View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20926_high_28 (Length: 294)
Name: NF20926_high_28
Description: NF20926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20926_high_28 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 38 - 294
Target Start/End: Original strand, 9169349 - 9169605
Alignment:
| Q |
38 |
tattagaaagagagtgttcctaacactttcttcgagccatacttatataccggattattattcataaagcaacacgtatctaaggacaaaatttatttct |
137 |
Q |
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| T |
9169349 |
tattaaaaaaagagtgttcctaacactttcttcgagccatacatatataccggattattattcgtaaagcaacacgtatctaaggacaaaatttatttct |
9169448 |
T |
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| Q |
138 |
tgccgtccacagataatgagaagtcttttagccttcgttcttgaatttcacctgtataagttaattattaaggacaaaattgtagttgttgacttgttat |
237 |
Q |
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| T |
9169449 |
tgccgtccacggataatgagaaatcttttagccttcgttcttgaatttcacctgtataagttaattattaaggacaaaattgtagttgttgacttgttat |
9169548 |
T |
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| Q |
238 |
atgtgaaaattttgtcgtgatggtcttggacttggatgattcttaatctatacttat |
294 |
Q |
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| T |
9169549 |
atgtgaaaattttgtagtgatggtcttggacttggatgatttttaatctatacttat |
9169605 |
T |
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