View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20930_low_3 (Length: 418)
Name: NF20930_low_3
Description: NF20930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20930_low_3 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0002 (Bit Score: 362; Significance: 0; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Original strand, 145847 - 146240
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
145847 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
145946 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
145947 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
146046 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
146047 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
146146 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
146147 |
cattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaaggatatctctctgttgtgcaaaaagttgcagcctttga |
146240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Original strand, 135796 - 136189
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
135796 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
135895 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
135896 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
135995 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
135996 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttccttccaaccataacagattcatttac |
136095 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
136096 |
cattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaaggatatctctctgttgtgcaaaaagttgcagcctttga |
136189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 358; Significance: 0; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Complemental strand, 13171192 - 13170799
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13171192 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
13171093 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13171092 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13170993 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
13170992 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttccttccaaccataacagattcatttac |
13170893 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13170892 |
cattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaaggatatctctctgttgtgcaaaaagttgcagcctttga |
13170799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Complemental strand, 13333065 - 13332672
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13333065 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
13332966 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13332965 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13332866 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13332865 |
ccacaccaacactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
13332766 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13332765 |
cattgaacttgaaggcgttctaagagaaactctcgcgctcacagtttgcaagccaagaatatctctctgttgtgcaaaaagttgcagcctttga |
13332672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Complemental strand, 13344250 - 13343857
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
13344250 |
tcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatggttttagtgactctcagaatatcgaaatcctccgatacacaa |
13344151 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13344150 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13344051 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13344050 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
13343951 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||| | |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
13343950 |
cattgaacttgaaggtgttcttagagaaactctcccgctcacagtttgcaagccaaggatatctctctgttgtgcaaaaatctgcagcctttga |
13343857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Complemental strand, 13289826 - 13289433
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
13289826 |
tcgaagagaatcaagattattgctttcaccacctcttgaagtgacagattcatgaatggttttagttactctcaaaatatcgaaatcctccgatacacaa |
13289727 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13289726 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcga |
13289627 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13289626 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagatttatttac |
13289527 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| |
|
|
| T |
13289526 |
cattgaacttgaaggcgttctaagagaaactctccctctcacagtttgcaagccaaggatatctctctgttgtgcaaaaagctgcagcctttga |
13289433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Complemental strand, 13161141 - 13160748
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
||||||| ||||||||||||| |||| ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13161141 |
tcgaagagaatcaagattattgctttcgccagctcttgaggtgacagattcatgaatggttttagttactctcagaatatcgaaatcctccgatacacaa |
