View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20935_high_14 (Length: 237)

Name: NF20935_high_14
Description: NF20935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20935_high_14
NF20935_high_14
[»] chr3 (9 HSPs)
chr3 (17-237)||(2833219-2833444)
chr3 (67-188)||(4778032-4778153)
chr3 (65-186)||(41640822-41640943)
chr3 (65-186)||(1045348-1045468)
chr3 (70-170)||(34213151-34213251)
chr3 (67-170)||(26982022-26982125)
chr3 (117-184)||(24748338-24748405)
chr3 (76-114)||(1762039-1762077)
chr3 (142-186)||(36597090-36597134)
[»] chr2 (4 HSPs)
chr2 (65-186)||(10994430-10994551)
chr2 (68-194)||(43411515-43411641)
chr2 (66-158)||(29682700-29682792)
chr2 (67-161)||(41074563-41074656)
[»] chr1 (10 HSPs)
chr1 (65-186)||(51871201-51871322)
chr1 (71-162)||(25410572-25410663)
chr1 (65-186)||(15274345-15274466)
chr1 (67-170)||(52372670-52372773)
chr1 (68-158)||(13297595-13297685)
chr1 (67-164)||(44503952-44504049)
chr1 (68-162)||(3227649-3227743)
chr1 (67-186)||(40799651-40799770)
chr1 (67-153)||(21926619-21926704)
chr1 (68-134)||(9644372-9644438)
[»] chr7 (8 HSPs)
chr7 (65-186)||(33743470-33743591)
chr7 (63-170)||(33888612-33888719)
chr7 (68-157)||(12258376-12258465)
chr7 (67-170)||(46028431-46028534)
chr7 (67-170)||(23176893-23176996)
chr7 (67-128)||(26557857-26557918)
chr7 (82-162)||(40188186-40188266)
chr7 (130-186)||(26556449-26556505)
[»] chr8 (10 HSPs)
chr8 (67-170)||(42032733-42032836)
chr8 (65-186)||(2074778-2074899)
chr8 (67-183)||(41927020-41927136)
chr8 (65-139)||(36650452-36650526)
chr8 (76-164)||(32073929-32074017)
chr8 (67-169)||(24604837-24604939)
chr8 (82-170)||(34152010-34152098)
chr8 (68-164)||(42241226-42241322)
chr8 (65-155)||(26000097-26000187)
chr8 (89-158)||(8172247-8172316)
[»] chr6 (3 HSPs)
chr6 (65-169)||(9755657-9755761)
chr6 (82-155)||(52009-52082)
chr6 (86-164)||(9557366-9557444)
[»] chr4 (9 HSPs)
chr4 (65-149)||(48309635-48309719)
chr4 (67-191)||(23012311-23012435)
chr4 (82-170)||(50655066-50655154)
chr4 (67-164)||(24065097-24065194)
chr4 (67-164)||(30251395-30251492)
chr4 (82-186)||(45068100-45068204)
chr4 (82-164)||(4866794-4866876)
chr4 (76-164)||(44616658-44616746)
chr4 (86-170)||(19469667-19469750)
[»] chr5 (6 HSPs)
chr5 (67-186)||(41650525-41650643)
chr5 (67-186)||(27639424-27639543)
chr5 (71-164)||(33861926-33862018)
chr5 (68-184)||(3465280-3465396)
chr5 (63-104)||(33672060-33672101)
chr5 (108-163)||(33672896-33672946)
[»] scaffold0329 (1 HSPs)
scaffold0329 (67-170)||(18417-18520)
[»] scaffold0042 (1 HSPs)
scaffold0042 (68-128)||(83251-83311)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 2833444 - 2833219
Alignment:
Q  17 aaaatgcgagaagaaaataaagttcttcatctttttgtgaggcaatgtcagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  2833444 aaaatgcgagaagaaaataaagttcttcatctttttgtgaggcaatgtcagtggtagatagagtgaaactcttagcttggaagtggttcatggctaagtg 2833345  T
Q  117 ccctg----ctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttgaaatcagtagggtttttgcggtggg-nnnnnnncttctgggg 211  Q
    |||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||    
T  2833344 ccctgctagctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttggaatcagtagggtttttgcggtgggttttttttcttctgggg 2833245  T
Q  212 ttgcttgtggggtttggtggggttgt 237  Q
    |||||||||||||| |||| ||||||    
T  2833244 ttgcttgtggggttcggtgcggttgt 2833219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 4778032 - 4778153
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| ||||| |||||||||| |||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  4778032 gtggtggatagagttaaactcttagtttggaagtggttccaggctaggtgccctgctagtccctgctctctctatgagtgggaggtgcagcccgtcctgt 4778131  T
Q  167 gttgaaatcagtagggtttttg 188  Q
    |||  |||| ||||||||||||    
T  4778132 gtttgaatcggtagggtttttg 4778153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 41640822 - 41640943
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||||||| ||||||||| |||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41640822 cagtggtggacagagttaaactcttaacttggaagtggtttcgggctaagtgccctgctagttcctgctctccctatgagtgggaggtgcagcccgtcct 41640921  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||   | ||||||||||||    
T  41640922 gtgtttggaccagtagggtttt 41640943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 1045468 - 1045348
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||| || || ||||||| |||||||||||||||| |||||||||||||||||||||| || |||||||||||| |||||||||||| ||||||    
