View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20924_low_13 (Length: 305)

Name: NF20924_low_13
Description: NF20924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20924_low_13
NF20924_low_13
[»] chr8 (31 HSPs)
chr8 (1-215)||(9244086-9244300)
chr8 (3-196)||(30640821-30641013)
chr8 (1-215)||(26364762-26364973)
chr8 (3-196)||(9245333-9245526)
chr8 (1-215)||(521983-522194)
chr8 (1-215)||(30644591-30644801)
chr8 (6-196)||(41636857-41637047)
chr8 (1-196)||(20308944-20309139)
chr8 (1-196)||(21095577-21095772)
chr8 (2-190)||(34642687-34642874)
chr8 (1-193)||(20309956-20310149)
chr8 (1-193)||(21096589-21096782)
chr8 (3-196)||(43584431-43584624)
chr8 (3-196)||(26366096-26366289)
chr8 (1-181)||(41638070-41638249)
chr8 (1-215)||(34643848-34644056)
chr8 (1-194)||(43585849-43586041)
chr8 (1-82)||(31202987-31203068)
chr8 (1-68)||(3714550-3714617)
chr8 (3-68)||(43134079-43134144)
chr8 (117-196)||(22012274-22012353)
chr8 (136-191)||(31203071-31203126)
chr8 (117-196)||(22013161-22013240)
chr8 (123-194)||(3714443-3714514)
chr8 (8-68)||(3713090-3713149)
chr8 (123-194)||(3713185-3713256)
chr8 (58-92)||(522163-522197)
chr8 (152-190)||(43133976-43134014)
chr8 (115-184)||(20066208-20066277)
chr8 (58-90)||(9244083-9244115)
chr8 (58-90)||(26364759-26364791)
[»] chr7 (64 HSPs)
chr7 (1-215)||(29186685-29186899)
chr7 (1-196)||(19217648-19217843)
chr7 (1-196)||(43113695-43113890)
chr7 (1-215)||(18788443-18788657)
chr7 (1-226)||(9391540-9391765)
chr7 (1-197)||(3537447-3537642)
chr7 (3-196)||(29187932-29188125)
chr7 (1-196)||(44417478-44417673)
chr7 (1-196)||(48793418-48793613)
chr7 (3-196)||(13597167-13597359)
chr7 (1-198)||(48792464-48792661)
chr7 (1-190)||(27072562-27072751)
chr7 (1-190)||(27205562-27205751)
chr7 (3-196)||(44420425-44420617)
chr7 (1-225)||(43962442-43962666)
chr7 (1-196)||(13750538-13750733)
chr7 (1-190)||(7011654-7011844)
chr7 (1-190)||(7027012-7027202)
chr7 (3-196)||(9392717-9392910)
chr7 (58-245)||(13749081-13749266)
chr7 (1-196)||(18787169-18787364)
chr7 (1-196)||(45399912-45400107)
chr7 (1-189)||(32519658-32519846)
chr7 (1-194)||(37237132-37237322)
chr7 (1-184)||(32518442-32518616)
chr7 (47-215)||(43961000-43961165)
chr7 (58-194)||(26005429-26005565)
chr7 (2-185)||(44746748-44746931)
chr7 (1-193)||(3538478-3538660)
chr7 (8-178)||(44230455-44230625)
chr7 (58-196)||(44748465-44748603)
chr7 (1-215)||(12630584-12630799)
chr7 (61-215)||(43114970-43115124)
chr7 (63-196)||(13599159-13599293)
chr7 (1-108)||(37235834-37235941)
chr7 (1-73)||(45688888-45688960)
chr7 (3-90)||(12630526-12630613)
chr7 (155-215)||(9357679-9357739)
chr7 (114-194)||(45398657-45398737)
chr7 (102-185)||(19218897-19218980)
chr7 (1-68)||(26006773-26006840)
chr7 (3-57)||(42611458-42611512)
chr7 (3-68)||(27071043-27071108)
chr7 (3-68)||(27207205-27207270)
chr7 (1-68)||(7057359-7057426)
chr7 (152-194)||(44231765-44231807)
chr7 (1-70)||(19008952-19009021)
chr7 (1-70)||(19016725-19016794)
chr7 (135-190)||(37235939-37235994)
chr7 (1-48)||(44231892-44231939)
chr7 (157-194)||(45689023-45689060)
chr7 (58-92)||(44417475-44417509)
chr7 (58-90)||(3537444-3537476)
chr7 (58-90)||(3538631-3538663)
chr7 (58-90)||(7057397-7057429)
chr7 (58-90)||(9391537-9391569)
chr7 (58-90)||(19217645-19217677)
chr7 (58-90)||(29186682-29186714)
chr7 (58-90)||(43113692-43113724)
chr7 (58-90)||(43960963-43960995)
chr7 (58-90)||(43962637-43962669)
chr7 (58-90)||(44231910-44231942)
chr7 (58-90)||(45688885-45688917)
chr7 (58-90)||(48792461-48792493)
[»] chr1 (34 HSPs)
chr1 (1-196)||(51693168-51693363)
chr1 (1-197)||(52086648-52086842)
chr1 (1-196)||(7111377-7111572)
chr1 (1-215)||(17244196-17244410)
chr1 (1-185)||(5488780-5488964)
chr1 (1-215)||(51468360-51468574)
chr1 (1-196)||(7110247-7110442)
chr1 (3-215)||(45228298-45228510)
chr1 (1-181)||(50484913-50485093)
chr1 (1-196)||(51468803-51468998)
chr1 (2-193)||(52087679-52087870)
chr1 (1-215)||(52759384-52759598)
chr1 (1-193)||(45229508-45229700)
chr1 (1-215)||(38235033-38235246)
chr1 (1-181)||(5488522-5488702)
chr1 (6-178)||(40187629-40187800)
chr1 (1-178)||(18819283-18819460)
chr1 (61-192)||(52761502-52761633)
chr1 (1-185)||(1821929-1822114)
chr1 (2-194)||(47533758-47533950)
chr1 (3-196)||(50483533-50483726)
chr1 (1-174)||(47532978-47533150)
chr1 (1-179)||(1823215-1823389)
chr1 (1-142)||(17245621-17245761)
chr1 (93-215)||(21203124-21203246)
chr1 (1-75)||(25181522-25181596)
chr1 (92-147)||(49784941-49784996)
chr1 (1-48)||(18820806-18820853)
chr1 (102-184)||(51088653-51088735)
chr1 (117-194)||(18820679-18820756)
chr1 (58-90)||(18820824-18820856)
chr1 (58-90)||(25181519-25181551)
chr1 (58-90)||(51693165-51693197)
chr1 (58-90)||(52086645-52086677)
[»] chr4 (43 HSPs)
chr4 (1-196)||(7261445-7261640)
chr4 (1-196)||(10802910-10803105)
chr4 (1-215)||(22621888-22622099)
chr4 (1-196)||(34095561-34095756)
chr4 (1-196)||(38032322-38032517)
chr4 (1-215)||(17356382-17356596)
chr4 (3-196)||(8815259-8815452)
chr4 (1-196)||(38031189-38031384)
chr4 (1-194)||(10804099-10804292)
chr4 (1-245)||(56233745-56233973)
chr4 (15-215)||(22623029-22623226)
chr4 (3-196)||(23757872-23758066)
chr4 (1-215)||(18091601-18091815)
chr4 (1-186)||(8814156-8814340)
chr4 (1-190)||(48499385-48499573)
chr4 (3-215)||(5433293-5433502)
chr4 (1-185)||(35191838-35192019)
chr4 (3-196)||(48501226-48501418)
chr4 (1-183)||(17357778-17357960)
chr4 (1-196)||(56234923-56235117)
chr4 (1-148)||(35193146-35193293)
chr4 (1-215)||(36074677-36074891)
chr4 (93-225)||(35925804-35925936)
chr4 (92-196)||(35927018-35927122)
chr4 (1-76)||(48081552-48081627)
chr4 (1-90)||(48081598-48081687)
chr4 (1-73)||(34122827-34122899)
chr4 (1-68)||(48463014-48463081)
chr4 (2-82)||(48080292-48080372)
chr4 (117-197)||(48081281-48081361)
chr4 (129-196)||(48081469-48081536)
chr4 (1-68)||(34121320-34121387)
chr4 (123-194)||(34122725-34122796)
chr4 (110-194)||(48462907-48462991)
chr4 (114-185)||(17522475-17522546)
chr4 (58-92)||(17357929-17357963)
chr4 (101-194)||(21570330-21570423)
chr4 (58-91)||(35191835-35191868)
chr4 (58-90)||(10804263-10804295)
chr4 (58-90)||(22621885-22621917)
chr4 (58-90)||(34122870-34122902)
chr4 (58-90)||(48463052-48463084)
chr4 (58-90)||(56233742-56233774)
[»] chr6 (24 HSPs)
chr6 (4-196)||(32713785-32713977)
chr6 (1-196)||(32348939-32349134)
chr6 (1-193)||(11801247-11801439)
chr6 (5-215)||(34996647-34996854)
chr6 (1-215)||(32712376-32712587)
chr6 (1-196)||(3000695-3000890)
chr6 (1-196)||(32347829-32348024)
chr6 (3-196)||(18572908-18573100)
chr6 (3-215)||(34995375-34995586)
chr6 (1-196)||(19383057-19383244)
chr6 (1-146)||(29479146-29479291)
chr6 (92-190)||(21094517-21094615)
chr6 (92-186)||(27719848-27719941)
chr6 (1-90)||(18574301-18574390)
chr6 (129-196)||(21095281-21095348)
chr6 (140-240)||(18574165-18574271)
chr6 (92-181)||(7628436-7628526)
chr6 (152-194)||(29477912-29477954)
chr6 (1-60)||(19788268-19788327)
chr6 (1-48)||(29477780-29477827)
chr6 (1-54)||(25138815-25138868)
chr6 (58-90)||(3000861-3000893)
chr6 (101-185)||(18230452-18230536)
chr6 (58-90)||(29477777-29477809)
[»] chr3 (75 HSPs)
chr3 (1-196)||(28777589-28777784)
chr3 (1-196)||(31937056-31937251)
chr3 (1-196)||(17116223-17116417)
chr3 (1-196)||(46903526-46903721)
chr3 (1-194)||(21729092-21729285)
chr3 (1-196)||(46902352-46902547)
chr3 (1-196)||(47431089-47431284)
chr3 (1-226)||(2233177-2233402)
chr3 (3-196)||(23073276-23073469)
chr3 (1-190)||(31938216-31938404)
chr3 (1-196)||(43393955-43394151)
chr3 (1-196)||(55209803-55209997)
chr3 (1-215)||(35759114-35759328)
chr3 (1-215)||(52521948-52522161)
chr3 (3-196)||(28776471-28776664)
chr3 (3-196)||(37609344-37609537)
chr3 (4-197)||(21727934-21728127)
chr3 (1-179)||(17742211-17742390)
chr3 (1-179)||(19043531-19043710)
chr3 (1-196)||(5689746-5689935)
chr3 (1-193)||(10979080-10979272)
chr3 (1-197)||(52525261-52525456)
chr3 (41-196)||(17740891-17741046)
chr3 (41-196)||(19042211-19042366)
chr3 (1-184)||(53180718-53180900)
chr3 (1-193)||(2232623-2232815)
chr3 (1-179)||(5691014-5691191)
chr3 (1-181)||(54354308-54354488)
chr3 (3-178)||(54353046-54353221)
chr3 (63-213)||(37610648-37610798)
chr3 (1-196)||(47429648-47429838)
chr3 (1-194)||(11346833-11347026)
chr3 (1-196)||(11348374-11348568)
chr3 (1-194)||(50881020-50881206)
chr3 (1-188)||(53765876-53766063)
chr3 (2-196)||(47917515-47917708)
chr3 (58-196)||(35758082-35758220)
chr3 (61-196)||(55210810-55210945)
chr3 (68-197)||(10978093-10978221)
chr3 (1-148)||(46986043-46986187)
chr3 (3-121)||(53764452-53764569)
chr3 (3-111)||(23091214-23091322)
chr3 (1-194)||(15290394-15290586)
chr3 (75-215)||(50879782-50879922)
chr3 (1-112)||(53178722-53178833)
chr3 (1-90)||(43392647-43392736)
chr3 (105-196)||(33111747-33111837)
chr3 (1-80)||(50879515-50879594)
chr3 (1-112)||(17117387-17117496)
chr3 (39-110)||(33113306-33113378)
chr3 (16-90)||(23072096-23072169)
chr3 (1-68)||(34014529-34014596)
chr3 (140-215)||(43392766-43392841)
chr3 (3-68)||(24376458-24376523)
chr3 (3-68)||(27750461-27750526)
chr3 (126-190)||(53764896-53764959)
chr3 (155-193)||(53101697-53101735)
chr3 (152-215)||(23072211-23072274)
chr3 (58-92)||(53766032-53766066)
chr3 (58-92)||(55209800-55209834)
chr3 (58-90)||(10979243-10979275)
chr3 (58-90)||(11348539-11348571)
chr3 (58-90)||(17117467-17117499)
chr3 (1-33)||(23072140-23072172)
chr3 (1-73)||(27749127-27749199)
chr3 (58-90)||(31937053-31937085)
chr3 (58-90)||(31938375-31938407)
chr3 (58-90)||(34014526-34014558)
chr3 (1-37)||(34015829-34015865)
chr3 (58-90)||(43392644-43392676)
chr3 (58-90)||(43394122-43394154)
chr3 (58-90)||(46902349-46902381)
chr3 (58-90)||(46903692-46903724)
chr3 (58-90)||(47429645-47429677)
chr3 (58-90)||(52525427-52525459)
[»] chr5 (26 HSPs)
chr5 (1-196)||(19228859-19229054)
chr5 (1-196)||(19229975-19230170)
chr5 (1-215)||(12372335-12372549)
chr5 (3-196)||(39349503-39349696)
chr5 (1-190)||(39350553-39350742)
chr5 (10-178)||(9083216-9083384)
chr5 (1-196)||(13278133-13278328)
chr5 (1-183)||(18654317-18654500)
chr5 (1-182)||(9082000-9082181)
chr5 (15-215)||(39164091-39164288)
chr5 (1-184)||(18655566-18655749)
chr5 (1-215)||(6803508-6803721)
chr5 (3-215)||(12373603-12373816)
chr5 (1-195)||(13276840-13277026)
chr5 (62-196)||(4031903-4032039)
chr5 (63-196)||(4032927-4033060)
chr5 (1-88)||(8447098-8447185)
chr5 (1-81)||(6801995-6802075)
chr5 (3-70)||(35952464-35952531)
chr5 (84-194)||(42962122-42962232)
chr5 (62-150)||(3944662-3944750)
chr5 (116-215)||(14356562-14356662)
chr5 (1-32)||(12373727-12373758)
chr5 (102-185)||(30674746-30674829)
chr5 (58-90)||(8447095-8447127)
chr5 (58-90)||(13276837-13276869)
[»] chr2 (22 HSPs)
chr2 (1-196)||(16602746-16602941)
chr2 (1-215)||(27892219-27892433)
chr2 (1-196)||(38243857-38244052)
chr2 (1-178)||(23832989-23833165)
chr2 (1-196)||(27891127-27891322)
chr2 (2-157)||(26388240-26388395)
chr2 (40-198)||(38242943-38243098)
chr2 (1-90)||(16604197-16604286)
chr2 (1-88)||(43814542-43814629)
chr2 (1-70)||(23833898-23833967)
chr2 (3-68)||(5033501-5033566)
chr2 (103-194)||(370885-370976)
chr2 (3-68)||(5034846-5034911)
chr2 (18-68)||(15496083-15496133)
chr2 (92-181)||(44800984-44801073)
chr2 (152-194)||(5033631-5033673)
chr2 (1-65)||(19577359-19577423)
chr2 (152-215)||(16604092-16604155)
chr2 (58-90)||(16604257-16604289)
chr2 (58-90)||(23832986-23833018)
chr2 (58-90)||(27891124-27891156)
chr2 (58-90)||(27892404-27892436)
[»] scaffold0141 (4 HSPs)
scaffold0141 (1-181)||(35202-35382)
scaffold0141 (1-181)||(31054-31234)
scaffold0141 (58-90)||(31051-31083)
scaffold0141 (58-90)||(35353-35385)
[»] scaffold0049 (4 HSPs)
scaffold0049 (1-181)||(79430-79610)
scaffold0049 (1-181)||(83578-83758)
scaffold0049 (58-90)||(79427-79459)
scaffold0049 (58-90)||(83729-83761)
[»] scaffold0878 (3 HSPs)
scaffold0878 (1-190)||(2934-3124)
scaffold0878 (58-215)||(1847-2003)
scaffold0878 (58-90)||(3095-3127)
[»] scaffold1425 (3 HSPs)
scaffold1425 (1-196)||(1503-1698)
scaffold1425 (1-190)||(155-343)
scaffold1425 (58-92)||(1667-1701)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-190)||(25252-25442)
[»] scaffold0349 (1 HSPs)
scaffold0349 (92-186)||(9270-9363)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-82)||(104322-104403)
scaffold0026 (134-215)||(104405-104486)
scaffold0026 (58-90)||(104319-104351)
[»] scaffold0035 (1 HSPs)
scaffold0035 (102-215)||(22351-22465)
[»] scaffold0081 (1 HSPs)
scaffold0081 (102-185)||(42923-43003)


