View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2092_high_10 (Length: 388)

Name: NF2092_high_10
Description: NF2092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2092_high_10
NF2092_high_10
[»] chr1 (3 HSPs)
chr1 (25-377)||(38644906-38645260)
chr1 (312-367)||(8245427-8245482)
chr1 (327-365)||(42107036-42107074)
[»] chr4 (8 HSPs)
chr4 (313-370)||(34816749-34816806)
chr4 (312-370)||(29061614-29061672)
chr4 (312-365)||(38516118-38516171)
chr4 (312-361)||(53142176-53142225)
chr4 (319-365)||(40608216-40608262)
chr4 (320-365)||(38064753-38064798)
chr4 (321-365)||(34121098-34121142)
chr4 (319-367)||(40835464-40835512)
[»] chr8 (4 HSPs)
chr8 (314-370)||(35561215-35561271)
chr8 (312-370)||(30610849-30610907)
chr8 (322-361)||(10975786-10975825)
chr8 (319-365)||(3771630-3771676)
[»] scaffold0635 (1 HSPs)
scaffold0635 (312-367)||(4323-4378)
[»] chr2 (3 HSPs)
chr2 (312-367)||(10042692-10042747)
chr2 (312-367)||(6407940-6407995)
chr2 (312-365)||(30856621-30856674)
[»] chr6 (6 HSPs)
chr6 (319-365)||(33940958-33941004)
chr6 (322-370)||(9466653-9466701)
chr6 (319-370)||(23126832-23126883)
chr6 (312-370)||(2091378-2091436)
chr6 (312-361)||(278194-278243)
chr6 (313-370)||(19101359-19101416)
[»] chr3 (6 HSPs)
chr3 (312-382)||(50174026-50174096)
chr3 (320-364)||(50293690-50293734)
chr3 (314-370)||(54026694-54026750)
chr3 (319-361)||(19582343-19582385)
chr3 (312-361)||(25750879-25750928)
chr3 (312-365)||(44685373-44685426)
[»] chr7 (2 HSPs)
chr7 (314-365)||(31446663-31446714)
chr7 (322-362)||(38735908-38735948)
[»] chr5 (3 HSPs)
chr5 (312-370)||(28979068-28979126)
chr5 (312-365)||(38734677-38734730)
chr5 (312-364)||(33388724-33388776)


Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 25 - 377
Target Start/End: Original strand, 38644906 - 38645260
Alignment:
Q  25 gtttataatatttctcgatagatcaatattacttttgtgtatgtaatcacctctgattctctaaatacacaccataacttcaaaaattgggtattgttcc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38644906 gtttataatatttctcgatagatcaatattacttttgtgtatgtaatcacctctgattctctaaatacacaccataacttcaaaaattgggtattgttcc 38645005  T
Q  125 cttttgaaaacataaatcaatctcaaagaggttgatgaagaaggatatcttgtggtggtggtggtttgccaagtgggaaggtacatgaaaaaggtacttt 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38645006 cctttgaaaacataaatcaatctcaaagaggttgatgaagaaggatatcttgtggtggtggtggtttgctaagtgggaaggtacatgaaaaaggtacttt 38645105  T
Q  225 gatagcaaagttagtttaagtataatatagtaaaaaggattagtctaaataaaaatattttaacacacactataaacta--nnnnnnnnaaaagataata 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||    
T  38645106 gatagcaaagttagtttaagtataatatagtaaaaaggattagtctaaataaaaatattttaacacacactataaactattttttttttaaaagagaata 38645205  T
Q  323 aaattaaatgatgtcaattgatgtgattaaattatttttgtttaatttggttcat 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38645206 aaattaaatgatgtcaattgatgtgattaaattatttttgtttaatttgattcat 38645260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 367
Target Start/End: Original strand, 8245427 - 8245482
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 367  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  8245427 aaaagagaataaaattaaatgatgttgattgatgtgatttaattatttttgtttaa 8245482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 42107074 - 42107036
Alignment:
Q  327 taaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  42107074 taaatgatgttaattgatgtgatttaattatttttgttt 42107036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 34816806 - 34816749
Alignment:
Q  313 aaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  34816806 aaagagaataaaattaaatgatgtcaattgacgtgactaaattatttttgtttaattt 34816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 29061614 - 29061672
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||||| ||||||| |||||||||||||||||| |||||||||| |||||| |||||||    
T  29061614 aaaagagaataaaagtaaatgatgtcaattgatatgattaaattgtttttgcttaattt 29061672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 38516118 - 38516171
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||| ||||||||    
T  38516118 aaaagagaataaaattaaatgatgttgattgatgtgatttaattaattttgttt 38516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 53142176 - 53142225