T  1045468 cagtggtggatagggttaaactctcagcttggaagtggttcctggctaagtgccctgctagttcttgttctctctatgag-gggaggtgcagctcgtcct 1045370  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||  |||| ||||||||||    
T  1045369 gtgtttgaatcggtagggtttt 1045348  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 34213151 - 34213251
Alignment:
Q  70 gtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgtt 169  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||    | ||||| ||||||||||||||||| ||||    
T  34213151 gtggatagagtgaaactcttagcttggaagtggttcatggctaagtgccatgctagttcatgcacttatcacgagtgtgaggtgcagcccgtcctgtgtt 34213250  T
Q  170 g 170  Q
    |    
T  34213251 g 34213251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 26982125 - 26982022
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgc-tctctctatgagtgggaggtgcagcccgtccta 165  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||  || || ||||||||||||| |||||||| |||    
T  26982125 gtggtggatagagtaaaactcttagcttggaagtggttcttggctaagtgccctgcaagttcctgcacctatc-atgagtgggaggttcagcccgttcta 26982027  T
Q  166 tgttg 170  Q
     ||||    
T  26982026 cgttg 26982022  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 24748405 - 24748338
Alignment:
Q  117 ccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttgaaatcagtagggtt 184  Q
    |||||||||||| || ||||||| |||||||||||||||| ||||||  ||||| ||||| |||||||    
T  24748405 ccctgctagttcatgttctctctttgagtgggaggtgcagtccgtccagtgttggaatcaatagggtt 24748338  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 1762077 - 1762039
Alignment:
Q  76 agagtgaaactcttagcttggaagtggttcatggctaag 114  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1762077 agagcgaaactcttagcttggaagtggttcatggctaag 1762039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 36597090 - 36597134
Alignment:
Q  142 gagtgggaggtgcagcccgtcctatgttgaaatcagtagggtttt 186  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  36597090 gagtgagaggtgcagcccgtcctgtgttggaatcagtagggtttt 36597134  T

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Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 10994430 - 10994551
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |    
T  10994430 cagtggtggatagagttaaactcttagcttggaagtggttcctggctaagtgccctgctagttcccgttctctctatgagtgggaggtgcagcccgtctt 10994529  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||  |||| ||||||||||    
T  10994530 gtgtttgaatcggtagggtttt 10994551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 43411515 - 43411641
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatg 167  Q
    ||||||| |||| ||||||||||||||| ||||| ||| |||||||||| |||||||| |||||| ||    ||||||||||||||||||||||||| ||    
T  43411515 tggtggatagagcgaaactcttagcttgaaagtgtttcctggctaagtgtcctgctagctcctgcacttatcatgagtgggaggtgcagcccgtcctttg 43411614  T
Q  168 ttgaaatcagtagggtttttgcggtgg 194  Q
    |||| |   |||||||||||| |||||    
T  43411615 ttgacagtggtagggtttttgtggtgg 43411641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 29682700 - 29682792
Alignment:
Q  66 agtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcc 158  Q
    ||||||||| ||||| ||||||||||||| ||||||||||  |||||||  |||||||| | |||| ||||||| ||||||||||||||||||    
T  29682700 agtggtggatagagttaaactcttagcttagaagtggttccaggctaagcaccctgctaatccctgttctctctttgagtgggaggtgcagcc 29682792  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 41074656 - 41074563
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgt 161  Q
    |||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||| |||| | || |  |||||||| |||||||||||||    
T  41074656 gtggtggacaaagcgaaactcttagcttgaaagtggttcctggctaagtgccctgctag-tccttcacttttcatgagtggaaggtgcagcccgt 41074563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 7e-39; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 51871201 - 51871322
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||| ||| | |||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51871201 cagtggtggatagaattaaactcttagcttggaagtggttcctgactaagtgccctgctagttcctgttctctctatgagtgggaggtgcagcccgtcct 51871300  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||  |||| ||||||||||    
T  51871301 gtgtttgaatcggtagggtttt 51871322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 25410663 - 25410572
Alignment:
Q  71 tggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtc 162  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  25410663 tggatagagtgaaactcttagcttggaagtggttcctggctaagtaccttgctagttcctgctctttctatgagtgggaggtgcagcccgtc 25410572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 15274345 - 15274466
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||||||||||||| |||||||| ||||| ||| | |||||||| ||||||||||| || |||||||||||||||||||||||| | |||||    
T  15274345 cagtggtggacagagtgaaacttttagcttgtaagtgattcctagctaagtgtcctgctagttcatgttctctctatgagtgggaggtgcagtctgtcct 15274444  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||| |||| ||||||||||    
T  15274445 gtgttggaatcggtagggtttt 15274466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 52372670 - 52372773
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||| ||| |||| |    
T  52372670 gtggtggatagagcgaaactcttagcttagaagtggttcctggctaggtgccctgctagttcctgctctttttatgagtgggaggtgcaacccatccttt 52372769  T
Q  167 gttg 170  Q
    ||||    
T  52372770 gttg 52372773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 13297595 - 13297685
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcc 158  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||    |||||||||||||||||||    
T  13297595 tggtggatagagtgaaactcttagcttgaaattggttcatggctaagtgtcctgctagttcctgcacttatcatgagtgggaggtgcagcc 13297685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 44504049 - 44503952
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||| | |||||| |||||||||||||||||||||||| ||||||| | || ||||||||||||| |  |||||||||||||||||| ||||||    
T  44504049 gtggtggataaagtgaagctcttagcttggaagtggttcatgactaagtgtcgtggtagttcctgctcttttcatgagtgggaggtgcagctcgtcct 44503952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 3227743 - 3227649
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtc 162  Q
    ||||||||| ||| |||||||||||||| ||||| ||| ||| ||||||||||||||||  ||| ||||||||||||||||| ||||| ||||||    
T  3227743 tggtggacatagttaaactcttagcttgaaagtgattcctggttaagtgccctgctagtctctgttctctctatgagtgggaagtgcaacccgtc 3227649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 40799651 - 40799770
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||||||||||||| ||||| |||| |||| | |||||||||  ||||||||| |||||| |  |||||||||||||||||| |||||| |    
T  40799651 gtggtggatagagtgaaactcttggcttgaaagttgttcctagctaagtgcattgctagttcttgctcttttcatgagtgggaggtgcagctcgtccttt 40799750  T
Q  167 gttgaaatcagtagggtttt 186  Q
    | ||  ||| ||||||||||    
T  40799751 gctggcatcggtagggtttt 40799770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 21926619 - 21926704
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtg 153  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |||    ||||||||||||||    
T  21926619 gtggtggatagagtgaaactcttagcctggaagtggttc-tggctaagtgccctgctagttcatgttcttatcatgagtgggaggtg 21926704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 9644372 - 9644438
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctc 134  Q
    ||||||| |||| ||||||||| | ||||||||||||| | |||||||| ||| ||||||| |||||    
T  9644372 tggtggatagagcgaaactcttgggttggaagtggttcctagctaagtgtcctactagttcttgctc 9644438  T

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Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 33743470 - 33743591
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  33743470 cagtggtggacagagttaaaatcttagcttgaaagtggttcttggctaagtgccctgctagtccctgttctctctatgagtgggaggtgcaacccgtcct 33743569  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||  | || ||||||||||    
T  33743570 gtgtttgagtcggtagggtttt 33743591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 33888612 - 33888719
Alignment:
Q  63 gtcagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtc 162  Q
    |||||||||||| |||||| ||||||||| ||||||||||||   ||||||||||||||||||||| |  ||||||||||||||| ||||||| ||||||    
T  33888612 gtcagtggtggatagagtggaactcttagattggaagtggtttcgggctaagtgccctgctagttcatattctctctatgagtggaaggtgcaacccgtc 33888711  T
Q  163 ctatgttg 170  Q
    ||||||||    
T  33888712 ctatgttg 33888719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 12258376 - 12258465
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagc 157  Q
    ||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  12258376 tggtggatagagttaaactcttagcttgaaagtggttcctggctaagtgtcctgccagtccctgctctctctatgagtgggaggtgcagc 12258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 46028534 - 46028431