Alignment Details
Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 9244086 - 9244300
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  9244086 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttattttattcaatttggttcaattttga 9244185  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||  |    
T  9244186 taattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttcttctttttc 9244285  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  9244286 ttccctcatcttcat 9244300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 30640821 - 30641013
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||  |||||||||||||||||||| ||||| | ||||||| |||    
T  30640821 ttaacttatttcttttattcaatttggtcccataagttttaaccttatcaaacacgtca-ttaacttatttcttttattcaatttgatccaattttaata 30640919  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30640920 attttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttatttactttcttctt 30641013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 26364762 - 26364973
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| ||| |||||||||||||||||||| ||||| | |||||||||    
T  26364762 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcctttaacttatttcttttattcaatttgatccaattttga 26364861  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||   |    
T  26364862 taattttaatcctctaaaaaaagagaccgttggattacagaggtctatcagattttataatgtatcaccaacacctaatttatttagtttcttctt---c 26364958  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  26364959 ttccctcatcttcat 26364973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 9245526 - 9245333
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||| |||| || ||||||| |||    
T  9245526 ttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaatttttata 9245427  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| |||||||||||||| | ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  9245426 attttaatcccctaaaaaaagagaccgttggattgctgaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttctt 9245333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 522194 - 521983
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| |||||||| ||||| |  ||||||||    
T  522194 ccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacatgtcccttaacttatttattttattcaatttgatctaattttga 522095  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||   |    
T  522094 taattttaatcccctagaaaaagagactgttggattacggaggtctatcaaattttatagtgtatcaccaacccctaatttatttactttcttctt---c 521998  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  521997 ttccctcatcttcat 521983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 30644801 - 30644591
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||    
T  30644801 ccttaatttatttcttttatttaatttggtcccataaatcttaactttctcaaacacgtctcttaacttatttcttttattcaatttgatccaattttga 30644702  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| ||| |||||   |    
T  30644701 taattttaatcctctaaaaaa-gagaccgttggattacggaggtctatcaaattttataatggatcaccaacacctaatttatttagttttttctt---c 30644606  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  30644605 ttccctcatcttcat 30644591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 196
Target Start/End: Original strand, 41636857 - 41637047
Alignment:
Q  6 acttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataatt 105  Q
    |||||||| ||| ||||||||||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||||    
T  41636857 acttatttctttcattcaatttggtcccataagtcttaactttctaaaacacgtcccttaatttatttcttttattcaatttggtccaacttttataatt 41636956  T
Q  106 ttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||| |||||||| ||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  41636957 ttaatcccctaaaaaaagagaccgttggattacggaagtctatcagattttatcgtgtatcaccaacacctaatttatttactttcttctt 41637047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20308944 - 20309139
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||| |||||  |||||||| ||||||| |||||||||    
T  20308944 ccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttttattcaatttggtccaattttga 20309043  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||| |||| ||| |||| ||||||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  20309044 taattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaatttatttactttcttctt 20309139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21095577 - 21095772
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||| |||||  |||||||| ||||||| |||||||||    
T  21095577 ccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttttattcaatttggtccaattttga 21095676  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||| |||| ||| |||| ||||||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  21095677 taattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaatttatttactttcttctt 21095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 34642687 - 34642874
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgat 101  Q
    |||||||||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  34642687 cttaacttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtttaattttgat 34642786  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||||||| ||||||||  | ||||||||||| ||||||||||| | |||||||||| ||||||||||| ||||||||||||||||    
T  34642787 aattttaatcccctaaaaaa-aaaaccgttggattgcggaggtctatcagattttatagtatatcaccaacatctaatttatttacttt 34642874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 20310149 - 20309956
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||| ||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20310149 ccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaattttga 20310050  T
Q  101 taattttaatcctcta-aaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    ||||||||||||  || |||||  |||||||||||||| | |||||| | | |||||||||||||||||| |||||||| ||||||||||||||    
T  20310049 taattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttactttctt 20309956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 21096782 - 21096589
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||| ||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21096782 ccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaattttga 21096683  T
Q  101 taattttaatcctcta-aaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    ||||||||||||  || |||||  |||||||||||||| | |||||| | | |||||||||||||||||| |||||||| ||||||||||||||    
T  21096682 taattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttactttctt 21096589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 43584431 - 43584624
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||    
T  43584431 ttaacttatttcttttattcaatttgatctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttgata 43584530  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||| | ||||||| ||||||||||||||||  | |||||| | |||||||| |||||||||||   ||||||||||||||||||||||    
T  43584531 attttaatcttttaaaaaaagagaccgttggattacaaaagtctatcagattttataatgtatcaccaatgtctaatttatttactttcttctt 43584624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 26366289 - 26366096
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||| ||||||||  ||||| | ||||| || ||||||| || || ||||||||||||||||||| ||||||| || |||| |||    
T  26366289 ttaacttatttcttttatttaatttggtttcataagtcttaaccttatcaaacatgttccataacttatttcttttattcaatttggtccatttttaata 26366190  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| ||||||||  |||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  26366189 attttaatcccctaaaaaaaaagaccgttagattacggaggtctattagattttatagtgtatcaccaacacataatttatttactttcttctt 26366096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 41638249 - 41638070
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||  || ||||| | |||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||| |    
T  41638249 ccttaacttatttcttttattcaatttattctcataagtcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtccaattttaa 41638150  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||||| |||||||| |||||  ||||||||| ||||||||| |  |||||||||||||||||||||||||||||    
T  41638149 taattttaatcccctaaaaaa-gagacaattggattacagaggtctatcatgttttatagtgtatcaccaacacctaattt 41638070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 34644056 - 34643848
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||| |||||||| |||||||||||||| |||||||| | ||||||||||||||||| ||  |||| ||||||||||||||  |||| ||||||||||||    
T  34644056 ccttgacttatttcttttattcaatttg-tcccataaatcttaactttctcaaacacctctattaatttatttcttttatttaatttagttcaattttga 34643958  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| ||||||||  |||||||||||||   ||||||||| | ||||||| | ||||||||||||||||||||||||   ||||||||   |    
T  34643957 taattttaatcccctaaaaaa--agaccgttggatt---gaggtctatcagattttatggcgtatcaccaacacctaatttatttggattcttcttcttc 34643863  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  34643862 ttccctcatcttcat 34643848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 43586041 - 43585849
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||| |||||| || ||||| | |||| ||||||||||| |||  |||| ||||||| ||||||| ||||| | ||||||| |    
T  43586041 ccttaacttatttcttttatttaatttgatctcataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaa 43585942  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||||||||| |||||||  ||||| |||||||| | |||||||  | |||||||||||||||| ||| |||||||||||||| |||||||    
T  43585941 taattttaatcctttaaaaaa-aagaccattggattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttc 43585849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31202987 - 31203068
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattc 82  Q
    ||||||||||||| ||||||||| ||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  31202987 ccttaacttatttcttttattcattttggtcccataaatcttaagtttctcaaacacgtcccttaacttatttcttttattc 31203068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3714617 - 3714550
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3714617 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacatcccttaact 3714550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43134144 - 43134079
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||| ||||||||||    
T  43134144 ttaacttatttcttttattcaatttggtcctataacttttaactttcttaaacacatcccttaact 43134079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 22012274 - 22012353
Alignment:
Q  117 aaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||| |||| |||||||| |  ||||||||  | ||||||||||||||||||||||||| |||||||||||||||||||    
T  22012274 aaaaaggagatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttctt 22012353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 31203071 - 31203126
Alignment:
Q  136 tacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttc 191  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  31203071 tacggaggtctatcaaattttataatgtatcaccaacacctaacttatttactttc 31203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 22013240 - 22013161
Alignment:
Q  117 aaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||| |||| |||||||| |  ||||||||  | ||||||||||||||||||||||||| |||||||||||||| ||||    
T  22013240 aaaaaggagatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcatctt 22013161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 3714514 - 3714443
Alignment:
Q  123 gagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||| |||||||| | |||| ||||| | || |||||||||||||||||||| | |||||||||||||||||    
T  3714514 gagatcgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 3714443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3713090 - 3713149
Alignment:
Q  8 ttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    |||||| ||||||| |||||||| | |||| ||||||||||||||||||| ||||||||||    
T  3713090 ttatttcttttatttaatttggttc-ataagttttaactttctcaaacacatcccttaact 3713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 3713185 - 3713256
Alignment:
Q  123 gagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||| |||||||| | |||| ||||| | || |||||||||||||| ||||| | |||||||||||||||||    
T  3713185 gagatcgttggataagggagatctattagatcttatagtgtatcacaaacacttgatttatttactttcttc 3713256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 522197 - 522163
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttc 92  Q
    ||||||||||||||||||||||||| |||||||||    
T  522197 gtcccttaacttatttcttttattcaatttggttc 522163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 43134014 - 43133976
Alignment:
Q  152 attttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  43134014 attttatagtgtatcaccaacacttgatttatttacttt 43133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 20066208 - 20066277
Alignment:
Q  115 taaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatt 184  Q
    ||||||| ||||||||||||| |  ||| || || | |||| | ||||||||||||||||||||||||||    
T  20066208 taaaaaaagagaccgttggataaaagagatccatcagatttaacagtgtatcaccaacacctaatttatt 20066277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 9244083 - 9244115
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  9244083 gtcccttaacttatttcttttattcaatttggt 9244115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 26364759 - 26364791
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  26364759 gtcccttaacttatttcttttattcaatttggt 26364791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29186685 - 29186899
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  29186685 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttattttattcaatttggttcaattttga 29186784  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||  |    
T  29186785 taattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttcttctttttc 29186884  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  29186885 ttccctcatcttcat 29186899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 19217648 - 19217843
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  19217648 ccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccattaacttatttcttttattcaatttggtacaattttga 19217747  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  19217748 taattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttcttctt 19217843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 43113695 - 43113890
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  43113695 ccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 43113794  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||    
T  43113795 taattttaatcccctaaaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccagcacctaatttatttgctttcttctt 43113890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18788657 - 18788443
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||| |||||| |||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  18788657 ccttaatttatttcttttattcaatatggtcctataaatcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttga 18788558  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||  |     
T  18788557 taattttaatcctctaaaaaaatagaccgttggattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctct 18788458  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  18788457 ttccctcatcttcat 18788443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 9391540 - 9391765
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||||| |||| | |||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  9391540 ccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttcacttatttcttttattcaatttggtacaattttga 9391639  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||   |    
T  9391640 taattttaatcctttaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcatcaacaccaaatttatttactttcttcttcttc 9391739  T
Q  201 tttcctcatcttcatgcaaccttcaa 226  Q
    || | |||||||||| || |||||||    
T  9391740 ttccatcatcttcattcatccttcaa 9391765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 3537447 - 3537642
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||| |    
T  3537447 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtctaattttaa 3537546  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttcttt 197  Q
    |||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  3537547 taattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtatatcaccatcacctaattt-tttactttcttcttt 3537642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 29188125 - 29187932
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||| |||| || |||||||||||    
T  29188125 ttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaattttgata 29188026  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| |||||||||||||| | ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  29188025 attttaatcccctaaaaaaagagaccgttggattgcagaggtctatcagattttatagtgcatcaccaacacctaatttatttactttcttctt 29187932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 44417478 - 44417673
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||    
T  44417478 ccttaacttatttcttttattcaatttggttccataagtcttaacattctcaaacacgtcccttaacttatttattttcttcaatttggtccaattttga 44417577  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| ||||  |||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||    
T  44417578 taattttaatcccctaaaaaaagagattgttggattacggaggtctatcagattttatagtctatcaccaacacctaatttatttactttcttctt 44417673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 48793613 - 48793418
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  48793613 ccttaacttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttgatccaattttga 48793514  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||  |||||||| ||||||||||||||||  |||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  48793513 taattttaatctcctaaaaaaagagaccgttggattacaaaggtgtataagattttatagtgtatcaccaacaccaaatttatttactttcttctt 48793418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 13597167 - 13597359
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||| ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||  ||||| | |||||||||||    
T  13597167 ttaacgtatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccctgaacttatttcttttattaaatttgat-caattttgata 13597265  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||||||||| || | |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13597266 attttaatcctctaaaaaaagatatcgttggattagggaggtctataagattttatagtgtatcaccaacacctaatttatttactttcttctt 13597359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 48792464 - 48792661
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||| |  ||||||||    
T  48792464 ccttaacttatttcttttattcaatttggtcccataagttttaactttttcaaacatgtcccttaacttatttcttttattcaatttgatctaattttga 48792563  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttc 198  Q
    |||||||||||  |||||||| ||||||||||||||||   ||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  48792564 taattttaatctcctaaaaaaagagaccgttggattacaagggtgtataagattttatagtgtatcaccaacaccaaatttatttactttcttctttc 48792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 27072751 - 27072562
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||    
T  27072751 ccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaattttga 27072652  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| ||||||||  | ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  27072651 taattttaatccactaaaaaaaaaaaccgttggattacagaggtctataagattttatagtttatcaccaacacctaatttatttacttt 27072562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 27205562 - 27205751
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||    
T  27205562 ccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaattttga 27205661  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| ||||||||  | ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  27205662 taattttaatccactaaaaaaaaaaaccgttggattacagaggtctataagattttatagtctatcaccaacacctaatttatttacttt 27205751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 44420617 - 44420425
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  44420617 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttgata 44420518  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||| | |||||||| || |||||||||||||| |||||||| | | |||||||||||||||||||| ||||||||||||||||||||||    
T  44420517 attttaatgccctaaaaaaagataccgttggattacgaaggtctatcaga-tttatagtgtatcaccaacatctaatttatttactttcttctt 44420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 43962666 - 43962442
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||| ||||| | |||||||||    
T  43962666 ccttaacttatttcttttattcaatttggtcacataagtcttagctttctcaaacatgtcccttaacttatttcttttattcaatttgatccaattttga 43962567  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||| |||||||||  |||||||||||||||| |||||||| | |||||||||| |||||| |||||||||||||||| ||||||||||   |    
T  43962566 taattttaatcatctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtatatcactaacacctaatttatttcctttcttcttcttc 43962467  T
Q  201 tttcctcatcttcatgcaaccttca 225  Q
    || |||||||| ||| || ||||||    
T  43962466 ttccctcatctacattcatccttca 43962442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 13750733 - 13750538
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  13750733 ccttaacttatttcttttattcaatttgatcacataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 13750634  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| ||||||||  |||||||||||||||| |||||||| | |||||||||||||||| || || ||||||||| ||||||| ||||    
T  13750633 taattttaatcccctaaaaaaacagaccgttggattacgaaggtctattagattttatagtgtatcatcatcaactaatttatatactttcgtctt 13750538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 7011654 - 7011844
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| || ||||| | |||||||| ||||||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  7011654 ccttaacttatttcttttattcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaattttga 7011753  T
Q  101 taattttaatcc-tctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| |  ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7011754 taattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttacttt 7011844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 7027012 - 7027202
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| || ||||| | |||||||| ||||||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  7027012 ccttaacttatttcttttattcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaattttga 7027111  T
Q  101 taattttaatcc-tctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| |  ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7027112 taattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttacttt 7027202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 9392910 - 9392717
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||| |||||  ||| |||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  9392910 ttaacttatttcttttatttaatttattcctataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgata 9392811  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||    
T  9392810 attttaatcccctagaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccggcacctaatttatttactttcttctt 9392717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 13749081 - 13749266
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaatttta 157  Q
    ||||| ||||||||||||| ||||  ||||| || |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||     
T  13749081 gtcccataacttatttcttatatttaatttgatttaattttgataattttaatcctctaaaaaatgagaccgttgaattacgtaggtctataaaa-tttc 13749179  T
Q  158 tagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcatgcaaccttcaacaattttcttcatccacat 245  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  13749180 tagtgtatcaccaacacctaatttatttaatttcttctttctctttcct-atcttcatacaacgttcaacaattttcttcatccacat 13749266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 18787169 - 18787364
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||| || ||||||||||||||| | |||||||| ||||| | ||||||||||||||||||||||||| ||||||| |||||||||    
T  18787169 ccttaatttatttcttttgtttaatttggtcccataaatcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtccaattttga 18787268  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| ||||||||  ||||||||||||||||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||||||||    
T  18787269 taattttaatcccctaaaaaaatagaccgttggattacggaggtttatcagattttatggtgtatcaccaacacttaatttatttactttcttctt 18787364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 45400107 - 45399912
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||  ||  |||||||| ||||| | ||||||||  |||||||||||||||||||||||||||||||   |||||| |||||||||    
T  45400107 ccttaacttatttgtttattttgatttggtctcataactcttaacttttgcaaacacgtcccttaacttatttcttttatttactttggtccaattttga 45400008  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||    
T  45400007 taattttaatcccctaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttctt 45399912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 32519846 - 32519658
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |    
T  32519846 ccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaaattatttcttttattcaatttggttcaattttaa 32519747  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactt 189  Q
    ||||||||||||  ||||||| |||||||||| |||||| |||||||  | ||| |||||||| ||||||||||||||||| |||||||    
T  32519746 taattttaatcccttaaaaaaagagaccgttgaattacgaaggtctaccagattgtatagtgtgtcaccaacacctaatttttttactt 32519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 37237322 - 37237132
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||| ||||||||| ||||| | |||||| |||||||||| |||||||||||||||  ||||||  ||||||| |||||||||    
T  37237322 ccttaatttatttcttttatttaatttggtctcataagtcttaactctctcaaacacatcccttaacttattt--tttattaaatttggtccaattttga 37237225  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  37237224 taattt-aatcctctaaaaaaagagatcgttggattacggaggtctatcagattttatagtgtatgaccaacacctaatttatttactttcttc 37237132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 32518442 - 32518616
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||||||            
T  32518442 ccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaaattatttcttttattcaatttggttc-------- 32518533  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatt 184  Q
     ||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  32518534 -aattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatt 32518616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 43961000 - 43961165
Alignment:
Q  47 ttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtct 146  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| ||||  |||||||||||||||  ||||||    
T  43961000 ttctcaaacacgtcccttaatttatttcttttattcaatttgatccaattttgataattttaatcctctacaaaaacagaccgttggattacaaaggtct 43961099  T
Q  147 ataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    || | ||||||||||||||||| |||||||||||||||||||||||||||   ||| ||||||||||||    
T  43961100 atcagattttatagtgtatcactaacacctaatttatttactttcttctt---cttccctcatcttcat 43961165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 26005429 - 26005565
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaatttta 157  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||  |||||||||| ||||||    
T  26005429 gtcccttaacttatttcttttattcaatttggttcaattttgataattttactccactaaaaaaagagaccgttggattacaaaggtctataagatttta 26005528  T
Q  158 tagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  26005529 tagtgtatcaccaacacgtaatttatgtactttcttc 26005565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 44746748 - 44746931
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgat 101  Q
    |||||||||||| |||||||||||||| ||  |||| | |||| ||||||||||| || | |||||||||||||||||||| |||||||  |||||||||    
T  44746748 cttaacttattttttttattcaatttgatcttataagtcttaattttctcaaacatgttcgttaacttatttcttttattcaatttggtcaaattttgat 44746847  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||||||||  || |||| |||||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||    
T  44746848 aattttaatcccttagaaaaagagaccgttggattacggaggtctatcatattttatagtgtattatcaacacctaatttattt 44746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 3538660 - 3538478
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||  || |||||||||||||||||          ||||||||    
T  3538660 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcttttcacttatttcttttattc----------aattttga 3538571  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    |||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||||  |||||||||||||| |||||||||||||||||||    
T  3538570 taattttagtcccctaaaaaaagagaccgttggattacggagatctatcaaattttacggtgtatcaccaacatctaatttatttactttctt 3538478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 44230455 - 44230625
Alignment:
Q  8 ttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataatttt 107  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||| |||||||     
T  44230455 ttatttcttttattcaatttagttccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattttaataatttc 44230554  T
Q  108 aatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaa 178  Q
    ||||| |||  ||| |||||||||||||||| ||||||||| | |||||| ||||||||| ||||||||||    
T  44230555 aatcccctacgaaaagagaccgttggattacagaggtctatcagattttacagtgtatcatcaacacctaa 44230625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 44748603 - 44748465
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaatttta 157  Q
    ||||||||| ||||||||||||||| || |||| ||||||||||||||||||||| ||| |||| ||||| ||||||||||| |||||||| | ||||||    
T  44748603 gtcccttaatttatttcttttattcaatatggtccaattttgataattttaatcccctagaaaaggagactgttggattacgaaggtctatcagatttta 44748504  T
Q  158 tagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44748503 tagtgtatcaccaacacctaatttatttactttcttctt 44748465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 12630584 - 12630799
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaac-ttatttcttttattccatttggttcaattttg 99  Q
    ||||||||||| | |||| |||||||||||| || || | |||| |||||||||||||||||||||| || ||| |||||||| |||||||  |||||||    
T  12630584 ccttaacttatgtcttttcttcaatttggtctcaaaagtcttaattttctcaaacacgtcccttaacctttttttttttattcaatttggtctaattttg 12630683  T
Q  100 ataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttcc 199  Q
    ||||||||||||| ||| |||| ||||| |||||||||| ||||| ||| | |||||||  || ||||| |||||||||||||||||||||||||||       
T  12630684 ataattttaatcccctagaaaaagagactgttggattacagaggtatatcagattttattatggatcactaacacctaatttatttactttcttcttctt 12630783  T
Q  200 ctttcctcatcttcat 215  Q
    ||| ||||||||||||    
T  12630784 cttccctcatcttcat 12630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 43115124 - 43114970
Alignment:
Q  61 ccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatag 160  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||||  |||||||  ||||||||||||||| || |||||| | |||||||||    
T  43115124 ccttaacttatttcttttattcaatttgatccaattttgataattttaatcccttaaaaaagaagaccgttggattactgaagtctatcagattttatag 43115025  T
Q  161 tgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    || |||| ||  ||||||||||||||||||||||||   ||| ||||||||||||    
T  43115024 tgcatcatcataacctaatttatttactttcttcttcttcttccctcatcttcat 43114970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 13599293 - 13599159
Alignment:
Q  63 ttaacttatttcttttattccatttggttcaattttgataattttaatc-ctctaaaaaatgagaccgttggattacggaggtctataaaattttatagt 161  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||  ||  ||||||  | |  |||||||||||||||||||| | ||||||||||    
T  13599293 ttaacttatttcttttattcaatttgctccaattttgataattttaatatcttaaaaaaaaaaaattgttggattacggaggtctatcagattttatagt 13599194  T
Q  162 gtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||  |||||||||||||||||||||||||||    
T  13599193 gtatcagtaacacctaatttatttactttcttctt 13599159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37235834 - 37235941
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||| |||||||| |||||| |   ||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  37235834 ccttaacttatttcttttatttaatttggttccataaatcccaactttctcaaacgcgtcccttaacttatttctttgattcaatttggtccaattttga 37235933  T
Q  101 taatttta 108  Q
     |||||||    
T  37235934 gaatttta 37235941  T