13161042 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13161041 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
13160942 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13160941 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaacgagtctctccttatcatccttcctaccaaccataacagattcatttac |
13160842 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagcctttga |
400 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
13160841 |
cattgaacttgaaggcgttcttagagaaactctcgcgctcacagtttgcaagccaaggatatctctttgttgtgcaaaaagttgcagcctttga |
13160748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 10889467 - 10889082
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| ||| |||||||||||||| | | |||||||||| || |||||| ||| ||||||||||| | | ||||||||||||||| ||||||||| |
|
|
| T |
10889467 |
tcgaagaaaatctagattattgttttcccaagctcttgaagtcacagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaa |
10889368 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||| |||| |||||||| || |||||||||| || |||||| |||| |||||| ||||| || ||||| || ||||| |||||||| |||||||||| |
|
|
| T |
10889367 |
gcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaa |
10889268 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| ||||| ||| | |||| |||||| || || |||| |||||| | || | | ||||||||||||| || ||||||||||| ||||||||||| || |
|
|
| T |
10889267 |
caacaccgatattgttattcctagtgctgctctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagattcattaac |
10889168 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgca |
392 |
Q |
| |
|
| |||||||||||| ||||| |||||| | | || | ||||||||| ||||| |||| | | ||||||||||||||||||| |
|
|
| T |
10889167 |
tactgaacttgaaggggttctacgagaaactttaccaattttagtttgcaaaccaaggatatctttatgttgtgcaaaaagttgca |
10889082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 8861447 - 8861127
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||| | | ||||||||||||| |||||| ||| ||||||||||| | ||||||||||||||| ||||||||| |
|
|
| T |
8861447 |
tcgaagaaaatcaagattattgttttcccaagctcttgaagtgacagattcaagaagagttttagttacagttgaaatatcaaaatcctctgatacacaa |
8861348 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||| |||| |||||||| || |||||||||| || |||||| |||| |||||| ||||| || ||||| || ||||| |||||||| |||||||||| |
|
|
| T |
8861347 |
gcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaa |
8861248 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| ||||| ||| | |||| |||||| || || |||| |||||| | || | | ||||||||||||| || ||||||||||| ||||||||||| || |
|
|
| T |
8861247 |
caacaccgatattgttattcctagtgctgctctctgatagcaacatgttcattactgtctctttatcatcatttctaccaaccatgacagattcattaac |
8861148 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttct |
327 |
Q |
| |
|
| |||||||||||| ||||| |
|
|
| T |
8861147 |
tactgaacttgaaggggttct |
8861127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 322
Target Start/End: Complemental strand, 10127025 - 10126774
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| | |||| ||||||||| | |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10127025 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaaggg |
10126926 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| || ||| | || | ||||| |||||| | || | | ||||||| |
|
|
| T |
10126925 |
tagtttttcccaaacctcccatgcccaaaattgcaacaacacctatattattatgggatgtgtctctctgagatagcaacatgttcattattgtctcttt |
10126826 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggc |
322 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
10126825 |
gtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggc |
10126774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 11159925 - 11160245
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| ||||||||||||| |||| | | ||||||||||||| |||||| ||| ||||||||||| | ||||||||||||||| ||||||||| |
|
|
| T |
11159925 |
tcgaagaaaatcaagattattggtttcccaagctcttgaagtgacagattcaagaagagttttagttacagataaaatatcaaaatcctcagatacacaa |
11160024 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||| |||| | ||||||||| |||||||||| || || ||| |||| |||||| ||||| || ||||| || ||||| |||||||| |||||||||| |
|
|
| T |
11160025 |
gcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaa |
11160124 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| || || ||| | ||||| ||||| ||| || |||| |||||| | || | | ||||||||||||| || ||||||||||| |||||| |||| || |
|
|
| T |
11160125 |
caacgcctatattgttattgccagtgctactctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagatgcattaac |
11160224 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttct |
327 |
Q |
| |
|
| |||||||||||| ||||| |
|
|
| T |
11160225 |
tactgaacttgaaggggttct |
11160245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 71 - 322
Target Start/End: Complemental strand, 10663623 - 10663372
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| | |||| ||||||||| | |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10663623 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaaggg |