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||||||| || |||  | ||| ||||||||||||||||||| || |    
T  46028534 gtggtggatagagcgaaactcttagcttggaagtggttcctggctaagtgtcctgctagtttctactccttttataagtgggaggtgcagcccgttcttt 46028435  T
Q  167 gttg 170  Q
    ||||    
T  46028434 gttg 46028431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 23176996 - 23176893
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||| | |||||||||||||||||||||||| ||||| | || ||||| | ||||||||| ||| ||    |||||| ||||||||||||||||||||    
T  23176996 gtggtgtatagagtgaaactcttagcttggaagcggttccttgccaagtgtcatgctagttcatgcacttatcatgagttggaggtgcagcccgtcctat 23176897  T
Q  167 gttg 170  Q
    ||||    
T  23176896 gttg 23176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 26557918 - 26557857
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttc 128  Q
    |||||||||||||| ||||| ||||||||| ||||| || ||||||||||||||||||||||    
T  26557918 gtggtggacagagttaaacttttagcttggtagtggctcctggctaagtgccctgctagttc 26557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 40188266 - 40188186
Alignment:
Q  82 aaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtc 162  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||| ||| ||    |||||| ||||||||||| ||||    
T  40188266 aaactcatagcttggaagtggttcttgcctaagtgccctgctagttcttgcacttatcatgagtaggaggtgcagctcgtc 40188186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 26556505 - 26556449
Alignment:
Q  130 tgctctctctatgagtgggaggtgcagcccgtcctatgttgaaatcagtagggtttt 186  Q
    ||||| |||||||||||||||||||||||| |||| || |  |||||||||||||||    
T  26556505 tgctccctctatgagtgggaggtgcagcccatcctgtgcttgaatcagtagggtttt 26556449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 42032733 - 42032836
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||| | |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||  | ||||||||||||||||| |||||||| |    
T  42032733 gtggtgaatagagcgaaactcttagcttggaagtggttcctggctaagtgccctgctacttcctgctccttttatgagtgggaggtgcaacccgtccttt 42032832  T
Q  167 gttg 170  Q
    ||||    
T  42032833 gttg 42032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 2074899 - 2074778
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||| | ||| |||||||||| || ||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  2074899 cagtggtggatatagttaaactcttagttttgaagttgttccaggctaagtgccctgctagttcctgttctctctatgagtgggaggtgcaacccgtcct 2074800  T
Q  165 atgttgaaatcagtagggtttt 186  Q
     ||||   ||| ||||||||||    
T  2074799 gtgtttgtatcggtagggtttt 2074778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 183
Target Start/End: Original strand, 41927020 - 41927136
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||| ||| ||||||||||||||||||||| |||||||||||| ||| | |||||||| | |||||||||||||| |||| ||| |||| |    
T  41927020 gtggtggatagagcgaatctcttagcttggaagtggttcctggctaagtgccgtgcaaattcctgctttttctatgagtgggagatgcaccccttcctgt 41927119  T
Q  167 gttgaaatcagtagggt 183  Q
    ||||  | |||||||||    
T  41927120 gttggcagcagtagggt 41927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 36650526 - 36650452
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctct 139  Q
    |||||||||||||||| ||||||||||||||| ||||||||  ||||||||| | ||||||||||||||||||||    
T  36650526 cagtggtggacagagttaaactcttagcttgggagtggttccgggctaagtgtcttgctagttcctgctctctct 36650452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 32074017 - 32073929
Alignment:
Q  76 agagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||||||| ||||||||| ||  |||||||||| ||| |||||||||||||  | ||||||||||||| ||||||||||||    
T  32074017 agagtgaaactcttagtttggaagtgatttctggctaagtgtcctactagttcctgctccttttatgagtgggaggcgcagcccgtcct 32073929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 24604837 - 24604939
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||| ||||||||||| ||| ||||||||| |||||||||| ||||||||||  | ||||    |||||||||||||||||||| ||||||    
T  24604837 gtggtggatagagcgaaactcttagattgaaagtggttcttggctaagtggcctgctagttttttctcttatcatgagtgggaggtgcagcccatcctat 24604936  T
Q  167 gtt 169  Q
    |||    
T  24604937 gtt 24604939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 34152098 - 34152010
Alignment:
Q  82 aaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttg 170  Q
    |||||||||||||||||||||||| |||||||| |||||   ||||||||| || |  |||||||||||||||| ||| |||| |||||    
