View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20929_high_14 (Length: 250)
Name: NF20929_high_14
Description: NF20929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20929_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 504364 - 504603
Alignment:
| Q |
1 |
aaaaatctaaaatatcatcagatatctattgagatcttgaagattacacaaaaactacaaacaatgctaacatcacagatgcatccaaatcaacgcactt |
100 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
504364 |
aaaaatctaaaatatcatcagatatctattgaggtcttgaagattacacaaaaactacaaacaatgctaacatcacagatgcatccaaatcaacgcactt |
504463 |
T |
|
| Q |
101 |
agtcttgaatagcaagcaactatccaaaacaaaaatctccaaaccaaacaagaagcattcactgcttagaaaccctttagaaaccccaatatgaatatca |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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|
| T |
504464 |
agtcttgaatagcaagcaactatccaaaac-aaaatctccaaaccaaacaagaagcattcactgcttagaaaccctttcgaaaccccaatatgaatatca |
504562 |
T |
|
| Q |
201 |
aatgaaattttataggtcacaccaaaaccaccaagtataat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
504563 |
aatgaaattttataggtcacaccaaaaccaccaagtataat |
504603 |
T |
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