View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20929_low_27 (Length: 216)
Name: NF20929_low_27
Description: NF20929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20929_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 38345318 - 38345123
Alignment:
| Q |
5 |
atggacatcatcaccctcagttgtcaattcaatgtgtcttcaattcaacgttacttcctcattcccagccatcgagaaaacgactatcacaacaaataag |
104 |
Q |
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| T |
38345318 |
atggccataatcaccctcagttgtcaattcaatgtgtcttcaattcaacgttacttcctcattcccagccatcgagaaaacgactatcaaaacaaataag |
38345219 |
T |
|
| Q |
105 |
tgtaacacgataacacatccttttcctttgtacgtaccatcatcatcacagtgtctagtcctcaaattcactccttcaatctcacccattgcatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
38345218 |
tgtaacacgataacacatccttttcctttgtacgtaccatcatcatcacagtgtctagtcctcacattcactccttcaatctcacccattgcatat |
38345123 |
T |
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