View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20928_low_12 (Length: 220)

Name: NF20928_low_12
Description: NF20928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20928_low_12
NF20928_low_12
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-207)||(16315-16521)
[»] chr2 (23 HSPs)
chr2 (1-207)||(20309141-20309347)
chr2 (1-207)||(37995-38202)
chr2 (1-207)||(23285898-23286103)
chr2 (1-207)||(298693-298903)
chr2 (1-207)||(22731113-22731322)
chr2 (1-207)||(22738059-22738267)
chr2 (1-207)||(23654265-23654474)
chr2 (1-205)||(22337148-22337355)
chr2 (1-186)||(23076475-23076663)
chr2 (1-134)||(23103348-23103483)
chr2 (1-195)||(23060546-23060742)
chr2 (6-207)||(23660061-23660264)
chr2 (54-143)||(40622151-40622244)
chr2 (120-200)||(27753730-27753810)
chr2 (1-81)||(22105442-22105524)
chr2 (2-143)||(23708562-23708706)
chr2 (1-85)||(7735-7821)
chr2 (1-40)||(7679618-7679657)
chr2 (1-40)||(25175883-25175922)
chr2 (1-40)||(23071998-23072037)
chr2 (1-40)||(28406009-28406048)
chr2 (1-81)||(32214972-32215053)
chr2 (1-41)||(23207310-23207350)
[»] chr7 (31 HSPs)
chr7 (1-207)||(40443424-40443631)
chr7 (1-207)||(27847712-27847918)
chr7 (1-207)||(10589072-10589280)
chr7 (1-207)||(12698864-12699074)
chr7 (1-200)||(9509222-9509424)
chr7 (1-200)||(16386133-16386336)
chr7 (6-207)||(26212034-26212238)
chr7 (1-180)||(18456319-18456500)
chr7 (1-207)||(38227514-38227722)
chr7 (1-207)||(3564243-3564452)
chr7 (66-143)||(17138006-17138083)
chr7 (66-142)||(12187113-12187189)
chr7 (1-85)||(48273422-48273508)
chr7 (1-85)||(2280121-2280207)
chr7 (4-87)||(16219717-16219802)
chr7 (1-81)||(13647358-13647440)
chr7 (1-40)||(67778-67817)
chr7 (1-40)||(16495435-16495474)
chr7 (1-40)||(28505347-28505386)
chr7 (1-40)||(34200819-34200858)
chr7 (1-40)||(44014211-44014250)
chr7 (1-85)||(22072946-22073033)
chr7 (1-40)||(811180-811219)
chr7 (1-40)||(12255842-12255881)
chr7 (1-44)||(12901356-12901399)
chr7 (1-40)||(18005679-18005718)
chr7 (1-40)||(47831840-47831879)
chr7 (21-86)||(2530139-2530205)
chr7 (1-85)||(16056361-16056446)
chr7 (1-81)||(24275201-24275282)
chr7 (1-41)||(48991213-48991253)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-207)||(1322-1528)
scaffold0106 (1-207)||(7299-7505)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-206)||(13530-13736)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-207)||(32100-32306)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-207)||(931-1137)
[»] chr8 (34 HSPs)
chr8 (1-207)||(31971290-31971497)
chr8 (1-207)||(16199525-16199732)
chr8 (1-186)||(21389353-21389538)
chr8 (1-181)||(21395888-21396068)
chr8 (1-181)||(21790381-21790561)
chr8 (1-168)||(21778697-21778864)
chr8 (1-207)||(45130877-45131084)
chr8 (1-207)||(21918879-21919088)
chr8 (1-207)||(20536241-20536450)
chr8 (1-207)||(28648923-28649132)
chr8 (1-209)||(18818286-18818497)
chr8 (1-197)||(18879126-18879319)
chr8 (1-207)||(22626769-22626977)
chr8 (1-206)||(21923808-21924016)
chr8 (1-196)||(16092231-16092430)
chr8 (1-181)||(22875098-22875281)
chr8 (104-207)||(25363019-25363123)
chr8 (1-207)||(6759291-6759498)
chr8 (1-181)||(7372811-7372986)
chr8 (1-181)||(23406412-23406597)
chr8 (41-207)||(23648628-23648795)
chr8 (1-81)||(17140949-17141031)
chr8 (1-84)||(6520401-6520486)
chr8 (1-40)||(5866323-5866362)
chr8 (1-85)||(21285630-21285716)
chr8 (1-40)||(21491028-21491067)
chr8 (1-40)||(23760893-23760932)
chr8 (1-40)||(38855300-38855339)
chr8 (1-143)||(20498595-20498740)
chr8 (1-40)||(983455-983494)
chr8 (1-40)||(26355747-26355786)
chr8 (1-81)||(14409495-14409576)
chr8 (1-81)||(16413367-16413448)
chr8 (1-41)||(19154935-19154975)
[»] chr4 (32 HSPs)
chr4 (1-207)||(14053181-14053389)
chr4 (1-205)||(17046520-17046724)
chr4 (1-207)||(12902790-12902999)
chr4 (1-205)||(7088910-7089117)
chr4 (1-200)||(44052862-44053064)
chr4 (1-207)||(22636468-22636676)
chr4 (1-207)||(23374238-23374447)
chr4 (1-207)||(16377402-16377609)
chr4 (1-177)||(16270145-16270323)
chr4 (1-207)||(16239849-16240057)
chr4 (1-200)||(7893736-7893935)
chr4 (94-207)||(3096772-3096885)
chr4 (1-207)||(14038681-14038890)
chr4 (1-143)||(7798807-7798952)
chr4 (54-142)||(15121747-15121834)
chr4 (104-207)||(17047951-17048055)
chr4 (1-87)||(52873367-52873455)
chr4 (1-84)||(12288211-12288298)
chr4 (1-143)||(52243137-52243284)
chr4 (1-137)||(6899924-6900062)
chr4 (1-85)||(13853-13939)
chr4 (1-40)||(12774040-12774079)
chr4 (1-40)||(15551850-15551889)
chr4 (1-40)||(39706337-39706376)
chr4 (21-86)||(43256161-43256227)
chr4 (3-40)||(8846391-8846428)
chr4 (1-85)||(54798756-54798842)
chr4 (1-44)||(3096326-3096368)
chr4 (1-85)||(14280346-14280431)
chr4 (1-81)||(18215325-18215406)
chr4 (1-85)||(44928926-44929012)
chr4 (1-33)||(43198611-43198643)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-207)||(10305-10511)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-207)||(4745-4953)
scaffold0358 (43-207)||(13-177)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-207)||(5010-5216)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-207)||(51615-51821)
[»] chr6 (25 HSPs)
chr6 (1-207)||(16920512-16920718)
chr6 (1-207)||(22831536-22831744)
chr6 (1-207)||(11185538-11185744)
chr6 (1-207)||(20360839-20361048)
chr6 (1-140)||(35245619-35245758)
chr6 (1-200)||(20638169-20638371)
chr6 (1-207)||(29060573-29060782)
chr6 (1-209)||(18409704-18409915)
chr6 (1-186)||(19303441-19303628)
chr6 (1-179)||(20593806-20593987)
chr6 (1-207)||(25629234-25629443)
chr6 (1-207)||(22780106-22780315)
chr6 (1-207)||(17287675-17287884)
chr6 (1-132)||(16496277-16496411)
chr6 (1-132)||(20076733-20076863)
chr6 (21-140)||(27415887-27416008)
chr6 (1-143)||(25644353-25644499)
chr6 (1-40)||(27333267-27333306)
chr6 (1-40)||(27394007-27394046)
chr6 (1-131)||(22782257-22782389)
chr6 (1-68)||(25656659-25656727)
chr6 (1-40)||(9098563-9098602)
chr6 (1-40)||(19652228-19652267)
chr6 (1-85)||(20109171-20109257)
chr6 (1-81)||(1595579-1595660)
[»] chr1 (25 HSPs)
chr1 (1-207)||(38801270-38801476)
chr1 (1-184)||(27250631-27250817)
chr1 (1-207)||(21026713-21026922)
chr1 (1-207)||(50210092-50210301)
chr1 (43-206)||(22354452-22354616)
chr1 (1-207)||(34509813-34510022)
chr1 (7-206)||(22532308-22532510)
chr1 (104-181)||(48603652-48603730)
chr1 (41-181)||(20135262-20135403)
chr1 (94-200)||(22356060-22356168)
chr1 (94-200)||(22357746-22357854)
chr1 (1-85)||(21896258-21896344)
chr1 (1-143)||(21861513-21861658)
chr1 (1-68)||(20847173-20847242)
chr1 (1-40)||(21754078-21754117)
chr1 (1-40)||(22921918-22921957)
chr1 (21-140)||(33797573-33797694)
chr1 (1-117)||(35261051-35261166)
chr1 (1-81)||(45574893-45574975)
chr1 (1-40)||(14295600-14295639)
chr1 (1-40)||(16758682-16758721)
chr1 (1-40)||(20918637-20918676)
chr1 (1-40)||(33681040-33681079)
chr1 (1-40)||(52928019-52928058)
chr1 (4-85)||(22237663-22237746)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-207)||(15344-15551)
scaffold0114 (54-142)||(7378-7465)
[»] chr5 (34 HSPs)
chr5 (1-207)||(21292849-21293057)
chr5 (1-207)||(8286721-8286931)
chr5 (1-200)||(23390382-23390584)
chr5 (3-207)||(22075054-22075261)
chr5 (1-207)||(24493602-24493810)
chr5 (1-143)||(37723936-37724080)
chr5 (1-207)||(9077985-9078194)
chr5 (1-207)||(13025344-13025552)
chr5 (1-207)||(13095528-13095736)
chr5 (1-207)||(25421565-25421774)
chr5 (1-207)||(24529253-24529462)
chr5 (1-206)||(25431427-25431635)
chr5 (103-205)||(22107254-22107357)
chr5 (1-132)||(21808343-21808477)
chr5 (1-207)||(1096500-1096709)
chr5 (66-142)||(23572178-23572254)
chr5 (66-143)||(18769947-18770024)
chr5 (1-132)||(21729018-21729152)
chr5 (66-143)||(22032415-22032492)
chr5 (21-140)||(20910745-20910866)
chr5 (21-140)||(18356367-18356488)
chr5 (1-84)||(20026942-20027029)
chr5 (1-141)||(18418613-18418753)
chr5 (1-84)||(21329500-21329585)
chr5 (104-207)||(21986026-21986130)
chr5 (1-68)||(21997553-21997622)
chr5 (4-85)||(22412220-22412302)
chr5 (1-40)||(19660884-19660923)
chr5 (1-132)||(22144082-22144216)
chr5 (1-40)||(22959581-22959620)
chr5 (1-83)||(21565575-21565659)
chr5 (125-180)||(22412333-22412388)
chr5 (1-40)||(36314610-36314649)
chr5 (1-87)||(21502156-21502244)
[»] scaffold0064 (1 HSPs)
scaffold0064 (4-207)||(47031-47228)
[»] chr3 (36 HSPs)
chr3 (1-200)||(20698322-20698523)
chr3 (1-200)||(13442307-13442509)
chr3 (1-200)||(17487889-17488091)
chr3 (1-207)||(12399242-12399451)
chr3 (6-207)||(14576712-14576915)
chr3 (1-200)||(17499371-17499573)
chr3 (1-207)||(14972887-14973096)
chr3 (4-207)||(18438570-18438776)
chr3 (1-195)||(43840965-43841162)
chr3 (1-181)||(26686920-26687103)
chr3 (1-180)||(24153115-24153296)
chr3 (1-207)||(14572622-14572830)
chr3 (4-207)||(40213600-40213805)
chr3 (1-206)||(23083241-23083449)
chr3 (104-207)||(16796685-16796789)
chr3 (104-181)||(14179570-14179648)
chr3 (4-206)||(25476265-25476470)
chr3 (1-186)||(42386443-42386632)
chr3 (1-207)||(11424642-11424847)
chr3 (66-136)||(856234-856304)
chr3 (1-143)||(52523670-52523817)
chr3 (1-40)||(12174308-12174347)
chr3 (1-85)||(15470957-15471043)
chr3 (1-40)||(32307710-32307749)
chr3 (1-40)||(49668125-49668164)
chr3 (1-84)||(14234520-14234605)
chr3 (1-81)||(17672656-17672737)
chr3 (1-40)||(9512953-9512992)
chr3 (1-40)||(9520928-9520967)
chr3 (1-40)||(13210376-13210415)
chr3 (1-36)||(16097361-16097396)
chr3 (1-85)||(36166628-36166712)
chr3 (1-81)||(9707658-9707739)
chr3 (1-81)||(29172634-29172715)
chr3 (1-33)||(28194723-28194755)
chr3 (1-41)||(37251216-37251256)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-200)||(13244-13446)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-207)||(928-1136)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-207)||(167858-168066)
scaffold0011 (1-207)||(51946-52155)
[»] scaffold0292 (2 HSPs)
scaffold0292 (4-207)||(3506-3712)
scaffold0292 (1-207)||(376-584)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-207)||(39510-39718)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-207)||(75094-75302)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-200)||(1884-2086)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-200)||(6007-6212)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-207)||(1985-2194)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-175)||(4882-5059)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-207)||(38794-39002)
scaffold0145 (1-177)||(32975-33153)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-181)||(24206-24391)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-143)||(174799-174943)
scaffold0021 (60-200)||(124679-124820)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-207)||(3030-3238)
[»] scaffold0309 (1 HSPs)
scaffold0309 (28-207)||(6669-6852)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-207)||(25944-26153)
scaffold0122 (1-85)||(44709-44795)
scaffold0122 (118-207)||(33374-33463)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-207)||(339829-340035)
scaffold0003 (21-140)||(71353-71474)
[»] scaffold0088 (1 HSPs)
scaffold0088 (4-207)||(20946-21153)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-207)||(17094-17305)
[»] scaffold0228 (3 HSPs)
scaffold0228 (5-207)||(4544-4749)
scaffold0228 (5-207)||(12126-12331)
scaffold0228 (5-207)||(22078-22283)
[»] scaffold0215 (1 HSPs)
scaffold0215 (54-143)||(26911-26999)
[»] scaffold0130 (1 HSPs)
scaffold0130 (47-207)||(27911-28072)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-207)||(22916-23124)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-207)||(16479-16688)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-169)||(3103-3274)
[»] scaffold0484 (1 HSPs)
scaffold0484 (104-207)||(1052-1156)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-181)||(8438-8617)
[»] scaffold0026 (2 HSPs)
scaffold0026 (4-207)||(25932-26137)
scaffold0026 (4-207)||(39894-40099)
[»] scaffold0175 (2 HSPs)
scaffold0175 (18-181)||(13141-13308)
scaffold0175 (3-45)||(34158-34200)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-207)||(39946-40154)
[»] scaffold0029 (1 HSPs)
scaffold0029 (66-142)||(12857-12933)
[»] scaffold1124 (1 HSPs)
scaffold1124 (66-136)||(1975-2045)
[»] scaffold0327 (1 HSPs)
scaffold0327 (43-186)||(3429-3574)
[»] scaffold0210 (2 HSPs)
scaffold0210 (66-143)||(21749-21826)
scaffold0210 (66-143)||(29641-29718)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-85)||(8499-8585)
scaffold0621 (1-40)||(6568-6607)
[»] scaffold0165 (3 HSPs)
scaffold0165 (124-207)||(3640-3723)
scaffold0165 (124-207)||(7704-7787)
scaffold0165 (1-143)||(27692-27837)
[»] scaffold0107 (1 HSPs)
scaffold0107 (21-140)||(15362-15483)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-205)||(8512-8715)
[»] scaffold0046 (3 HSPs)
scaffold0046 (1-88)||(28447-28536)
scaffold0046 (1-40)||(11325-11364)
scaffold0046 (1-40)||(2030-2069)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-85)||(1065-1151)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-83)||(11447-11531)
scaffold0235 (162-207)||(11392-11437)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-143)||(32901-33044)
scaffold0120 (1-143)||(45961-46104)
scaffold0120 (1-176)||(16146-16323)
[»] scaffold0084 (1 HSPs)
scaffold0084 (125-207)||(10323-10405)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-85)||(10543-10629)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-44)||(15694-15737)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-40)||(2694-2733)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-85)||(100407-100493)
scaffold0023 (1-40)||(119908-119947)
scaffold0023 (1-40)||(101532-101571)
scaffold0023 (1-39)||(40224-40262)
[»] scaffold0395 (1 HSPs)
scaffold0395 (28-168)||(881-1021)
[»] scaffold0413 (1 HSPs)
scaffold0413 (4-85)||(12604-12687)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-143)||(4557-4702)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-40)||(1115-1154)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-85)||(2808-2894)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-85)||(13161-13247)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-40)||(6644-6683)
scaffold0333 (1-40)||(14024-14063)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-40)||(1118-1157)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-40)||(19297-19336)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-85)||(53551-53637)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-40)||(15826-15865)
[»] scaffold0138 (1 HSPs)
scaffold0138 (9-84)||(12980-13057)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-143)||(8002-8149)
[»] scaffold0100 (1 HSPs)
scaffold0100 (4-40)||(23932-23968)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-40)||(162-201)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-40)||(6845-6884)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-40)||(1083-1122)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-40)||(5676-5715)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-40)||(6172-6211)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-44)||(8119-8162)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-85)||(10560-10646)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-85)||(38704-38790)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-85)||(22672-22758)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-40)||(62231-62270)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-44)||(60761-60804)
scaffold0010 (1-85)||(129938-130024)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-40)||(160717-160756)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-84)||(12799-12884)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-132)||(128827-128917)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-39)||(14747-14785)
[»] scaffold0352 (1 HSPs)
scaffold0352 (151-207)||(17866-17922)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-41)||(38349-38389)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-41)||(25139-25179)


Alignment Details
Target: scaffold0351 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 16315 - 16521
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16315 tgcagcttagttaaataagaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaacat 16414  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||||||||||||    
T  16415 tcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattattaagtcttaat 16514  T
Q  201 cctaccc 207  Q
    |||||||    
T  16515 cctaccc 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20309141 - 20309347
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  20309141 tgcagcttagttaaataacaaatagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaatat 20309240  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||||||||||||    
T  20309241 tcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattcttaagtcttaat 20309340  T
Q  201 cctaccc 207  Q
    |||||||    
T  20309341 cctaccc 20309347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 38202 - 37995
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||    
T  38202 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtatacaaac 38104  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  38103 attcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataattaacctcattgttaagtctta 38004  T
Q  199 atcctaccc 207  Q
    |||||||||    
T  38003 atcctaccc 37995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 23285898 - 23286103
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | || |||||||| ||||||| | ||||||||||||||||||   || ||||  |    
T  23285898 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaatgt 23285995  T
Q  101 tcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||| || |  |||||||||||    
T  23285996 tcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcttcattaagtcttaa 23286095  T
Q  200 tcctaccc 207  Q
    | ||||||    
T  23286096 tactaccc 23286103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 298903 - 298693
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || ||||    
T  298903 tgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaa 298804  T
Q  98 cattcttcaagtaatgcat-aaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     | |  ||||||||||||| |||||||||||||||||||||| || ||| ||| |||||||||| ||||||| |||||| |||||||| |  ||||||||    
T  298803 taattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatattatagttaacctcttcattaagtct 298704  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  298703 taatgctaccc 298693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22731322 - 22731113
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||||||||| |||||   |||||||||||||| ||||||| | |||||||||||||| |||   || ||||    
T  22731322 tgcagcttagttaaataacaa-cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaaa 22731224  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| || |  ||||||||    
T  22731223 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtct 22731124  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  22731123 taatactaccc 22731113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22738267 - 22738059
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| ||| || ||||||||| |||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  22738267 tgcagcttagttaaataacaa-cattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 22738170  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| || |  ||||||||    
T  22738169 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtct 22738070  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  22738069 taatactaccc 22738059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 23654474 - 23654265
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || || ||||||||| ||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||     
T  23654474 tgcagcttagttaaataacaa-caacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattcaag 23654376  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     |||  |||||||||||||||| ||||||||||||||||||| |||||| ||| |||||| ||| ||||||||||||||||||||||| |  ||||||||    
