View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20935_low_11 (Length: 285)

Name: NF20935_low_11
Description: NF20935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20935_low_11
NF20935_low_11
[»] chr1 (25 HSPs)
chr1 (1-265)||(39066307-39066576)
chr1 (1-52)||(22077602-22077653)
chr1 (1-62)||(29798189-29798250)
chr1 (1-64)||(34364495-34364558)
chr1 (1-62)||(41184532-41184593)
chr1 (1-52)||(22077935-22077986)
chr1 (1-52)||(24600421-24600472)
chr1 (1-55)||(3537254-3537308)
chr1 (1-55)||(32594823-32594877)
chr1 (1-51)||(40082408-40082458)
chr1 (1-55)||(44290565-44290619)
chr1 (1-55)||(44290932-44290986)
chr1 (1-52)||(66579-66630)
chr1 (1-52)||(5320072-5320123)
chr1 (1-52)||(24132092-24132143)
chr1 (1-52)||(41142372-41142423)
chr1 (1-52)||(50469188-50469239)
chr1 (1-63)||(34364914-34364976)
chr1 (1-55)||(41759480-41759534)
chr1 (6-52)||(44685456-44685502)
chr1 (1-55)||(48588595-48588649)
chr1 (1-50)||(17294579-17294628)
chr1 (1-50)||(34649440-34649489)
chr1 (3-51)||(22793279-22793327)
chr1 (1-49)||(50052130-50052178)
[»] chr4 (27 HSPs)
chr4 (1-52)||(3244556-3244607)
chr4 (1-62)||(50002416-50002477)
chr4 (1-52)||(32941228-32941279)
chr4 (1-52)||(54741283-54741334)
chr4 (1-62)||(25483326-25483387)
chr4 (3-51)||(16888923-16888971)
chr4 (3-51)||(16889643-16889691)
chr4 (1-52)||(2740700-2740751)
chr4 (1-63)||(3341117-3341179)
chr4 (1-55)||(49880157-49880211)
chr4 (1-55)||(50630860-50630914)
chr4 (1-63)||(52884876-52884938)
chr4 (1-55)||(55933229-55933283)
chr4 (1-50)||(39404020-39404069)
chr4 (1-52)||(3700365-3700416)
chr4 (1-52)||(23556971-23557022)
chr4 (1-52)||(52884695-52884746)
chr4 (1-63)||(45489436-45489498)
chr4 (1-55)||(50788088-50788142)
chr4 (3-52)||(2741071-2741120)
chr4 (1-62)||(4955422-4955483)
chr4 (1-62)||(10245910-10245971)
chr4 (1-62)||(36608766-36608827)
chr4 (1-50)||(36629239-36629288)
chr4 (1-50)||(39792965-39793014)
chr4 (1-50)||(41707569-41707618)
chr4 (3-55)||(6975563-6975615)
[»] chr3 (25 HSPs)
chr3 (1-52)||(21832450-21832501)
chr3 (1-63)||(37991084-37991146)
chr3 (1-55)||(39389067-39389121)
chr3 (1-50)||(33175771-33175820)
chr3 (1-52)||(54017923-54017974)
chr3 (1-55)||(22304243-22304297)
chr3 (4-50)||(49336797-49336843)
chr3 (1-55)||(51886558-51886612)
chr3 (1-62)||(12114669-12114730)
chr3 (1-62)||(53577354-53577415)
chr3 (3-55)||(37726501-37726553)
chr3 (13-52)||(47965034-47965073)
chr3 (1-55)||(50612559-50612613)
chr3 (1-62)||(15772844-15772905)
chr3 (1-62)||(25739532-25739593)
chr3 (3-64)||(25755382-25755443)
chr3 (1-62)||(31190007-31190068)
chr3 (1-50)||(35946524-35946573)
chr3 (1-62)||(39914242-39914303)
chr3 (1-55)||(39935062-39935118)
chr3 (1-62)||(43346640-43346701)
chr3 (5-49)||(7767425-7767469)
chr3 (3-55)||(22304566-22304618)
chr3 (1-49)||(46546432-46546480)
chr3 (2-50)||(52634678-52634726)
[»] chr8 (22 HSPs)
chr8 (1-52)||(41972158-41972209)
chr8 (1-52)||(9608745-9608796)
chr8 (1-52)||(45122164-45122215)
chr8 (1-55)||(1014352-1014406)
chr8 (1-50)||(40518584-40518633)
chr8 (9-61)||(5915863-5915915)
chr8 (1-49)||(18372363-18372411)
chr8 (3-54)||(6731902-6731953)
chr8 (1-63)||(6876969-6877032)
chr8 (1-48)||(43398178-43398225)
chr8 (1-63)||(147818-147880)
chr8 (1-55)||(3669684-3669738)
chr8 (1-55)||(3670057-3670111)
chr8 (1-63)||(9309344-9309406)
chr8 (1-55)||(30441078-30441132)
chr8 (1-63)||(34834865-34834927)
chr8 (1-50)||(3038397-3038446)
chr8 (1-50)||(30359273-30359322)
chr8 (1-49)||(147454-147502)
chr8 (1-49)||(18372806-18372854)
chr8 (1-49)||(32640634-32640682)
chr8 (2-50)||(33113475-33113523)
[»] chr7 (23 HSPs)
chr7 (3-62)||(16569186-16569245)
chr7 (3-62)||(16596417-16596476)
chr7 (1-63)||(30244690-30244752)
chr7 (1-55)||(37533117-37533171)
chr7 (1-52)||(28301650-28301701)
chr7 (1-63)||(1085723-1085785)
chr7 (1-63)||(7554014-7554076)
chr7 (1-62)||(118408-118469)
chr7 (1-62)||(7517570-7517631)
chr7 (1-61)||(36109024-36109084)
chr7 (2-50)||(47129097-47129145)
chr7 (1-52)||(8128548-8128599)
chr7 (1-64)||(45434624-45434687)
chr7 (1-63)||(22566769-22566831)
chr7 (1-55)||(29157562-29157616)
chr7 (1-63)||(30255328-30255390)
chr7 (1-62)||(30245484-30245545)
chr7 (1-46)||(34218141-34218186)
chr7 (9-50)||(36967344-36967385)
chr7 (1-54)||(37533471-37533524)
chr7 (1-62)||(40094881-40094942)
chr7 (1-62)||(43241485-43241546)
chr7 (3-63)||(30244259-30244319)
[»] chr5 (27 HSPs)
chr5 (1-52)||(41632782-41632833)
chr5 (1-55)||(623815-623869)
chr5 (1-47)||(38427553-38427599)
chr5 (1-62)||(36492324-36492385)
chr5 (1-49)||(2411010-2411058)
chr5 (13-52)||(5541968-5542007)
chr5 (1-52)||(26074253-26074304)
chr5 (1-52)||(36568674-36568725)
chr5 (1-55)||(624193-624247)
chr5 (1-55)||(9498761-9498815)
chr5 (1-55)||(27502143-27502197)
chr5 (1-55)||(32487391-32487445)
chr5 (1-50)||(1028624-1028673)
chr5 (1-62)||(12662759-12662820)
chr5 (4-52)||(31509623-31509671)
chr5 (1-51)||(299490-299540)
chr5 (1-55)||(6500448-6500501)
chr5 (1-55)||(6500820-6500873)
chr5 (1-63)||(26074889-26074951)
chr5 (15-49)||(36522358-36522392)
chr5 (1-62)||(15370089-15370150)
chr5 (1-50)||(26075269-26075318)
chr5 (1-42)||(34753132-34753173)
chr5 (1-50)||(42405703-42405752)
chr5 (9-50)||(42524719-42524760)
chr5 (13-49)||(3622999-3623035)
chr5 (1-49)||(25327938-25327986)
[»] chr2 (21 HSPs)
chr2 (1-52)||(962598-962649)
chr2 (1-52)||(42514649-42514700)
chr2 (1-55)||(14745774-14745828)
chr2 (1-52)||(28531421-28531472)
chr2 (1-55)||(36178712-36178766)
chr2 (1-63)||(36785670-36785732)
chr2 (1-55)||(37106185-37106239)
chr2 (1-62)||(28254344-28254405)
chr2 (3-63)||(31468855-31468915)
chr2 (1-52)||(7598609-7598660)
chr2 (1-55)||(5543105-5543159)
chr2 (1-63)||(6712965-6713027)
chr2 (1-63)||(16542438-16542500)
chr2 (1-55)||(37105921-37105975)
chr2 (6-52)||(37632709-37632755)
chr2 (1-63)||(38796325-38796387)
chr2 (1-55)||(41283582-41283636)
chr2 (1-50)||(6421387-6421436)
chr2 (1-49)||(9231252-9231300)
chr2 (8-52)||(37894806-37894850)
chr2 (1-41)||(40163480-40163520)
[»] chr6 (19 HSPs)
chr6 (1-55)||(35210201-35210255)
chr6 (1-55)||(2378123-2378177)
chr6 (1-55)||(26544046-26544100)
chr6 (1-55)||(29518500-29518554)
chr6 (1-55)||(29518917-29518971)
chr6 (1-55)||(32741176-32741230)
chr6 (1-62)||(2579979-2580040)
chr6 (1-62)||(5958710-5958771)
chr6 (1-54)||(14748445-14748498)
chr6 (1-49)||(6999903-6999951)
chr6 (1-52)||(6071132-6071183)
chr6 (1-52)||(10074470-10074521)
chr6 (1-55)||(3058223-3058277)
chr6 (1-55)||(3409256-3409310)
chr6 (1-50)||(5832133-5832182)
chr6 (1-50)||(16107680-16107729)
chr6 (1-53)||(1846747-1846799)
chr6 (1-49)||(1950292-1950340)
chr6 (1-52)||(10911565-10911617)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-62)||(5386-5447)
scaffold0734 (1-63)||(5766-5828)
[»] scaffold0702 (1 HSPs)
scaffold0702 (1-55)||(249-303)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1-50)||(1213-1262)