10663524 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| ||| ||| | || | |||| |||||| | || | | ||||||| |
|
|
| T |
10663523 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
10663424 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggc |
322 |
Q |
| |
|
||| |||||||||| ||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
10663423 |
gtcacccttcctacccaccatgagagattcatttaccactgaacttgaaggc |
10663372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 393
Target Start/End: Original strand, 11148762 - 11149148
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||| | | | ||||||||||| |||||| | | |||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
11148762 |
tcgaagaaaatcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaa |
11148861 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||| |||| |||||||| || |||||||||| || |||||| ||| || ||| ||||| || ||||| || ||||| |||||||| |||||||||| |
|
|
| T |
11148862 |
gcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaa |
11148961 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| ||||| ||| | ||||| |||||| || | |||| |||||| | | | | ||||||| |||||||| ||||||||||| | |||||||| || |
|
|
| T |
11148962 |
caacaccgatattgttattgctagtgctgctctttgatagcaacatgttcgttattatctctttgtcatcctttctaccaaccatgaatgattcattaac |
11149061 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcag |
393 |
Q |
| |
|
|| ||||| ||||| ||||| | ||||||| |||| ||||||||| ||||| |||| | | | ||||||||||| |||||| |
|
|
| T |
11149062 |
cacagaactagaaggtgttctatggaaaattctagcacttttagtttgcaaaccaaggatatctttgttttgtgcaaaaatttgcag |
11149148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 71 - 327
Target Start/End: Complemental strand, 10088887 - 10088631
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10088887 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
10088788 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| ||| || | | ||| || | || | || | |||||| | || | | ||||||| |
|
|
| T |
10088787 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctcttt |
10088688 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
10088687 |
atcatccttcctacccaccatgacagattcatttaccaccgaacttgaaggagttct |
10088631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 71 - 327
Target Start/End: Complemental strand, 10195770 - 10195514
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10195770 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
10195671 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| ||| || | | ||| || | || | || | |||||| | || | | ||||||| |
|
|
| T |
10195670 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctcttt |
10195571 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
||||||||| ||||| ||||| |||||||||||||||| |||||||||||| ||||| |
|
|
| T |
10195570 |
atcatcctttctacccaccatgacagattcatttaccactgaacttgaaggagttct |
10195514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 11130934 - 11131254
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||||| |||||||||||||||||| | | | ||||||||||| |||||| | | |||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
11130934 |
tcgaagaaaatcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaa |
11131033 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||| |||| |||||||| || |||||||||| || |||||| ||| || ||| ||||| || ||||| || ||||| |||||||| |||||||||| |
|
|
| T |
11131034 |
gcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaa |
11131133 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| ||||| ||| | ||||| |||||| || | |||| |||||| | | | | ||||||| |||||||| ||||||||||| | |||||||| || |
|
|
| T |
11131134 |
caacaccgatattgttattgctagtgctgctctttgatagcaacatgttcgttattgtctctttgtcatcctttctaccaaccatgaatgattcattaac |
11131233 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttct |
327 |
Q |
| |
|
|| ||||| ||||| ||||| |
|
|
| T |
11131234 |
cacagaactagaaggtgttct |
11131254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 322
Target Start/End: Complemental strand, 10032100 - 10031849
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10032100 |
gttactctcataatatcaaaatcctcagacacacaagcccaggccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaaggg |
10032001 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| || | | | || | |||| |||||| | || | | ||||||| |
|
|
| T |
10032000 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggatgcgtctctctgtgatagcaacatgttcattattgtctcttt |
10031901 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggc |
322 |
Q |
| |
|
|||||||||||||| ||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
10031900 |
gtcatccttcctacccaccatgagagattcatttaccactgaacttgaaggc |
10031849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 71 - 352
Target Start/End: Complemental strand, 10527434 - 10527151
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| || ||| |||||||| |||||| |||||||| | || ||||||||||||| || ||| | || |||||| |||| |||||| ||||| | |
|
|
