View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20934_high_6 (Length: 360)
Name: NF20934_high_6
Description: NF20934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20934_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 38931631 - 38931306
Alignment:
| Q |
10 |
gtgaaggagaagaagaggaagtggtagaagagagagaaacaaaaactaaagagcattgtcaccatggtgaaaaagaaagaagccatggtgagagaacaag |
109 |
Q |
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| T |
38931631 |
gtgaaggagaagaagaggaagtggtagaagagagagaaacaaaaactaaagagcattgtcaccatggtgaaaaagaaagaagccatggtgagagaacaag |
38931532 |
T |
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| Q |
110 |
aaccagagaacatgaagaacaacacaacttcttcgatgaaaccgtttgcacattgaagcttcatgagaacatagctgatccttcacgtgccgatgtgttt |
209 |
Q |
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| T |
38931531 |
aaccagagaacatgaaggacaacacaacttcttcgatgaaactgtttgcacattgaagcttcatgagaacatagctgatccttcacgtgccgatgtgttt |
38931432 |
T |
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| Q |
210 |
aacccaagagcaggtcgtataacgaatgtcaatagtttgactctcccagttctcaaattgcttcatcttagtgcccaatgggtttacctctacaaggtaa |
309 |
Q |
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| T |
38931431 |
aacccaagagcaggtcgtataacgaatgtcaatagtttgactctcccagttctcaaattgcttcatcttagtgcccaatgggtttacctctacaaggtaa |
38931332 |
T |
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| Q |
310 |
ctaaataagtgcatcattctgcaatt |
335 |
Q |
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| T |
38931331 |
ttaaataagtgcatcattctgcaatt |
38931306 |
T |
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