scaffold0391 (1-63)||(3092-3154)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-52)||(5357-5408)
scaffold0078 (6-62)||(4972-5028)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-63)||(17563-17625)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 39066307 - 39066576
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacaccgtcacatgctgagatttagataagtattcttgattt 100  Q
    |||||||||||||||||||||||| ||||   | |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  39066307 tgttcaacctttacttttctatccgatgtggaatatataactcacacttgcacacaacaacaccgtcacatactgagatttagataagtattcttgattt 39066406  T
Q  101 tccaaaagaatactagaggctaaaaactctatg-----tactaaccagtgtctcagagttagcacgtagcatttctcaaactctatttgagatagcactc 195  Q
    ||||||||||||||||||||||||||||||||      |||||| || |||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  39066407 tccaaaagaatactagaggctaaaaactctataagttatactaatcaatgtctcggagttaccaggtagcatttctcaaactctatttgagatagcactc 39066506  T
Q  196 gacgatgttacatagaattgtattaatgtgtactatatatgcacacatccttgttgaacatgacatttct 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39066507 gacgatgttacatagaattgtattaatgtgtactatatatgcacacatccttgttgaacatgacatttct 39066576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22077602 - 22077653
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  22077602 tgttcaacctttacttttctatccgatgtgagacatataactcacacttgca 22077653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29798250 - 29798189
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||| || ||||||    
T  29798250 tgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaacaaca 29798189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34364558 - 34364495
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacacc 64  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||||||| || ||||||||    
T  34364558 tgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacacc 34364495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41184532 - 41184593
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||||||| || ||||||    
T  41184532 tgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaaca 41184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22077935 - 22077986
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||||||||||    
T  22077935 tgttcaacctttatttttctatccgatttaaaacatataactcacacttgca 22077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24600421 - 24600472
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| || |  |||||||||||||||||||||    
T  24600421 tgttcaacctttacttttctatccgatatgggacatataactcacacttgca 24600472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3537254 - 3537308
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  3537254 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 3537308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32594823 - 32594877
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||  ||||| ||||||||||||||||||||||||    
T  32594823 tgttcaacctttactattttatctgatgtaggacatataactcacacttgcaaac 32594877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40082458 - 40082408
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgc 51  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||||||||    
T  40082458 tgttcaacctttactattttatccgatgtaggacatataactcacacttgc 40082408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44290565 - 44290619
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  44290565 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 44290619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44290932 - 44290986
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  44290932 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 44290986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 66579 - 66630
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  66579 tgttcaacctttacttttctatccgatatggaacatataactcacacttgca 66630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5320072 - 5320123
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||| ||||||||||||||| ||||   ||||||||||||||||||||    
T  5320072 tgttcaacttttacttttctatccgatgtggaacatataactcacacttgca 5320123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24132092 - 24132143
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| |||   ||||||||||||||| |||||    
T  24132092 tgttcaacctttacttttctatccgatgagggacatataactcacagttgca 24132143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41142423 - 41142372
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||||    
T  41142423 tgttcaacctttactgttttatccgatgtgggacatataactcacacttgca 41142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50469188 - 50469239
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||  ||||  ||||| |||||||||||||||||||||    
T  50469188 tgttcaacctttactttattatctgatgtaggacatataactcacacttgca 50469239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34364976 - 34364914
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||| | || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  34364976 tgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaacaacac 34364914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41759534 - 41759480
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    |||||||| |||||| || ||||| ||||  ||||||||||||||||||||||||    
T  41759534 tgttcaacttttactattttatccgatgtgtgacatataactcacacttgcaaac 41759480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 44685502 - 44685456
Alignment:
Q  6 aacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||||||| || |  |||||||||||||||||||||    
T  44685502 aacctttacttttctatccgatatgggacatataactcacacttgca 44685456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48588595 - 48588649
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  |||||| |||||||||||||||||    
T  48588595 tgttcaacctttactattttatccgatgtcggacatagaactcacacttgcaaac 48588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17294628 - 17294579
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  17294628 tgttcaacctttactcttttatccgatgtgggacatataactcacacttg 17294579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34649489 - 34649440
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  34649489 tgttcaacctttactcttttatccgatgtgggacatataactcacacttg 34649440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 22793327 - 22793279
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgc 51  Q
    |||||||| ||||||||||| | ||||  ||||||||||||||||||||    
T  22793327 ttcaacctctacttttctatacgatgtgggacatataactcacacttgc 22793279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50052130 - 50052178
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||    
T  50052130 tgttcaacctttactattttatccgatgtgggacatataactcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3244556 - 3244607