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Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45688888 - 45688960
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttattt 73  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||    
T  45688888 ccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacatcccttaactcattt 45688960  T

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Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 12630526 - 12630613
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||| | ||||||||||||||||| ||||| | |||||||||||||||| || ||||||||||| |||||| ||| |||||||    
T  12630526 ttaacttatgtcttttattcaatttggtctcataagtcttaactttctcaaacatgttccttaacttatgtcttttcttcaatttggt 12630613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 9357739 - 9357679
Alignment:
Q  155 ttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    |||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||    
T  9357739 ttatagtgtatcaccaacacctaatttatttactttcttcatcttctttcctcatcttcat 9357679  T

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Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 45398657 - 45398737
Alignment:
Q  114 ctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||||| |||| | |||||| | |||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  45398657 ctaaaaaaggagatcattggataagggaggtttatcaaatcttatagtgtatcaccaacatctaatttatttactttcttc 45398737  T

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Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 19218980 - 19218897
Alignment:
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||||||||||| ||||| ||||||||||||| |  |||||| || | |||| | |||||||||||||||||||||||||||    
T  19218980 aattttaatcctctgaaaaaggagaccgttggataaaagaggtccatgagatttaacagtgtatcaccaacacctaatttattt 19218897  T

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Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26006840 - 26006773
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||| || ||||||| ||||||||||    
T  26006840 ccttaacttatttcttttgttcaatttggtcccataagttttaactatcacaaacacatcccttaact 26006773  T

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Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 42611458 - 42611512
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacac 57  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  42611458 ttaacttatttcttttattcaatttggttccataagttttaactttctcaaacac 42611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 27071043 - 27071108
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||| ||||||||||||||||||||||| |||||||  || ||||||| ||||||||||    
T  27071043 ttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaact 27071108  T

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Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 27207270 - 27207205
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||| ||||||||||||||||||||||| |||||||  || ||||||| ||||||||||    
T  27207270 ttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaact 27207205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7057426 - 7057359
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||  || ||||||| ||||| ||||    
T  7057426 ccttaacttatttcttttattcaatttggtcccataagttttaaccgtcacaaacacatccctcaact 7057359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 44231807 - 44231765
Alignment:
Q  152 attttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  44231807 attttatagtgtatcaccaacacctgatttatttactttcttc 44231765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19008952 - 19009021
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaactta 70  Q
    ||||||||||||| |||| |||||||||||||||||| | |||| ||| |||| | ||||||||||||||    
T  19008952 ccttaacttatttctttttttcaatttggtcccataagtattaaatttgtcaatcgcgtcccttaactta 19009021  T

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Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19016794 - 19016725
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaactta 70  Q
    |||||| |||||| |||| |||||||||||||||||| | |||| ||| |||| ||||||||||||||||    
T  19016794 ccttaatttatttctttttttcaatttggtcccataagtattaaatttgtcaaccacgtcccttaactta 19016725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 37235939 - 37235994
Alignment:
Q  135 ttacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||||||| || | |||||| | ||||||||||||||||||||||||||||||    
T  37235939 ttacggaggtcaatcagattttacaatgtatcaccaacacctaatttatttacttt 37235994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44231939 - 44231892
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaacttt 48  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  44231939 ccttaacttatttcttttattcaatttggtcccataaatcttaacttt 44231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 45689023 - 45689060
Alignment:
Q  157 atagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45689023 atagtgtatcaccaacacttaatttatttactttcttc 45689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 44417475 - 44417509
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttc 92  Q
    ||||||||||||||||||||||||| |||||||||    
T  44417475 gtcccttaacttatttcttttattcaatttggttc 44417509  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 3537444 - 3537476
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  3537444 gtcccttaacttatttcttttattcaatttggt 3537476  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 3538663 - 3538631
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  3538663 gtcccttaacttatttcttttattcaatttggt 3538631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 7057429 - 7057397
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  7057429 gtcccttaacttatttcttttattcaatttggt 7057397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 9391537 - 9391569
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  9391537 gtcccttaacttatttcttttattcaatttggt 9391569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 19217645 - 19217677
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  19217645 gtcccttaacttatttcttttattcaatttggt 19217677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 29186682 - 29186714
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  29186682 gtcccttaacttatttcttttattcaatttggt 29186714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 43113692 - 43113724
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  43113692 gtcccttaacttatttcttttattcaatttggt 43113724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 43960963 - 43960995
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  43960963 gtcccttaacttatttcttttattcaatttggt 43960995  T

