View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20937_low_9 (Length: 255)

Name: NF20937_low_9
Description: NF20937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20937_low_9
NF20937_low_9
[»] chr4 (58 HSPs)
chr4 (68-234)||(10217044-10217210)
chr4 (40-234)||(10217106-10217300)
chr4 (37-230)||(10217193-10217386)
chr4 (37-234)||(10217283-10217480)
chr4 (55-212)||(10243386-10243543)
chr4 (55-234)||(10217391-10217570)
chr4 (53-194)||(10254370-10254511)
chr4 (55-191)||(10217511-10217647)
chr4 (43-234)||(10217529-10217720)
chr4 (79-234)||(10254276-10254431)
chr4 (88-234)||(10254540-10254686)
chr4 (64-176)||(10217670-10217782)
chr4 (55-218)||(10217331-10217494)
chr4 (79-194)||(10254216-10254331)
chr4 (88-223)||(10264608-10264743)
chr4 (37-188)||(10217253-10217404)
chr4 (55-194)||(10254567-10254706)
chr4 (91-233)||(10264761-10264903)
chr4 (37-234)||(10254609-10254806)
chr4 (79-191)||(10254336-10254448)
chr4 (46-234)||(10264656-10264844)
chr4 (55-218)||(10217151-10217314)
chr4 (94-233)||(10217220-10217359)
chr4 (127-234)||(10254519-10254626)
chr4 (37-191)||(10217613-10217767)
chr4 (65-191)||(10265065-10265191)
chr4 (109-194)||(10253946-10254031)
chr4 (40-188)||(10254207-10254355)
chr4 (23-62)||(10217014-10217053)
chr4 (37-188)||(10217343-10217494)
chr4 (158-221)||(10243369-10243432)
chr4 (54-193)||(10264604-10264743)
chr4 (46-189)||(10264806-10264949)
chr4 (55-188)||(10217091-10217224)
chr4 (53-234)||(10254340-10254521)
chr4 (103-179)||(10243539-10243615)
chr4 (127-231)||(10254099-10254203)
chr4 (55-179)||(10254537-10254661)
chr4 (91-234)||(10217637-10217780)
chr4 (23-62)||(10243339-10243378)
chr4 (94-185)||(10253991-10254082)
chr4 (130-225)||(10254237-10254332)
chr4 (100-194)||(10243371-10243465)
chr4 (112-194)||(10254534-10254616)
chr4 (94-188)||(10264914-10265008)
chr4 (169-234)||(10243665-10243730)
chr4 (91-224)||(10265001-10265134)
chr4 (109-161)||(10254141-10254193)
chr4 (55-191)||(10254402-10254538)
chr4 (103-182)||(10243659-10243738)
chr4 (144-234)||(10264604-10264694)
chr4 (73-194)||(10217724-10217845)
chr4 (66-119)||(10243517-10243570)
chr4 (160-201)||(10243791-10243832)
chr4 (115-180)||(10253862-10253927)
chr4 (121-190)||(10264971-10265040)
chr4 (73-137)||(10217784-10217848)
chr4 (130-234)||(10254207-10254311)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 10217044 - 10217210
Alignment:
Q  68 aacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagt 167  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10217044 aaccaccggtctacaagccccctgttgagaagccacctgtgtataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagt 10217143  T
Q  168 gtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||||||||||||||||||||||| || |||||| |||| |||||||||||||||||||||||||||    
T  10217144 gtacaagccaccagttgagaagccccccgtctacaaacctcctgtagagaagcctcctgtttacaag 10217210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 40 - 234
Target Start/End: Original strand, 10217106 - 10217300
Alignment:
Q  40 cctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagttt 139  Q
    ||||| |||||| |||||||||| |||||||| || || ||||| || || ||||||||||| || || || || || || ||||| |||||||| ||||    
T  10217106 cctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtctacaaacctcctgtagagaagcctcctgttt 10217205  T
Q  140 acaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  10217206 acaagccaccagtagagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaag 10217300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 230
Target Start/End: Original strand, 10217193 - 10217386
Alignment:
Q  37 aagcctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccag 136  Q
    |||||||| |||||| | ||||| || |||||||| || || ||||| || || ||||| ||||| || || || || ||||| ||||| ||||| || |    
T  10217193 aagcctcctgtttacaagccaccagtagagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctg 10217292  T
Q  137 tttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgttta 230  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  10217293 tttacaagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgttta 10217386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 234
Target Start/End: Original strand, 10217283 - 10217480
Alignment:
Q  37 aagcctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccag 136  Q
    ||||| || |||||| | ||||| || |||||||| || || ||||| || || ||||||||||| || || || || ||||| ||||| ||||| || |    
T  10217283 aagccacctgtttacaagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctg 10217382  T
Q  137 tttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  10217383 tttataagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcccccggtctacaaaccccctgtagagaagcctcctgtctacaag 10217480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 55 - 212
Target Start/End: Original strand, 10243386 - 10243543
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||      
T  10243386 ccaccagttgagaaacccccggtctacaaaccccctgtagaaaagccaccagtatataagccaccagtagagaagcctccagtttacaaaccaccggtgt 10243485  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgt 212  Q
    | || ||||| |||||||| || ||||| | ||| || || |||||| |||| |||||    
T  10243486 acaagccacctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgt 10243543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 234
Target Start/End: Original strand, 10217391 - 10217570
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| || |||||||| || || ||||| || || ||||||||||| || || || || || || ||||| |||||||| || ||||| ||||| ||||    
T  10217391 ccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcccccggtctacaaaccccctgtagagaagcctcctgtctacaagccaccagtag 10217490  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||| |||||||||| |||||||||||| | ||||||    