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  3244556 tgttcaacctttacttttctatccgatgtgagacatataactcacacttgca 3244607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50002477 - 50002416
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| |||| ||||||||||||||||||||||||| ||||||    
T  50002477 tgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaacaaca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32941228 - 32941279
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  32941228 tgttcaacctttactgttctttccgatgtaagacatataactcacacttgca 32941279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 54741283 - 54741334
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  54741283 tgttcaacctttacttttctatccgatgtgagacatataattcacacttgca 54741334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25483387 - 25483326
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||||||| || ||||||    
T  25483387 tgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaaca 25483326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 16888923 - 16888971
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgc 51  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  16888923 ttcaacctttacttttctatccgatgtgggacatataactcacacttgc 16888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 16889643 - 16889691
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgc 51  Q
    |||||||||||||||||||||| || | |||||||||||||||||||||    
T  16889643 ttcaacctttacttttctatccgatttgagacatataactcacacttgc 16889691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2740751 - 2740700
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| |||||||| ||||  |||||||||||||||||||||    
T  2740751 tgttcaacctttactgttctatccgatgtgggacatataactcacacttgca 2740700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3341179 - 3341117
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    |||| |||||||||| || ||||||||||  ||||||||||||||||||||| || |||||||    
T  3341179 tgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaacac 3341117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 49880211 - 49880157
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||| ||||||  ||||||||||||||||||||||||    
T  49880211 tgttcaacctttactattttattcaatgtgggacatataactcacacttgcaaac 49880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 50630860 - 50630914
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||| |||||||||    
T  50630860 tgttcaacctttactattttatccgatgtaggacatataactcacgcttgcaaac 50630914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 52884938 - 52884876
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  52884938 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacac 52884876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 55933229 - 55933283
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||| ||||| || ||||| ||||| ||||||||||||||||||||||||    
T  55933229 tgttcaacccttactattttatccgatgtaggacatataactcacacttgcaaac 55933283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39404069 - 39404020
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||| ||||||| |||||||||||||||||||    
T  39404069 tgttcaacctttactcttttattcaatgtaggacatataactcacacttg 39404020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3700416 - 3700365
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||| |||||| || ||||| ||||| |||||||||||||||||||||    
T  3700416 tgttcaacatttactcttttatccgatgtaggacatataactcacacttgca 3700365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23556971 - 23557022
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||  |||||||||||| |||||| |||| |||||||||||||||    
T  23556971 tgttcaacctccacttttctatccgatgtaaaacatttaactcacacttgca 23557022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 52884746 - 52884695
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||||    
T  52884746 tgttcaacctttactattttatccgatgtgggacatataactcacacttgca 52884695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45489436 - 45489498
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| |||| |||||||||| ||||||||| | || |||||||    
T  45489436 tgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaacaacac 45489498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 50788088 - 50788142
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||| ||||||||||||    
T  50788088 tgttcaacctttactattttatccgatgtgggacatataacttacacttgcaaac 50788142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 2741120 - 2741071
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||| |||||||  ||||  |||||||||||||||||||||    
T  2741120 ttcaacctttactattctatctgatgtgggacatataactcacacttgca 2741071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4955422 - 4955483
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||| ||| || ||||| || | |||||||||||||||||||||| || ||||||    
T  4955422 tgttcaaccttaactattttatccgatatgagacatataactcacacttgcacacaacaaca 4955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10245971 - 10245910
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  | ||||||||||||||||||| || ||||||    
T  10245971 tgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36608766 - 36608827
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||| |||||| || ||||| ||||  ||||||||||||||||||||| || ||||||    
T  36608766 tgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36629288 - 36629239
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||| ||| ||||||||||||||| ||||  |||||||||||||||||||    
T  36629288 tgtttaacttttacttttctatccgatgtgggacatataactcacacttg 36629239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39792965 - 39793014
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||| ||||||||||||||  ||||  |||||||||||||||||||    
T  39792965 tgttcaacatttacttttctatctgatgtgggacatataactcacacttg 39793014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41707569 - 41707618
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  41707569 tgttcaacctttactcttttatccgatgtgggacatataactcacacttg 41707618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 6975563 - 6975615
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||| || ||||  |||| |||||||||||||||| ||||||||    
T  6975563 ttcaacctttactattttatcggatgtgagacatataactcacatttgcaaac 6975615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21832450 - 21832501
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21832450 tgttcaacctttacttttctatccaatgtgggacatataactcacacttgca 21832501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37991084 - 37991146
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||| | || |||||||    
T  37991084 tgttcaacctttactattttatccaatgtgagacatataactcacacttgtacacaacaacac 37991146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39389121 - 39389067
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||    
