View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20929_high_6 (Length: 310)
Name: NF20929_high_6
Description: NF20929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20929_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 21 - 266
Target Start/End: Complemental strand, 41723315 - 41723070
Alignment:
| Q |
21 |
agataaatagatagataaacataactctttgatgcaggagaacaaaggaggggatcacactagcctcagttagctgtacagaaaacactctacgccctcc |
120 |
Q |
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| T |
41723315 |
agataaatagatagataaacataactctttgatgcaggagaacaaaggaggggatcacactagcctcagttagctgtacagaaaacactctacgccctcc |
41723216 |
T |
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| Q |
121 |
cctaagtagtatgaggagactgagcagcaattctcctctctacaacaaattacatgttgataagtaatacattagcatatgaaaactcaatagagcatgc |
220 |
Q |
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| T |
41723215 |
cctaagtagtatgaggagactgagcagcaattctcctctctacaacaaattacatgttgacaagtaatacattagcatatgaaaactcaatagagcatgc |
41723116 |
T |
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| Q |
221 |
aattaaaagaatatactggaacaccactagcaacagcgggtattca |
266 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
41723115 |
aattaaaagaatatactggaacacaactagcaacagcgggtattca |
41723070 |
T |
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