| T |
10527434 |
gttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcattgtaaacaagttgtgcaaggg |
10527335 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggta---gtgccactgtcagatatcaacatactaatgagtctctc |
267 |
Q |
| |
|
| ||||| || ||||| ||||||||||| |||||||| ||||| | | || |||| || ||||||| ||| |||| ||||||| | ||||||| || |
|
|
| T |
10527334 |
ttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattatttctactggtgccacagtctgataccaacatattgatgagtc-atc |
10527236 |
T |
|
| Q |
268 |
tttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtt |
352 |
Q |
| |
|
||||||||| |||||||| || || |||||||||||||||| |||||||||||| ||||| |||||| ||| ||||| |||||| |
|
|
| T |
10527235 |
tttatcatcattcctacccacaatgacagattcatttaccactgaacttgaaggggttctacgagaaaatctatcacttacagtt |
10527151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 327
Target Start/End: Original strand, 10363770 - 10364026
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| | |||| ||||||||| | |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10363770 |
gttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaaggg |
10363869 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| ||| || | | ||| || | || | || | |||||| | || | | ||||||| |
|
|
| T |
10363870 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctcttt |
10363969 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |
|
|
| T |
10363970 |
gtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttct |
10364026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 322
Target Start/End: Complemental strand, 10260795 - 10260544
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||||| |||| | |||| |||||||| | |||||||||||||||||| |||| |||||| ||||| | |
|
|
| T |
10260795 |
gttactctcataatatcaaaatcctcagacacacaagcccacgccttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaaggg |
10260696 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || | ||||| || | || | |||| |||||| | || | | ||||||| |
|
|
| T |
10260695 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattgttggttgtttctctctgtgatagcaacatgttcattattgtctcttt |
10260596 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggc |
322 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
10260595 |
gtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggc |
10260544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 322
Target Start/End: Complemental strand, 10184339 - 10184088
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||||| |||| | ||| ||||||||| | |||||||||||||||||| |||| |||||| ||||| | |
|
|
| T |
10184339 |
gttactctcataatatcaaaatcctcggacacacaagcccacgccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaaggg |
10184240 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| | ||| ||| ||| | || | || | |||||| | || | | ||||||| |
|
|
| T |
10184239 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatagcattatgggttgtgtctctctgtgacagcaacatgttcattattgtctcttt |
10184140 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggc |
322 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
10184139 |
gtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggc |
10184088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 327
Target Start/End: Original strand, 10375786 - 10376073
Alignment:
| Q |
40 |
tcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaact |
139 |
Q |
| |
|
||||||||||||||||||| | | | || |||||||||| ||||||||||||||| || |||||| |||| | |||| ||||||||| | ||||||| |
|
|
| T |
10375786 |
tcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaact |
10375885 |
T |
|
| Q |
140 |
tctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgt |
239 |
Q |
| |
|
| || |||||| |||| |||||| ||||| || ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | ||| | | | |
|
|
| T |
10375886 |
ttttcatcattgtaaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtct |
10375985 |
T |
|
| Q |
240 |
cagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
| |||| |||||| | || | | |||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |
|
|
| T |
10375986 |
ctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttct |
10376073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 398
Target Start/End: Complemental strand, 11769395 - 11769004
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||| ||||||||||||||| | || | | ||||||||||||||||||| | | | | |||||||||| ||||||||||||||| || || ||| |
|
|
| T |
11769395 |
tcgaaggatatcaagattattgctatcccaagttcttgaagtgaccgattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaa |
11769296 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
|||| | |||| |||||||| | |||||||||||||||||| || | |||||| ||||| || ||||| || | ||| ||||| ||||||||||||| |
|
|
| T |
11769295 |
gcccatgccttcaaatcaaaatattgttgaacttctttatcattgtagacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
11769196 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| ||||| ||| || ||| | | ||| | || | |||| |||||| | || | | ||||||| |||| ||||||||| || || |||||||||||||| |