T  39389121 tgttcaacctttactattttatccgatgtaggacatataactcacacttgcaaac 39389067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33175771 - 33175820
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  33175771 tgttcaacctttacttttctatctgatgtgagacatataactcacacttg 33175820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 54017923 - 54017974
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||||||||||    
T  54017923 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 54017974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22304297 - 22304243
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  22304297 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 22304243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 49336797 - 49336843
Alignment:
Q  4 tcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||    
T  49336797 tcaacctttacttttctatccgatgtgagacatgtaactcacacttg 49336843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 51886612 - 51886558
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||| | |||| |||||||||||||||||||||||||    
T  51886612 tgttcaacctttactattttattcgatgtgagacatataactcacacttgcaaac 51886558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12114669 - 12114730
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||||||||||||||||||| ||||  || |||||||| ||||||||| || ||||||    
T  12114669 tgttcaacctttacttttctatccgatgtgggatatataacttacacttgcacacaacaaca 12114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53577415 - 53577354
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || ||||||    
T  53577415 tgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaacaaca 53577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 37726553 - 37726501
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    |||||| |||||| || ||||| |||| |||||||||||||||||||||||||    
T  37726553 ttcaacatttactattttatccgatgtgagacatataactcacacttgcaaac 37726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 47965034 - 47965073
Alignment:
Q  13 acttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  47965034 acttttctatccgatgtaaaacatataactcacacttgca 47965073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 50612559 - 50612613
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||| ||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  50612559 tgttcaatctttactattttatccgatgtgggacatataactcacacttgcaaac 50612613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15772905 - 15772844
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||| |||||| || ||||| || |  ||||||||||||||||||||| |||||||||    
T  15772905 tgttcaacatttactcttttatccgatatgggacatataactcacacttgcacacgacaaca 15772844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25739532 - 25739593
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||| |||||| || ||||| ||||  ||||||||||||||||||||| || ||||||    
T  25739532 tgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 25755443 - 25755382
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacacc 64  Q
    ||||||||||||| || ||||  |||| |||||||||||||||||||| | || ||||||||    
T  25755443 ttcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaacacc 25755382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31190068 - 31190007
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  ||||||| ||||||||||||| || ||||||    
T  31190068 tgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35946573 - 35946524
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  35946573 tgttcaacctttactgttttatccgatgtgggacatataactcacacttg 35946524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39914303 - 39914242
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||||| |||| || ||||  |||| |||||||||||||||||||||| || ||||||    
T  39914303 tgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaacaaca 39914242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39935062 - 39935118
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataa--ctcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||| |||||||||  |||||||||||||||    
T  39935062 tgttcaacctttactcttttatccgatgtaggacatataactctcacacttgcaaac 39935118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43346701 - 43346640
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  |||||| |||||||||||||| || ||||||    
T  43346701 tgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 7767425 - 7767469
Alignment:
Q  5 caacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    |||||||||||||||||||| ||||  ||||||||||||| ||||    
T  7767425 caacctttacttttctatccgatgtgggacatataactcagactt 7767469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 22304618 - 22304566
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||| || ||||| ||||  |||||||| |||||||||||||||    
T  22304618 ttcaacctttactattttatccgatgtgggacatatagctcacacttgcaaac 22304566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46546432 - 46546480
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||  || |||| |||||||||| ||||||||||||||||||    
T  46546432 tgttcaacctccacatttcaatccaatgtaggacatataactcacactt 46546480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 52634726 - 52634678
Alignment:
Q  2 gttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  52634726 gttcaacctttactgttttatccgatgtgggacatataactcacacttg 52634678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41972209 - 41972158
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  41972209 tgttcaacctttacttttctatccgatgtgggacatataactcacacttgca 41972158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9608796 - 9608745
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| || |  |||||||||||||||||||||    
T  9608796 tgttcaacctttacttttctatccgatatgggacatataactcacacttgca 9608745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45122164 - 45122215
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| || ||||| |||| ||||||||||||||||||||||    
T  45122164 tgttcaacctttactattttatccgatgtgagacatataactcacacttgca 45122215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1014352 - 1014406
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||  ||||| ||||||||||||||||||||||||    
T  1014352 tgttcaacctttactattttatctgatgtatgacatataactcacacttgcaaac 1014406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40518633 - 40518584
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  40518633 tgttcaacctttacttttctatctgatgtgggacatataactcacacttg 40518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 5915915 - 5915863
Alignment:
Q  9 ctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaac 61  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||| || |||||    
T  5915915 ctttacatttttatccaatgtaggacatataactcacacttgcacacaacaac 5915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18372363 - 18372411
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||||    