T  23654375 tattactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtct 23654276  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  23654275 taatgctaccc 23654265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22337148 - 22337355
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| |||| ||||| ||   |||||||||||||| ||||||||| |||  || |||||||| |   |||||      
T  22337148 tgcagcttagttaaataacaa-cagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatacatt 22337246  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||| || |||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||| ||||  ||||||||    
T  22337247 cataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcatcattaagtct 22337346  T
Q  197 taatcctac 205  Q
    |||| ||||    
T  22337347 taatactac 22337355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 23076475 - 23076663
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| ||| ||||||   || |||     
T  23076475 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaat 23076573  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcat 186  Q
     || |||||||||||||| | |||||||||||||||||||||||||| | ||| | |||| ||| |||||||||||||||||||| ||||    
T  23076574 tatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaacatcat 23076663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23103483 - 23103348
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |  ||| ||  ||    
T  23103483 tgcagcttagttaaataa-aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcattca 23103385  T
Q  100 ttcttcaagtaatgca--taaacattatatcacatca 134  Q
    |  ||||||| |||||  |||||||||||||||||||    
T  23103384 taattcaagtcatgcaattaaacattatatcacatca 23103348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 23060546 - 23060742
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||   ||  ||     
T  23060546 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaat 23060644  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtc 195  Q
     || |||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||||| |||||||||||| ||||  |||||||    
T  23060645 tatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcatcattaagtc 23060742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 23660061 - 23660264
Alignment:
Q  6 cttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 103  Q
    |||||||||| ||||| || |||||||||||||||||  ||||| |||||||||| ||||||||| ||| ||| ||||||||||   || ||| |||       
T  23660061 cttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataac 23660159  T
Q  104 tcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    ||||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| ||| ||| |||||||||||| ||||   ||||||| ||| |    
T  23660160 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattataattaacatcatcaataagtctcaatac 23660259  T
Q  203 taccc 207  Q
    |||||    
T  23660260 taccc 23660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 40622244 - 40622151
Alignment:
Q  54 ataattatatcaaattcaattcatcaacatcttatgcataca-----aacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    ||||||||||||| |||||||||||||||||||||| |||||     || ||||||||||||||||||||||||||||  |||||||||||||||    
T  40622244 ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaaca 40622151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 27753730 - 27753810
Alignment:
Q  120 cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||| | ||| |||||| |||  |||||| |||||||||||| ||||  ||||||||||||    
T  27753730 cattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaat 27753810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22105442 - 22105524
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||||||||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  22105442 tgcagcttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 22105524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 23708706 - 23708562
Alignment:
Q  2 gcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    ||||||||||||||||||| | | |||||||||||||||  | |||| ||||| ||||  ||||||| | ||| ||||| |||||| |  ||| |||| |    
T  23708706 gcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaata 23708607  T
Q  100 ttcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
    |  ||||||||||||||| || |||||||||||| |||| |||||    
T  23708606 taattcaagtaatgcatatacaattatatcacattataaacaaca 23708562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7821 - 7735
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  7821 tgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7679618 - 7679657
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  7679618 tgcagcttagttaaataacaaacagcaacataggcagtat 7679657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25175883 - 25175922
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  25175883 tgcagcttagttaaataacaaacagcaacataggcagtat 25175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23072037 - 23071998
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  23072037 tgcagcttagttaaataacgaacaacaacataggcagtat 23071998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 28406009 - 28406048
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  28406009 tgcaacttagttaaataacaaacagcaacataggcagtat 28406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32215053 - 32214972
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  32215053 tgcagcttagttaaataacaa-caacaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 32214972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23207310 - 23207350
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtata 41  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  23207310 tgcagcttagttaataaacaaacagcaacataggcagtata 23207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 40443424 - 40443631
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    |||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||||| |    
T  40443424 tgcagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaata 40443523  T
Q  100 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40443524 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaa 40443623  T
Q  200 tcctaccc 207  Q
    ||||||||    
T  40443624 tcctaccc 40443631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27847918 - 27847712
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27847918 tgcagcttagttaaataataaacagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacat 27847819  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| || |||||||||||||| |||| |||||| ||||||||||||    
T  27847818 tcttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaatctcattattaagtcttaat 27847719  T
Q  201 cctaccc 207  Q
    |||||||    
T  27847718 cctaccc 27847712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10589072 - 10589280
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||| |||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||     | ||||    
T  10589072 tgcagcttagttaaataacaa-cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttcaaa 10589170  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
     |||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||| | | |||||||||||||||||||||||||  |||||||||    
T  10589171 tattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaacctcatcattaagtctt 10589270  T
Q  198 aatcctaccc 207  Q
    ||||||||||    
T  10589271 aatcctaccc 10589280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12698864 - 12699074
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   || |||    
T  12698864 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 12698962  T
Q  97 acattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtc 195  Q
    | ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| || |  |||| ||    
T  12698963 atattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaactc 12699062  T
Q  196 ttaatcctaccc 207  Q
    ||||| ||||||    
T  12699063 ttaatactaccc 12699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9509222 - 9509424
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  9509222 tgcagcttagttaaataacaa-cagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 9509320  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||| ||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| || |  ||||||||    
T  9509321 tattcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtct 9509420  T
Q  197 taat 200  Q
    ||||    
T  9509421 taat 9509424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16386336 - 16386133
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||||||| | |||||||||||||||||   ||||||||||||| |||||||| |  | |||||||||||||||   || ||||    
T  16386336 tgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattcaaa 16386237  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    || |  |||||||||||||||| |||||||| ||||||||||||||||| ||| |||||| ||| |||||||||||||| |||||||| |  ||||||||    
T  16386236 caattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctcttcattaagtct 16386137  T
Q  197 taat 200  Q
    ||||    
T  16386136 taat 16386133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 26212034 - 26212238
Alignment:
Q  6 cttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattc 102  Q
    |||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || |||| | |     
T  26212034 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataatt 26212132  T
Q  103 ttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatc 201  Q
     |||||||||||||||| ||||||||||||| |||||||||||| ||| |||||| ||| ||||||||||||||||||||||| |  ||||||||||||     
T  26212133 ctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatg 26212232  T
Q  202 ctaccc 207  Q
    ||||||    
T  26212233 ctaccc 26212238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 18456500 - 18456319
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||| |  | |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  18456500 tgcagcttagttaaataacgat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 18456402  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaa 180  Q
    || |||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||    
T  18456401 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 38227514 - 38227722
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||||||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  38227514 tgcagcttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 38227612  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||| ||||| | | | |||||||||||||| ||||||||| | |||||||||| | | ||||||| |||||||||||| ||||  |||||||||    
T  38227613 atacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatcattaagtctt 38227712  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  38227713 aatactaccc 38227722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 3564452 - 3564243
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| |||||||||  || ||| |||||||| |   |||||      
T  3564452 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatacatt 3564354  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||| || ||||||| |||||||||||||||||| | ||| |||||| ||||||||| || ||||||||||| ||||  ||||||||    
T  3564353 cataattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcatcattaagtct 3564254  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  3564253 caatactaccc 3564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 17138083 - 17138006
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  |||||||| ||||||    
T  17138083 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaaca 17138006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 12187113 - 12187189
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaac 142  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  |||||||| |||||    
T  12187113 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaac 12187189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48273422 - 48273508
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  48273422 tgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2280207 - 2280121
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||| ||||||||| ||| ||| ||||||||    
T  2280207 tgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatct 2280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 16219802 - 16219717
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatctta 87  Q
    ||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||||    
T  16219802 agcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13647358 - 13647440
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||||||||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  13647358 tgcagcttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 13647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 67778 - 67817
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  67778 tgcagcttagttaaataacaaacagcaacataggcagtat 67817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16495435 - 16495474
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16495435 tgcagcttagttaaataacaaacaacaacataggcagtat 16495474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28505386 - 28505347
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28505386 tgcagcttagttaaataacaaacagcaacataggcagtat 28505347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34200819 - 34200858
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  34200819 tgcagcttagttaaataacaaacagcaacataggcagtat 34200858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 44014211 - 44014250
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  44014211 tgcagcttagttaaataacaaacaacaacataggcagtat 44014250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22072946 - 22073033
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||   |||||||| ||||  |||||||||  || ||| ||||||||    
T  22072946 tgcagcttagttaaataacaaacaacaacataggcactatgcaaaaccagcatgatataacaatatcaaatgtaagtcaacaacatct 22073033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 811219 - 811180
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  811219 tgcagcttagttaaataacaaatagcaacataggcagtat 811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12255881 - 12255842
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  12255881 tgcagcttagttaaataacaaacaacaacatagtcagtat 12255842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12901356 - 12901399
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa 44  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  12901356 tgcagcttagttaataaacaaacaacaacataggcagtatacaa 12901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18005679 - 18005718
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  18005679 tgcagcttagttaaataacaaacagcaacataagcagtat 18005718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 47831840 - 47831879
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  47831840 tgcagcttagttaaataacaaacaacaacatagacagtat 47831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 2530205 - 2530139
Alignment:
Q  21 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 86  Q
    |||| |||||||||||  |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16056361 - 16056446
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||| ||||||||||||||||||| |||||||| || ||| | |||| ||||| ||||  ||||||||| ||| ||| ||||||||    
T  16056361 tgcaccttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 16056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24275201 - 24275282
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  24275201 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 24275282  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48991213 - 48991253
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtata 41  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  48991213 tgcagcttagttaataaacaaacaacaacataggcagtata 48991253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 159; Significance: 8e-85; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 1322 - 1528
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1322 tgcagcttagttaaataacaaacagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacat 1421  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||    
T  1422 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagtcttaat 1521  T
Q  201 cctaccc 207  Q
    |||||||    
T  1522 cctaccc 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 7299 - 7505
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7299 tgcagcttagttaaataacaaacaacaacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaacat 7398  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||    
T  7399 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagtcttaat 7498  T
Q  201 cctaccc 207  Q
    |||||||    
T  7499 cctaccc 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 13530 - 13736
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  || |||||||| || ||||||| ||| |||||||||||||||||| ||||||||    
T  13530 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtatacaaac 13628  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13629 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtctta 13728  T
Q  199 atcctacc 206  Q
    ||||||||    
T  13729 atcctacc 13736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 32100 - 32306
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    ||||||||||||||||||||| || |||||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||||||| | ||||||| |    
T  32100 tgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaaata 32198  T
Q  100 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32199 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaa 32298  T
Q  200 tcctaccc 207  Q
    ||||||||    
T  32299 tcctaccc 32306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 1137 - 931
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| ||    
T  1137 tgcagcttagttaattaataaacatcaacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaatat 1038  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||| ||||| ||||||    
T  1037 tcttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagattatagttaacctcattcttaagacttaat 938  T
Q  201 cctaccc 207  Q
    |||||||    
T  937 cctaccc 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 7e-82; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 31971290 - 31971497
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||||| | |||||||||||||||||||| |||||||     
T  31971290 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtatacaaat 31971388  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31971389 attcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataattaacctcattgttaagtctta 31971488  T
Q  199 atcctaccc 207  Q
    |||||||||    
T  31971489 atcctaccc 31971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16199732 - 16199525
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    |||||||||||||||||||||||| |||||||| |||||| ||| || ||||||||||| ||||||| ||||||||||| |||||||| | ||||||| |    
T  16199732 tgcagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaaata 16199633  T
Q  100 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16199632 ttcttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagattataattaacctcattgttaagtcttaa 16199533  T
Q  200 tcctaccc 207  Q
    ||||||||    
T  16199532 tcctaccc 16199525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21389538 - 21389353
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21389538 tgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacat 21389439  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcat 186  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| || ||||||| |||| ||||||| ||||    