T  34152098 aaactcttagcttggaagtggttcctggctaagcgccctagcagttcctgcacttttcatgagtgggaggtgcaacccatcctttgttg 34152010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 42241322 - 42241226
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    ||||||| | || ||||||||||||||||||||||||| |||| ||| || || ||||||||||| ||  |  ||||||||||||||| ||||||||    
T  42241322 tggtggataaagcgaaactcttagcttggaagtggttcctggcgaagcgctctactagttcctgcacttaccttgagtgggaggtgcaacccgtcct 42241226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 26000097 - 26000187
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgca 155  Q
    ||||||||||  |||| ||||| |||||||| |||||||||  | |||||| || || ||||  ||| |||||||||||||||||||||||    
T  26000097 cagtggtggatggagttaaacttttagcttgaaagtggttctagactaagttccatgttagtctctgttctctctatgagtgggaggtgca 26000187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 8172316 - 8172247
Alignment:
Q  89 tagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcc 158  Q
    |||||||||| |||||| |||| ||||| | |||||| || |||||  ||||||||||||| ||||||||    
T  8172316 tagcttggaaatggttcgtggcgaagtgtcatgctagctcttgctccttctatgagtgggaagtgcagcc 8172247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 9755761 - 9755657
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||| |||||||||||||| ||||||||||||   ||||||||||||||||||||| || |||||| |||| || |||||||||||||||||    
T  9755761 cagtggtggacaaagtgaaactcttagtttggaagtggtttcgggctaagtgccctgctagttcatgttctctccatgaatgagaggtgcagcccgtcct 9755662  T
Q  165 atgtt 169  Q
     ||||    
T  9755661 gtgtt 9755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 52009 - 52082
Alignment:
Q  82 aaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgca 155  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||| ||| || | |||||||||||||||||    
T  52009 aaactcttagcttggaagtggttcctggctaagtgtcttgctagttcttgcactttatatgagtgggaggtgca 52082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 9557444 - 9557366
Alignment:
Q  86 tcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||||||| ||| || ||||||| |||||||| |||||| ||    |||||||||||||||||||||||||    
T  9557444 tcttagcttggaagtgattcctgactaagtgtcctgctagctcctgcacttatcatgagtgggaggtgcagcccgtcct 9557366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 48309719 - 48309635
Alignment:
Q  65 cagtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtggga 149  Q
    |||||||||| ||||||||||||||||||||||||| ||||  ||||||||  |||||||||||||| |||||||||||||||||    
T  48309719 cagtggtggatagagtgaaactcttagcttggaagtcgttccgggctaagtttcctgctagttcctgttctctctatgagtggga 48309635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 23012435 - 23012311
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||||   |||||||| |||| ||    |||| ||||||||||||| |||||| |    
T  23012435 gtggtggatagagtgaaactcttagtttggaattggttcatggctaagtgttgtgctagtttctgcacttatcatgaatgggaggtgcagcacgtcctgt 23012336  T
Q  167 gttgaaatcagtagggtttttgcgg 191  Q
    ||||| ||| |||||||||| ||||    
T  23012335 gttgacatcggtagggttttggcgg 23012311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 50655154 - 50655066
Alignment:
Q  82 aaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttg 170  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| |||| | || |||||||||||||||| || ||||| |||||    
T  50655154 aaactcttagcttggaagtggttcctggctaagtgtcctgctagttcttgctttttccatgagtgggaggtgcaacctgtcctttgttg 50655066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 24065194 - 24065097
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| | |   ||||| |||||||| || ||||||||    
T  24065194 gtggtggatagagtgaaactcttaacctggaagtggttcatggctaagtaccctgctagttcctgttgttattatgaatgggaggtacaacccgtcct 24065097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 30251492 - 30251395
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||  ||||| |||||| |  |||||||||||||| |||| |||||    
T  30251492 gtggtggatagagtgaaactcttggcttgaaagtggttcctggctaagtgccctggaagttcttgctctgttcatgagtgggaggtgtagccggtcct 30251395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 45068204 - 45068100
Alignment:
Q  82 aaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttgaaatcagtagg 181  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||| | ||    ||||| |||||||||| |||||||| |||||  |||||||||    
T  45068204 aaactcttagcttggaagtggttcctggctaagtgccctggcagttcctacacttatcatgagggggaggtgcaacccgtcctttgttggtatcagtagg 45068105  T
Q  182 gtttt 186  Q
    |||||    
