    
T  26181713 ttttggtcctctaactatttaattggaattggattggtccactaactaaaaattgatttat 26181773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26182137 - 26182077
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||| ||| |||||||||  |||||  ||||||||||||||||| ||||||||||    
T  26182137 ttttggtcctttaattatttaattgatatcggattggtcctctaactaaaaattgatttat 26182077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36713601 - 36713661
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||||| ||||||  ||| || |||||||||| ||||||||||    
T  36713601 ttttgatcctctaactatttaattggtatcggattgatcttctaactaaaaattgatttat 36713661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38332717 - 38332777
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| |||||||||||||||| |||| |  ||| ||||||||||||| ||||||||||    
T  38332717 ttttggttctctaactatttaattggtattggattgatcctctaactaaaaattgatttat 38332777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 2148312 - 2148258
Alignment:
Q  12 taactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||| ||||||  ||| ||||||||||||| |||||||||| ||||    
T  2148312 taactatttaattggtatcggattgatcctctaactaaaaattgatttattttgg 2148258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2805020 - 2804971
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| |||| |||| ||||||||    
T  2805020 ttttggtcctttaactatttaattggtatcgctttgatcctttaactaaa 2804971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13479477 - 13479428
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  13479477 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 13479428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15044752 - 15044801
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  15044752 ttttggtcccttaactatttaattggtatcgctttggtcctttaactaaa 15044801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 23992267 - 23992214
Alignment:
Q  13 aactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  23992267 aactatttaattagtatcggtttggtcccctaactaaaatttgatttattttgg 23992214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33200041 - 33200090
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  33200041 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 33200090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38807230 - 38807181
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaa 50  Q
    |||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  38807230 ttttggtcctttaactatttaattggtatcgctttggtcccttaactaaa 38807181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7469595 - 7469535
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||| ||||||||||||| || |||||   ||||| ||||||||||| ||||||||||    
T  7469595 ttttggttctctaactatttagttggtatcagattggttctctaactaaaaattgatttat 7469535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19847755 - 19847695
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| |||||||||||| || |||| |  ||||||||||||||||| ||| ||||||    
T  19847755 ttttggtcatctaactatttagttggtattggattggtcctctaactaaaaattaatttat 19847695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33470360 - 33470300
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||||   ||| |||||| |||||| ||||||||||    
T  33470360 ttttggtcctctaactatttagttggtatcagattgatcctctgactaaaaattgatttat 33470300  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 73198 - 73133
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  73198 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 73133  T

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Target: scaffold0029; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 72775 - 72835
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  72775 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 72835  T

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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24175 - 24235
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||| || ||||||||||||||||| ||||||||||    
T  24175 ttttggtcctctaactatttagttggtattgaattggtcctctaactaaaaattgatttat 24235  T

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Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24599 - 24534
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    ||||||| ||||||||||||| || ||||||  ||||||||||||||||| |||||||||| ||||    
T  24599 ttttggtactctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgg 24534  T

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Target: scaffold0134 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 14149 - 14208
Alignment:
Q  2 tttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||| |||||   ||||||||||||||||| ||||||||||    
T  14149 tttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttat 14208  T

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Target: scaffold0134; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14572 - 14512
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||||||  |||||  ||| ||||||||||||| ||||||||||    
T  14572 ttttggtcctctaactatttaattgatatcggattgatcctctaactaaaaattgatttat 14512  T

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Target: scaffold0340 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18710 - 18645
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||| ||| ||||||||| ||||||  ||||||||||||||||| |||||||||| ||||    
T  18710 ttttggtcctttaattatttaattggtatcggattggtcctctaactaaaaattgatttattttgg 18645  T

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Target: scaffold0340; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18286 - 18346
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||||||| ||||    ||||||||||||||||| ||||||||||    
T  18286 ttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttat 18346  T

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Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20145 - 20088
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatt 58  Q
    ||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||    
T  20145 ttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatt 20088  T

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Target: scaffold0182; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19721 - 19781
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||||||||||| || |||| |  || |||||||||||||| ||||||||||    
T  19721 ttttggtcctctaactatttagttggtattggattagtcctctaactaaaaattgatttat 19781  T

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Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20764 - 20824
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||| |||||||||||| || ||||||  ||||||||||||||||| ||||||||||    
T  20764 ttttggtcatctaactatttagttggtatcggattggtcctctaactaaaaattgatttat 20824  T

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Target: scaffold0037 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45769 - 45829
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||| ||||||||| ||||||  || |||||||||||||| ||||||||||    
T  45769 ttttggtcctctaattatttaattggtatcggattagtcctctaactaaaaattgatttat 45829  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50489 - 50549
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||||||| |||||||||| |||||   ||||||||||||||||| ||||||||||    
T  50489 ttttggtcctctacctatttaattggtatctgattggtcctctaactaaaaattgatttat 50549  T

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Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50914 - 50853
Alignment:
Q  1 ttttggtcctctaactattt-aatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||||| |||| |||||   ||| ||||||||||||| ||||||||||    
T  50914 ttttggtcctctaactattttaattggtatcagattgatcctctaactaaaaattgatttat 50853  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 113406 - 113466
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||| ||||||| |||||   ||||||||||||||||| ||||||||||    
T  113406 ttttggtcctctaactgtttaattggtatccgattggtcctctaactaaaaattgatttat 113466  T

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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 349509 - 349449
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||||||| ||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  349509 ttttggtcccctaactatttagttggtatcagattggtcctctaactaaaaattgatttat 349449  T

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Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 349086 - 349146
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| ||||||||||||||||||| ||||    || |||||||||||||| ||||||||||    
T  349086 tttttgtcctctaactatttaattagtattagattagtcctctaactaaaaattgatttat 349146  T

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Target: scaffold0225 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9795 - 9860
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||| |||||||||||||  ||||||||| ||||    
T  9795 ttttggtcccttaactatttaattggtatcggtttgctcctctaactaaaatttgatttattttgg 9860  T

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Target: scaffold0225; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10993 - 10928
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttatcttgg 66  Q
    |||||||||  ||||||||||||| |||||| |||||||| |||||||||  ||||||||| ||||    
T  10993 ttttggtcccttaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttgg 10928  T

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Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15885 - 15825
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| |||||||||||||||| | ||||||  |||||| |||||||||| ||||||||||    
T  15885 ttttgatcctctaactatttaactggtatcggattggtcatctaactaaaaattgatttat 15825  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 81871 - 81931
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    ||||| ||||||||||||||| || |||||   ||||||||||||||||| ||||||||||    
T  81871 ttttgatcctctaactatttatttggtatcagattggtcctctaactaaaaattgatttat 81931  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 90875 - 90815
Alignment:
Q  1 ttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||| |||||||||||||||| || ||||||  || |||||||||||||| ||||||||||    
T  90875 ttttcgtcctctaactatttagttggtatcggattagtcctctaactaaaaattgatttat 90815  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 144039 - 144093
Alignment:
Q  7 tcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttat 61  Q
    |||||||||||||||||| |||||   ||||| ||||||||||| ||||||||||    
T  144039 tcctctaactatttaattggtatcatattggttctctaactaaaaattgatttat 144093  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 6426 - 6374
Alignment:
Q  6 gtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatt 58  Q
    ||||| |||||| |||||| ||||||  ||||||||||||||||| |||||||    
T  6426 gtcctttaactaattaattggtatcgtattggtcctctaactaaaaattgatt 6374  T

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