T  21389438 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcat 21389353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 21396068 - 21395888
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21396068 tgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacat 21395969  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||| || |||||||||||| |||||||    
T  21395968 tcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaac 21395888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 21790561 - 21790381
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21790561 tgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacat 21790462  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||| || |||||||||||| |||||||    
T  21790461 tcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaac 21790381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21778864 - 21778697
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21778864 tgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacat 21778765  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcaca 168  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| || |||||||    
T  21778764 tcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 45131084 - 45130877
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaa-ttcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||| | ||||||      
T  45131084 tgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtatacaatt 45130986  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  45130985 attcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataattaacctcattattaagtctta 45130886  T
Q  199 atcctaccc 207  Q
    |||||||||    
T  45130885 atcctaccc 45130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 21919088 - 21918879
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||    
T  21919088 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaa 21918990  T
Q  98 -cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
      |||||||||||||||||||||||||||||||||||||||||| || | ||| |||||| ||| ||||||||||  ||||||||||||| |||||||||    
T  21918989 taattcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagatcgtaattaacctcatcgttaagtct 21918890  T
Q  197 taatcctaccc 207  Q
    ||||| |||||    
T  21918889 taatcttaccc 21918879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20536241 - 20536450
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  20536241 tgcagcttagttaaataacaa-cagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 20536339  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||||||||||||||||||||| ||| | ||| |||||| |||||||||||||||||||||||| || |  ||||||||    
T  20536340 tattcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaacatcctcattaagtct 20536439  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  20536440 taatactaccc 20536450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 28649132 - 28648923
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||||| | |||||||||||||||||   |||||||||||||||| ||||||||| ||| ||| ||||||||||   |||||      
T  28649132 tgcagcttagttaaataacaaa-agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacatt 28649034  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||  || |||||||||||||||||||||||||| | ||| |||||| ||| ||||||| |||||||||||| ||||  ||||||||    
T  28649033 cataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtct 28648934  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  28648933 caatactaccc 28648923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 18818497 - 18818286
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| |  || ||| || |||||||   || |||     
T  18818497 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaat 18818399  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | |||||||||||||| ||||||||||| | ||| |||||| ||| |||||||||||||||||||| || |  ||||||||    
T  18818398 tatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtct 18818299  T
Q  197 taatcctacccta 209  Q
    |||| ||||||||    
T  18818298 taatactacccta 18818286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 18879319 - 18879126
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | ||  ||||||| ||||||| | ||||||||||||||||||   || |||| ||    
T  18879319 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaatat 18879223  T
Q  101 tcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    ||||||||||||||  | |||||||||||||||||||||||||| |  || ||||||| || |||||||||||||| ||||| ||||  |||||||||    
T  18879222 tcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttat-cagcttcacagattatagttaacatcatcattaagtctt 18879126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22626769 - 22626977
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  22626769 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattcaatt 22626867  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || ||||||||||||  || |||||||||||||||||| |||| || | ||| |||||| ||| |||||||||||||||||||| || |  ||||||||     
T  22626868 atacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctc 22626967  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  22626968 aatactaccc 22626977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21924016 - 21923808
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||||||||| |||||   || |||||||| || ||||||| | ||| ||| ||||||||||   || |||     
T  21924016 tgcagcttagttaaataacaa-cagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaat 21923918  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | ||| |||| |  |||||||||||||||| ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  21923917 tatacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 21923818  T
Q  197 taatcctacc 206  Q
    |||| |||||    
T  21923817 taatactacc 21923808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16092430 - 16092231
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||      
T  16092430 tgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacatt 16092332  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatctt-atacaacttcacagattataattaacctcattgttaagtc 195  Q
    |||  || ||||||||| || |||||||||||||||||||||||||| | ||| ||||| | |||||||| || |||||||||||| ||||  |||||||    
T  16092331 cataatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatcatccttaagtc 16092232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 22875098 - 22875281
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||| ||  || ||||| |||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  22875098 tgcagcttagttaaatagcag-cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattc 22875196  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatctt-atacaacttcacagattataattaac 181  Q
    ||  |||||||||||| || |||||||||||||||||||||||||| | ||| ||||| | ||| ||||||||||||||||||||    
T  22875197 ataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaac 22875281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 25363123 - 25363019
Alignment:
Q  104 tcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||| |||||||||||||||||| |||| |  |||||||||||| |    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatac 25363024  T
Q  203 taccc 207  Q
    |||||    
T  25363023 taccc 25363019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 6759291 - 6759498
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| |||||||||||||   || ||||||||||| ||||||||| ||| |||   |||||| |   |||||      
T  6759291 tgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaagtca---acatctcaattatacact 6759386  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatctt-atacaacttcacagattataattaacctcattgttaagtc 195  Q
    |||  ||||| |||||| || |||||||||||||||||||||||||| | ||| ||||| | ||| |||||||||||||||||||| ||||  |||||||    
T  6759387 cataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagtc 6759486  T
Q  196 ttaatcctaccc 207  Q
    | ||| ||||||    
T  6759487 tcaatactaccc 6759498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 7372811 - 7372986
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||| |||| |||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  7372811 tgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaat 7372909  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
     || |||||||||||||       |||||||||| ||||||||||| | ||| |||||| ||| ||||||||||||||||||||    
T  7372910 tatacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 7372986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 23406412 - 23406597
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaa--catcttatgcataca 95  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||   |||||||   || ||    
T  23406412 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacatatcatcttaaatattca 23406510  T
Q  96 aacattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    |  || |||||||||||||| | |||||||||||||| |||| |||||| | ||| |||||| ||||||||||| ||||||||||||    
T  23406511 attatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaac 23406597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 207
Target Start/End: Original strand, 23648628 - 23648795
Alignment:
Q  41 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacatcataatc 139  Q
    |||||| ||||||||||| ||||||  | |||| || ||||||||||   || |||  |  |||||||||||||| | ||||||||||||||||||||||    
T  23648628 acaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatc 23648727  T
Q  140 aacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||| | ||| |||||| ||| ||| |||||||||||||||| ||||  ||| |||||||| ||||||    
T  23648728 aacatcaacacatcttaaacagcttaacagattataattaacatcatcattaggtcttaatactaccc 23648795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17140949 - 17141031
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaac 81  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  || ||||||||||| ||||| |||  || ||||||||    
T  17140949 tgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatcgaatgtaaatcatcaac 17141031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6520401 - 6520486
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 84  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  6520401 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 6520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5866362 - 5866323
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  5866362 tgcagcttagttaaataacaaacagcaacataggcagtat 5866323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21285630 - 21285716
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||| ||||||||||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||| ||||||||    
T  21285630 tgcagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 21285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21491028 - 21491067
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21491028 tgcagcttagttaaataacaaacagcaacataggcagtat 21491067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23760932 - 23760893
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  23760932 tgcagcttagttaaataacaaacagcaacataggcagtat 23760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38855339 - 38855300
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  38855339 tgcagcttagttaaataacaaacagcaacataggcagtat 38855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 20498595 - 20498740
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagta--tacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||| |||||||||  |||||||| ||||||||||||||  || || ||||||| ||||  ||||||||| ||| |||||||||||| |  ||| || |     
T  20498595 tgcaacttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatat 20498694  T
Q  99 attcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
    ||  ||||||||||| ||| || |||||||||||| |||| |||||    
T  20498695 ataattcaagtaatgtatatacaattatatcacattataaacaaca 20498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 983494 - 983455
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  983494 tgcagcttagttaaataacaatcagcaacataggcagtat 983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26355786 - 26355747
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  26355786 tgcagcttagttaaacaacaaacaacaacataggcagtat 26355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14409576 - 14409495
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  14409576 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 14409495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16413448 - 16413367
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  16413448 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 16413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19154975 - 19154935
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtata 41  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  19154975 tgcagcttagttaataaacaaacagcaacataggcagtata 19154935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 14053389 - 14053181
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacat-cttatgcatacaaac 98  Q
    |||| ||||||||||||||||||| || ||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||     
T  14053389 tgcaacttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcatacaaat 14053290  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  14053289 attcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagattataattaacctcattgttaagtctta 14053190  T
Q  199 atcctaccc 207  Q
    |||||||||    
T  14053189 atcctaccc 14053181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 17046520 - 17046724
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17046520 tgcagcttagttaaataacaaacagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacat 17046619  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||||| || |||||||||||||||||||||| ||| ||||||||||||    
T  17046620 tcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagattataattaaccttattattaagtcttaat 17046719  T
Q  201 cctac 205  Q
    |||||    
T  17046720 cctac 17046724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12902790 - 12902999
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| |  |||||||||||||||||   || ||||    
T  12902790 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaaa 12902888  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||| |  ||||||||    
T  12902889 tattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtct 12902988  T
Q  197 taatcctaccc 207  Q
    |||||||||||    
T  12902989 taatcctaccc 12902999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 7088910 - 7089117
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  7088910 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattcaaa 7089008  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||| ||||||||||||||||| ||||||||||||||||||| | |||| ||| |||||| ||||||||||||||||||||||||||| |  ||||||||    
T  7089009 tattattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctcttcattaagtct 7089108  T
Q  197 taatcctac 205  Q
    |||| ||||    
T  7089109 taatgctac 7089117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 44052862 - 44053064
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  44052862 tgcagctcagttaaataacaa-catcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 44052960  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||  | |||||||||||||||||||||||||| |  || |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  44052961 tattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattataattaacatcatcattaagtct 44053060  T
Q  197 taat 200  Q
    ||||    
T  44053061 taat 44053064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22636468 - 22636676
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||| |||| |||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  22636468 tgcagcttagttaaataacaa-caacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 22636566  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||||| |||||||||||||||||||||| ||| | ||| |||||| ||| |||||||||||||||||||| || | |||||||||    
T  22636567 tattcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctta-acagcttcacagattataattaacatcctcgttaagtct 22636665  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  22636666 taatactaccc 22636676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 23374447 - 23374238
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || ||||    
T  23374447 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaa 23374349  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     | |  |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| | | ||||| |||||||| |||||||| |  ||||||||    
T  23374348 taattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattatagttaacctcttcattaagtct 23374249  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  23374248 taatgctaccc 23374238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16377609 - 16377402
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  ||    
T  16377609 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattca 16377511  T
Q  100 ttcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    |  |||||||||||| || |||||||||||||||||||||||||| | ||  |||||| ||| || ||||||||||||||||| ||||  |||||||| |    
T  16377510 taattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatcattaagtctca 16377411  T
Q  199 atcctaccc 207  Q
    || ||||||    
T  16377410 atactaccc 16377402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 16270323 - 16270145
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||| |||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||      
T  16270323 tgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaatt 16270225  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataat 177  Q
    || |||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||    
T  16270224 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 16270145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16240057 - 16239849
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||| |||| |||||||||||  | ||| |||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  16240057 tgcaacttaattaaataacaat-agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 16239959  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || ||| |||||||||| | |||||||||||| ||||||||||||| | ||| |||||| ||| |||| ||||||||||||||| ||||  |||||||||    
T  16239958 atactttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattataattaacatcatcattaagtctt 16239859  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  16239858 aatactaccc 16239849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 7893736 - 7893935
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||||  | |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  7893736 tgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaat 7893834  T
Q  98 cattcttcaagtaatgcataaac-attatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | || ||||| |||||||||||||| ||||   | |||||| ||| |||||||||||||||||||| |||| |||||||||    
T  7893835 tatacttcaagtaatgcacataccattatttcacatcataatcagcaac---acatcttaaacagcttcacagattataattaacatcatcgttaagtct 7893931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 3096772 - 3096885
Alignment:
Q  94 caaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaag 193  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||| |||| ||| |||||| ||| ||||||| |||||||||||||||||  |||||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatcattaag 3096871  T
Q  194 tcttaatcctaccc 207  Q
    | || |||||||||    
T  3096872 tatttatcctaccc 3096885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 14038681 - 14038890
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| | |||||||||||   || |||| |||||| ||||||||| ||| ||| |||||||| |   |||||      
T  14038681 tgcagcttagttaaataacaa-cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatacatt 14038779  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||| | ||| || ||| ||| |||||||||||||||||||  ||||  ||||||||    