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Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 43962669 - 43962637
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  43962669 gtcccttaacttatttcttttattcaatttggt 43962637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 44231942 - 44231910
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  44231942 gtcccttaacttatttcttttattcaatttggt 44231910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 45688885 - 45688917
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  45688885 gtcccttaacttatttcttttattcaatttggt 45688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 48792461 - 48792493
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  48792461 gtcccttaacttatttcttttattcaatttggt 48792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 51693168 - 51693363
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  51693168 ccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttggttcaattttga 51693267  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  51693268 taattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttcttctt 51693363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 52086648 - 52086842
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |    
T  52086648 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttaa 52086747  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttcttt 197  Q
    |||||||||||| ||||||||  | |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  52086748 taattttaatcccctaaaaaa--aaaccgttggattacgaaggtctataaaattttatagtgtatcaccatcacctaatttttttactttcttcttt 52086842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7111572 - 7111377
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | ||||||||||||||||||||| |||||| ||||||||||||| ||||||| |||||||||    
T  7111572 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccattaactgatttcttttattcaatttggtccaattttga 7111473  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  7111472 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttctt 7111377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17244196 - 17244410
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  17244196 ccttaacttatttcttttattcaatttggtcccataagtctcaactttctcaaacacgtcccttaacttatttctttgattcaatttggtccaattttga 17244295  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||| | |||||||| ||||||||| | ||||||||||||||||||||||||   |    
T  17244296 taattttaatctcctaaaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccgatacctaatttatttactttcttcttcttc 17244395  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  17244396 ttccctcatcttcat 17244410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 5488964 - 5488780
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||||||    
T  5488964 ccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttggtccaattttga 5488865  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    ||||||||||||  || |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5488864 taattttaatcccttagaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttattt 5488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 51468360 - 51468574
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |    
T  51468360 ccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttaa 51468459  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| ||||||||  |||  | |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||   |    
T  51468460 taattttaatcccctaaaaaaaaagattgatggattacggaggtctatcagattttatagtgtatcaccaacacccaatttatttacttttttcttcttc 51468559  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  51468560 ttccctcatcttcat 51468574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 7110247 - 7110442
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||| |||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  7110247 ccttaatttatttcttttatttaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 7110346  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||| ||||||||| ||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||    
T  7110347 taattttaatcccctaaaaaaagagatcgttggattgcggaggtctatcagattttatagtgtatcatcaacgcctaatttatttactttcttctt 7110442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 45228298 - 45228510
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||| ||||| ||||||||| ||||||| || |||||||||| | |||||||||||||||||||| ||||||| ||||||| |||    
T  45228298 ttaacttatttcttttatttaattttgtcccataaattttaaccttatcaaacacgttctttaacttatttcttttattcaatttggtccaattttaata 45228397  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctt 202  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| ||| | |||||||||||||||||||||   |||    
T  45228398 attttaatcccctaaaaaaagagaccgttggattacggagatctatcaaattttatagtgtatcacaaacgcttaatttatttactttcttcttcttctt 45228497  T
Q  203 tcctcatcttcat 215  Q
     ||||||||||||    
T  45228498 ccctcatcttcat 45228510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 50485093 - 50484913
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||||||||||  |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  50485093 ccttaacttatttcatttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 50484994  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||||| |||||||| |||||| |||||||||  |||||||| | |||||| |||||||||||||||||||||||    
T  50484993 taattttaatcccctaaaaaaagagaccattggattacataggtctatcagattttacagtgtatcaccaacacctaattt 50484913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 51468998 - 51468803
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||| ||||| ||||||| ||||||| |    
T  51468998 ccttaacttattttttttattcaatttggtcccataaatcttaactttttcaaacacgtccctaaacttatttcttctattcaatttggtccaattttaa 51468899  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| ||||||||  | | | ||||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  51468898 taattttaatcccctaaaaaaaaaaagcattggattacggagatctattagattttacagtgtatcaccaacacctaatttatttactttcttctt 51468803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 52087870 - 52087679
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgat 101  Q
    |||||||||||| ||||||||||||||||| ||||  | ||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||    
T  52087870 cttaacttatttcttttattcaatttggtctcatatgtcttaactttctcaaacacgtcctttcacttatttcttttattcaatttgattcaattttgat 52087771  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    ||||||| ||| |||||||| |||||||||| ||||||||||||||| ||||||||  |||||||||||||| |||||||||||| ||||||    
T  52087770 aattttagtcccctaaaaaaagagaccgttgaattacggaggtctatcaaattttacggtgtatcaccaacatctaatttatttaatttctt 52087679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 52759384 - 52759598
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||| ||||||||  ||||| | |||||||||||||| |||||| ||||||||| | |||||||| |||| || |||||||||    
T  52759384 ccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctattttattcaatttagtccaattttga 52759483  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||   |||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||   |    
T  52759484 taattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 52759583  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  52759584 ttccctcatcttcat 52759598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 45229700 - 45229508
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  45229700 ccttaatttatttcttttattcaatttggtctcataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttga 45229601  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    ||||||||||||| |||||||  |||  |||||||||||||||||||| | |||||||| || ||||||||||||||||||||||| ||||||    
T  45229600 taattttaatcctataaaaaaaaagattgttggattacggaggtctatcagattttataatggatcaccaacacctaatttatttagtttctt 45229508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 38235246 - 38235033
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |    
T  38235246 ccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttggtccaattttaa 38235147  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||| |||||||| | ||||||  | |||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||   |    
T  38235146 taagtttaatcc-caaaaaaaacaaaccgttggattacgaatgtctataagattttacagtgtatcaccaacacctaatttatttactttcttcttcttc 38235048  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  38235047 ttccctcatcttcat 38235033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 5488522 - 5488702
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||| | ||||||   ||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||    
T  5488522 ccttaatttatttcttttattcaatttgattccataagacttaactttctcaaacacgtcctttaacttatttcttttattcaatttgatccaattttga 5488621  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    ||||||||||||  || |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  5488622 taattttaatcccttagaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacgtaattt 5488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 40187629 - 40187800
Alignment:
Q  6 acttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataatt 105  Q
    |||||||| ||||||||||||||||||||||| | |||||||| ||||||| |||| ||||||||||||||||| || ||||||| ||||||| ||||||    
T  40187629 acttatttcttttattcaatttggtcccataagtcttaactttatcaaacatgtcc-ttaacttatttcttttactcaatttggtccaatttttataatt 40187727  T
Q  106 ttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaa 178  Q
    ||||||| |||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  40187728 ttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatcgtgtatcaccaacacctaa 40187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 18819283 - 18819460
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||| |||||||| | ||||||||||||| |||||||||||| ||||||||||||||| ||||||  ||||||| |    
T  18819283 ccttaaattattttttttattcaatttgatcccataagtcttaactttctcaatcacgtcccttaatttatttcttttattcaatttggcccaattttaa 18819382  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaa 178  Q
    |||||||||||| |||  ||| || ||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  18819383 taattttaatcccctatgaaaagaaaccgttggattacggaggtatatcagattttatagtgtatcaccaacacctaa 18819460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 52761633 - 52761502
Alignment:
Q  61 ccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatag 160  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||| | |||||||||    
T  52761633 ccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatag 52761534  T
Q  161 tgtatcaccaacacctaatttatttactttct 192  Q
    ||||||||||||||||||||||||||||||||    
T  52761533 tgtatcaccaacacctaatttatttactttct 52761502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 1821929 - 1822114
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttctttt-attccatttggttcaattttg 99  Q
    |||||| |||||| ||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||| |||  |||| ||  |||||||    
T  1821929 ccttaatttattttttttattcaattttgtcctataaattttaactttctcaaacacgtcccttaacttatttttttttatttaatttagtctaattttg 1822028  T
Q  100 ataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||||||||||| ||||||| ||||||||||| ||||| ||||||||   ||||||||||||||||  ||||||||||||||||    
T  1822029 ataattttaatcctttaaaaaaagagaccgttgggttacgaaggtctatctgattttatagtgtatcattaacacctaatttattt 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 47533950 - 47533758
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgat 101  Q
    ||||| |||||| ||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||| ||||||| || |||| ||||| ||||||||||||    
T  47533950 cttaaattatttcttttatttaatttagtcccataagttttaactttttcaaatacgtctcttaaattatttcattcattcaatttgattcaattttgat 47533851  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||| |||||||| ||||||  ||||||||  ||||  ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  47533850 aattataatcctccaaaaaaatagaccgttaaattagagagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 47533758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 50483533 - 50483726
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| || |||||||||||||| ||||| | |||| ||||| ||| |||||  |||| ||||||||||||||| ||||||| ||||||| |||    
T  50483533 ttaacttatttcttgtattcaatttggtctcataagtcttaattttcttaaaaacgtcatttaatttatttcttttattcaatttggtccaatttttata 50483632  T
Q  103 attttaatcctct-aaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||| ||| || |||||| ||||| ||||||||||||| |||||  | ||||||| |||||| ||||||||||||||||||||||||||||||    
T  50483633 attttactcccctaaaaaaaagagactgttggattacggaagtcta-cagattttatcgtgtataaccaacacctaatttatttactttcttctt 50483726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 47532978 - 47533150
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||| ||||| | |||||||| |||||||||| |||||| ||||||| ||||||| ||||| |||||||||||    
T  47532978 ccttaagttattttttttattcaatttggtctcataaatcttaactttatcaaacacgttccttaaattatttcatttattcaatttgattcaattttga 47533077  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacac 174  Q
    ||||||||||| |||||||||  |||| |||| |||| ||| |||||| | |||||||| ||||||||||||||    
T  47533078 taattttaatcttctaaaaaa-cagactgttgaattatggaagtctatcagattttataatgtatcaccaacac 47533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 1823389 - 1823215
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||| ||| ||||| | ||||   ||||||||| ||| |||||||||||| |||||||| ||||| | |||||||||    
T  1823389 ccttaacttatttcttttattcaatttagtcacataagtcttaa---tctcaaacatgtcgcttaacttattt-ttttattcaatttgatccaattttga 1823294  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaat 179  Q
    ||||||||||| ||||||||   | |||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  1823293 taattttaatcttctaaaaagataaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaat 1823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17245761 - 17245621
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||| ||||| | |||||| ||||||||| |||||||||||||||| |||||||  ||||||| |||||||||    
T  17245761 ccttaatttatttcttttattcaatttggtctcataagtcttaactctctcaaacaagtcccttaacttattt-ttttattaaatttggtccaattttga 17245663  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggag 142  Q
    | |||||||||||||||||||  |||||||||||||||||||    
T  17245662 tcattttaatcctctaaaaaaaaagaccgttggattacggag 17245621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 21203124 - 21203246
Alignment:
Q  93 aattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttct 192  Q
    |||||| |||||| |||||| |||||||| ||||||||||||||||  |||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  21203124 aattttcataattctaatcccctaaaaaaagagaccgttggattacaaaggtctatcagattttatagtgtatcatcaacacctaatttatttactttct 21203223  T
Q  193 tctttccctttcctcatcttcat 215  Q
    | ||   |||| |||||||||||    
T  21203224 tattcttcttttctcatcttcat 21203246  T

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Target: chr1; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25181522 - 25181596
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttct 75  Q
    ||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  25181522 ccttaacttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaacttatttct 25181596  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 49784996 - 49784941
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtcta 147  Q
    ||||||| ||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  49784996 caattttaataattttaatcccctaaaaaaagagactgttggattacggaagtcta 49784941  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18820853 - 18820806
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaacttt 48  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||    
T  18820853 ccttaacttatttcttttattcaatttggtctcataaatcttaacttt 18820806  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 51088653 - 51088735
Alignment:
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatt 184  Q
    ||||||||||  |||||||| ||||||||||||| | |||||||| | | || | ||  |||||||||||||| |||||||||    
T  51088653 aattttaatctcctaaaaaaggagaccgttggataaaggaggtctgtgatatctaatcatgtatcaccaacacttaatttatt 51088735  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 18820756 - 18820679
Alignment:
Q  117 aaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||| |||| |||||||| |  ||||||||  | |||| |||||||||||| ||||||| ||| |||||||||||||    
T  18820756 aaaaaagagatcgttggataagtgaggtctactagatttgatagtgtatcactaacacctgattcatttactttcttc 18820679  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 18820856 - 18820824
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  18820856 gtcccttaacttatttcttttattcaatttggt 18820824  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 25181519 - 25181551
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  25181519 gtcccttaacttatttcttttattcaatttggt 25181551  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 51693165 - 51693197
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  51693165 gtcccttaacttatttcttttattcaatttggt 51693197  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 52086645 - 52086677
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  52086645 gtcccttaacttatttcttttattcaatttggt 52086677  T

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Target: chr4 (Bit Score: 148; Significance: 4e-78; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7261640 - 7261445
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  7261640 ccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 7261541  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| ||||||||  ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7261540 taattttaatcccctaaaaaaatagaccattggattacgaaggtctataagattttatagtgtatcaccaacacctaatttatttactttcttctt 7261445  T

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Target: chr4; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 10802910 - 10803105
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10802910 ccttaacttatttcttttattcaatttggtcccataaattttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 10803009  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| | |||||||| |||||||||||||||||||||| ||| | |||||||| ||||||||||||||| ||||||||||||||||||||    
T  10803010 taattttaataccctaaaaaaagagaccgttggattacggaggtttatcagattttatattgtatcaccaacaccgaatttatttactttcttctt 10803105  T