|
|
| T |
11769195 |
caacacctatattattatggattgtgtctctctgtgatagcaacatgttcattattgtctctttgtcattcttcctacccactatgacagattcatttac |
11769096 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagccttt |
398 |
Q |
| |
|
|| |||||||||||| ||||| |||||| ||| |||| ||||||||| || | |||| | | | |||||||||||||||||| |||| |
|
|
| T |
11769095 |
cactgaacttgaaggtgttctacgagaaactctagcacttttagtttgcaaacctaatatatctttattttgtgcaaaaagttgcaggcttt |
11769004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 71 - 368
Target Start/End: Complemental strand, 9838958 - 9838661
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||||| |||| | ||| ||||||||| | ||||||||||| |||||| |||| |||||||||||| | |
|
|
| T |
9838958 |
gttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaaggg |
9838859 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| | ||| ||| ||| | || | ||||| |||||| | || | | ||||||| |
|
|
| T |
9838858 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctcttt |
9838759 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatat |
368 |
Q |
| |
|
||| |||||||||| |||| ||||||||||||||| |||||| ||||| ||||| |||||| ||| |||| ||||||||| ||||| |||| |
|
|
| T |
9838758 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatat |
9838661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 71 - 368
Target Start/End: Complemental strand, 9849836 - 9849539
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||||| |||| | ||| ||||||||| | ||||||||||| |||||| |||| |||||||||||| | |
|
|
| T |
9849836 |
gttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaaggg |
9849737 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| | ||| ||| ||| | || | ||||| |||||| | || | | ||||||| |
|
|
| T |
9849736 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctcttt |
9849637 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatat |
368 |
Q |
| |
|
||| |||||||||| |||| ||||||||||||||| |||||| ||||| ||||| |||||| ||| |||| ||||||||| ||||| |||| |
|
|
| T |
9849636 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatat |
9849539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 363
Target Start/End: Complemental strand, 10580698 - 10580406
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| | |||| |||||||| | |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10580698 |
gttactctcataatatcaaaatcctcagacacacaaacccacgccttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaaggg |
10580599 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | | ||| || | |||| |||||| | || | | ||||||| |
|
|
| T |
10580598 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatggattgtgtttctctgtgatagcaacatgttcattattgtctcttt |
10580499 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaag |
363 |
Q |
| |
|
|||||||||||||| ||||| |||||||| || | || ||||||||||| |||| |||||| ||| ||||| ||||||||| ||||| |
|
|
| T |
10580498 |
gtcatccttcctacccaccatgacagattcgttaaacacagaacttgaaggagttccatgagaaactctagcactcttagtttgcaaaccaag |
10580406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 71 - 321
Target Start/End: Original strand, 10434016 - 10434266
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||| ||| |||||||||||||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10434016 |
gttactttcaaaatatcaaaatcctgagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
10434115 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
270 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| || || ||| || ||| || | |||| |||||| | || | | ||||||| |
|
|
| T |
10434116 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtttctctgtgatagcaacatgttcattattgtctcttt |
10434215 |
T |
|
| Q |
271 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaagg |
321 |
Q |
| |
|
||||||||||| |||||||| | ||||||||| |||| ||||||||||| |
|
|
| T |
10434216 |
gtcatccttccttccaaccatgaaagattcattgaccacagaacttgaagg |
10434266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 352
Target Start/End: Complemental strand, 10500653 - 10500369
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||| ||||| || ||| |||||||||| |||||||| ||| | |||||||||||||| |||| || || | || || |||| |||||| ||||| | |
|
|
| T |
10500653 |
gttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgttgtaaacaagttgagcaagtg |
10500554 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggta---gtgccactgtcagatatcaacatactaatgagtctctc |
267 |
Q |
| |
|
| ||||| || || || |||||||||||||||||||| ||||| | | || |||| | || ||| | || |||| ||||||| | | |||||| || |
|
|
| T |
10500553 |
ttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattatttctgcctgttccaatatctgataccaacatattgacgagtctatc |
10500454 |
T |
|
| Q |
268 |
tttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtt |
352 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||||||||||| |||||||||||| ||||| |||||| ||| |||| |||||| |
|
|
| T |
10500453 |
tttatcatcattcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttacagtt |
10500369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 11781993 - 11782234
Alignment:
| Q |
89 |
aaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgc |
188 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| | || ||||| |||||| |||| ||| || ||||| || ||||| || || || | |
|
|
| T |
11781993 |
aaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctc |
11782092 |
T |
|
| Q |
189 |
ccatacccaaaattgcaaccacaccaatactactat---tggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctacc |
285 |
Q |
| |
|
|||||||||||||||| || ||||| | | || ||| || | |||| | ||| ||||||| |||| | |||||||| ||||||||||| |||||||| |
|
|
| T |
11782093 |
ccatacccaaaattgcgacaacacctaaattattatttctgctggtgctgcggtctgatatcagcatattgatgagtctatctttatcatcattcctacc |
11782192 |
T |
|
| Q |
286 |
aaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
|||| |||||| ||||| || |||||||||||| ||||| |
|
|
| T |
11782193 |
caccacgtcagattgatttagcactgaacttgaaggggttct |
11782234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 10077366 - 10077224
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||||| |||| | | || ||||||||||| | |||||| | |||||| |||| |||||||||||| | |
|
|
| T |
10077366 |
gttactctcataatatcaaaatcctcagacacacaagcccatgcctgcaaatcaaaatggtatcgaactttataatcattgtaaacaagttgggcaaggg |
10077267 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
213 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
10077266 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
10077224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 319
Target Start/End: Complemental strand, 10517547 - 10517310
Alignment:
| Q |
85 |
atcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaaca |
184 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| || || ||||| || ||||| || || |
|
|
| T |
10517547 |
atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaaactgtgcaagggtcgttttaccgacg |
10517448 |
T |
|
| Q |
185 |
ccgcccatacccaaaattgcaaccacaccaatactactat---tggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcc |
281 |
Q |
| |
|
|| |||||||||| ||||||| | ||||| | | || ||| || | |||||| || |||| ||||||| | |||||||| ||||||||||| |||| |
|
|
| T |
10517447 |
cctcccatacccacaattgcagcaacacctaaattattatttctgcttgtgccaacatctgataccaacatattgatgagtctatctttatcatcattcc |
10517348 |
T |
|
| Q |
282 |
taccaaccataacagattcatttaccattgaacttgaa |
319 |
Q |
| |
|
|||| |||| |||||||||||| || ||||||||| |
|
|
| T |
10517347 |
tacccaccacgtcagattcatttagcaccgaacttgaa |
10517310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 10077155 - 10077100
Alignment:
| Q |
282 |
taccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaatt |
337 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||| ||||| |||||||| |
|
|
| T |
10077155 |
taccaaccatctcagattcatttaccactgaacttgaaggtgttctacgagaaatt |
10077100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 7 - 398
Target Start/End: Complemental strand, 26907058 - 26906667
Alignment:
| Q |
7 |
tcgaagaatatcaagattattgttttcaccacctcttgaagtgaccgattcatgaatggttttagttactctcagaatatcaaaatcctccgatacacaa |
106 |
Q |
| |
|
|||||| | ||||||||||||| | || | | ||| ||||||||||||||| | | | ||| |||||||||| ||||||||||||||| || |||||| |
|
|
| T |
26907058 |
tcgaaggacatcaagattattggtatcccaagttctggaagtgaccgattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaa |
26906959 |
T |
|
| Q |
107 |
acccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaattgcaa |
206 |
Q |
| |
|
||||| | |||| ||||||||| |||||||||||||||||| ||||||||||||||||| || ||||| || | ||| ||||| ||||||||||||| |
|
|
| T |
26906958 |
acccatgccttcaaatcaaaatgccgttgaacttctttatcattgtaaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaa |
26906859 |
T |
|
| Q |
207 |
ccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
| ||||| ||| || ||| ||| ||| | || || |||| ||||||| | || | | ||||||| |||||||||||||| ||||| |||||||||||||| |
|
|
| T |
26906858 |
caacacctatattattatgggttgtgtctctctctgatagcaacatattcattattgtctctttgtcatccttcctacccaccatgacagattcatttac |
26906759 |
T |
|
| Q |
307 |
cattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagccttt |
398 |
Q |
| |
|
|| |||||||||||| ||||| |||||| ||| |||| ||||||||| ||||| |||| | | ||||||||||| | |||||| |||| |
|
|
| T |
26906758 |
cactgaacttgaaggtgttctacgagaaactctagcacttttagtttgcaaaccaaggatatctttatgttgtgcaaacaattgcaggcttt |
26906667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 398
Target Start/End: Original strand, 31679737 - 31680032
Alignment:
| Q |
103 |
acaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgcccatacccaaaatt |
202 |
Q |
| |
|
||||||||| |||| | ||||||| | |||||||| ||||||||||| ||||||||||| || || | ||||| || ||||| ||||| || |||||| |
|
|
| T |
31679737 |
acaaacccaagcttttacatcaaaacgttcttgaacatctttatcattgtaaagaagttgagctagggctgttttaccgacacctcccatgccgaaaatt |
31679836 |
T |
|
| Q |
203 |
gcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcat |
302 |
Q |
| |
|
| ||| ||| |||| || |||| ||||| | || |||| ||||||| || | ||| ||||||||||| ||||||||||||||| | ||||| || |
|
|
| T |
31679837 |
gaaacaacattaatattatcattgacagtgctaacatctgatagcaacatattagttagtttctctttatcactcttcctaccaaccatgaaagattgat |
31679936 |
T |
|
| Q |
303 |
ttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtttgcaagccaagcatatatctctgttgtgcaaaaagttgcagccttt |
398 |
Q |
| |
|
||| | |||||||||||| ||||| ||| ||| || |||| ||||||||||| ||||| |||| | | ||||||||||||||||| ||||||| |
|
|
| T |
31679937 |
ctactagtgaacttgaaggtgttctaagaaaaaccctaccacttacagtttgcaacccaaggatatctttttgttgtgcaaaaagttggagccttt |
31680032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 11485096 - 11484855
Alignment:
| Q |
89 |
aaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgc |
188 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||| | || ||||| || ||| || |||| |||||| ||||| || ||||| || || || | |
|
|
| T |
11485096 |
aaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgttgtaaacaagttgtgcaagggtcgttttaccgacgcctc |
11484997 |
T |
|
| Q |
189 |
ccatacccaaaattgcaaccacaccaatactactat---tggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcctacc |
285 |
Q |
| |
|
||||| ||||||||||||| ||||| | | || ||| || | || |||| ||| |||| ||||| | || |||||| |||||||| || ||||| || |
|
|
| T |
11484996 |
ccataaccaaaattgcaacaacacctaaattattatatctgctggtaccacagtctgataccaacacatcaaggagtctatctttatcttcattccttcc |
11484897 |
T |
|
| Q |
286 |
aaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
||||||||||||||||| |||| ||||||||| || ||||| |
|
|
| T |
11484896 |
caccataacagattcattcaccactgaacttgatggtgttct |
11484855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 44957867 - 44958003
Alignment:
| Q |
257 |
atgagtctctctttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaattctctcactcacagtttgca |
356 |
Q |
| |
|
|||||||| |||||||||| ||||| || ||||||| ||||||||| ||| |||||||||||| ||||| |||||| ||| |||| ||||| || |
|
|
| T |
44957867 |
atgagtctatctttatcatgtttcctgcccaccataatagattcattaacccctgaacttgaaggtgttctatgagaaactctagcacttttagtttcca |
44957966 |
T |
|
| Q |
357 |
agccaagcatatatctctgttgtgcaaaaagttgcag |
393 |
Q |
| |
|
| |||| |||| | | || ||||||||||||||||| |
|
|
| T |
44957967 |
aaccaattatatctttatgctgtgcaaaaagttgcag |
44958003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 327
Target Start/End: Original strand, 17852916 - 17853175
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
170 |
Q |
| |
|
|||||||||| || ||||||||| || ||||||||||||||| |||| ||||||||||| | || ||| | || |||||| |||| ||| || ||||| | |
|
|
| T |
17852916 |
gttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcattgtaaacaagctgtgcaaggg |
17853015 |
T |
|
| Q |
171 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactat---tggtagtgccactgtcagatatcaacatactaatgagtctctc |
267 |
Q |
| |
|
| ||||| || ||||| ||||| ||||| |||||||| ||||| | | | ||| || | ||||| |||| |||| || |||||| | ||||| | |
|
|
| T |
17853016 |
tcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttatttatgctggtgcctatgtctgataccagcatactgacaagtctatt |
17853115 |
T |
|
| Q |
268 |
tttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
||||||||| ||||| || ||||| |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
17853116 |
tttatcatcattccttcctaccatgacagattcatttaccacggaacttgaaggggttct |
17853175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 49981 - 50036
Alignment:
| Q |
272 |
tcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttct |
327 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |
|
|
| T |
49981 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttct |
50036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 825994 - 825890
Alignment:
| Q |
82 |
aatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgcca |
181 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||| ||||||||| || | ||||| |||||||| |||| |||| | ||||| || | ||| ||| |
|
|
| T |
825994 |
aatatcaaaatcctcggtgacacaaacccagactttcaaatcaaaatgctcatcaactttcttatcattgtaaacaagtcgagcaagtgtcgatttacca |
825895 |
T |
|
| Q |
182 |
acacc |
186 |
Q |
| |
|
||||| |
|
|
| T |
825894 |
acacc |
825890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 29836575 - 29836511
Alignment:
| Q |
242 |
gatatcaacatactaatgagtctctctttatcatccttcctaccaaccataacagattcatttac |
306 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
29836575 |
gatatcaacatattaactagttcctctttatcatccttcctaccaaccgtgacatattcatttac |
29836511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 29836740 - 29836668
Alignment:
| Q |
71 |
gttactctcagaatatcaaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctt |
143 |
Q |
| |
|
|||||||||| ||||||||||| || || |||||||||||||||| | ||||||||| | || |||||||| |
|
|
| T |
29836740 |
gttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacatcaaaatgatttttaacttctt |
29836668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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