T  18372363 tgttcaacctttactattttatccgatgtgagacatataactcacactt 18372411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 6731953 - 6731902
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaa 54  Q
    ||||||||||||| || ||||| ||||  |||||||||||||||||||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacacttgcaaa 6731902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6876969 - 6877032
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagac-atataactcacacttgcaaacgacaacac 63  Q
    |||||||||||||||||| ||||| ||||  ||| |||||||||||||||||| || |||||||    
T  6876969 tgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaacaacac 6877032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43398178 - 43398225
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacact 48  Q
    |||||||||||||||||||||||| || | ||| ||||||||||||||    
T  43398178 tgttcaacctttacttttctatccgatatgagatatataactcacact 43398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 147880 - 147818
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    |||||||| ||||||||| ||||  ||||  ||||||||||||||||||||| || |||||||    
T  147880 tgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaacaacac 147818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3669738 - 3669684
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||  ||||  ||||||||||||||||||||||||    
T  3669738 tgttcaacctttactattttatctgatgtgggacatataactcacacttgcaaac 3669684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3670111 - 3670057
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    |||| |||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  3670111 tgttaaacctttactattttatccgatgtgggacatataactcacacttgcaaac 3670057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9309406 - 9309344
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    |||||||| |||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  9309406 tgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaacaacac 9309344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30441132 - 30441078
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || || || ||||  ||||||||||||||||||||||||    
T  30441132 tgttcaacctttactattttagccgatgtgggacatataactcacacttgcaaac 30441078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34834927 - 34834865
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    |||| |||||||||| || ||||||||||  ||||||||||||||||||| | || |||||||    
T  34834927 tgtttaacctttactattttatccaatgtgggacatataactcacacttgtacacaacaacac 34834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3038397 - 3038446
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  3038397 tgttcaacctttactattttatccgatgtgggacatataactcacacttg 3038446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30359322 - 30359273
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||| |||||| || ||||| |||| ||||||||||||||||||||    
T  30359322 tgttcaacatttactcttttatccgatgtgagacatataactcacacttg 30359273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 147502 - 147454
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||    
T  147502 tgttcaacctttactcttttatccgatgtgggacatataactcacactt 147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18372806 - 18372854
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||    
T  18372806 tgttcaacctttactattttatccgatgtgtgacatataactcacactt 18372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32640634 - 32640682
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| || ||||| |||| ||||| |||||||||||||    
T  32640634 tgttcaacctttactcttttatccgatgtgagacagataactcacactt 32640682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 33113475 - 33113523
Alignment:
Q  2 gttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||||||| || ||||| ||||| ||||||||||||| |||||    
T  33113475 gttcaacctttactattttatccgatgtaggacatataactcaaacttg 33113523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 16569245 - 16569186
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||||||| || ||||||    
T  16569245 ttcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16596417 - 16596476
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||||||| || ||||||    
T  16596417 ttcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30244752 - 30244690
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||||||||  ||||||||||||||||||||| || |||||||    
T  30244752 tgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaacac 30244690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37533117 - 37533171
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||||||||  ||||||||||||||||||||||||    
T  37533117 tgttcaacctttactattttatccaatgtgggacatataactcacacttgcaaac 37533171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28301650 - 28301701
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||| | ||||||||||||||| |||| ||||||||||||||||||||||    
T  28301650 tgttcagcttttacttttctatccgatgtgagacatataactcacacttgca 28301701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1085723 - 1085785
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  1085723 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacac 1085785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7554076 - 7554014
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  7554076 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacac 7554014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 118408 - 118469
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||||||||||||||||||  ||||  ||||||||||| ||||||||| || ||||||    
T  118408 tgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7517631 - 7517570
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || ||||||    
T  7517631 tgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36109024 - 36109084
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaac 61  Q
    ||||||||||||||| || ||||| |||| ||| |||||||||||||||||| || |||||    
T  36109024 tgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 47129145 - 47129097
Alignment:
Q  2 gttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||||||| || ||||| |||| ||||||||||||||||||||    
T  47129145 gttcaacctttactattttatccgatgtgagacatataactcacacttg 47129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8128548 - 8128599
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||| |||||||||| || |  |||||||||||||||||||||    
T  8128548 tgttcaacctttatttttctatccgatatgggacatataactcacacttgca 8128599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45434687 - 45434624
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacacc 64  Q
    |||||||||||||||||| ||||| ||||  ||||||||||| ||||||| | || ||||||||    
T  45434687 tgttcaacctttacttttttatccgatgtgggacatataacttacacttgtacacaacaacacc 45434624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22566769 - 22566831