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Target: chr4; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22621888 - 22622099
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  22621888 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctttacttatttcttttattcaatttggtccaattttga 22621987  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||   |    
T  22621988 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccgacaccgaatttatttactttcttctt---c 22622084  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  22622085 ttccctcatcttcat 22622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 34095756 - 34095561
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  34095756 ccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttgttcaatttggtccaattttga 34095657  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  34095656 taattttaatcccctaaaaaaggagaccgttgaattacggaggtctatcagattttatagtgtatcacccacacctaatttatttactttcttctt 34095561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 38032517 - 38032322
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  38032517 ccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 38032418  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  38032417 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttctt 38032322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17356382 - 17356596
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| | ||| || | |||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  17356382 ccttaacttatttcttttattcaatttgatgccagaaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttgttccaattttga 17356481  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| || |||||||||||||||   |    
T  17356482 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctagttcatttactttcttcttcttc 17356581  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  17356582 ttccctcatcttcat 17356596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 8815452 - 8815259
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||    
T  8815452 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttctattcaaattggtccaattttgata 8815353  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||||||||||  | ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||    
T  8815352 attttaatcctctaaaaaaaaaaaccgttggattacggaggtctatcagattttatagtgtatcaccaacaccaaatttatttactttcttctt 8815259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 38031189 - 38031384
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  38031189 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 38031288  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||  |||||||  ||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  38031289 taattttaatcccataaaaaaaaagaccgttgaattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttctt 38031384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 10804292 - 10804099
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||| | || |||||||||||||||||||||| |||||||||||||||||    
T  10804292 ccttaacttatttcttttattcaatttggtcctataagttttaactttcttaaataagttccttaacttatttcttttattcaatttggttcaattttga 10804193  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||| ||||||||| |||| |||||||||||||||||||||    
T  10804192 taattttaatccactaaaaaaaaagaccgttggattacggaggtctatcagattttacagtgtatcatcaacgcctaatttatttactttcttc 10804099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 56233745 - 56233973
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | | |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  56233745 ccttaacttatttcttttattcaatttggtcgcataagtctcaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttga 56233844  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| |||||||| |||||||                ||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |    
T  56233845 taattttaatcccctaaaaaaagagaccg----------------tataagattttatagtgtatcgccaacacctaatttatttactttcttcttcctc 56233928  T
Q  201 tttcctcatcttcatgcaaccttcaacaattttcttcatccacat 245  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  56233929 tttcctcatcttcatgcaacattcaacaattttcatcatccacat 56233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 22623226 - 22623029
Alignment:
Q  15 ttttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctc 114  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |    
T  22623226 ttttattcaatttggtcccataagtcttaactttctcaagcacgtccctttacttatttcttttattcaatttggtccaattttgataattttaatcccc 22623127  T
Q  115 taaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttca 214  Q
    || |||| |||||||||||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||| |||||||   ||| |||||||||||    
T  22623126 tacaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccaacatctaatttatttactctcttctt---cttccctcatcttca 22623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 23758066 - 23757872
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttc-aattttgat 101  Q
    |||| |||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||  |||| | || |||||||||    
T  23758066 ttaatttatttcttttattcaatttagtctcataagttttaactttctcaaacacgtcccttaacttatttcttttattaaattttgatccaattttgat 23757967  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  23757966 aattttaatcctccaaaaaaagagaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacctaatttatttactttcttctt 23757872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 18091601 - 18091815
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||| ||||||||  ||||| | |||||||||||||| |||||| ||||||||| | |||||||| |||| || |||||||||    
T  18091601 ccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctattttattcaatttagtccaattttga 18091700  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||   |||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||   |    
T  18091701 taattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 18091800  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  18091801 ttccctcatcttcat 18091815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 8814156 - 8814340
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||| ||||||||| | ||| |||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||    
T  8814156 ccttaacttatttcttttattcaatttagtcccataaatcttatctttctcaaacatgtcccttaacttatttcttttattcaatttggtcgaattttga 8814255  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattta 186  Q
    |||||||||| | ||||||||| |||| |||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  8814256 taattttaataccctaaaaaat-agactgttggattacggaggtctatcagattttatagtgtaacaccaacacctaatttattta 8814340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 48499385 - 48499573
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| |||||||| ||||||| |||||||||    
T  48499385 ccttaacttatttcttttattcaatttggtcccataattcttaactttttcaaacatgtcccttaacttatttattttattcaatttggtccaattttga 48499484  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||||| | ||||||  |||||||||||||| ||||||| ||||||||    
T  48499485 taattttaatcccctaaaaaaagagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaattt-tttacttt 48499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 5433502 - 5433293
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||| |||||||| ||||  | |||||||||||    
T  5433502 ttaacttatttcttttattcaatttggtcctataagttttaactttctcaaacatgtgccttaacttatttattttattcaatttactccaattttgata 5433403  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctt 202  Q
    |||||||| | ||||||| |||||| |||| ||||||||||||||| | |||||||| |||||||| ||||||||||||||||| |||||||||   |||    
T  5433402 attttaataccctaaaaattgagactgttgtattacggaggtctatcagattttataatgtatcacaaacacctaatttatttaatttcttctt---ctt 5433306  T
Q  203 tcctcatcttcat 215  Q
     ||||||||||||    
T  5433305 ccctcatcttcat 5433293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 35191838 - 35192019
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||  ||||| | ||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||    
T  35191838 ccttaacttatttcttttattcaatttggtttcataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttagttcaattttga 35191937  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||| ||||||||||||||   |||| ||||||||||||||    
T  35191938 taattttaatcccctaaaaaaagagaacgttggattacggaagtctatcaaattttatagtgt---accaccacctaatttattt 35192019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 48501418 - 48501226
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| |||||||||||| |||  ||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||  |||||| |||    
T  48501418 ttaacttatttcttttattcaattaggtttcataattcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtctaattttaata 48501319  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
     ||||||||| |||||||| ||||||||| |||||||||||||| | | ||||||| |||||||| ||||||||||||||||||||||||||||    
T  48501318 -ttttaatcccctaaaaaaagagaccgttagattacggaggtctgtcagattttattgtgtatcatcaacacctaatttatttactttcttctt 48501226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17357960 - 17357778
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| || || | |||||||||    
T  17357960 ccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatatgatccaattttga 17357861  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttat 183  Q
    |||||||||||  || ||||| |||||||||| ||||||||||||||  | |||||||| ||||||| ||| || ||||||||    
T  17357860 taattttaatctcctgaaaaaagagaccgttgaattacggaggtctaccagattttataatgtatcagcaatacttaatttat 17357778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 56235117 - 56234923
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||| || ||||| | |||||||| ||||||||  ||||||||||||||||||||||| ||| |||  ||||||||    
T  56235117 ccttaatttatttcttttattcaatttgatctcataagtcttaactttatcaaacacaccccttaacttatttcttttattcaattcggtctaattttga 56235018  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    || ||||||||||||||||||  |||||  || |||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  56235017 tacttttaatcctctaaaaaa-cagaccaatgaattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 56234923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 35193293 - 35193146
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||| |||||   ||||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||    
T  35193293 ccttaatttatttcttttattcaatttggtctcataaaacttaactttctcaaacacgtcctttaacttatttcttttattcaatttggtccatttttga 35193194  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctat 148  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  35193193 taattttaatcccctagaaaaagagaccgttggattacggaggtctat 35193146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 36074891 - 36074677
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaact-ttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttg 99  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||||| |||||||  ||||||     
T  36074891 ccttatcttatttattttattcaatttagtcccataaattttaactcttctcaagcacgttccttaacttattttttttattcaatttggtctaattttt 36074792  T
Q  100 -ataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttc 198  Q
     ||| ||||||||   |||||||  ||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||      
T  36074791 tatatttttaatctcataaaaaa--agatcgttggattacgaaggtctatcatattttatagtgtatcaccaacacctaatttatttaatttcctcttct 36074694  T
Q  199 cctttcctcatcttcat 215  Q
     ||| ||||||||||||    
T  36074693 tcttccctcatcttcat 36074677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 35925804 - 35925936
Alignment:
Q  93 aattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttct 192  Q
    ||||||||||||||||||| |||||||||  |||| |||||||||||||| ||||| | |||||||||||||||  ||||||||||||||||||||||||    
T  35925804 aattttgataattttaatcttctaaaaaaaaagactgttggattacggagatctatcagattttatagtgtatcgtcaacacctaatttatttactttct 35925903  T
Q  193 tctttccctttcctcatcttcatgcaaccttca 225  Q
    ||||   ||  |||||||||||| || ||||||    
T  35925904 tcttcttctcccctcatcttcattcatccttca 35925936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 35927122 - 35927018
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttc 191  Q
    ||||||||||||||||||||  ||||||||  ||| |||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  35927122 caattttgataattttaatctcctaaaaaaaaagatcgttggattacgaaggtctaccagattttatagtgtatcaccaacacctaatttatttactttc 35927023  T
Q  192 ttctt 196  Q
    |||||    
T  35927022 ttctt 35927018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48081627 - 48081552
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttctt 76  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||    
T  48081627 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaagttatttctt 48081552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48081687 - 48081598
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||  |||||||||||||||| |||||| | |||||||| ||||| | ||||||||||||||||||||||||| |||||||    
T  48081687 ccttaacttattccttttattcaatttggttccataagtcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggt 48081598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34122899 - 34122827
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttattt 73  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||    
T  34122899 ccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaactcattt 34122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48463081 - 48463014
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  48463081 ccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacatcccttaact 48463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 48080292 - 48080372
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattc 82  Q
    |||||||||||| ||||||| ||||||||  ||||| | |||||||||||||||  |||| ||||||||||||||||||||    
T  48080292 cttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaacttgtcctttaacttatttcttttattc 48080372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 48081361 - 48081281
Alignment:
Q  117 aaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttcttt 197  Q
    ||||| |||||||||||||| | ||  ||||| | | |||||| |||||||||||||||||||||||||||||||||||||    
T  48081361 aaaaaagagaccgttggattccagatatctatgagagtttatactgtatcaccaacacctaatttatttactttcttcttt 48081281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 48081536 - 48081469
Alignment:
Q  129 gttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||| ||||||||| | | | |||||| ||||||||||||||||||||||||||||||||||||    
T  48081536 gttggattgcggaggtctttcagagtttataatgtatcaccaacacctaatttatttactttcttctt 48081469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34121320 - 34121387
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    |||||| |||||| ||||||||||||||||| ||||| | ||||||||||||||||| || |||||||    
T  34121320 ccttaatttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcacttaact 34121387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 34122796 - 34122725
Alignment:
Q  123 gagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||| |||||||| | |||| ||||| | || |||||||||||||||||||| | |||||||||||||||||    
T  34122796 gagaacgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 34122725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 48462991 - 48462907
Alignment:
Q  110 tcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||| ||||  |||| |||||||||| |||| ||||| | || ||||| ||||||| |||||| | |||||||||||||||||    
T  48462991 tcctctcaaaatagagatcgttggattagggagatctatcagatcttatactgtatcatcaacacatgatttatttactttcttc 48462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 17522546 - 17522475
Alignment:
Q  114 ctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||| | ||||||||||||  | |||||||||||| || | | ||||||||||| |||||||||||||||    
T  17522546 ctaaaacaggagaccgttggaaaaaggaggtctataagatctaagagtgtatcaccgacacctaatttattt 17522475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 17357963 - 17357929
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttc 92  Q
    ||||||||||||||||||||||||| |||||||||    
T  17357963 gtcccttaacttatttcttttattcaatttggttc 17357929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 21570423 - 21570330
Alignment:
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||||| ||||| |||||  |||||||||||| | |||||||||| | || | || ||||||||||| | |||||||   |||||||||||    
T  21570423 taattttaaacctctcaaaaagaagaccgttggataaaggaggtctatcagatctaatcgtgtatcaccagcgcctaattatattactttcttc 21570330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 35191835 - 35191868
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggtt 91  Q
    ||||||||||||||||||||||||| ||||||||    
T  35191835 gtcccttaacttatttcttttattcaatttggtt 35191868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 10804295 - 10804263
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  10804295 gtcccttaacttatttcttttattcaatttggt 10804263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 22621885 - 22621917
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  22621885 gtcccttaacttatttcttttattcaatttggt 22621917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 34122902 - 34122870
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  34122902 gtcccttaacttatttcttttattcaatttggt 34122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 48463084 - 48463052
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  48463084 gtcccttaacttatttcttttattcaatttggt 48463052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 56233742 - 56233774
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  56233742 gtcccttaacttatttcttttattcaatttggt 56233774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 32713977 - 32713785
Alignment:
Q  4 taacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataa 103  Q
    |||||||||| ||||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  32713977 taacttatttcttttattcagtttggttccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataa 32713878  T
Q  104 ttttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  32713877 ttttaatcccctaaaaaaagtgaccgttggattacggaggtctataagattttacagtgtatcaccaacacctaatttatttactttcttctt 32713785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 32349134 - 32348939
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  32349134 ccttaatttatttcttttattcaatttggtcttataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 32349035  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  32349034 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttctt 32348939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 11801439 - 11801247
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  11801439 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 11801340  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  11801339 taattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcattaacacctaatttatttactttctt 11801247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 34996854 - 34996647
Alignment:
Q  5 aacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataat 104  Q
    ||||||||| ||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  34996854 aacttatttcttttattcaatttagtcccataagtcttaactttctcaaatacgtcccttaacttatttcttttattcaatttggtccaattttgataat 34996755  T
Q  105 tttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctttc 204  Q
    |||||||  ||||||||  |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||   ||| |    
T  34996754 tttaatctcctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttctt---cttcc 34996658  T
Q  205 ctcatcttcat 215  Q
    |||||||||||    
T  34996657 ctcatcttcat 34996647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 32712376 - 32712587
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||| |||||||| |||| | |||  ||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||    
T  32712376 ccttaacttatttcttttattcagtttggtcctataaatcttacatttctcaaatacgtctcttaacttatttcttttattcaatttggtccaattttga 32712475  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||   |    
T  32712476 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtaccaccaacacctaacttatttactttcttctt---c 32712572  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  32712573 ttccctcatcttcat 32712587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 3000890 - 3000695
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||||    
T  3000890 ccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacctcccttaacttatttcttttattcaatttagtccaattttga 3000791  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||   ||| |||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||    
T  3000790 taattttaatcccctaaaaacacagatcgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttctt 3000695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 32347829 - 32348024
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||||||    
T  32347829 ccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaagtgatttcttttattcaatttggtccaattttga 32347928  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||| ||||||||||||| ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  32347929 taattttaatcccctaaaaaaagagaacgttggattacgggggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttctt 32348024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 18572908 - 18573100
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||| | ||||  |||||||||||    
T  18572908 ttaacttatttcttttattcaatttggtcccataagtcttaactttcttaaaaacgtcccttaacttatttcttttattcaaattgggccaattttgata 18573007  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| || || |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||    
T  18573008 attttaatcccctaaaaaa-gacactgttggattacggaggtctatcaaattttacagtgtatcaccaacacataatttatttactttcttctt 18573100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 34995375 - 34995586
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||  |||||||||||||||||||| ||||||| ||||||| |||    
T  34995375 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtct-ttaacttatttcttttattcaatttggtccaattttaata 34995473  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctt 202  Q
    |||||||||| ||||||||  |||||||| ||||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||   |||    
T  34995474 attttaatcccctaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttctt 34995573  T
Q  203 tcctcatcttcat 215  Q
     ||||||||||||    
T  34995574 ccctcatcttcat 34995586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19383244 - 19383057
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaactta--tttcttttattccatttggttcaatttt 98  Q
    ||||||||||||| ||||||||||||       |||| | ||||||||||||||||||||||||||||||  ||| |||||||| ||||| |  ||||||    
T  19383244 ccttaacttatttcttttattcaatt-------ataagtcttaactttctcaaacacgtcccttaacttattttttttttattcaatttgatctaatttt 19383152  T
Q  99 gataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| | |||||||  |||||||||||||||||  ||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||    
T  19383151 gataattttaatgccctaaaaa--gagaccgttggattacgatggtctatcagattttatagtgtatca-caacatctaatttatttactttcttctt 19383057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29479291 - 29479146
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||| |    
T  29479291 ccttaaattatttcttttattcaatctggtcccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattttaa 29479192  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtct 146  Q
    |||||| ||||| |||  ||| ||||| |||||||||| |||||||    
T  29479191 taatttcaatcccctacgaaaagagacagttggattacagaggtct 29479146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 21094517 - 21094615
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  21094517 caattttgataactttaatcccctaaaaaaagagaccgttggattacggaggtctactagattttatagtgtatcaccaacacctaatttatttacttt 21094615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 27719848 - 27719941
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattta 186  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27719848 caattttgatgattttaatcccctaaaaaa-gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18574390 - 18574301
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggt 90  Q
    |||| |||||||| |||||||||||||||| |||||| | ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  18574390 ccttgacttatttcttttattcaatttggttccataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatttggt 18574301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 21095348 - 21095281
Alignment:
Q  129 gttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| |||||    
T  21095348 gttggattacggaggtctaccagattttatagtgtatcaccaacacctaatttatttactttattctt 21095281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 18574271 - 18574165
Alignment:
Q  140 gaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttct-----ttccct-ttcctcatcttcatgcaaccttcaacaatttt 233  Q
    ||||||||| | ||||||||||||| ||||||||||  ||||||||||||||||||     ||||||  ||||||||||||| ||||||||| |||| ||    
T  18574271 gaggtctatcagattttatagtgtaccaccaacaccggatttatttactttcttcttcttcttccctcatcctcatcttcattcaaccttcatcaatctt 18574172  T
Q  234 cttcatc 240  Q
    | |||||    
T  18574171 catcatc 18574165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 7628436 - 7628526
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatga-gaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    ||||||||||||||| ||||| ||||||||  | ||||||| ||||| |||| ||||  | |||| | |||||||||||||||||||||||    
T  7628436 caattttgataatttcaatcccctaaaaaaaaaagaccgttagattatggagatctaccagatttcacagtgtatcaccaacacctaattt 7628526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 29477912 - 29477954
Alignment:
Q  152 attttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  29477912 attttatggtgtatcaccaacacctgatttatttactttcttc 29477954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19788268 - 19788327
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtc 60  Q
    ||||||||| ||| |||||||||||||| || ||||| |||||||||||  |||||||||    
T  19788268 ccttaacttgtttcttttattcaatttgatctcataagttttaactttcataaacacgtc 19788327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29477780 - 29477827
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaacttt 48  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||    
T  29477780 ccttaacttatttcttttattcaatttggtctcataaatcttaacttt 29477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25138815 - 25138868
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaa 54  Q
    ||||||||||||| ||  ||||||||||||||| ||||||| |||| |||||||    
