View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20934_high_13 (Length: 247)
Name: NF20934_high_13
Description: NF20934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20934_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 9476647 - 9476415
Alignment:
| Q |
1 |
ctaccactgaaatagtccttctaaaaagaccttgtcttgttctttgcatcaaaatctatctatcaattaaagaaacaatgagcattgaatttcgtttcct |
100 |
Q |
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| T |
9476647 |
ctaccactgaaatagtccttctaaaaagaccttgtcttgttctttgcatcaaaatctatctatcaattaaagaaacaatgagcattgaatttcgtttcct |
9476548 |
T |
|
| Q |
101 |
cgttttctagtgaaagctatatgaagttgtgaaaattgtaacttcatcacaaaggcaatttcgtaagactatgaacattaagaggacaaataaatcaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9476547 |
cgttttctagtgaaagctatatgaagttgtgaaaattgtaacttcatcacaaaggcaatttcgtaagactatgaacattaagaggacaaataaatcaaac |
9476448 |
T |
|
| Q |
201 |
cctacacgacaaaagctgccatatattgagcat |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
9476447 |
cctacacgacaaaagctgccatatattgagcat |
9476415 |
T |
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