T  45068104 gtttt 45068100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 4866794 - 4866876
Alignment:
Q  82 aaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| | ||| ||    |||||||||||||||| || |||||    
T  4866794 aaactcttagcttggaagtggttcctggctaagtgccttgctagtccttgcacttatcatgagtgggaggtgcaacctgtcct 4866876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 44616746 - 44616658
Alignment:
Q  76 agagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||| ||| ||||||||||| |||||| ||||||||||| ||| ||||| ||| ||| ||  | |||||||||||||||| ||||||||    
T  44616746 agagagaagctcttagcttgtaagtggctcatggctaagggccttgctaattcttgcacttacgatgagtgggaggtgcaacccgtcct 44616658  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 19469667 - 19469750
Alignment:
Q  86 tcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatgttg 170  Q
    |||||||||||||||||||| | | ||||||  |||||||||||||| ||    |||||||||||||| |||| ||||| |||||    
T  19469667 tcttagcttggaagtggttcctagttaagtg-tctgctagttcctgcacttatcatgagtgggaggtgtagcctgtcctttgttg 19469750  T

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Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 41650525 - 41650643
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||  | |||||| || |||||| |||||||| |    
T  41650525 gtggtggatagagcgaaactcttagcttggaagtggttcctggctaagtgctctgctagctcctgcacttaccatgagt-ggtggtgcaacccgtccttt 41650623  T
Q  167 gttgaaatcagtagggtttt 186  Q
    ||||  | ||||||||||||    
T  41650624 gttggcagcagtagggtttt 41650643  T

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Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 27639543 - 27639424
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| ||||  ||| |||||||||||||||||||||||||||| || ||||||||||| ||| ||    |||||| ||||||||| |||||||| |    
T  27639543 gtggtggatagagcaaaattcttagcttggaagtggttcatggctaaatgtcctgctagttcttgcacttatcatgagtaggaggtgcaacccgtccttt 27639444  T
Q  167 gttgaaatcagtagggtttt 186  Q
      |||||| |||||||||||    
T  27639443 actgaaattagtagggtttt 27639424  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 33861926 - 33862018
Alignment:
Q  71 tggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcct 164  Q
    |||| ||||||||||| || |||||||||||| ||  |||||||||||||| ||||||||||||| |  |||||||||||||| ||||||||||    
T  33861926 tggatagagtgaaact-ttggcttggaagtggctcccggctaagtgccctggtagttcctgctcttttcatgagtgggaggtgtagcccgtcct 33862018  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 3465396 - 3465280
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctatg 167  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||| ||| |  || ||||||||||| ||  | |||||||||||||||| ||| |||| ||    
T  3465396 tggtggatagagcgaaactcttagcttggaagtgtttcttggcgaagcgttctactagttcctgcacttaccatgagtgggaggtgcaacccatcctgtg 3465297  T
Q  168 ttgaaatcagtagggtt 184  Q
     ||  ||||||||||||    
T  3465296 ctggcatcagtagggtt 3465280  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 33672060 - 33672101
Alignment:
Q  63 gtcagtggtggacagagtgaaactcttagcttggaagtggtt 104  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  33672060 gtcagtggtggacaaagttaaactcttagcttggaagtggtt 33672101  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 33672896 - 33672946
Alignment:
Q  108 ggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcc 163  Q
    |||||||||||||||||||||||     |||||||||||||||||||| |||||||    
T  33672896 ggctaagtgccctgctagttcct-----ctctatgagtgggaggtgcaacccgtcc 33672946  T

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Target: scaffold0329 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 18520 - 18417
Alignment:
Q  67 gtggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttcctgctctctctatgagtgggaggtgcagcccgtcctat 166  Q
    |||||||| |||| ||||||| ||| ||| ||||| |||  ||||||||||||||||||||||||| ||    |||||||||||||||| ||||| || |    
T  18520 gtggtggatagagcgaaactcatagtttgaaagtgattctgggctaagtgccctgctagttcctgcacttatcatgagtgggaggtgcaacccgttctgt 18421  T
Q  167 gttg 170  Q
    ||||    
T  18420 gttg 18417  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 83311 - 83251
Alignment:
Q  68 tggtggacagagtgaaactcttagcttggaagtggttcatggctaagtgccctgctagttc 128  Q
    ||||||| | ||| ||||||||||||||||||||||||||| | ||||| |||||||||||    
T  83311 tggtggataaagtcaaactcttagcttggaagtggttcatgccgaagtgtcctgctagttc 83251  T

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