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||| ||||||||||||| || |||||||    
T  22566769 tgttcaacctttactcttttatccgatgtgggacatattactcacacttgcatacaacaacac 22566831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29157616 - 29157562
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || |||||  |||  ||||||||||||||||||||||||    
T  29157616 tgttcaacctttactattttatccggtgtgggacatataactcacacttgcaaac 29157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30255390 - 30255328
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  |||||||||| |||||||||| || |||||||    
T  30255390 tgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaacac 30255328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30245545 - 30245484
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| || ||||||    
T  30245545 tgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 30245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34218141 - 34218186
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcaca 46  Q
    |||||||| ||||||||| ||||| |||| ||||||||||||||||    
T  34218141 tgttcaacatttacttttttatccgatgtgagacatataactcaca 34218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 36967344 - 36967385
Alignment:
Q  9 ctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||| ||||| |||| ||||||||||||||||||||    
T  36967344 ctttacttttttatccgatgtgagacatataactcacacttg 36967385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37533471 - 37533524
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaa 54  Q
    ||||||||||||||| || ||| |||||||  ||||||||||||||||| ||||    
T  37533471 tgttcaacctttactattttattcaatgtagaacatataactcacacttacaaa 37533524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40094881 - 40094942
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||| |||||||||| || ||| | |||| |||||||||||||||||||||| || ||||||    
T  40094881 tgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaacaaca 40094942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43241546 - 43241485
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||| |||| ||||| ||||   |||||||||||||||||||| || ||||||    
T  43241546 tgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaacaaca 43241485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 30244319 - 30244259
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||| || ||||| ||||  ||||||||||||||||||| | || |||||||    
T  30244319 ttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaacac 30244259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41632833 - 41632782
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  41632833 tgttcaacctttacttttctatccgatgtgagacatataacttacacttgca 41632782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 623869 - 623815
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||||||||||    
T  623869 tgttcaacctttactattatatccgatgtgagacatataactcacacttgcaaac 623815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38427599 - 38427553
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacac 47  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  38427599 tgttcaacctttacttttctatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36492324 - 36492385
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||||||| ||||||    
T  36492324 tgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaacaaca 36492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2411058 - 2411010
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  2411058 tgttcaacttttacttctctatccaatgtaggacatataactcacactt 2411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 5541968 - 5542007
Alignment:
Q  13 acttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  5541968 acttttctatccaatgtaaaacatataactcacacttgca 5542007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26074253 - 26074304
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||| ||||| ||||  |||||||||||||||||||||    
T  26074253 tgttcaacctttacttttttatccgatgtgtgacatataactcacacttgca 26074304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36568674 - 36568725
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||| ||||||||||||||| ||||  |||||||||||||||||||||    
T  36568674 tgttcaacttttacttttctatccgatgtgggacatataactcacacttgca 36568725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 624247 - 624193
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||| ||||||  ||||||||||||||||||||||||    
T  624247 tgttcaacctttactattttatacaatgtgggacatataactcacacttgcaaac 624193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9498761 - 9498815
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||| ||||||||    
T  9498761 tgttcaacctttactattctatctgatgtgagacatataactcacatttgcaaac 9498815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27502143 - 27502197
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    |||| |||||||||| || ||||||||||  ||||||||||||||||||||||||    
T  27502143 tgtttaacctttactattttatccaatgtgggacatataactcacacttgcaaac 27502197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32487445 - 32487391
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  32487445 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 32487391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1028624 - 1028673
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||| ||||||||||||||||| ||||  |||||||||||||||||||    
T  1028624 tgttcatcctttacttttctatccgatgtgggacatataactcacacttg 1028673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12662759 - 12662820
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || ||||||    
T  12662759 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 12662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 31509671 - 31509623
Alignment:
Q  4 tcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||  |||||||||||| |||| ||||||||||||||||||||||    
T  31509671 tcaacctccacttttctatccgatgtgagacatataactcacacttgca 31509623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 299540 - 299490
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgc 51  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||    
T  299540 tgttcaacctttactgttttatccgatgtgggacatataactcacacttgc 299490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6500501 - 6500448
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  6500501 tgttcaacctttactattttatccgatgtg-gacatataactcacacttgcaaac 6500448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6500873 - 6500820
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  6500873 tgttcaacctttactattttatccgatgtg-gacatataactcacacttgcaaac 6500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26074889 - 26074951
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||| | || |||||||    
T  26074889 tgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaacac 26074951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 36522358 - 36522392
