View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20926_high_38 (Length: 244)
Name: NF20926_high_38
Description: NF20926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20926_high_38 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 24049127 - 24048886
Alignment:
| Q |
4 |
agagagatgaaaagggagaaagaatacaaaaagaattcttccttaaaatcacttgactgtaacaagtttcatagaacataagctacaaaataacnnnnnn |
103 |
Q |
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| T |
24049127 |
agagaaatgaaaagggagaaagaatacaaaaagaattcttccttaaaatcacttgactgtaacaagtttcatagaacataagctacaaaataactttttt |
24049028 |
T |
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| Q |
104 |
ngcattaacatatcttttaagctaagtacttttcaaccttctccacttcctctgtgctcccaatgtacagtggaacacgttgatgaatctgt-ccaaata |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
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| T |
24049027 |
tgcattaacatatcttttaagctaagtacttttcaaccttctccacttcctctgtgctcccaatgtacagtggaacacgttgatgaatctgtcccaaaaa |
24048928 |
T |
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| Q |
203 |
aaaaaggaagaattgaataagagtatccaaaataacatttat |
244 |
Q |
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||||||||| ||||||||||||||||||| ||||||||||| |
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| T |
24048927 |
aaaaaggaaaaattgaataagagtatccatcataacatttat |
24048886 |
T |
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