View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20923_low_9 (Length: 210)
Name: NF20923_low_9
Description: NF20923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20923_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 2587879 - 2587698
Alignment:
| Q |
17 |
aaaaatcagttcgttgtattatgatttaagcaagctcaaactactaattattttgacttgattgttgtcttcatttaattaagaaggaataatttcatta |
116 |
Q |
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| T |
2587879 |
aaaaatcagttcgttgtattatgatttaagcaagctcaaactactaattattttgacttgattgttgtcttcatttaattaagaaggaataatttcatta |
2587780 |
T |
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| Q |
117 |
atgttgttgtcataacgtgtattatagttaatgccttatatatgacctgtaaatttaatttaattggttgattacacaggtt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2587779 |
atgttgttgtcataacgtgtattatagttaatgccttatatatgacctgtaaatttaatttaattggttgattacacaggtt |
2587698 |
T |
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