Alignment:
Q  15 ttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| |||||||||||||||||||    
T  36522358 ttttctatccaatgtgagacatataactcacactt 36522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15370150 - 15370089
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||| | ||||  ||||||||||||||||||||| || ||||||    
T  15370150 tgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaacaaca 15370089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26075269 - 26075318
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| |||| |||||||||| |||||||||    
T  26075269 tgttcaacctttactcttttatccgatgtgagacatataaatcacacttg 26075318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34753132 - 34753173
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataact 42  Q
    |||||||| ||||||||||||||||||||  |||||||||||    
T  34753132 tgttcaacttttacttttctatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42405703 - 42405752
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  42405703 tgttcaacctttactattttatccgatgttggacatataactcacacttg 42405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 42524760 - 42524719
Alignment:
Q  9 ctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||||||||||||||| |||| |||||||||| |||||||||    
T  42524760 ctttacttttctatccgatgtgagacatataattcacacttg 42524719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 3622999 - 3623035
Alignment:
Q  13 acttttctatccaatgtaagacatataactcacactt 49  Q
    |||||||||||| || |||||||||||||||||||||    
T  3622999 acttttctatccgatttaagacatataactcacactt 3623035  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25327986 - 25327938
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    |||||||| |||||| || ||||| ||||| ||||||||||||||||||    
T  25327986 tgttcaacttttactgttttatccgatgtaggacatataactcacactt 25327938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 962649 - 962598
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  962649 tgttcaacctttacttttctatccgatgtgggacatataactcacacttgca 962598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42514700 - 42514649
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  42514700 tgttcaacctttacttttctatctgatgtaggacatataactcacacttgca 42514649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14745774 - 14745828
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||||||||  ||||||||||||||||||||||||    
T  14745774 tgttcaacctttactattttatccaatgtgggacatataactcacacttgcaaac 14745828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28531421 - 28531472
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  28531421 tgttcaacctttgcttttctatccgatgtgggacatataactcacacttgca 28531472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36178712 - 36178766
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  36178712 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 36178766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36785670 - 36785732
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  36785670 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacac 36785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37106239 - 37106185
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  37106239 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 37106185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28254344 - 28254405
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||||||||||||||||||| ||||  ||||||||| ||||||| ||| || ||||||    
T  28254344 tgttcaacctttacttttctatccgatgtgggacatataagtcacactggcacacaacaaca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 31468855 - 31468915
Alignment:
Q  3 ttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  31468855 ttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacac 31468915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7598660 - 7598609
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  7598660 tgttcaacctttacttttttatctgatgtgggacatataactcacacttgca 7598609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5543105 - 5543159
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||  ||||  ||||||||||||||||||||||||    
T  5543105 tgttcaacctttactattttatcggatgtgggacatataactcacacttgcaaac 5543159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6713027 - 6712965
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    |||||||| |||||| || ||||| |||| |||||||||||||||||||| | || |||||||    
T  6713027 tgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaacaacac 6712965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16542500 - 16542438
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||| ||||||||||||||||| || |||||||    
T  16542500 tgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaacaacac 16542438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37105975 - 37105921
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||| | ||||  ||||||||||||||||||||||||    
T  37105975 tgttcaacctttactattttattcgatgtgggacatataactcacacttgcaaac 37105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 37632709 - 37632755
Alignment:
Q  6 aacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||| || ||||| ||||| |||||||||||||||||||||    
T  37632709 aacctttactattttatccgatgtaggacatataactcacacttgca 37632755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38796325 - 38796387
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    |||||||| |||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  38796325 tgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaacac 38796387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41283582 - 41283636
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| || |  ||||||||||||||||||||||||    
T  41283582 tgttcaacctttactattttatccgatatgggacatataactcacacttgcaaac 41283636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6421436 - 6421387
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||    
T  6421436 tgttcaacctttactcttttatccgatgtgggacatataactcacacttg 6421387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9231300 - 9231252
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    |||||||||||||||||||||||  || | |||||||||||||| ||||    
T  9231300 tgttcaacctttacttttctatctgatatgagacatataactcatactt 9231252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 37894806 - 37894850
Alignment:
Q  8 cctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||    
T  37894806 cctttacttttctattcaatgtgggacatataactcacatttgca 37894850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40163480 - 40163520
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataac 41  Q
    |||||||||||||||||||||||| ||||  ||||||||||    
T  40163480 tgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35210255 - 35210201
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||||||||||    