T  14038780 catatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcattaagtct 14038879  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  14038880 caatactaccc 14038890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7798807 - 7798952
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||||||||||||||   || |||     
T  7798807 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaat 7798905  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaaca 143  Q
     || |||||||||||||| | |||||| ||||||| |||||||||||    
T  7798906 tatacttcaagtaatgcacataacattgtatcacaacataatcaaca 7798952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 15121834 - 15121747
Alignment:
Q  54 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaac 142  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  ||||||||||||||    
T  15121834 ataattatatcaa-ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 15121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 17048055 - 17047951
Alignment:
Q  104 tcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| |||||||| || ||||||  ||| |  |||||||||||| |    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatac 17047956  T
Q  203 taccc 207  Q
    |||||    
T  17047955 taccc 17047951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 52873455 - 52873367
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 87  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||    
T  52873455 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12288298 - 12288211
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cag--catgacataattatatcaaattcaattcatcaacatc 84  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  |||  ||||| ||||  ||||||||| ||||||| |||||||    
T  12288298 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaatgcaattcaacaacatc 12288211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 52243284 - 52243137
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaa 96  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  |||  ||||| ||||  |||||||||  |||||| |||||||| |  ||| ||     
T  52243284 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcagttcatgatataacaatatcaaatgaaattcaacaacatctcaaacattcat 52243185  T
Q  97 acattcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
    | ||  | ||||||||||||| || |||||||||||| |||| |||||    
T  52243184 atataatccaagtaatgcatatacaattatatcacattataaacaaca 52243137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 6899924 - 6900062
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||| ||||||||||||||||  | |||||||||||||||||||  || |||  |||||| ||||||||| ||| ||| ||||||||||   || |||      
T  6899924 tgcatcttagttaaataacaat-agcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 6900022  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataa 137  Q
    || |||||||||||| | | ||||||||||||||||||||    
T  6900023 atacttcaagtaatgtacataacattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13939 - 13853
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  13939 tgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 13853  T

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Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12774040 - 12774079
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12774040 tgcagcttagttaaataacaaacagcaacataggcagtat 12774079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15551850 - 15551889
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15551850 tgcagcttagttaaataacaaacagcaacataggcagtat 15551889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39706376 - 39706337
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  39706376 tgcagcttagttaaataacaaacaacaacataggcagtat 39706337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 43256227 - 43256161
Alignment:
Q  21 aacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 86  Q
    |||| |||||||||||| |||| |||| ||||||||||| ||||||| ||||||||| |||||||||    
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 8846391 - 8846428
Alignment:
Q  3 cagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  8846391 cagcttagttaaataacaaacagcaacataggcagtat 8846428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 54798842 - 54798756
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||| |||||||| || ||||| | |||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  54798842 tgcagcttagttgaataacaa-cagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3096326 - 3096368
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  3096326 tgcagcttagttaaataac-aacagcaacataggcagtatacaa 3096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14280346 - 14280431
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||||||||| || |||||  ||||||||||||   || ||||||||||| ||||||||| ||| ||| ||||||||    
T  14280346 tgcagcttagttaaataacaa-cagcaacac-ggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatct 14280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18215406 - 18215325
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  18215406 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 18215325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44929012 - 44928926
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||||||| |||| ||||| | |||||||||   |||||||||||||||| || |||||| ||| |||  |||||||    
T  44929012 tgcagcttagttaaataac-aacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatct 44928926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43198643 - 43198611
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacatag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  43198643 tgcagcttagttaaataacaaacagcaacatag 43198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 10511 - 10305
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | ||||||| ||    
T  10511 tgcagcatagttaattaacaaacagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaatat 10412  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  10411 tcttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataattaaccttattattaagtcttaat 10312  T
Q  201 cctaccc 207  Q
     ||||||    
T  10311 tctaccc 10305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 144; Significance: 7e-76; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 4745 - 4953
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   ||||||||||||| || ||||| | ||||||||||| |||||||| |||||||    
T  4745 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaa 4843  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4844 tattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcattgttaagtctt 4943  T
Q  198 aatcctaccc 207  Q
    ||||||||||    
T  4944 aatcctaccc 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 13 - 177
Alignment:
Q  43 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaac 142  Q
    ||||||||||||||| || ||||| | ||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  143 aacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  113 aacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctaccc 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 5216 - 5010
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5216 tgcagcttagttaaataacaaacatcaacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacat 5117  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||| |||||| |||| ||  |||||| |||||||||||||| ||| |||| |||||||    
T  5116 tcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatattataattaaccttattattaaatcttaat 5017  T
Q  201 cctaccc 207  Q
    |||||||    
T  5016 cctaccc 5010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 51615 - 51821
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||    
T  51615 tgcagcttagttaaataacaaacagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgtatacaaatat 51714  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
     ||||||| ||||||||||||||||| ||| ||||| |||||||| ||||||||||| || |||||||||||||| ||||||||| | ||||||||||||    
T  51715 ccttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagattatagttaacctcactcttaagtcttaat 51814  T
Q  201 cctaccc 207  Q
    |||||||    
T  51815 cctaccc 51821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16920718 - 16920512
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||| ||    
T  16920718 tgcagcttagttaaataacaaacagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaatat 16920619  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||| || |||||||| || ||||| |||||||| ||||||||||| ||||||||||||    
T  16920618 tcttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagattatagttaacctcattcttaagtcttaat 16920519  T
Q  201 cctaccc 207  Q
     ||||||    
T  16920518 tctaccc 16920512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22831536 - 22831744
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatctta--tgcatacaaac 98  Q
    |||||||||||||||||||||||| ||||||||||| | | ||||  ||||||||||| ||||||||||||||||||||||||||||  || ||||||||    
T  22831536 tgcagcttagttaaataacaaacagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagatgtatacaaac 22831635  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| | ||||||||    
T  22831636 attcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtctta 22831735  T
Q  199 atcctaccc 207  Q
    || ||||||    
T  22831736 attctaccc 22831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 11185538 - 11185744
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||  ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  11185538 tgcagcttagttaaataacaaacaacaacatgtgcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaacat 11185637  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||| ||||| ||| ||||||||| |||| ||||||||||| || ||||||||||||   ||||||||| | ||||||||||||    
T  11185638 tcttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattacggttaacctcactattaagtcttaat 11185737  T
Q  201 cctaccc 207  Q
    |||||||    
T  11185738 cctaccc 11185744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 20361048 - 20360839
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||| ||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  20361048 tgcagcttagttaaataacaa-cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 20360950  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||||| |||||||||||||||||  ||||||||    
T  20360949 tattcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcatcattaagtct 20360850  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  20360849 taatactaccc 20360839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35245619 - 35245758
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||    
T  35245619 tgcagcttagttaattaacaaacaccaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatat 35245718  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatca 140  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35245719 tcttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20638371 - 20638169
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||||| |||||||||||    || ||||    
T  20638371 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaaa 20638273  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  20638272 cattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 20638173  T
Q  197 taat 200  Q
    ||||    
T  20638172 taat 20638169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 29060573 - 29060782
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||      
T  29060573 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacatt 29060671  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  ||||||||||||| | ||||||||||| |||||||||||||| | ||| |||||| ||| |||||||||||||||||||  ||||  ||||||||    
T  29060672 cataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaatatcatcattaagtct 29060771  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  29060772 caatactaccc 29060782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 18409915 - 18409704
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||| ||||||||||||| || ||||| |||||||||||   |||| ||||||||||| ||||||||| ||| ||| |||||||| |  ||| ||      
T  18409915 tgcagctcagttaaataacaa-cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatccatt 18409817  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  ||||| |||| |||| |||||||||||||||||||||||||| | ||| |||||| ||| ||||||| |||||||||||| ||||  ||||||||    
T  18409816 cataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtct 18409717  T
Q  197 taatcctacccta 209  Q
     ||| ||||||||    
T  18409716 caatactacccta 18409704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 19303628 - 19303441
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || ||||| ||| |||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  19303628 tgcagcttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaattatacattc 19303530  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcat 186  Q
    ||  ||||||||||| | | |||||||||||||||||||||||||| | ||| |||||  ||| |||||||||||||||||||| ||||    
T  19303529 atatttcaagtaatgtacataacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcat 19303441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 20593806 - 20593987
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||| |||||||||| ||||| ||||| | |||||||||   |||||||||||||||| ||||||||| ||| ||| |||||||| |   ||||||     
T  20593806 tgcagctcagttaaataa-aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaat 20593904  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataatta 179  Q
    |||   ||||||||||| || |||| ||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||||    
T  20593905 cataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataatta 20593987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 25629443 - 25629234
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||| |||| ||  |||| | |||||||||   |||||||||||||||  ||||||||| ||| ||| |||||||| |   |||||      
T  25629443 tgcagcttagttaaattacaa-caggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacatt 25629345  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||||||  |||  ||||||||    
T  25629344 cataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaagtct 25629245  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  25629244 caatactaccc 25629234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22780315 - 22780106
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| ||  |||||||||| |||||||   |||| ||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  22780315 tgcagcttagttaaataacaa-caaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaat 22780217  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || ||||||||||||||   |||||||||||||| ||||||||||| | ||| |||||| ||| ||||||||||||| |||||| ||||  ||||||||    
T  22780216 tatacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcattaagtct 22780117  T
Q  197 taatcctaccc 207  Q
    | || ||||||    
T  22780116 ttatactaccc 22780106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 17287884 - 17287675
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||||| |||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  17287884 tgcagcttagttaaataacaa-cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaat 17287786  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | |||||||| ||| | ||||||||||  | ||| |||||| ||| |||||||| ||||||||||| || |  ||||||||    
T  17287785 tatacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcctcattaagtct 17287686  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  17287685 caatgctaccc 17287675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16496277 - 16496411
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||    
T  16496277 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaa 16496375  T
Q  98 cattcttcaagtaatgcat-aaacattatatcacat 132  Q
     | |  ||||||||||||| ||| ||||||||||||    
T  16496376 taattctcaagtaatgcataaaatattatatcacat 16496411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 20076733 - 20076863
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||| ||||  |||||||||||||| ||||||||| |||   ||||||||||||   || |||      
T  20076733 tgcagcttagttaaataacaa-cagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatcttaaaaattcaatt 20076828  T
Q  99 attcttcaagtaatgcata-aacattatatcacat 132  Q
    || ||||||||||||| || |||||||||||||||    
T  20076829 atacttcaagtaatgcgtataacattatatcacat 20076863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 27416008 - 27415887
Alignment:
Q  21 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcat-a 117  Q
    |||| |||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||  | || ||||  |||||| | ||||||||| |    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 27415910  T
Q  118 aacattatatcacatcataatca 140  Q
    ||||||||||||||| |||||||    
T  27415909 aacattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25644353 - 25644499
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat---acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||| ||| |||||||||||||||   | |||||| ||| ||||  |||||||||  || |||||||||||| |  ||| || |    
T  25644353 tgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatctcaaacattcata 25644452  T
Q  98 cattcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
     ||  |||||||||||| || || |||||||||||||| || |||||    
T  25644453 tataattcaagtaatgcgtatacaattatatcacatcaaaaacaaca 25644499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27333306 - 27333267
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27333306 tgcagcttagttaaataacaaacagcaacataggcagtat 27333267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27394046 - 27394007
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27394046 tgcagcttagttaaataacaaacagcaacataggcagtat 27394007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22782257 - 22782389
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| |||| ||| |   || || |    
T  22782257 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcaca 22782354  T
Q  98 cattcttcaagtaatgcataaac-attatatcaca 131  Q
    |||  ||||||||||||||| || |||||||||||    
T  22782355 cataattcaagtaatgcatatacaattatatcaca 22782389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25656659 - 25656727
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaat 68  Q
    ||||||||||||||||||||| || |||||||| ||||||||||   |||||||||||||| |||||||||    
T  25656659 tgcagcttagttaaataacaa-cagcaacatag-cagtatacaaaaacagcatgacataataatatcaaat 25656727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9098602 - 9098563
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  9098602 tgcagcttagttaaataacaaacagcaacaaaggcagtat 9098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19652228 - 19652267
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  19652228 tgcagcttagttaaacaacaaacaacaacataggcagtat 19652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20109171 - 20109257
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||| ||| | ||||  ||||||||| ||| ||||||||||||    
T  20109171 tgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatct 20109257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1595579 - 1595660
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || |||||||  ||||||||||   || ||||||||||| ||||||||| ||||||| ||||    
T  1595579 tgcagcttagttaaataacaa-cagcaacataa-cagtatacaaaaacaacatgacataataatatcaaatgcaattcaacaac 1595660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 38801476 - 38801270
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||  ||    
T  38801476 tgcagcttagttaaataacaaacagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatatacaattat 38801377  T
Q  101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| || ||||||| |||||| |||| |||||| ||||||||||||    