T  25138815 ccttaacttattttttcgattcaatttggtcccctaattttaaactgtctcaaa 25138868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 3000893 - 3000861
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  3000893 gtcccttaacttatttcttttattcaatttggt 3000861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 18230452 - 18230536
Alignment:
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||||||||| ||  |||| |||||| |||||| | ||||||  |||  |||| | |||||||||||||||||||||| ||||    
T  18230452 taattttaatccgcttgaaaaagagaccattggataaaggaggttcatatgatttaacagtgtatcaccaacacctaattaattt 18230536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 29477777 - 29477809
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  29477777 gtcccttaacttatttcttttattcaatttggt 29477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 28777784 - 28777589
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  28777784 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 28777685  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  28777684 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttctt 28777589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 31937056 - 31937251
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||  |||||| |||||||||    
T  31937056 ccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttcacttatttattttattcattttggtccaattttga 31937155  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  31937156 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttttttactttcttctt 31937251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 17116223 - 17116417
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17116223 ccttaacttatttcttttattcaatttggtctcataagtgttaagtttctcaaacacgtcccttaacttatttcttttattcaatttggttcaattttga 17116322  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| || | | ||||||||||||||||||||||||||||||| |||||||||||    
T  17116323 taattttaatcc-ctaaaaaatgacaccgttggattacggaggtccatcagagtttatagtgtatcaccaacacctaatttattcactttcttctt 17116417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 46903721 - 46903526
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  46903721 ccttaacttatttcttttattcaatttggtcccataaatcttaagtttttcaaacacgtcctttaacttatttcttttattcaatttggtacaattttga 46903622  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    | |||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  46903621 tgattttaatcccctaaaaaaaaagaccgttggattacggaggtctattagattttatagtgtatcaccaacacctaatttatttactttcttctt 46903526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 21729285 - 21729092
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  21729285 ccttaatttatttcttttattcaatttagtcccataagttctaactttctcaaacacgtcccttaacttatttcttttattcaatttgattcaattttga 21729186  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||  | |||||||||||||||| ||||||||||||||||||||||||||    
T  21729185 taattttaatcctctaaaaaatgagaccattggattatgaaggtctaccatattttatagtgtatcatcaacacctaatttatttactttcttc 21729092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 46902352 - 46902547
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  46902352 ccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtgcaattttga 46902451  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||| | ||||  ||| |||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||||    
T  46902452 taattttaatcccctaaaagaagagattgttagattacggaggtctatcagattttatagtgtatcactaacaccaaatttatttactttcttctt 46902547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 47431284 - 47431089
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||||||||| ||| ||||||| |||||||||    
T  47431284 ccttaatttatttcttttattcaatttggtctcataagttttaactttttcaaacacgttccttaacttatttcttttgttcaatttggtccaattttga 47431185  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  47431184 taattttaatcccctaaaaaaagagaccgttggattatggaggtctattagattttatagtgtatcacccacacctaatttatttactttcttctt 47431089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2233402 - 2233177
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||| |||| ||||| | |||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  2233402 ccttaacttatttcttttattcaattcggtctcataagtcttaactttgtcaaacatgtcccttaacttatttcttttattcaatttggtccaattttga 2233303  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||||||||||| |||| |||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||||   |    
T  2233302 taattttaatcctctaaaaaaagagatcgttggattatggagatctataagattttatagcgtatcaccaacacctaatttaattactttcttcttcttc 2233203  T
Q  201 tttcctcatcttcatgcaaccttcaa 226  Q
    || | |||||||||| || |||||||    
T  2233202 ttccatcatcttcattcatccttcaa 2233177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 23073469 - 23073276
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||| |  ||||||||||||||||    
T  23073469 ttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaagatgtcccttaacttatttcttttattcaaactggttcaattttgata 23073370  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| |||||||||| ||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  23073369 attttaatcccctaaaaaaagagaccgttgaattacggaggtgtatcaaattttacggtgtatcaccaacacctaatttatttactttcttctt 23073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 31938404 - 31938216
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |    
T  31938404 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttaa 31938305  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  31938304 taattttaatcccctaaaaaaagagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaattt-tttacttt 31938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 43394151 - 43393955
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttattt-cttttattccatttggttcaattttg 99  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||| |||||||||||||||||| ||||||||| | ||||| ||||||||    
T  43394151 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaagacgtcccttaacttattttcttttattcaaattggtccaattttg 43394052  T
Q  100 ataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  43394051 ataattttaaccccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttatttactttcttctt 43393955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 55209803 - 55209997
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||    
T  55209803 ccttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacgtcccttaatttatttcttttatttaatttggtccaattttga 55209902  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| | |||||| |||||| ||||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||| |||||    
T  55209903 taattttaatccacgaaaaaa-gagaccattggattacggaggtctatcagaatttatagtgtattaccaacacctaatttatttactttattctt 55209997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 35759328 - 35759114
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  35759328 ccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttggtccaattttga 35759229  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||    ||||||  |||||||||||||||| | |||||| | |||||| ||||||||||||||||||||||||||||||||||||||   |    
T  35759228 taattttaatctaaaaaaaaaacagaccgttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttcttcttc 35759129  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  35759128 ttccctcatcttcat 35759114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 52521948 - 52522161
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||| ||||||||||||| ||||  | ||||||||||||||||||||| || |||||||| |||||||| ||||||| |||||||||    
T  52521948 ccttaacttatttctttaattcaatttggtctcatagatcttaactttctcaaacacgtcctttcacttatttattttattcaatttggtccaattttga 52522047  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||| |||||||| ||||||||  |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||   |    
T  52522048 taactttaatcccctaaaaaa-aagacagttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 52522146  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  52522147 ttccctcatcttcat 52522161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 28776471 - 28776664
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    |||| |||||| |||||||||||||| ||| |||| | |||| ||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||    
T  28776471 ttaatttattttttttattcaatttgatcctataaatcttaattttctcaaacaagtcccttaactgatttcttttattcaatttggtccaattttgata 28776570  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||  |||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||    
T  28776571 attttaatcccctaaaaacagagaccgttggattacggaggtctatcagattttataatgtatcatcaacacctaatttatttactttcttctt 28776664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 37609344 - 37609537
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||| |||||||||  |||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| | ||||||| |||    
T  37609344 ttaacttatttcttttatttaatttggtcatataagtcttaactttctcaaacacgtccctcaacttatttcttttattcaatttgatccaattttaata 37609443  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||    
T  37609444 attttaatcccctaaaaaaagagaccgttggattagggaggtctataagatttaatagtgtctcatcaacacctaatttatttactttcttctt 37609537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 197
Target Start/End: Original strand, 21727934 - 21728127
Alignment:
Q  4 taacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataa 103  Q
    |||||||||| ||||||||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  21727934 taacttatttcttttattcaatttggtctcataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttgattcaattttgataa 21728033  T
Q  104 ttttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttcttt 197  Q
    ||||||||  ||||||||  |||| ||| ||||||| ||||||||   |||||||| ||||||||||||||||||||||||||| |||||||||    
T  21728034 ttttaatctcctaaaaaagtagactgttagattacgaaggtctatctcattttataatgtatcaccaacacctaatttatttaccttcttcttt 21728127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 17742390 - 17742211
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||    
T  17742390 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattttga 17742291  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattt-tatagtgtatcaccaacacctaat 179  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||| || ||||||||| |||||||||||    
T  17742290 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 17742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19043710 - 19043531
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||    
T  19043710 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattttga 19043611  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattt-tatagtgtatcaccaacacctaat 179  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||| || ||||||||| |||||||||||    
T  19043610 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 19043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 5689746 - 5689935
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||| ||||||| ||||||| |||||||||||||||  |||      | |||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  5689746 ccttagcttatttcttttattaaatttggtcccataagattt------cccaaacacgtcccttaacttatttcttttattaaatttggtccaattttga 5689839  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  5689840 taattttaatcctttaaaacaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacttaatttatttactttcttctt 5689935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 10979272 - 10979080
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| |||||||||||||||  || ||||||||||||||||| ||||| |||||||||||    
T  10979272 ccttaacttatttcttttattcaatttggtcccataaatcttaaatttctcaaacacgtcatttcacttatttcttttattcaatttgattcaattttga 10979173  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    |||||||| |||  | ||||| |||||| ||||||||||||||| ||| ||||||||  |||||||||||||| |||||||||||||||||||    
T  10979172 taattttagtccctttaaaaaagagaccattggattacggaggtttatcaaattttacggtgtatcaccaacatctaatttatttactttctt 10979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 52525456 - 52525261
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||| |||| || ||||||| |    
T  52525456 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcccttaacttatttcttttattcaatttagtccaattttaa 52525357  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttcttt 197  Q
    |||||||||||| |||||||| ||||||||||||||| | ||||  |||| |||||||| ||| ||||||||| ||||||| |||||||||||||||    
T  52525356 taattttaatcccctaaaaaaagagaccgttggattatgaaggttaataagattttataatgtgtcaccaacatctaattt-tttactttcttcttt 52525261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 17740891 - 17741046
Alignment:
Q  41 ttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacgg 140  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||| | |||||||||||||||||||||| ||||||  |||||||| |||||||||    
T  17740891 ttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattacgg 17740990  T
Q  141 aggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  17740991 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttctt 17741046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 19042211 - 19042366
Alignment:
Q  41 ttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacgg 140  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||| | |||||||||||||||||||||| ||||||  |||||||| |||||||||    
T  19042211 ttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattacgg 19042310  T
Q  141 aggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  19042311 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttctt 19042366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 53180900 - 53180718
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| || ||||| |  |||||||||||||||||| | ||||||||||| |||||||| |||| || ||||||| |    
T  53180900 ccttaacttattt-ttttattcaatttgatctcataagtcgtaactttctcaaacacgttctttaacttattttttttattcaatttagtccaattttaa 53180802  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatt 184  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  53180801 taattttaatcctctaaaaaaggagaccgttggattacggaggtctatcagattgtatagtgtatcaccaacacctaatttatt 53180718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 2232623 - 2232815
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||| ||||||||||| ||||||||||||||| ||||  | ||||||| |    
T  2232623 ccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaatacgtcccttaatttatttcttttattcaatttaatccaattttaa 2232722  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    |||||||||||| ||| ||||  ||||| ||||||||||||||||||| | ||||||  |||||||| |||||||||||||||||||||||||    
T  2232723 taattttaatcccctagaaaaaaagaccattggattacggaggtctatgagattttacggtgtatcagcaacacctaatttatttactttctt 2232815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 5691191 - 5691014
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||| ||| ||||| | |||| ||||||||||||||||||||||||||||||||||||  | ||| | |||||||||    
T  5691191 ccttaacttatttcttttattcaatttagtcacataagtcttaattttctcaaacacgtcccttaacttatttcttttattaaacttg-tccaattttga 5691093  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaat 179  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  5691092 taatttaaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaat 5691014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 54354488 - 54354308
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||| ||||| ||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  54354488 ccttaacctatttcttttatttaatttggtcccttaagtcttaactttctcaaacacgtcccttaacttatttctttgattcaatttggtccaattttga 54354389  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||| | ||| |||| |||||| ||||||||  ||||||||| | |||||| |||||||||||||||||||||||    
T  54354388 taattttaattccctataaaaagagaccattggattatagaggtctatcagattttacagtgtatcaccaacacctaattt 54354308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 54353046 - 54353221
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| |||||||||||||| |||||||| | |||||||| ||||||| |||||||||||||||||||||| || ||||||| ||||||| |||    
T  54353046 ttaacttatttcttttattcaatttgatcccataagtcttaactttatcaaacatgtcccttaacttatttcttttactcaatttggtccaatttttata 54353145  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaa 178  Q
    |||||||||| | |||||| ||||||||||||||||| |||||||| | ||||||| ||||||||| |||||||||    
T  54353146 attttaatccccgaaaaaaagagaccgttggattacgaaggtctatcagattttatcgtgtatcactaacacctaa 54353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 37610798 - 37610648
Alignment:
Q  63 ttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtg 162  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  37610798 ttaacttattttttttattcaatttggtccaattttgataattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtg 37610699  T
Q  163 tatcaccaacacctaatttatttactttcttctttccctttcctcatcttc 213  Q
    ||||||||||||||||||||||||||||||||||   ||| ||||||||||    
T  37610698 tatcaccaacacctaatttatttactttcttcttcttcttccctcatcttc 37610648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 47429648 - 47429838
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||| |||       |||||| ||| ||||||| |||||||||    
T  47429648 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccttta-------tcttttgttcaatttggtccaattttga 47429740  T
Q  101 taattttaatcctctaaaaaatga--gaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| ||||||||  |  ||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  47429741 taattttaatcccctaaaaaaaaaaagactgttggattacggaggtctattagattttatagtgtatcaccaacatctaatttatttactttcttctt 47429838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 11346833 - 11347026
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||| |||||||||  |||| | |||||||| |||||||||| |||||| ||||||||||||||| ||||| | |||||||||    
T  11346833 ccttaatttatttcttttatttaatttggtcatataaatcttaactttatcaaacacgtgccttaatttatttcttttattcaatttgttccaattttga 11346932  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||||||||| || ||||  |||||| |||||||| | |||||||  | ||| |||||||||||||||||||||||||||||||||||||||    
T  11346933 taattttaatcccctgaaaagagagaccattggattatgaaggtctaccatattgtatagtgtatcaccaacacctaatttatttactttcttc 11347026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 11348568 - 11348374
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||| ||| ||| || |||||||| ||||||||||||  ||||| | |||||||||    
T  11348568 ccttaacttatttcttttattcaatttggtctcataagtattaactttatcatacatgttccttaactaatttcttttatttaatttgatccaattttga 11348469  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |  || |||| |||||||||| ||||||||||||||| | |||||||||| ||||||| |||||||||| |||||||||||||||    
T  11348468 taattttaattccttagaaaaagagaccgttgaattacggaggtctatcagattttatagtatatcacc-acacctaattaatttactttcttctt 11348374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 50881206 - 50881020
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||  | ||||| | |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  50881206 ccttaacttatttcttttattcaatttgaccacataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttagttcaattttga 50881107  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    |||||||||||| ||||||||        |||||||| | |||||||  | ||||||||||||| ||||||||||||||||||||| |||||||    
T  50881106 taattttaatcccctaaaaaa-------attggattatgaaggtctaccatattttatagtgtaccaccaacacctaatttatttattttcttc 50881020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 53766063 - 53765876
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |    
T  53766063 ccttaacttatttcttttattcaatttggttccgtaagtcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttaa 53765964  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttact 188  Q
    |||||||||||| |||||||  || ||  ||||||||||||||||||  | |||||| |||||||||||| || || |||||||||||    
T  53765963 taattttaatcccctaaaaagagaaactattggattacggaggtctacgagattttacagtgtatcaccaccatctgatttatttact 53765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 47917708 - 47917515
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgat 101  Q
    |||||||||||| ||||||| ||||||||| ||||| | |||  |||||||||||||||||| |||||||||||||||||| ||||| |  |||||| ||    
T  47917708 cttaacttatttcttttatttaatttggtctcataaatcttagttttctcaaacacgtccct-aacttatttcttttattcaatttgatctaattttaat 47917610  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||| |||||||   |||  |||||||||||||||| ||| | |||||||||||||| ||||||||| ||||||||||||||| ||||    
T  47917609 aattttaatcccctaaaaataaagattgttggattacggaggtttatcagattttatagtgtattaccaacaccgaatttatttactttcctctt 47917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 35758082 - 35758220
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaatttta 157  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||   ||||||  | |||||||||||||| | |||||| | ||||||    
T  35758082 gtcccttaacttatttcttttattcaatttggtccaattttgataattttaatccaaaaaaaaaacaaaccgttggattacgaatgtctatcagatttta 35758181  T
Q  158 tagtgtatcaccaacacctaatttatttactttcttctt 196  Q
     ||||||||||||||||||||||||||||||||||||||    
T  35758182 cagtgtatcaccaacacctaatttatttactttcttctt 35758220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 55210945 - 55210810
Alignment:
Q  61 ccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatag 160  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||| || || |||| ||||||||| ||||| | ||||||||     
T  55210945 ccttaacttatttcttttattaaatttggatcaattttgataattttaatccactaaaaaaagatactgttgaattacggagatctatcagattttataa 55210846  T
Q  161 tgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||||| |||||||||||||||||||||    
T  55210845 tgtatcaccaacacataatttatttactttcttctt 55210810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 10978093 - 10978221
Alignment:
Q  68 ttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatca 167  Q
    ||||||||||||||| | || || ||||||| ||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  10978093 ttatttcttttattcaacttagtccaattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtgtatca 10978192  T
Q  168 ccaacacctaatttatttactttcttcttt 197  Q
    ||| |||||||||| |||||||||||||||    
T  10978193 ccatcacctaattt-tttactttcttcttt 10978221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 46986187 - 46986043
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||| | |||||  |||||||  ||||||||    
T  46986187 ccttaatttatttcttttattcaatttggtccaataagtcttaactctctcaaacacgtcccttaacttattt-tcttattaaatttggtcaaattttga 46986089  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctat 148  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||    
T  46986088 taattttaatcctttaaaaaa--agaccgttggattacggaggtctat 46986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 53764452 - 53764569
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| |||| ||  ||||||||||    
T  53764452 ttaacttattt-ttttattcaatttggtctcataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttagtcaaattttgata 53764550  T
Q  103 attttaatcctctaaaaaa 121  Q
    |||||||||| ||||||||    
T  53764551 attttaatcccctaaaaaa 53764569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 23091214 - 23091322
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||| |||||||    
T  23091214 ttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtctcttaacttaattcttttattcaatttggtccaactttgata 23091313  T
Q  103 attttaatc 111  Q
    |||||||||    
T  23091314 attttaatc 23091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 15290586 - 15290394
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||| |||||| || ||||| | |||| ||||||||||| |||  |||| ||||||| ||||||| ||||| | ||||||| |    
T  15290586 ccttaacttatttcttttatttaatttgatcacataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaa 15290487  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||||||| | |||||||  ||||| ||| |||| | |||||||  | |||||||||||||||| ||| |||||||||||||| |||||||    
T  15290486 taattttaatcatttaaaaaa-aagaccattgaattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttc 15290394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 50879782 - 50879922
Alignment:
Q  75 ttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacac 174  Q
    |||||||| |||| || |||||||||||||||||||||  || ||||  | | |||| |||||||||||||||| | |||||||||||||||||||||||    
T  50879782 ttttattcaattttgtccaattttgataattttaatcccatagaaaaaaaaatcgttagattacggaggtctatcagattttatagtgtatcaccaacac 50879881  T
Q  175 ctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    ||||||| ||| ||||||||||   ||||||||||||||||    
T  50879882 ctaatttgtttcctttcttcttcttctttcctcatcttcat 50879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 53178722 - 53178833
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| |  |||||   ||||||||||||||||||| |||||||||||||||||||||| ||||| | |||||||||    
T  53178722 ccttaacttattttttttattcaatttgatttcataagccttaactttctcaaacacgttccttaacttatttcttttattcaatttgatccaattttga 53178821  T
Q  101 taattttaatcc 112  Q
    | ||||||||||    
T  53178822 tcattttaatcc 53178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43392647 - 43392736
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  43392647 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatttggt 43392736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 33111837 - 33111747
Alignment:
Q  105 tttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||| |||||||| || | ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  33111837 tttaatcc-ctaaaaaaagatatcgttgtattacggaggtctataaaattttatagtgtatctcccacacctaatttatttactttcttctt 33111747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 50879515 - 50879594
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttat 80  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||| ||||||    
T  50879515 ccttaacttatttcttttattcaatttggtcccataaatcttaactttcttaaacacgtcccttaaattattttttttat 50879594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 17117496 - 17117387
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||| |||||||||||||||||||||  | ||| |||||||| ||||||   ||||||||    
T  17117496 ccttaacttatttcttttattcaatttggtctcataagtcttaagtttctcaaacacgtcccttaa--ttttttttttattcaatttgggcaaattttga 17117399  T
Q  101 taattttaatcc 112  Q
    | ||||||||||    
T  17117398 tgattttaatcc 17117387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 33113378 - 33113306
Alignment:
Q  39 ttttaactttctcaaacacgtcccttaacttatttc-ttttattccatttggttcaattttgataattttaat 110  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  33113378 ttttaactttttcaaacacgtcccttaacttatttctttttattcaatttggtccaattttgataattttaat 33113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 23072096 - 23072169
Alignment:
Q  16 tttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggt 90  Q