T  35210255 tgttcaacctttactattttatccgatgtgagacatataactcacacttgcaaac 35210201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2378177 - 2378123
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  2378177 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 2378123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26544100 - 26544046
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  26544100 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 26544046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29518554 - 29518500
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  29518554 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 29518500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29518971 - 29518917
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  29518971 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 29518917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32741230 - 32741176
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  32741230 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 32741176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2579979 - 2580040
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || ||||||    
T  2579979 tgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 2580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5958710 - 5958771
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| |||||| |||||||||||||| ||||| || ||||||    
T  5958710 tgttcaacctttactgttttatccgatgtaacacatataactcacaattgcacaccacaaca 5958771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14748445 - 14748498
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaa 54  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||||||||||    
T  14748445 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaa 14748498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6999903 - 6999951
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    |||||||| ||||||||| ||||| ||||| ||||||||||||||||||    
T  6999903 tgttcaacttttacttttttatccgatgtaggacatataactcacactt 6999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6071183 - 6071132
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||  |||||||||| ||||||  |||||||||||||||||||||    
T  6071183 tgttcaacctccacttttctattcaatgtgggacatataactcacacttgca 6071132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10074470 - 10074521
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||||||||| ||||  ||| | |||||||||||||||    
T  10074470 tgttcaacctttacttttctatccgatgtgggacctctaactcacacttgca 10074521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3058277 - 3058223
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||| ||||||||||||    
T  3058277 tgttcaacctttactattttatccgatgtgggacatataactaacacttgcaaac 3058223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3409310 - 3409256
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||  ||||  ||||||||||||||||||||||||    
T  3409310 tgttcaacctttactattttatctgatgtgggacatataactcacacttgcaaac 3409256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5832133 - 5832182
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||||||||  ||||||||||| |||||||    
T  5832133 tgttcaacctttactcttttatccaatgtgggacatataacttacacttg 5832182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16107729 - 16107680
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    |||| ||||||||||||| ||||| |||| | ||||||||||||||||||    
T  16107729 tgtttaacctttacttttttatccgatgtgacacatataactcacacttg 16107680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1846799 - 1846747
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaa 53  Q
    ||||||||||||||| || ||||| |||| ||||||| || ||||||||||||    
T  1846799 tgttcaacctttactattttatccgatgtgagacatagaattcacacttgcaa 1846747  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1950292 - 1950340
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacactt 49  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||    
T  1950292 tgttcaacctttactcttttatccgatgtgggacatataactcacactt 1950340  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10911617 - 10911565
Alignment:
Q  1 tgttcaacctttacttttct-atccaatgtaagacatataactcacacttgca 52  Q
    |||||||||||||||||| | |||  ||||| |||||||||||||||||||||    
T  10911617 tgttcaacctttactttttttatctgatgtaggacatataactcacacttgca 10911565  T

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Target: scaffold0734 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5447 - 5386
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||||||||| || ||||||    
T  5447 tgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaacaaca 5386  T

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Target: scaffold0734; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5828 - 5766
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||| || |||||||    
T  5828 tgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaacac 5766  T

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Target: scaffold0702 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 249 - 303
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaac 55  Q
    ||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||    
T  249 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac 303  T

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Target: scaffold0391 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1213 - 1262
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttg 50  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||    
T  1213 tgttcaacctttactcttttatccaatgtgggacatataactcacacttg 1262  T

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Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3092 - 3154
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||||| |||| || |||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaacac 3154  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5408 - 5357
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgca 52  Q
    ||||||||||||||| |||||||| ||||   ||||||||||||||||||||    
T  5408 tgttcaacctttactgttctatccgatgtggaacatataactcacacttgca 5357  T

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Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 5028 - 4972
Alignment:
Q  6 aacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaaca 62  Q
    |||||||||| |||| ||| |||| |||||||||| ||||||||||| || ||||||    
T  5028 aacctttactgttctctccgatgtgagacatataattcacacttgcacacaacaaca 4972  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17563 - 17625
Alignment:
Q  1 tgttcaacctttacttttctatccaatgtaagacatataactcacacttgcaaacgacaacac 63  Q
    ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| || |||||||    
T  17563 tgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaacaacac 17625  T

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