T  38801376 tcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaattatagttaatctcattattaagtcttaat 38801277  T
Q  201 cctaccc 207  Q
    |||||||    
T  38801276 cctaccc 38801270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 27250817 - 27250631
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||||  | |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  27250817 tgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 27250719  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctc 184  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||    
T  27250718 tattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctc 27250631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21026713 - 21026922
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||| |||||||||||||||   ||||||||| ||| |||||||| | ||||||| ||||||||||   || ||||    
T  21026713 tgcagcttagttaaataacaa-cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattcaaa 21026811  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     | |  |||||||||||||||| |||||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||||||||| |  ||||||||    
T  21026812 taattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctcttcattaagtct 21026911  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  21026912 taatgctaccc 21026922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 50210301 - 50210092
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||      
T  50210301 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacatt 50210203  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||| |  |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  50210202 cataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 50210103  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  50210102 caatactaccc 50210092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 22354616 - 22354452
Alignment:
Q  43 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacatcataatcaa 141  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||   || |||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  142 caacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctacc 206  Q
    || | ||| |||||| ||| |||||||||||||||||||| || |  |||||||||||| |||||    
T  22354516 catcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacc 22354452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 34509813 - 34510022
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||   |||||      
T  34509813 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacatt 34509911  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||   ||||||||||| || ||||||||||||||||||| |||||| | ||| |||||| ||| ||||| |||||||||||||| ||||  ||||||||    
T  34509912 catatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattataattaacatcatcattaagtct 34510011  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  34510012 caatactaccc 34510022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 22532308 - 22532510
Alignment:
Q  7 ttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 103  Q
    ||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||| | | ||||||| ||||||||||   || ||  |||  |    
T  22532308 ttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataat 22532406  T
Q  104 tcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||| | |||| |||| ||||  |||||||| ||| |    
T  22532407 tcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcatcattaagtctcaatac 22532506  T
Q  203 tacc 206  Q
    ||||    
T  22532507 tacc 22532510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 48603652 - 48603730
Alignment:
Q  104 tcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||    
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 48603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 20135262 - 20135403
Alignment:
Q  41 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacatcataatc 139  Q
    |||||| ||||||||||| ||||||  | ||||||| |||||||||| | || |||  |  |||||||||||||||| |||||||||||| ||||||||     
T  20135262 acaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatg 20135361  T
Q  140 aacaacgacatatcttatacaacttcacagattataattaac 181  Q
    |||| | ||| |||||| ||| ||||||||||||||||||||    
T  20135362 aacatcaacacatcttaaacagcttcacagattataattaac 20135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22356168 - 22356060
Alignment:
Q  94 caaacattcttcaagtaatgcata-aacattatatcacatcataatcaa-caacgacatatcttatacaacttcacagattataattaacctcattgtta 191  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| || | ||| |||||| | | |||||||||||||||||||| ||||  |||    
T  22356168 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcatta 22356069  T
Q  192 agtcttaat 200  Q
    |||||||||    
T  22356068 agtcttaat 22356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22357854 - 22357746
Alignment:
Q  94 caaacattcttcaagtaatgcata-aacattatatcacatcataatcaa-caacgacatatcttatacaacttcacagattataattaacctcattgtta 191  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| || | ||| |||||| | | |||||||||||||||||||| ||||  |||    
T  22357854 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcatta 22357755  T
Q  192 agtcttaat 200  Q
    |||||||||    
T  22357754 agtcttaat 22357746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21896344 - 21896258
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||| |||||||||  |||||||| |||||||||||||||||  |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  21896344 tgcaacttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 21861658 - 21861513
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||| |||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| |||||||||||| |  ||| || |     
T  21861658 tgcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatat 21861559  T
Q  99 attcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
    ||  ||||||||||| ||| || |||||||||||| |||| |||||    
T  21861558 ataattcaagtaatgtatatacaattatatcacattataaacaaca 21861513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20847242 - 20847173
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaat 68  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||   ||||||||||||| ||||||||||    
T  20847242 tgcagcttagttaaataac-aacagcaacataggcagtacacaaaatcagcatgacataaatatatcaaat 20847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21754078 - 21754117
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21754078 tgcagcttagttaaataacaaacaacaacataggcagtat 21754117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22921957 - 22921918
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  22921957 tgcagcttagttaaataacaaacaacaacataggcagtat 22921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 33797573 - 33797694
Alignment:
Q  21 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcat-a 117  Q
    |||| ||||||| |||| |||||| || ||||||||||| ||||||| ||||||||| |||||||||    || ||||  |||||| ||||||||||| |    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 33797671  T
Q  118 aacattatatcacatcataatca 140  Q
    ||||||||||||||| |||||||    
T  33797672 aacattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35261166 - 35261051
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| |||   |||||||||| |  ||| || ||    
T  35261166 tgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaa---atcaacatctcaaacattcatac 35261070  T
Q  99 attcttcaagtaatgcata 117  Q
    ||  |||||||||||||||    
T  35261069 ataattcaagtaatgcata 35261051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45574975 - 45574893
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat---acaacagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||| |||| |||||||||||||||   | |||||||||||||||| ||| ||||| ||| ||| ||||    
T  45574975 tgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaac 45574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14295639 - 14295600
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  14295639 tgcagcttagttaaataacaaacagcaacataggtagtat 14295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16758682 - 16758721
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  16758682 tgcaacttagttaaataacaaacagcaacataggcagtat 16758721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20918637 - 20918676
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  20918637 tgcagcttagttaaataacaaactgcaacataggcagtat 20918676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33681040 - 33681079
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  33681040 tgcaacttagttaaataacaaacagcaacataggcagtat 33681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 52928058 - 52928019
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  52928058 tgcagcttagttaaataacaaacaacaacatagacagtat 52928019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 22237663 - 22237746
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||||||||| | ||||||||| ||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  22237663 agcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22237746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 134; Significance: 6e-70; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15551 - 15344
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||||||||||||||  | |||||||||||||||||||  || ||||||||||| ||||||| |||||||||||||||||||||| ||| |||     
T  15551 tgcagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaaaat 15453  T
Q  99 attcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  15452 attcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaaccttattattaagtctta 15353  T
Q  199 atcctaccc 207  Q
    |||||||||    
T  15352 atcctaccc 15344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 7378 - 7465
Alignment:
Q  54 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaac 142  Q
    ||||||||| |||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  |||||||| |||||    
T  7378 ataattata-caaattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaac 7465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 6e-70; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 21293057 - 21292849
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-cagcatgacataattatatcaa-attcaa-ttcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||| |||| ||| |||||||||| ||||||| |||||| ||||||||||||||| | ||||||     
T  21293057 tgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatacaat 21292959  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
     |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21292958 tattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagattataattaacctcattattaagtctt 21292859  T
Q  198 aatcctaccc 207  Q
    ||||||||||    
T  21292858 aatcctaccc 21292849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 8286931 - 8286721
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   |  |||    
T  8286931 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataatcaa 8286833  T
Q  97 acattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtc 195  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||||| | |||||||||| || |  |||||||    
T  8286832 acattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacataatataattaacatcttcattaagtc 8286733  T
Q  196 ttaatcctaccc 207  Q
    ||||| ||||||    
T  8286732 ttaatactaccc 8286721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 23390584 - 23390382
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  23390584 tgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 23390486  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| | | |||||||||||||||||||| || |  ||||||||    
T  23390485 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtct 23390386  T
Q  197 taat 200  Q
    ||||    
T  23390385 taat 23390382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 22075054 - 22075261
Alignment:
Q  3 cagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaaca 99  Q
    ||||||||||||||||||| || ||||||||| |||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||| |    
T  22075054 cagcttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 22075152  T
Q  100 ttcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctta 198  Q
     |  |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| |  ||||||||||    
T  22075153 attctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtctta 22075252  T
Q  199 atcctaccc 207  Q
    || ||||||    
T  22075253 atgctaccc 22075261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24493602 - 24493810
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||| ||||| ||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  24493602 tgcagcttggttaagtaacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 24493700  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||||| ||||| | |||||||||||||||||||||||||| | |||||||||| | | |||||||||||||||||||| ||||| |||||||||    
T  24493701 atacttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattataattaacatcattattaagtctt 24493800  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  24493801 aatactaccc 24493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 37723936 - 37724080
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |  ||| ||  |||    
T  37723936 tgcagcttagttaaataacagacagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcattcat 37724035  T
Q  101 tcttcaagtaatgca--taaacattatatcacatcataatcaaca 143  Q
      |||||||||||||  ||||||||||||||||||||| ||||||    
T  37724036 aattcaagtaatgcaattaaacattatatcacatcatattcaaca 37724080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 9077985 - 9078194
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| |||||||| |   |||||      
T  9077985 tgcagcttagttaaataacaa-cagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacatt 9078083  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||   ||||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  9078084 cataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 9078183  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  9078184 caatactaccc 9078194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 13025344 - 13025552
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||| ||||||||||||||  | |||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||      
T  13025344 tgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaatt 13025442  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||| ||||| | | |||||||||||||||| ||||||||| | |||||||||| ||||||||||| |||||||||||| ||||  |||||||||    
T  13025443 atacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtctt 13025542  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  13025543 aatactaccc 13025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 13095528 - 13095736
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||| ||||||||||||||  | |||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||      
T  13095528 tgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaatt 13095626  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||| ||||| | | |||||||||||||||| ||||||||| | |||||||||| ||||||||||| |||||||||||| ||||  |||||||||    
T  13095627 atacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtctt 13095726  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  13095727 aatactaccc 13095736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 25421565 - 25421774
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  25421565 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaat 25421663  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | |||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  25421664 tatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtct 25421763  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  25421764 caatgctaccc 25421774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24529253 - 24529462
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| ||||||||||   |||||      
T  24529253 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatacatt 24529351  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||   ||||||||||| || ||||||||||||||||||| |||||| | ||| |||||| ||| |||||||||||||| ||||| ||||  |||||| |    
T  24529352 catatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagttt 24529451  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  24529452 caatactaccc 24529462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 25431427 - 25431635
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||| |||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||    | |||     
T  25431427 tgcatcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaat 25431525  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | |||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  25431526 tatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtct 25431625  T
Q  197 taatcctacc 206  Q
     ||| |||||    
T  25431626 caatgctacc 25431635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 22107357 - 22107254
Alignment:
Q  103 ttcaagtaatgcataa-acattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatc 201  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||| |  ||||||||||||     
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaata 22107258  T
Q  202 ctac 205  Q
    ||||    
T  22107257 ctac 22107254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 21808477 - 21808343
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||    
T  21808477 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaa 21808379  T
Q  98 cattcttcaagtaatgcat-aaacattatatcacat 132  Q
     | |  ||||||||||||| ||||||||||||||||    
T  21808378 taattctcaagtaatgcataaaacattatatcacat 21808343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 1096500 - 1096709
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| ||| ||||| |||   || ||| ||||||| ||||||||| ||| ||| |||||||| |   |||||      
T  1096500 tgcagcttagttaaataacaa-cagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatatacatt 1096598  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  ||||||||||||||| |||||||||||||||||||||||||| | ||  |||||| ||| ||||| || ||||||||||| || |  ||||||||    
T  1096599 cataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcctcattaagtct 1096698  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  1096699 caatactaccc 1096709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 23572178 - 23572254
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaac 142  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  ||||||||||||||    
T  23572178 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 23572254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 18770024 - 18769947
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  |||||||| ||||||    
T  18770024 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaaca 18769947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 21729152 - 21729018
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||    
T  21729152 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaa 21729054  T
Q  98 cattcttcaagtaatgcat-aaacattatatcacat 132  Q
     | |  ||||||||||||| ||| ||||||||||||    
T  21729053 taattctcaagtaatgcataaaatattatatcacat 21729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22032415 - 22032492
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  |||||||| ||||||    
T  22032415 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaaca 22032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 20910866 - 20910745
Alignment:
Q  21 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcat-a 117  Q
    |||| |||||||| ||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||   ||| ||||  |||||| ||||||||||| |    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaacattcaaataattctt-aagtaatgcataa 20910768  T
Q  118 aacattatatcacatcataatca 140  Q
    ||||||||||||||| |||||||    