    |||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  23072096 tttattcaatttggtcccataagtcttaactttctcaaagacgt-ccttaacttatttcttttattcaatttggt 23072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34014529 - 34014596
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| || ||||||| ||||||||||    
T  34014529 ccttaacttatttcttttattcaatttggtcccataaatcttaactgtcgcaaacacatcccttaact 34014596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 43392766 - 43392841
Alignment:
Q  140 gaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    ||||||||| | ||||||||||||| |||||||||| |||||||||| |||||||||   ||| ||||||||||||    
T  43392766 gaggtctatcagattttatagtgtaccaccaacaccaaatttatttattttcttcttcttcttccctcatcttcat 43392841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 24376523 - 24376458
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||  || ||||||| ||||||||||    
T  24376523 ttaacttatttcttttattcaatttggtctcataagttttaacagtcacaaacacatcccttaact 24376458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 27750526 - 27750461
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    |||| |||||| ||||||||||||||||| ||||| |||||| ||| |||||||| ||||||||||    
T  27750526 ttaatttatttcttttattcaatttggtctcataagttttaattttttcaaacacatcccttaact 27750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 53764896 - 53764959
Alignment:
Q  126 accgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||| ||||||||||||||| | ||||||| ||||||||||||||| |||||| ||||||||    
T  53764896 accgttgaattacggaggtctatcagattttatggtgtatcaccaacacttaattt-tttacttt 53764959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 53101697 - 53101735
Alignment:
Q  155 ttatagtgtatcaccaacacctaatttatttactttctt 193  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  53101697 ttatagtgtatcaccaacacttaatttatttactttctt 53101735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 23072211 - 23072274
Alignment:
Q  152 attttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    ||||||||||||| | ||||||||  |||||||||||||||||||   ||| ||||||||||||    
T  23072211 attttatagtgtaccgccaacaccagatttatttactttcttcttcttcttccctcatcttcat 23072274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 53766066 - 53766032
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttc 92  Q
    ||||||||||||||||||||||||| |||||||||    
T  53766066 gtcccttaacttatttcttttattcaatttggttc 53766032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 55209800 - 55209834
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttc 92  Q
    ||||||||||||||||||||||||| |||||||||    
T  55209800 gtcccttaacttatttcttttattcaatttggttc 55209834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 10979275 - 10979243
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  10979275 gtcccttaacttatttcttttattcaatttggt 10979243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 11348571 - 11348539
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  11348571 gtcccttaacttatttcttttattcaatttggt 11348539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 17117499 - 17117467
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  17117499 gtcccttaacttatttcttttattcaatttggt 17117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23072140 - 23072172
Alignment:
Q  1 ccttaacttatttattttattcaatttggtccc 33  Q
    ||||||||||||| |||||||||||||||||||    
T  23072140 ccttaacttatttcttttattcaatttggtccc 23072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27749127 - 27749199
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttattt 73  Q
    ||||||||||| | ||||||||||||| ||| ||||| | |||||||||| ||||   |||||||||| ||||    
T  27749127 ccttaacttatgtcttttattcaatttagtcacataagtcttaactttcttaaacgtatcccttaactcattt 27749199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 31937053 - 31937085
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  31937053 gtcccttaacttatttcttttattcaatttggt 31937085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 31938407 - 31938375
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  31938407 gtcccttaacttatttcttttattcaatttggt 31938375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 34014526 - 34014558
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  34014526 gtcccttaacttatttcttttattcaatttggt 34014558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34015865 - 34015829
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataa 37  Q
    |||||| |||||| |||||||||||||||||||||||    
T  34015865 ccttaagttatttcttttattcaatttggtcccataa 34015829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 43392644 - 43392676
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  43392644 gtcccttaacttatttcttttattcaatttggt 43392676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 43394154 - 43394122
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  43394154 gtcccttaacttatttcttttattcaatttggt 43394122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 46902349 - 46902381
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  46902349 gtcccttaacttatttcttttattcaatttggt 46902381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 46903724 - 46903692
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  46903724 gtcccttaacttatttcttttattcaatttggt 46903692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 47429645 - 47429677
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  47429645 gtcccttaacttatttcttttattcaatttggt 47429677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 52525459 - 52525427
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  52525459 gtcccttaacttatttcttttattcaatttggt 52525427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 19228859 - 19229054
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | ||||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||    
T  19228859 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgttccttaactgatttcttttattcaatttggtccaattttga 19228958  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  19228959 taattttaatcccctaaaaaaagagaccgttggattacggaggtctattagattttatagtgtatcatcaacacctaatttatttactttcttctt 19229054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19230170 - 19229975
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  19230170 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttga 19230071  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  19230070 taattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcatcaacacttaatttatttactttcttctt 19229975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 12372335 - 12372549
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||| |||||||| ||||| | |||||||||    
T  12372335 ccttaacttatttgttttattcaatttggtctcataagtcttaactttctcaaacacgtctcttaacttatttgttttattcaatttgatccaattttga 12372434  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||| | ||||||||  | |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||   |    
T  12372435 taattttaataccctaaaaaaacataccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 12372534  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  12372535 ttccctcatcttcat 12372549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 39349503 - 39349696
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||    
T  39349503 ttaacttatttcttttattcaatttggttccataactcttaactttctcaaacacgtcctttaacttatttcttttactcaatttggttcaatttttata 39349602  T
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||| |||||||| | ||||||| |||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||    
T  39349603 attttaatcccctaaaaaaagtgaccgtttgattacggaggtctattagattttatcgtggatcaccaacacctaatttatttactttcttctt 39349696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 39350742 - 39350553
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||| |    
T  39350742 ccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttacttaatttggtccaattttta 39350643  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||| ||| ||||    
T  39350642 taattttaatcctctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttttttgcttt 39350553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 9083384 - 9083216
Alignment:
Q  10 atttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaa 109  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||    
T  9083384 atttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttttttattttattcaatttggtccaattttgataattttaa 9083285  T
Q  110 tcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaa 178  Q
    ||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  9083284 tcccctaaaaaaggagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaa 9083216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 13278328 - 13278133
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||  ||| ||||| | |||||||||    
T  13278328 ccttaatttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttttttacttcaatttgatccaattttga 13278229  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||  || |||| ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||    
T  13278228 taattttaatcccatagaaaaagagaccgttggattagggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttattctt 13278133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 18654317 - 18654500
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttatt-ccatttggttcaattttg 99  Q
    |||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||   ||||||| ||||||||    
T  18654317 ccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaaatttggtccaattttg 18654416  T
Q  100 ataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttat 183  Q
    || ||||||||||  | ||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  18654417 atcattttaatcccattaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttat 18654500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 9082000 - 9082181
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||||| |||| |||||||||||||| | |||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  9082000 ccttaactcatttcttttattcaatttgattccataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 9082099  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattta 182  Q
    |||||||||||| ||| |||||||||||||||||| ||||| |||||| | |||||||||| |||| | |||||||||||||    
T  9082100 taattttaatcccctagaaaatgagaccgttggatcacggatgtctatcagattttatagtatatcgctaacacctaattta 9082181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 39164091 - 39164288
Alignment:
Q  15 ttttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctc 114  Q
    ||||||||||||| ||| ||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |    
T  39164091 ttttattcaatttagtctcataagtcttaactttatcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgat-attttaatcc-c 39164188  T
Q  115 taaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttca 214  Q
    | |||||  |||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||    
T  39164189 ttaaaaaaaagactgttgaattacggaggcctatcaaattttatagtgtatcaccaacacctaatttatttacttttttc-ttctttttcctcatcttca 39164287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 18655749 - 18655566
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||    
T  18655749 ccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttggtccaactttga 18655650  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatt 184  Q
    |||||||||||| |||||||| |||||||||| |||||| | |||||| | ||||||  ||||||||||||||  |||||||||    
T  18655649 taattttaatcccctaaaaaaagagaccgttgaattacgaaagtctatcagattttacggtgtatcaccaacaattaatttatt 18655566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 6803721 - 6803508
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||| ||||||||| ||||| | |||| ||||||||||| ||  ||||||||||||||||||||| ||||||| |||||||||    
T  6803721 ccttaatttatttcttttatttaatttggtcacataagtcttaattttctcaaacatgtttcttaacttatttcttttattcaatttggtccaattttga 6803622  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    ||||||||||||| |||||||  |||||||| ||||||  | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||   |    
T  6803621 taattttaatcctttaaaaaaacagaccgttagattac-aaagtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttc 6803523  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  6803522 ttccctcatcttcat 6803508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 12373816 - 12373603
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgata 102  Q
    ||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  12373816 ttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttattttattcaatttggtccaattttgata 12373717  T
Q  103 attttaatc----ctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttc 198  Q
    |||||||||        ||||||  |||||||||||||||| | |||||| | |||||| | ||||||||||||||||||||||||||||||||||||      
T  12373716 attttaatcaaaaaaaaaaaaaaacagaccgttggattacgaatgtctatcagattttacactgtatcaccaacacctaatttatttactttcttctt-- 12373619  T
Q  199 cctttcctcatcttcat 215  Q
     ||| ||||||||||||    
T  12373618 -cttccctcatcttcat 12373603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 13276840 - 13277026
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  13276840 ccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttggtcaaattttga 13276939  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttct 195  Q
    ||||||||||||  |||||||  ||||||||||||||||||||| ||| | ||||||        ||||||||||||||||||||||||||||||    
T  13276940 taattttaatcccttaaaaaaaaagaccgttggattacggaggtgtatcacatttta--------caccaacacctaatttatttactttcttct 13277026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 4031903 - 4032039
Alignment:
Q  62 cttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagt 161  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||  | ||||||||||    
T  4031903 cttaacttatttcttttattcaatttagtccaattttgataattttaatccactaaaaaaagagaccgttgaattacggaagtctaccagattttatagt 4032002  T
Q  162 gtatcaccaacacctaatt--tatttactttcttctt 196  Q
    |||||||||||||||||||  ||||||||||||||||    
T  4032003 gtatcaccaacacctaatttatatttactttcttctt 4032039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 4033060 - 4032927
Alignment:
Q  63 ttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtg 162  Q
    ||||||||||| |||||||  | ||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||| ||    
T  4033060 ttaacttattttttttatttaacttggtccaattttaataattttaatccactaaaaaaagagaccgttggattacggaggtctatcagattttataatg 4032961  T
Q  163 tatcaccaacacctaatttatttactttcttctt 196  Q
    |||||  |||||||| ||||||||||||||||||    
T  4032960 tatcattaacacctagtttatttactttcttctt 4032927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8447098 - 8447185
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttg 88  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8447098 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttg 8447185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6801995 - 6802075
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttatt 81  Q
    ||||||||||||| |||| || ||||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  6801995 ccttaacttatttcttttttttaatttggtctcataagtcttaattttctcaaacacgtcccttaacttatttcttttatt 6802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 35952531 - 35952464
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaactta 70  Q
    ||||||||||| ||||||||||||||||| ||||| | |||||||| |||||| ||||||||||||||    
T  35952531 ttaacttatttcttttattcaatttggtctcataaatcttaactttgtcaaacgcgtcccttaactta 35952464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 42962122 - 42962232
Alignment:
Q  84 atttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttat 183  Q
    ||||||| | |||||  ||||||||| ||||| |||||  |||||||||||| | |||||||||||| || | || |||||||||||||||||||||       
T  42962122 atttggtcctattttattaattttaaacctctcaaaaagaagaccgttggataaaggaggtctataagatctaatggtgtatcaccaacacctaattata 42962221  T
Q  184 ttactttcttc 194  Q
    |||||||||||    
T  42962222 ttactttcttc 42962232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 3944750 - 3944662
Alignment:
Q  62 cttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataa 150  Q
    |||||||||||  |||||||  ||||| | ||||||| ||||||||||| |  ||||||| | |||| |||||||||||| ||||||||    
T  3944750 cttaacttattatttttatttaatttgatccaattttaataattttaataccataaaaaaagtgaccattggattacggaagtctataa 3944662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 14356562 - 14356662
Alignment:
Q  116 aaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattta-tttactttcttctttccctttcctcatcttca 214  Q
    |||||| |||||| |||||| |  ||||||||| | || | || ||||||||||||||||| ||||| |||||||||||| |   |||||||||||||||    
T  14356562 aaaaaaagagaccattggatgaatgaggtctatcacatctaattgtgtatcaccaacacctgatttattttactttcttcatcttctttcctcatcttca 14356661  T
Q  215 t 215  Q
    |    
T  14356662 t 14356662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12373758 - 12373727
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  12373758 ccttaacttatttattttattcaatttggtcc 12373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 30674829 - 30674746
Alignment:
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    ||||||||||  |||||||| |||||||||| || | |||||||| ||| || | |   |||||||||||||||||||||||||    
T  30674829 aattttaatctcctaaaaaaggagaccgttgaataaaggaggtctgtaagatctaaccatgtatcaccaacacctaatttattt 30674746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 8447095 - 8447127
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  8447095 gtcccttaacttatttcttttattcaatttggt 8447127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 13276837 - 13276869
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  13276837 gtcccttaacttatttcttttattcaatttggt 13276869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 16602746 - 16602941
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||    
T  16602746 ccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttatttaaattggtccaattttga 16602845  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||   ||||||  |||||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  16602846 taattttaatccctaaaaaaaaaagaccgttggattacggatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttctt 16602941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27892433 - 27892219
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||    
T  27892433 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcagacacgtcccttaacttatttcttttattcaatttgatccaattttga 27892334  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccc 200  Q
    |||||||||||    ||||||  |||||||| ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| || ||   |    
T  27892333 taattttaatcaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttttttttcttc 27892234  T
Q  201 tttcctcatcttcat 215  Q
    || ||||||||||||    
T  27892233 ttccctcatcttcat 27892219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 38244052 - 38243857
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||| |||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  38244052 ccttaatttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 38243953  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    |||||||||||  |||||||| || || ||||||||||  |||| ||||| |||||| ||||||| ||||||||| ||||||||||||||||||||    
T  38243952 taattttaatctcctaaaaaaagatactgttggattacaaaggtgtataagattttacagtgtattaccaacaccaaatttatttactttcttctt 38243857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 23832989 - 23833165
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||| ||| |||||||| |||| || |||||||||    
T  23832989 ccttaacttatttattttattccatttggtcccataagtcttaactttctcaaacacgtcc-ttaacttttttattttattcaatttagtccaattttga 23833087  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaa 178  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  23833088 taattttaatcccctaaaaaagaagaccgttggattacggaggtctagaagattttatagtgtatcatcaacacctaa 23833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 27891127 - 27891322
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  27891127 ccttaacttatttcttttattcaatttggtctcataggtcttaactttctcaaacacgtcccttaacttatttcttttattcattttggttcaattttga 27891226  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||     ||||||  |||||||| ||||||| | |||||| | |||||  ||||||||||||||||||||||||||||||||||||||    
T  27891227 taattttaataaaaaaaaaaaacagaccgttagattacgaatgtctatcagattttccagtgtatcaccaacacctaatttatttactttcttctt 27891322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 26388240 - 26388395
Alignment:
Q  2 cttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgat 101  Q
    |||||||||||| |||||||||||||| || ||||| | ||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  26388240 cttaacttattttttttattcaatttgatctcataagtcttaactttctcaaacacgtcctttaacttatttcttttatttaatttgattcaattttgat 26388339  T
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaatttta 157  Q
    |||||||||||  || ||||  |||||||| |||||||||||||||| | ||||||    
T  26388340 aattttaatcccatataaaaaaagaccgtttgattacggaggtctatcagatttta 26388395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 38242943 - 38243098
Alignment:
Q  40 tttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacg 139  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||  ||||| | ||||||||||||||||||||  |||||||| ||||||||||||||||     
T  38242943 tttaactttttcaaacatgtctcttaacttatttcttttatttaatttgatccaattttgataattttaatctcctaaaaaaagagaccgttggattaca 38243042  T
Q  140 gaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttc 198  Q
     ||   ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  38243043 aag---tataagattttataatgtatcaccaacaccaaatttatttactttcttctttc 38243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16604286 - 16604197
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| |||||||| ||||||||| |||||||||||||||||| |||||||    
T  16604286 ccttaacttatttcttttattcaatttggtcccataagtcttaagtttctcaagcacgtccctgaacttatttcttttattcaatttggt 16604197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43814542 - 43814629
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttg 88  Q
    ||||||||||||| ||||||||||||| ||| ||||| | |||||||||||||| |||||| |||||||||||||||||||| |||||    
T  43814542 ccttaacttatttcttttattcaatttcgtctcataagtcttaactttctcaaatacgtcctttaacttatttcttttattcaatttg 43814629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23833967 - 23833898
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaactta 70  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  23833967 ccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaactta 23833898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 5033501 - 5033566
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  5033501 ttaacttatttcttttattcaatttggtcctataacttttaactttctcaaatacatcccttaact 5033566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 370885 - 370976
Alignment:
Q  103 attttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||| |||||||||||| |||||||||||| |  ||||||||| |||| | || |||||||||||||||||||||   |||||||||||    
T  370885 attttaaacctctaaaaaataagaccgttggataaatgaggtctatcaaatctaatggtgtatcaccaacacctaattatattactttcttc 370976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 5034911 - 5034846
Alignment:
Q  3 ttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    ||||||||||| ||||||| |||||||| | |||| ||||||||||||||||||| ||||||||||    
T  5034911 ttaacttatttcttttatttaatttggttctataacttttaactttctcaaacacatcccttaact 5034846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 15496083 - 15496133
Alignment:
Q  18 tattcaatttggtcccataatttttaactttctcaaacacgtcccttaact 68  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  15496083 tattcaatttggtcccataagtcttaactttcacaaacacgtcccttaact 15496133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 44800984 - 44801073
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||||||  ||||| ||  | |||| | |||||||||||||||||| ||||    
T  44800984 caattttgataatttcaatcccctaaaaaacaagaccgttggattatagaggtttaccagatttcacagtgtatcaccaacacctgattt 44801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 5033631 - 5033673
Alignment:
Q  152 attttatagtgtatcaccaacacctaatttatttactttcttc 194  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  5033631 attttatagtgtatcaccaacatttaatttatttactttcttc 5033673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19577423 - 19577359
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtccctta 65  Q
    ||||||||||||| ||||| ||||||||||||||||| | ||||||||  |||| || |||||||    
T  19577423 ccttaacttatttcttttagtcaatttggtcccataactcttaactttaacaaagacatccctta 19577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 16604155 - 16604092
Alignment:
Q  152 attttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    ||||||||||||| |||||||||   |||||||||||||||||||   ||| ||||||||||||    
T  16604155 attttatagtgtaccaccaacactggatttatttactttcttcttcttcttccctcatcttcat 16604092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 16604289 - 16604257
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  16604289 gtcccttaacttatttcttttattcaatttggt 16604257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 23832986 - 23833018
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    |||||||||||||||| ||||||||||||||||    
T  23832986 gtcccttaacttatttattttattccatttggt 23833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 27891124 - 27891156
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  27891124 gtcccttaacttatttcttttattcaatttggt 27891156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 27892436 - 27892404
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  27892436 gtcccttaacttatttcttttattcaatttggt 27892404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 35382 - 35202
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||| |    
T  35382 ccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccaattttta 35283  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  35282 taattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 35202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 31054 - 31234
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||| || ||||||| || |||| |    
T  31054 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccagttttta 31153  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  31154 taattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattt 31234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 31051 - 31083
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  31051 gtcccttaacttatttcttttattcaatttggt 31083  T

