View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2092_low_2 (Length: 593)
Name: NF2092_low_2
Description: NF2092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2092_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 554; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 1 - 574
Target Start/End: Original strand, 7066761 - 7067334
Alignment:
| Q |
1 |
aaaatggcacacatggtcttactctgcttgttgaacccaatcagccaaggattcgtcagccaaggcaccctcagcagcctgttggacagaagcatctcct |
100 |
Q |
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| T |
7066761 |
aaaatggcacacatggtcttactctgcttgttgaacccaatcagccaaggattcgtcagccaaggcaccctcagcagcctgttggacagaagcatctcct |
7066860 |
T |
|
| Q |
101 |
aaagcactctgagcatcatcaagtgtgtcttgagagataccagattgttttgcttcatctattagactttgcaatgcatcttgacacaaaactgaatagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7066861 |
aaagcactctgagcatcatcaagtgtgtcttgagagataccagattgttttgctccatctattagactttgcaatgcatcttgacacaaaactgaatagt |
7066960 |
T |
|
| Q |
201 |
atggcaacaccaccaccaatgaatataccaaataaattgatatccttgcaaccatgtttcttctttattcgttataattaatcgaacctgtttggttgaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
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| T |
7066961 |
atggcaacaccaccaccaatgaatataccaaataaattgatatccttgcaaccatgtttcttctttattcgttataattaattgaacctgtgtggttgaa |
7067060 |
T |
|
| Q |
301 |
gaaacacccttaacaaattgtattctaatatgtttgcaacaatatgaagtgaaactttgtctggttgaaattttctgttatatttggctttcatgctcaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7067061 |
gaaacacccttaacaaattgtattctaatatgtttgcaacaatatgaagtgaaactttgtctggttgaaattttctgttatatttggctttcatgctcaa |
7067160 |
T |
|
| Q |
401 |
atttgaagtgaggttcacacaagtgtcaagtatttgactatcaaatccaacaagtttgccaattttggacaattttatgcattttattacccatcgatag |
500 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
7067161 |
atttgaaatgaggttcacacaagtgtcaagtatttgactatcaaatccaacaagtttgccaattttggacaattttatgcattttattacctatcgatag |
7067260 |
T |
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| Q |
501 |
aaatctttattacaatcatattttgcaatcttaagccttcatttacggctttgctaactattttatatagccat |
574 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7067261 |
aaatctttattacaatcatattttgcaatcttaagccttcatttacggctttgctaactattttatatagccat |
7067334 |
T |
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