T  20910767 aacattatatcacattataatca 20910745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 18356367 - 18356488
Alignment:
Q  21 aacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aa 118  Q
    |||| |||||||||||| |||| |||||||||| ||||| ||||||| ||||||||| |||||||||    || |||| |||  | ||||||||||| ||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcataaa 18356466  T
Q  119 acattatatcacatcataatca 140  Q
    |||||||||||||| |||||||    
T  18356467 acattatatcacattataatca 18356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20027029 - 20026942
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacag--catgacataattatatcaaattcaattcatcaacatc 84  Q
    |||||||||||||||||||||||| |||||||||||||||  | |||||  ||||| ||||| ||||||||| ||||||| |||||||    
T  20027029 tgcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 18418613 - 18418753
Alignment:
Q  1 tgcagcttagttaaa-taacaaacatcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||| |||||||||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||  | ||||||| ||||||||||   || |||      
T  18418613 tgcaacttagttaaaataacaa-catcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta-atattcaata 18418709  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaa 141  Q
    |  |||||||||||| | | ||||||||||||||||||||||||    
T  18418710 aaacttcaagtaatgtacacaacattatatcacatcataatcaa 18418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21329585 - 21329500
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 84  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  || ||| | ||||  ||||| ||||||| |||||||||||    
T  21329585 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatc 21329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 21986130 - 21986026
Alignment:
Q  104 tcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||||| |||||| |||||| ||||| |||||| | ||| |||||| ||||||||||| |||||| ||||| ||||  | |||||| ||| |    
T  21986130 tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatac 21986031  T
Q  203 taccc 207  Q
    |||||    
T  21986030 taccc 21986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21997622 - 21997553
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaat 68  Q
    ||||||||||||||||||| |||| |||||||||||||||||   |||| ||||||||||| |||||||||    
T  21997622 tgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaat 21997553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 22412220 - 22412302
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||| |  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||    
T  22412220 agcttagttaaataacgataa-caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 22412302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19660923 - 19660884
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19660923 tgcagcttagttaaataacaaacagcaacataggcagtat 19660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 22144082 - 22144216
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||||||||||||| ||||||||||||| |||||  | |||| ||||| ||||  ||||||| | ||| ||| |||||||| |  ||| || |     
T  22144082 tgcagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatctcaaacattcatat 22144181  T
Q  99 attcttcaagtaatgcataaac-attatatcacat 132  Q
    ||  ||||||||||||||| || ||||||||||||    
T  22144182 ataattcaagtaatgcatatacaattatatcacat 22144216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22959620 - 22959581
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  22959620 tgcagcttagttaaataacaaacagcaacataggcagtat 22959581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21565575 - 21565659
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacat 83  Q
    |||||||||||||||||||||| | ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||    
T  21565575 tgcagcttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaatgcaagtcatcaacat 21565659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 22412333 - 22412388
Alignment:
Q  125 tatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaa 180  Q
    ||| ||||||||||||||| | ||| |||||| ||| |||||||||||||||||||    
T  22412333 tatgacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36314610 - 36314649
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  36314610 tgcagcttagttaaataacaaacagcaacataggtagtat 36314649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21502244 - 21502156
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagta--tacaacagcatgacataattatatcaaattcaattcatcaacatctta 87  Q
    ||||||||||||||  |||||||| ||||||||||||||  || | |||||||| ||||  ||||| ||| ||| |||||| |||||||    
T  21502244 tgcagcttagttaataaacaaacagcaacataggcagtatgtaaatcagcatgatataacaatatcgaatgcaagtcatcatcatctta 21502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 47031 - 47228
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 103  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||||    
T  47031 agcttagttaaataacaaacaacaacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattct 47130  T
Q  104 tcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcct 203  Q
     ||||||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||      ||||||||||||||||||||||    
T  47131 ccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagattata------ctcattgttaagtcttaatcct 47224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20698523 - 20698322
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   ||||||||| |||| ||||||| | |||||||||||||||||||  || ||||    
T  20698523 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattcaaa 20698425  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
     ||||||||||||||||||||||||||||||||||||||||||||  | ||| |||||  ||| |||||||||||||||||||| ||||  |||||||||    
T  20698424 tattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattataattaacatcatcattaagtctt 20698325  T
Q  198 aat 200  Q
    |||    
T  20698324 aat 20698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13442307 - 13442509
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| |  |||||||||||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  13442307 tgcagcttagttaaataacaa-cggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 13442405  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  13442406 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 13442505  T
Q  197 taat 200  Q
    ||||    
T  13442506 taat 13442509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17487889 - 17488091
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  17487889 tgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 17487987  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||| |||  ||||||||||||||||||| ||||  ||||||||    
T  17487988 tattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagattataattaacatcatcattaagtct 17488087  T
Q  197 taat 200  Q
    ||||    
T  17488088 taat 17488091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12399242 - 12399451
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||||||   || ||||    
T  12399242 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaaa 12399340  T
Q  98 cattcttcaagtaatgcataa-acattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     | |  ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| | | |||||||||||||| |||||||| |  ||| ||||    
T  12399341 taattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattatagttaacctcttcattatgtct 12399440  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  12399441 taatgctaccc 12399451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 14576915 - 14576712
Alignment:
Q  6 cttagttaaataacaaacatcaacataggcagtata--caacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattct 103  Q
    |||||||||||||||| || |||||||| |||||||  ||||||||||||||||| ||||||| | ||| ||| ||||||||||   || |||  || ||    
T  14576915 cttagttaaataacaa-cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
Q  104 tcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||| ||||  |||| ||||||| |    
T  14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatcattaaatcttaatac 14576717  T
Q  203 taccc 207  Q
    |||||    
T  14576716 taccc 14576712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17499371 - 17499573
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  17499371 tgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 17499469  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||||| ||||||||||||||||| |||||||| | ||| |||||| |||  |||||| |||||||||||| ||||  ||||||||    
T  17499470 tattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattataattaacatcatcattaagtct 17499569  T
Q  197 taat 200  Q
    ||||    
T  17499570 taat 17499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 14972887 - 14973096
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| ||  |||||      
T  14972887 tgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatacatt 14972985  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  ||||||||||||||| |||||||||||||||||||||||||| | ||| |||||| ||| ||||| |||||||||||||| ||||  ||||||||    
T  14972986 cataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtct 14973085  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  14973086 caatactaccc 14973096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 18438570 - 18438776
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||| || |||||||||||||||||||   |||||||| ||||| ||||||||| ||| ||| ||||||||| |  |||||  |||    
T  18438570 agcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacattcat 18438668  T
Q  101 tcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
       |||||||||||||| ||||||||||||||||||| |||||| | ||| |||||| ||| |||||||||||||| ||||| ||||  |||||||| ||    
T  18438669 atctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtctcaa 18438768  T
Q  200 tcctaccc 207  Q
    | ||||||    
T  18438769 tactaccc 18438776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 43840965 - 43841162
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||| ||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  43840965 tgcagcttagttaaataacaa-caacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaat 43841063  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtc 195  Q
     || |||||||||||||| | |||||||||||||| ||||||||||| | ||| |||||| ||| |||||||||||||||||||| || | ||||||||    
T  43841064 tatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcgttaagtc 43841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 26686920 - 26687103
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || | |     
T  26686920 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattccat 26687018  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
     || |||||||||||||| | |||||||||||||| ||||||||||| | ||| |||||| ||| ||||||||||||||||||||    
T  26687019 tatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 26687103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 24153296 - 24153115
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||| |  | ||||||||| |||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||      
T  24153296 tgcagcttagttaaataacgat-agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaatt 24153198  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaa 180  Q
    || |||||| ||||||| | ||||| |||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||    
T  24153197 atacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 14572622 - 14572830
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||| ||||||||||  |||||||||||||| ||||||| |   | ||| ||||||||||   || |||      
T  14572622 tgcagcttagttaaataacaa-cagcaacatagacagtatacaaaacagcatgacataataatatcaattgagagtcaacaacatcttaaatattcaatt 14572720  T
Q  99 attcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||| ||||| | ||| |||||||||||||||||| |||||   ||| |||||| ||||||||||| |||||||||||| ||||  |||||||||    
T  14572721 atacttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatcattaagtctt 14572820  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  14572821 aatactaccc 14572830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 40213805 - 40213600
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtataca---acagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||| |||||||| || |||||||||   ||| ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||    
T  40213805 agcttagttaaataacaa-catcaacacag-cagtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcat 40213708  T
Q  101 tcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
      | |||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| ||| |||||||||||||||| ||||  |||||||| ||    
T  40213707 aatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaacatcatcattaagtctcaa 40213608  T
Q  200 tcctaccc 207  Q
    | ||||||    
T  40213607 tactaccc 40213600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23083449 - 23083241
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||||||||||  | |||||||||||||||||||   ||| |||||||||| ||||||| | ||| ||| ||||||||||   || |||     
T  23083449 tgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaat 23083351  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
      | |||| ||||||||| | |||||||||||||||||||||||| | | ||| |||||| ||| ||||||||||| |||||||| ||||   |||||||    
T  23083350 tttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcatcactaagtct 23083251  T
Q  197 taatcctacc 206  Q
    |||| |||||    
T  23083250 taatactacc 23083241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 16796685 - 16796789
Alignment:
Q  104 tcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||| |||||| ||||||||||| |||||||||| |||| |  |||||||||||| |    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgc 16796784  T
Q  203 taccc 207  Q
    |||||    
T  16796785 taccc 16796789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 14179570 - 14179648
Alignment:
Q  104 tcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||    
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 14179648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 25476470 - 25476265
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||| ||||| || ||||| ||| |||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||    
T  25476470 agcttagttaaaaaacaa-cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcat 25476372  T
Q  101 tcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
      ||||||||||||  | |||||||||||||||||| |||| || | ||| |||||| ||| ||||||||||| |||||||| || |  |||||||| ||    
T  25476371 aattcaagtaatgcgcataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgtaattaacatcctcattaagtctcaa 25476272  T
Q  200 tcctacc 206  Q
    | |||||    
T  25476271 tactacc 25476265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 42386443 - 42386632
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||| ||||||||||||||| || |||||||||||||||||||   |||||||||||||  ||||||||| ||| ||| |||||||| |   || ||      
T  42386443 tgcagtttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcatt 42386541  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatctt-atacaacttcacagattataattaacctcat 186  Q
    |||  |||||| |||||||| |||||||||||||||||||||||||| | | | ||||| | ||| ||||||||||||| |||||| ||||    
T  42386542 cataattcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaacatcat 42386632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 11424847 - 11424642
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  |||||||||||||  |||||||   |||   |||||||||| |   || ||  |    
T  11424847 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattatgcattc 11424752  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    ||  |||||||||||| || |||||||||||||||||||| ||||  | ||| |||||| ||| |||||||||||| ||||||| |||   ||||||||     
T  11424751 ataattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacattaagtctc 11424652  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  11424651 aatactaccc 11424642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 856234 - 856304
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcata 136  Q
    ||||||||||| |||||||||||| ||||||  | |||||||||||| |||||||||||||  ||||||||    
T  856234 aattcaattcaacaacatcttatgtatacaattaatcttcaagtaatacataaacattataatacatcata 856304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 52523817 - 52523670
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||  | |||||  ||||| ||||  ||||| ||| ||| ||| |||||||| |  ||| ||     
T  52523817 tgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagttcatgatataacaatatcgaatgcaaatcaacaacatctcaaacattcat 52523718  T
Q  97 acattcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
    | ||  ||||||||||||||| || |||||||||||| |||| |||||    
T  52523717 atataattcaagtaatgcatatacaattatatcacattataaacaaca 52523670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12174347 - 12174308
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12174347 tgcagcttagttaaataacaaacagcaacataggcagtat 12174308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15470957 - 15471043
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  15470957 tgcagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32307710 - 32307749
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32307710 tgcagcttagttaaataacaaacagcaacataggcagtat 32307749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49668164 - 49668125
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  49668164 tgcagcttagttaaataacaaacagcaacataggcagtat 49668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14234520 - 14234605
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 84  Q
    ||||||||||||||||||||| || ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  14234520 tgcagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 14234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17672656 - 17672737
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || |||||||| ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  17672656 tgcagcttagttaaataacaa-caacaacatag-cagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 17672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9512953 - 9512992
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  9512953 tgcagcttagttaaacaacaaacagcaacataggcagtat 9512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9520928 - 9520967
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  9520928 tgcagcttagttaaacaacaaacagcaacataggcagtat 9520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13210415 - 13210376
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  13210415 tgcagcttagttaaataacaaatagcaacataggcagtat 13210376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 16097361 - 16097396
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  16097361 tgcagcttagttaaataacaaacaacaacataggca 16097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36166628 - 36166712
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||||||||| || | ||| || ||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||    
T  36166628 tgcagcttagttaaataacaa-cagcgacacag-cagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 36166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9707739 - 9707658
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  9707739 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatacaagtcaacaac 9707658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29172715 - 29172634
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 81  Q
    ||||||||||||||||||||| || ||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  29172715 tgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 29172634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28194723 - 28194755
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacatag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28194723 tgcagcttagttaaataacaaacagcaacatag 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37251256 - 37251216