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Target: scaffold0141; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 35385 - 35353
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  35385 gtcccttaacttatttcttttattcaatttggt 35353  T

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Target: scaffold0049 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 79430 - 79610
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||| |    
T  79430 ccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccaattttta 79529  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  79530 taattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 79610  T

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Target: scaffold0049; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 83758 - 83578
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||| || ||||||| || |||| |    
T  83758 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccagttttta 83659  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaattt 181  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  83658 taattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattt 83578  T

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Target: scaffold0049; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 79427 - 79459
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  79427 gtcccttaacttatttcttttattcaatttggt 79459  T

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Target: scaffold0049; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 83761 - 83729
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  83761 gtcccttaacttatttcttttattcaatttggt 83729  T

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Target: scaffold0878 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 3124 - 2934
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3124 ccttaacttatttcttttattcaatttggtcccataagtcttaactttctcagacacgtcccttaacttatttcttttattcaatttggtccaattttga 3025  T
Q  101 taattttaatcc-tctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||||||||    ||||||  |||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  3024 taattttaatccaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 2934  T

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Target: scaffold0878; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 58 - 215
Target Start/End: Original strand, 1847 - 2003
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttcaattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaatttta 157  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||   |||||   |||||||| ||||||| | |||||| | |||||     
T  1847 gtcccttaacttatttcttttattcaatttggtccaatttt-ataattttaatccaaaaaaaatatagaccgttagattacgaatgtctattagattttc 1945  T
Q  158 tagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
     ||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||    
T  1946 cagtgtatcaccaacacctaatttatttactttcttcttcttcttccctcatcttcat 2003  T

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Target: scaffold0878; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 3127 - 3095
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  3127 gtcccttaacttatttcttttattcaatttggt 3095  T

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Target: scaffold1425 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 1698 - 1503
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||| |||| ||||||| ||||||| ||||||| |||||||||    
T  1698 ccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcctttaatttatttcctttattcaatttggtccaattttga 1599  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctt 196  Q
    ||||||||||||  |||||||  ||||||||||||||  ||||||||| | ||||||  |||||| ||||||||||||||| ||||||||||||||    
T  1598 taattttaatcccttaaaaaaacagaccgttggattatagaggtctatcagattttacggtgtataaccaacacctaatttttttactttcttctt 1503  T

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Target: scaffold1425; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 155 - 343
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||| |||| ||||||| ||||||| |||||||  ||||||||    
T  155 ccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcctttaatttatttcctttattcaatttggtcaaattttga 254  T
Q  101 taattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    |||||||||| |  ||||||| |||||||||||||||| ||||||||| | |||||| || |||||||||||||||||||| ||||||||    
T  255 taattttaattccttaaaaaaagagaccgttggattacagaggtctatcagattttacagcgtatcaccaacacctaattt-tttacttt 343  T

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Target: scaffold1425; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 1701 - 1667
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggttc 92  Q
    ||||||||||||||||||||||||| |||||||||    
T  1701 gtcccttaacttatttcttttattcaatttggttc 1667  T

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Target: scaffold0018 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 25442 - 25252
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattccatttggttcaattttga 100  Q
    ||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||    
T  25442 ccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttttattaaatttggtccaattttga 25343  T
Q  101 taattttaatcctctaaaaaatga-gaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttacttt 190  Q
    ||||||||||| | ||||| | || ||| |||||||||||||||| ||| | |||||||||||||| | ||||||||||||||||||||||    
T  25342 taattttaatcatttaaaacaagaggacagttggattacggaggtttatcacattttatagtgtattatcaacacctaatttatttacttt 25252  T

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Target: scaffold0349 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 9270 - 9363
Alignment:
Q  92 caattttgataattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattta 186  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  9270 caattttgatgattttaatcccctaaaaaa-gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 9363  T

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Target: scaffold0026 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 104322 - 104403
Alignment:
Q  1 ccttaacttatttattttattcaatttggtcccataatttttaactttctcaaacacgtcccttaacttatttcttttattc 82  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  104322 ccttaacttatttcttttattcaatttggtcccataagttttaacattctcaaacacgtcccttaacttatttcttttattc 104403  T

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Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 104405 - 104486
Alignment:
Q  134 attacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttcttctttccctttcctcatcttcat 215  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||   ||| ||||||||||||    
T  104405 attacggaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttcttccctcatcttcat 104486  T

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Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 104319 - 104351
Alignment:
Q  58 gtcccttaacttatttcttttattccatttggt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  104319 gtcccttaacttatttcttttattcaatttggt 104351  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 22465 - 22351
Alignment:
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttatttactttct-tctttccc 200  Q
    |||||||||||| |||||||  ||||||| |||| | | ||||||| || || | |  |||||||| |||||| |||||| |||||||| | ||||||      
T  22465 aattttaatcctataaaaaagaagaccgtcggataaagaaggtctacaagatctaacggtgtatcatcaacacataatttttttactttttctctttctt 22366  T
Q  201 tttcctcatcttcat 215  Q
    |||||||||||||||    
T  22365 tttcctcatcttcat 22351  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 43003 - 42923
Alignment:
Q  102 aattttaatcctctaaaaaatgagaccgttggattacggaggtctataaaattttatagtgtatcaccaacacctaatttattt 185  Q
    |||||||||||||  ||||  ||||||||||||| |   ||||| || | |||| | |||||||||||||||||||||||||||    
T  43003 aattttaatcctccgaaaatggagaccgttggataa---aggtccatgagatttaacagtgtatcaccaacacctaatttattt 42923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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