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattattttt 361  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  53142176 aaaagaaaataaaattaaatgatgttgattgatgtgatttaattattttt 53142225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 40608262 - 40608216
Alignment:
Q  319 aataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||||||||||||||| | ||||||||||||| | ||||||||||||    
T  40608262 aataaaattaaatgatattaattgatgtgattgatttatttttgttt 40608216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 38064753 - 38064798
Alignment:
Q  320 ataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    ||||||||||||||||| |||||||| || ||||||| ||||||||    
T  38064753 ataaaattaaatgatgttaattgatgagactaaattaattttgttt 38064798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 34121142 - 34121098
Alignment:
Q  321 taaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    ||||| ||||||||||  ||||||||||||| |||||||||||||    
T  34121142 taaaactaaatgatgttgattgatgtgattatattatttttgttt 34121098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 40835512 - 40835464
Alignment:
Q  319 aataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 367  Q
    |||||||||||||||| | | ||||||||| ||| ||||||||||||||    
T  40835512 aataaaattaaatgatattagttgatgtgactaatttatttttgtttaa 40835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 35561271 - 35561215
Alignment:
Q  314 aagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  35561271 aagagaataacattaaatgatgtcaattgatgtaattatattatttttgtttaattt 35561215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 30610907 - 30610849
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||||| ||||||| |||||||| |  |||||||||||||||| |||||||||||||||    
T  30610907 aaaagaaaataaaactaaatgatattgattgatgtgattaaataatttttgtttaattt 30610849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 361
Target Start/End: Original strand, 10975786 - 10975825
Alignment:
Q  322 aaaattaaatgatgtcaattgatgtgattaaattattttt 361  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  10975786 aaaattaaataatgtcaattgatgtgactaaattattttt 10975825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 3771630 - 3771676
Alignment:
Q  319 aataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    ||||||| ||||||||||  ||||||||||||| |||||||||||||    
T  3771630 aataaaactaaatgatgttgattgatgtgattatattatttttgttt 3771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 4378 - 4323
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 367  Q
    |||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  4378 aaaagagaataaaattaaatgatttcaatttatgtgattaaattaattttgtttaa 4323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 367
Target Start/End: Original strand, 10042692 - 10042747
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 367  Q
    |||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  10042692 aaaagagaataaaattaaatgatttcaatttatgtgattaaattaattttgtttaa 10042747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 6407995 - 6407940
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 367  Q
    |||||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  6407995 aaaagagaataaaactaaatgatgttgattgatgtgatttaattatttttgtttaa 6407940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 30856674 - 30856621
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||||| || ||||||||||||| | ||||||||||| ||||||||||||||||    
T  30856674 aaaagagaaaaaaattaaatgatattaattgatgtgactaaattatttttgttt 30856621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 33940958 - 33941004
Alignment:
Q  319 aataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  33940958 aataaaattaaatgatgttgattgatgtgattaaattatttttgttt 33941004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 9466701 - 9466653
Alignment:
Q  322 aaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||||||||| || ||||||||| | |||||||||||||||||||||||    
T  9466701 aaaattaaataatatcaattgatataattaaattatttttgtttaattt 9466653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 370
Target Start/End: Complemental strand, 23126883 - 23126832
Alignment:
Q  319 aataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||||||||||| |||||  |||||||||||| ||||||||||| |||||||    
T  23126883 aataaaattaaacgatgttgattgatgtgatttaattatttttgattaattt 23126832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 2091436 - 2091378
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||||| ||||||||| ||| || | |||||||||||||||||||||||| ||| ||||    
T  2091436 aaaagagaataaaattcaataatattaattgatgtgattaaattatttttattttattt 2091378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 278194 - 278243
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattattttt 361  Q
    |||||| |||||||| |||||| ||  |||||||||||||||||||||||    
T  278194 aaaagagaataaaatcaaatgacgttgattgatgtgattaaattattttt 278243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 19101416 - 19101359
Alignment:
Q  313 aaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    ||||| ||||||||||||| |||||||||||| | |||||||  ||||| ||||||||    
T  19101416 aaagagaataaaattaaataatgtcaattgatataattaaatactttttctttaattt 19101359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 50174026 - 50174096
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaatttggttcatctcac 382  Q
    |||||| ||||||||| ||| |||||||||||||||| |||||||||||| || ||||| |||||| ||||    
T  50174026 aaaagagaataaaattgaataatgtcaattgatgtgactaaattatttttcttaaattttgttcatttcac 50174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 50293734 - 50293690
Alignment:
Q  320 ataaaattaaatgatgtcaattgatgtgattaaattatttttgtt 364  Q
    |||||||||||||||||  |||||||||||| |||||||||||||    
T  50293734 ataaaattaaatgatgttgattgatgtgatttaattatttttgtt 50293690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 54026694 - 54026750
Alignment:
Q  314 aagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||| |||||||||| ||||| ||| |||||||||||||||  ||||||||||||||    
T  54026694 aagaaaataaaattagatgatatcatttgatgtgattaaatattttttgtttaattt 54026750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 19582385 - 19582343
Alignment:
Q  319 aataaaattaaatgatgtcaattgatgtgattaaattattttt 361  Q
    ||||||||||||||||||  |||||||||||| ||||||||||    
T  19582385 aataaaattaaatgatgttgattgatgtgatttaattattttt 19582343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 25750928 - 25750879
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattattttt 361  Q
    |||||| ||||||||||||||||||  |||||||| ||| ||||||||||    
T  25750928 aaaagaaaataaaattaaatgatgttgattgatgtaatttaattattttt 25750879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 44685426 - 44685373
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||||| ||| ||||| |||||| | ||||||||||||||||||| ||||||||    
T  44685426 aaaagagaatgaaattcaatgatattaattgatgtgattaaattagttttgttt 44685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 31446663 - 31446714
Alignment:
Q  314 aagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||| ||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  31446663 aagagaataaaattaaatgatgttgattgatatgaataaattatttttgttt 31446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 38735908 - 38735948
Alignment:
Q  322 aaaattaaatgatgtcaattgatgtgattaaattatttttg 362  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  38735908 aaaattaaatgatgttgattgatgtgatttaattatttttg 38735948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 28979126 - 28979068
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 370  Q
    |||||||||||||||| ||| | |||||||||| |||||||||  ||||| ||||||||    
T  28979126 aaaagataataaaattgaataaagtcaattgatatgattaaatattttttctttaattt 28979068  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 38734677 - 38734730
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 365  Q
    |||||| ||||||| ||||||||||  |||||||||||  ||||||||||||||    
T  38734677 aaaagagaataaaactaaatgatgttgattgatgtgatctaattatttttgttt 38734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 33388776 - 33388724
Alignment:
Q  312 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtt 364  Q
    |||||||||| ||||| |||||| | ||||||||||| ||||||| |||||||    
T  33388776 aaaagataattaaattcaatgatattaattgatgtgactaaattagttttgtt 33388724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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