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtata 41  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  37251256 tgcagcttagttaataaacaaacagcaacataggcagtata 37251216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13244 - 13446
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  13244 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 13342  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||| ||| ||||||| |||||||||||| ||||  ||||||||    
T  13343 tattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattataattaacatcatcattaagtct 13442  T
Q  197 taat 200  Q
    ||||    
T  13443 taat 13446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 1136 - 928
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  1136 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 1038  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
     ||| |||||||||||||||||||||||||||||||||||||||| |  ||| |||||| ||| ||||| ||||||||||||||||| |  |||||||||    
T  1037 tattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtctt 938  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  937 aatgctaccc 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 168066 - 167858
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  168066 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 167968  T
Q  98 cattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
     ||| |||||||||||||||||||||||||||||||||||||||| |  ||| |||||| ||| ||||| ||||||||||||||||| |  |||||||||    
T  167967 tattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtctt 167868  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  167867 aatgctaccc 167858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 51946 - 52155
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||||||||| |||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||     
T  51946 tgcagcttagttaaataacaa-cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaat 52044  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | |||||||||||||| ||||||| ||| | ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||    
T  52045 tatacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtct 52144  T
Q  197 taatcctaccc 207  Q
    |||| ||||||    
T  52145 taatactaccc 52155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 3506 - 3712
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||    
T  3506 agcttagttaaataactaa-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat 3604  T
Q  101 tcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
    ||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||| |||||||||||||| || |  |||||||||||    
T  3605 tcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcctcattaagtcttaa 3704  T
Q  200 tcctaccc 207  Q
    | ||||||    
T  3705 tactaccc 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 376 - 584
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaaca--gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||||||||||||||  || |||||||||||||||||| |  ||||||| |||| ||||||| |  || ||| ||||||||||   || | |      
T  376 tgcagcttagttaaataacaacaat-aacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcgatt 474  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||| | |||||||||||| || |  ||||||||     
T  475 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctcattaagtctc 574  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  575 aatactaccc 584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 39510 - 39718
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  39510 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattc 39608  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    ||  ||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||| |||||||||||||| ||||| ||||||||     
T  39609 ataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtctc 39708  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  39709 aatactaccc 39718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 75302 - 75094
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  75302 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattc 75204  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    ||  ||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||| |||||||||||||| ||||| ||||||||     
T  75203 ataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtctc 75104  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  75103 aatactaccc 75094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 1884 - 2086
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || ||||    
T  1884 tgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaa 1982  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| | | |||||||||||||||||||| || |  ||||||||    
T  1983 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtct 2082  T
Q  197 taat 200  Q
    ||||    
T  2083 taat 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6212 - 6007
Alignment:
Q  1 tgcagcttagttaaataacaa--acatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcataca 95  Q
    |||||||||||||||||||||  ||| ||||||||| |||||||||   ||||||||||| || ||||||| | ||||||||||||||||||   || ||    
T  6212 tgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatattca 6113  T
Q  96 aacattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagt 194  Q
    || ||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||  ||||||||||| ||||  ||||||    
T  6112 aatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacattttataattaacatcatcattaagt 6013  T
Q  195 cttaat 200  Q
    ||||||    
T  6012 cttaat 6007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 1985 - 2194
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||||||||| |||||| || | |||||||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || ||||    
T  1985 tgcagcttagttaattaacaa-cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattcaaa 2083  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||| ||| ||| ||||| | |||||| ||  ||||||||    
T  2084 cattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatattattaataaccttatcattaagtct 2183  T
Q  197 taatcctaccc 207  Q
    |||||||||||    
T  2184 taatcctaccc 2194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 4882 - 5059
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||| ||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||||| ||||||| |||||||||| | || ||||    
T  4882 tgcagattagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaaa 4980  T
Q  98 cattcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattata 175  Q
     | |  |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  4981 taattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattata 5059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 38794 - 39002
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||| |||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||      
T  38794 tgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaatt 38892  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  |||||||||    
T  38893 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctt 38992  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  38993 aatactaccc 39002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 32975 - 33153
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||| |||||||||||  | |||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||      
T  32975 tgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaatt 33073  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataat 177  Q
    || |||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||    
T  33074 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 24391 - 24206
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||    |||||||||||||  ||||||| | ||||||||||||||||||   || |||    
T  24391 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaa 24293  T
Q  97 acattcttcaagtaatgcata-aacattatatcacatcataa-tcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    | ||||||||||||||||| | |||||||||||||||||||| |||||| | ||| |||||| ||| ||||||||||||||||||||    
T  24292 atattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaac 24206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 174799 - 174943
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |  ||| ||  |||    
T  174799 tgcagcttagttaaataacaaacagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcattcat 174898  T
Q  101 tcttcaagtaatgca--taaacattatatcacatcataatcaaca 143  Q
      |||||||||||||  ||||||||||||||| ||||| ||||||    
T  174899 aattcaagtaatgcaactaaacattatatcacgtcatattcaaca 174943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 124679 - 124820
Alignment:
Q  60 atatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttata 158  Q
    ||||||| | |||||||||||| | |||   || |||| ||||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||| |    
T  124679 atatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaa 124778  T
Q  159 caacttcacagattataattaacctcattgttaagtcttaat 200  Q
    || |||||||||||||||||||| || |  ||||||||||||    
T  124779 cagcttcacagattataattaacatcctcattaagtcttaat 124820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 3238 - 3030
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |    
T  3238 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattc 3140  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    ||  ||||||||||||||| |||||||||||||||||||||||||| | ||  |||||| ||| |||||||| ||||||||||| ||||  ||||||||     
T  3139 ataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttataattaacatcatcattaagtctc 3040  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  3039 aatactaccc 3030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 207
Target Start/End: Original strand, 6669 - 6852
Alignment:
Q  28 acataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-catt 123  Q
    |||||||||||||||||   || ||||||||||| |||||||   ||||||| ||||||||||   || |||||||| ||||||||||||||||| | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  124 atatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||||||||||||||||||||| ||||||| |||||| ||| ||||||||||| |||||| ||  |||| ||||||||||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataaccttatcattaaatcttaatcctaccc 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 26153 - 25944
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| |||||||||  |||||| |||| ||| | | |||||      
T  26153 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatacatt 26055  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||| |  |||||||||||||||||||||||||| | ||| |||||| ||| ||||| |||||||||||||| ||||  ||||||||    
T  26054 cataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtct 25955  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  25954 caatactaccc 25944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44795 - 44709
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||||||||| || ||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  44795 tgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 33463 - 33374
Alignment:
Q  118 aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||||||||||||||||||||||||| | ||  |||||| ||| ||||| || ||||||||||| ||||  |||||||| ||| ||||||    
T  33463 aacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccc 33374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 340035 - 339829
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||  || |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |    
T  340035 tgcagcttagttaaataaca--caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtatacattc 339939  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    ||  |||||||||||  || |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  ||||||||     
T  339938 ataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatcattaagtctc 339839  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  339838 aatactaccc 339829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 71353 - 71474
Alignment:
Q  21 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcat-a 117  Q
    |||| |||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||  | || ||||  |||||| | ||||||||| |    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 71451  T
Q  118 aacattatatcacatcataatca 140  Q
    ||||||||||||||| |||||||    
T  71452 aacattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 20946 - 21153
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat 100  Q
    ||||||||||| |||||| || ||||||||||| ||| |||   || ||||||||||| ||||||| | ||||||| |||||||||||  || ||||  |    
T  20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgt 21045  T
Q  101 tcttcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaa 199  Q
    ||| ||||||||||||||| ||||||||||||||||||||| || | ||| |||||| ||| |||||||| ||||||||||| || |  |||||||||||    
T  21046 tctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatcttcattaagtcttaa 21145  T
Q  200 tcctaccc 207  Q
    | ||||||    
T  21146 tactaccc 21153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 17305 - 17094
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa-----cagcatgacataattatatcaaattcaattcatcaacatcttatgcataca 95  Q
    ||||||||||||||||||||| || |||||||||||||||||||     |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||    
T  17305 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtataca 17207  T
Q  96 aacattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagt 194  Q
      |||  |||||||||||| |  |||||||||||||||||||||||||| | |||  ||||| ||| ||| |||||||||||||||| ||||  ||||||    
T  17206 ttcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagattataattaacatcatgattaagt 17107  T
Q  195 cttaatcctaccc 207  Q
    || ||| ||||||    
T  17106 ctcaatactaccc 17094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 4544 - 4749
Alignment:
Q  5 gcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 101  Q
    ||||||||||||||||| || ||||| | |||||||| ||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||     
T  4544 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 4642  T
Q  102 cttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
     |||||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  |||||||| |||    
T  4643 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 4742  T
Q  201 cctaccc 207  Q
     ||||||    
T  4743 actaccc 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 12126 - 12331
Alignment:
Q  5 gcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 101  Q
    ||||||||||||||||| || ||||| | |||||||| ||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||     
T  12126 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 12224  T
Q  102 cttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
     |||||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  |||||||| |||    
T  12225 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 12324  T
Q  201 cctaccc 207  Q
     ||||||    
T  12325 actaccc 12331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 22078 - 22283
Alignment:
Q  5 gcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 101  Q
    ||||||||||||||||| || ||||| | |||||||| ||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||     
T  22078 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 22176  T
Q  102 cttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
     |||||||||||| || |||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||||| ||||  |||||||| |||    
T  22177 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 22276  T
Q  201 cctaccc 207  Q
     ||||||    
T  22277 actaccc 22283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 26911 - 26999
Alignment:
Q  54 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  26911 ataattatatcaa-ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaaca 26999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 27911 - 28072
Alignment:
Q  47 gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacatcataatcaacaac 145  Q
    |||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| |||||||||||||||||||||||||| |    
T  27911 gcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatc 28010  T
Q  146 gacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
     ||| |||||| |||||||||||| ||||||||||| ||||  |||||||| ||| ||||||    
T  28011 aacaaatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccc 28072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22916 - 23124
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| |  ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||     
T  22916 tgcagcttagttaaataacaa-cagcaacacac-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaat 23013  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
     || |||||||||||||| | |||||||||||||||| ||||||||| | ||| |||||| ||| ||||||||||||||| |||| ||||  ||||||||    
T  23014 tatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaataacatcatcattaagtct 23113  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  23114 caatactaccc 23124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16688 - 16479
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || ||||| | |||||||||   |||||||||||||||| |||||||||  || ||| || ||||| | | |||||      
T  16688 tgcagcttagttaaataacaa-cagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatacatt 16590  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
    |||  |||||||||||| || ||||||||||||||||| |||||||| | ||| |||||| ||| ||||||||| |||||||||| ||||  ||||||||    
T  16589 cataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcatcattaagtct 16490  T
Q  197 taatcctaccc 207  Q
     ||| ||||||    
T  16489 caatactaccc 16479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3274 - 3103
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||||| || |||||||||||||||||||   |||||||| ||||| |||||||||  |||||| |||||||| | | |||||      
T  3274 tgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatacatt 3176  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacag 169  Q
    |||  |||||||||||| |  |||||||||||||||||||||||||| | ||| |||||| ||| ||||||||    
T  3175 cataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 1052 - 1156
Alignment:
Q  104 tcaagtaatgcataaa-cattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcc 202  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||| |||| |  |||||||||||| |    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatac 1151  T
Q  203 taccc 207  Q
    |||||    
T  1152 taccc 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 8617 - 8438
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||||||||     |||||||||||||||  | |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||      
T  8617 tgcagcttagttaaataacag----caacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatt 8522  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    || |||||||||||||| | |||||||||||||| ||||||||||| | ||| |||||| ||| ||||||||||||||||||||    
T  8521 atacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 8438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 25932 - 26137
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 101  Q
    ||||||||||||||||||  | ||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  ||     
T  25932 agcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattata 26030  T
Q  102 cttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||  |||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||||||||| || |  |||||||| |||    
T  26031 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctcattaagtctcaat 26130  T
Q  201 cctaccc 207  Q
     ||||||    
T  26131 gctaccc 26137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 39894 - 40099
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacatt 101  Q
    ||||||||||||||||||  | ||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  ||     
T  39894 agcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattata 39992  T
Q  102 cttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaat 200  Q
    |||||||||||||||  |||||||||||||||||||||||||| | ||  |||||| ||| ||||||| |||||||||||| || |  |||||||| |||    
T  39993 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctcattaagtctcaat 40092  T
Q  201 cctaccc 207  Q
     ||||||    
T  40093 gctaccc 40099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 13141 - 13308
Alignment:
Q  18 acaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgc 114  Q
    ||||||| |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  115 ata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaac 181  Q
    | | |||||||||||||| ||||||||||| | ||| |||||| |||  |||||||||||||||||||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaac 13308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 34158 - 34200
Alignment:
Q  3 cagcttagttaaataacaaacatcaacataggcagtatacaac 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34158 cagcttagttaaataacaaacaacaacataggcagtatacaac 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 39946 - 40154
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||| |||||||||||  | |||||||||||||||||||  || ||||||||||| ||||||||| ||  |||  |||||||||   ||   |      
T  39946 tgcagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttgatt 40044  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtctt 197  Q
    || |||||||||||||| | |||||||||||||||||||||||||| | ||| ||| || | | |||||||||||||||||||| ||||  ||||||||     
T  40045 atacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatcattaagtctc 40144  T
Q  198 aatcctaccc 207  Q
    ||| ||||||    
T  40145 aatactaccc 40154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 12857 - 12933
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaac 142  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  ||||||||||||||    
T  12857 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 12933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 1975 - 2045
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcata 136  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||  ||||||||    
T  1975 aattcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcata 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 3574 - 3429
Alignment:
Q  43 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacatcataatcaa 141  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||||||||||||||||||    
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  142 caacgacatatctt-atacaacttcacagattataattaacctcat 186  Q
    || | ||| ||||| | ||| ||||| |||||||||||||| ||||    
T  3474 catcaacacatcttaaaacagcttcatagattataattaacatcat 3429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 21826 - 21749
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  ||||| |||||||||    
T  21826 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaaca 21749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 29718 - 29641
Alignment:
Q  66 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaaca 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||  ||||| |||||||||    
T  29718 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaaca 29641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8499 - 8585
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  8499 tgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 8585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6568 - 6607
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6568 tgcagcttagttaaataacaaacagcaacataggcagtat 6607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 3640 - 3723
Alignment:
Q  124 atatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||| |||| |  |||||||||||| ||||||    
T  3640 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactaccc 3723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 7704 - 7787
Alignment:
Q  124 atatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||| |||| |  |||||||||||| ||||||    
T  7704 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactaccc 7787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27837 - 27692
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    ||||||||||||||  |||||||| ||||||||| |||||  | |||||||||| ||||  |||||||||  || ||| |||||||| |  ||| || |     
T  27837 tgcagcttagttaataaacaaacaacaacataggtagtatgcaaaacagcatgatataacaatatcaaatgtaaatcaacaacatctcaaacattcacat 27738  T
Q  99 attcttcaagtaatgcataaac-attatatcacatcataatcaaca 143  Q
    ||  ||| ||||||||||| || |||||||||||| |||| |||||    
T  27737 ataattctagtaatgcatatacaattatatcacattataaccaaca 27692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 15483 - 15362
Alignment:
Q  21 aacatcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcat-a 117  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    || ||||  |||||| ||||||||||| |    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 15385  T
Q  118 aacattatatcacatcataatca 140  Q
    ||||||||||||||| |||||||    
T  15384 aacattatatcacattataatca 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8512 - 8715
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||||||| ||||||||||||  | ||||||||| |||||||||   ||| |||||||||| ||||||| | ||| ||| ||||||||||  ||| |||     
T  8512 tgcagcttggttaaataacaat-agcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaacatcttaaacattcaag 8610  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtct 196  Q
      | |||||||||||||| | |||||||    ||||||||||||||| | ||| ||| || ||| ||||||||||| |||||||| ||||  ||||||||    
T  8611 tgtacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcatcattaagtct 8706  T
Q  197 taatcctac 205  Q
    |||| ||||    
T  8707 taatactac 8715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 45; Significance: 8e-17; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28447 - 28536
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttat 88  Q
    ||||||||||||||||||||| || |||||||||||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||||    
T  28447 tgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttat 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11325 - 11364
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11325 tgcagcttagttaaataacaaacagcaacataggcagtat 11364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2030 - 2069
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  2030 tgcagcttagttaaataacaaacacaaacataggcagtat 2069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1065 - 1151
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| | | ||||||||||||    
T  1065 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11531 - 11447
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacat 83  Q
    ||||||||||||||||||||| || ||||||||| |||||||||   || ||||||||||| ||||||| ||||||||||||||||    
T  11531 tgcagcttagttaaataacaa-caacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 11437 - 11392
Alignment:
Q  162 cttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||    
T  11437 cttcacagattataattaacctcatcattaagtcttaattctaccc 11392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 33044 - 32901
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||||||| |||||| || ||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |      
T  33044 tgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-att 32947  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaaca 143  Q
    || |||| ||||||||||| ||||||||| |||||||| |||||||    
T  32946 atacttcgagtaatgcatataacattataacacatcatgatcaaca 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 45961 - 46104
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaac 98  Q
    |||||||||||||| |||||| || ||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |      
T  45961 tgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-att 46058  T
Q  99 attcttcaagtaatgcata-aacattatatcacatcataatcaaca 143  Q
    || |||| ||||||||||| ||||||||| |||||||| |||||||    
T  46059 atacttcgagtaatgcatataacattataacacatcatgatcaaca 46104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 16146 - 16323
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    ||||||||||||||||||| |||| |||||||||||||||||   ||||||| || || || ||||||||| |||  || || ||||| | | |||||      
T  16146 tgcagcttagttaaataac-aacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaagccaacatcatctcaagtatacatt 16244  T
Q  98 cattcttcaagtaatgcata-aacattatatcacatcataatcaacaacgacatatcttatacaacttcacagattataa 176  Q
    |||   |||||||||||||| ||||||||||||| |||| ||||||| | |||| | | | ||| |||||||||||||||    
T  16245 cataactcaagtaatgcatataacattatatcacgtcatgatcaacatcaacatct-taaaacagcttcacagattataa 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 10323 - 10405
Alignment:
Q  125 tatcacatcataatcaacaacgacatatcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    ||||||||||||||||||| | ||| |||||| ||| ||||||||||||| |||||| ||||| |||||||| ||| ||||||    
T  10323 tatcacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccc 10405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10629 - 10543
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  10629 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15694 - 15737
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  15694 tgcagcttagttaaataacaaacagcaacataggcagtatacaa 15737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2733 - 2694
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2733 tgcagcttagttaaataacaaacatcaacataggcagtat 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 100407 - 100493
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  || ||||| ||||| ||||| ||| ||| ||| ||||||||    
T  100407 tgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaatgcaaatcaacaacatct 100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 119908 - 119947
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  119908 tgcagcttagttaaataacaaacagcaacataggcagtat 119947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 101532 - 101571
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  101532 tgcagcttagttaaacaacaaacaacaacataggcagtat 101571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40262 - 40224
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagta 39  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  40262 tgcagcttagttaaataataaacagcaacataggcagta 40224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 1021 - 881
Alignment:
Q  28 acataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattata 126  Q
    |||||||||||||||||||||||| |||||| ||||| ||| ||| ||| ||| |||| |   || ||| |||  ||||||||||||| | |||||||||    
T  1021 acataggcagtatacaacagcatggcataataatatc-aatgcaagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattata 923  T
Q  127 tcacatcataatcaacaacgacatatcttatacaacttcaca 168  Q
    ||||||| ||||| ||| | ||| |||||| ||| |||||||    
T  922 tcacatcgtaatcgacatcaacacatcttaaacagcttcaca 881  T

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Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 12604 - 12687
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  12604 agcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4557 - 4702
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaacagcat---gacataattatatcaaattcaattcatcaacatcttatgcatacaaa 97  Q
    |||| |||||||||||||||| || || |||||||||||| ||||||||    || || || |||||||||  |||||| ||||||||||   || ||      
T  4557 tgcaacttagttaaataacaa-caacagcataggcagtatgcaacagcagcaagatatcataatatcaaatataattcaacaacatcttaaatattcatt 4655  T
Q  98 cattcttcaagtaatgcataa-acattatatcacatcataatcaaca 143  Q
     || ||||||||||||||||| ||||||||||||||||| |||||||    
T  4656 tatacttcaagtaatgcataatacattatatcacatcatgatcaaca 4702  T

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Target: scaffold1765 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1115 - 1154
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1115 tgcagcttagttaaataacaaacaacaacataggcagtat 1154  T

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Target: scaffold0628 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2894 - 2808
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| | ||||||||||||| |||  || ||||| ||||  ||||||||| ||| ||| ||||||||    
T  2894 tgcagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatct 2808  T

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Target: scaffold0357 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13161 - 13247
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||| ||||||||    
T  13161 tgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatct 13247  T

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Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6644 - 6683
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6644 tgcagcttagttaaataacaaacaacaacataggcagtat 6683  T

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Target: scaffold0333; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14024 - 14063
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  14024 tgcagcttagttaaataacaaacaacaacataggcagtat 14063  T

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Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1157 - 1118
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1157 tgcagcttagttaaataacaaacaacaacataggcagtat 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19297 - 19336
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19297 tgcagcttagttaaataacaaacagcaacataggcagtat 19336  T

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Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53637 - 53551
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  53637 tgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 53551  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15865 - 15826
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15865 tgcagcttagttaaataacaaacaacaacataggcagtat 15826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 12980 - 13057
Alignment:
Q  9 agttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 84  Q
    |||||||||||||||| ||||||||||||||| |||  |||||||| ||||  ||||| ||| ||| |||||||||||    
T  12980 agttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaacatc 13057  T

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Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8149 - 8002
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaa 96  Q
    ||||||||| |||||||||||| | || |||||||||||| |||  |||  ||||| ||||| |||||||||  |||||| ||||||||||  ||| ||     
T  8149 tgcagcttaattaaataacaaatagcagcataggcagtatgcaaatcagctcatgatataataatatcaaatgaaattcaacaacatcttaaacattcat 8050  T
Q  97 acattcttcaagtaatgcata-aacattatatcacatcataatcaaca 143  Q
    | ||  ||||||||||| ||| || |||||||||||| |||| |||||    
T  8049 atataattcaagtaatgtatataaaattatatcacattataaacaaca 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 23968 - 23932
Alignment:
Q  4 agcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23968 agcttagttaaataacaaacagcaacataggcagtat 23932  T

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Target: scaffold1984 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 162 - 201
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  162 tgcagcttagttaaacaacaaacaacaacataggcagtat 201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6845 - 6884
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  6845 tgcagctcagttaaataacaaacagcaacataggcagtat 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1122 - 1083
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  1122 tgcagcttagttaaataacaaacaacaacataggtagtat 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5676 - 5715
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  5676 tgcagcttagtaaaataacaaacagcaacataggcagtat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6211 - 6172
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  6211 tgcagcttagttaaataacaaacagtaacataggcagtat 6172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8162 - 8119
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa 44  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  8162 tgcagcttagttaacaaacaaacagcaacataggcagtatacaa 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10560 - 10646
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    ||||||||  |||||||||||||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  10560 tgcagcttttttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10646  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38790 - 38704
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||| ||||||||||||||||||| |||||||| ||||||  | |||| ||||| ||||  ||||||||| ||| ||||||| ||||    
T  38790 tgcaccttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatct 38704  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22758 - 22672
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||||||||||||||||||||||| | |||||| |||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  22758 tgcagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22672  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 62231 - 62270
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  62231 tgcagcttagttaaacaacaaacagcaacataggcagtat 62270  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 60804 - 60761
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa 44  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  60804 tgcagcttagttaataaacaaacagcaacataggcagtatacaa 60761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 129938 - 130024
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 85  Q
    |||| ||||||||||||||| ||| ||||||||||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  129938 tgcatcttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 130024  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 160717 - 160756
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtat 40  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  160717 tgcagcttagttaaataacaatcagcaacataggcagtat 160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12799 - 12884
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatc 84  Q
    |||||||||| ||||||||||||| ||||||||||| ||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  12799 tgcagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 12884  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 128827 - 128917
Alignment:
Q  43 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattatatcacat 132  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||||||| | | |||||||||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgtacataacattatatcacat 128917  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14785 - 14747
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagta 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  14785 tgcagcttagttaactaacaaacagcaacataggcagta 14747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 17922 - 17866
Alignment:
Q  151 atcttatacaacttcacagattataattaacctcattgttaagtcttaatcctaccc 207  Q
    |||||| ||| |||||||||||||||||||| || |  |||||||||||| ||||||    
T  17922 atcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccc 17866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38349 - 38389
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtata 41  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  38349 tgcagcttagttaatgaacaaacagcaacataggcagtata 38389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25139 - 25179
Alignment:
Q  1 tgcagcttagttaaataacaaacatcaacataggcagtata 41  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  25139 tgcagcttagttaataaacaaacagcaacataggcagtata 25179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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