T  10217491 agaaaccgccagtgtacaagccaccagttgagaaacccccggtctacaaaccccctgttgagaagcctcctatctacaag 10217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 10254370 - 10254511
Alignment:
Q  53 aaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggt 152  Q
    ||||||| ||||||||||||||||| || || || || || ||||| ||||||||||| |||||||| || || ||||| ||| ||||||| ||||| ||    
T  10254370 aaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagt 10254469  T
Q  153 agagaaaccaccagtgtacaagccaccagttgagaagcctcc 194  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  10254470 agagaaaccacctgtatacaagccaccagttgagaagcctcc 10254511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 10217511 - 10217647
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||| ||||| || || ||||| ||||| ||||| || |    
T  10217511 ccaccagttgagaaacccccggtctacaaaccccctgttgagaagcctcctatctacaagccaccagtagagaaaccaccagtgtacaagccacctgttg 10217610  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcc 191  Q
    |||| || ||||| || ||||||||||||||||||||    
T  10217611 agaagcctccagtttataagccaccagttgagaagcc 10217647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 10217529 - 10217720
Alignment:
Q  43 ccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttaca 142  Q
    ||||| ||| |||| || |||||||| || ||  ||||||| || || || ||||| ||||| ||||| |||||||| || || |||||||||||||| |    
T  10217529 ccggtctacaaaccccctgttgagaagcctcctatctacaagccaccagtagagaaaccaccagtgtacaagccacctgttgagaagcctccagtttata 10217628  T
Q  143 aaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    | ||||| || ||||| ||||| ||||||||||| ||||| ||||| || ||||||||| |||| ||||||||||||||||| |||||||||    
T  10217629 agccaccagttgagaagccacctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaag 10217720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 10254276 - 10254431
Alignment:
Q  79 tacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccac 178  Q
    ||||| || ||||| || |||||||| ||||| |||||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||||||| ||||    
T  10254276 tacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagcctcctatatacaaaccaccagtagagaaaccaccagtgtacaaaccac 10254375  T
Q  179 cagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    | |||||||| || ||||| ||  | || || |||||||| || ||||| ||||||    
T  10254376 ccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtacaag 10254431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 234
Target Start/End: Original strand, 10254540 - 10254686
Alignment:
Q  88 cctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgaga 187  Q
    ||||| ||||| ||||| ||||| ||||||||||| || ||||| ||| ||||||||||||| || ||||| || ||||||||||||||||| |||||||    
T  10254540 cctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttgaga 10254639  T
Q  188 agcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    | || || |||||| | || |||||||| || || ||||||||||||    
T  10254640 aaccacctgtctacaagccacctgtagaaaatccacctgtttacaag 10254686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 10217670 - 10217782
Alignment:
Q  64 gagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccac 163  Q
    ||||||||||||||||||||||| ||||| |||||||| || || || |||||||||||  | || |||||||||||||| ||||| |||||||| ||||    
T  10217670 gagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttacaagccaccagtagagaagccac 10217769  T
Q  164 cagtgtacaagcc 176  Q
    | |||||||||||    
T  10217770 ctgtgtacaagcc 10217782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 218
Target Start/End: Original strand, 10217331 - 10217494
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| |||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| || || ||||| ||||| ||||| || |    
T  10217331 ccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaaaccaccagtgtacaagccaccagttg 10217430  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaa 218  Q
    |||| || || || ||||| || || || ||||||||||| |||||| | || || ||||||||    
T  10217431 agaagcccccggtctacaaaccccctgtagagaagcctcctgtctacaagccaccagtagagaa 10217494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 10254216 - 10254331
Alignment:
Q  79 tacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccac 178  Q
    ||||| ||||| |||||||| || || ||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||||||||||||||    
T  10254216 tacaagcccccagttgagaaacctccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagccaccagtgtacaagccac 10254315  T
Q  179 cagttgagaagcctcc 194  Q
    | || || ||||||||    
T  10254316 ctgtagaaaagcctcc 10254331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 10264608 - 10264743
Alignment:
Q  88 cctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgaga 187  Q
    ||||||||||| ||||||||  | |||||||| || || ||||  || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||    
T  10264608 cctgttgagaaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgaga 10264707  T
Q  188 agcctccggtctacgaaccccctgtagagaagcctc 223  Q
    |||| || || ||| |||| || |||||||||||||    
T  10264708 agcccccagtttacaaacctccagtagagaagcctc 10264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 10217253 - 10217404
Alignment:
Q  37 aagcctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccag 136  Q
    ||||||||||| ||| ||||||| || ||||| || || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||||| |    
T  10217253 aagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcctccgg 10217352  T
Q  137 tttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaa 188  Q
    | ||||||||||| |||||||| ||||| || || |||||||| || |||||    
T  10217353 tctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaa 10217404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 10254567 - 10254706
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    |||||||||||||| |||||  | |||||||| || ||||||||||| || ||||| ||||||||||| || || || || || ||||| ||||| ||||    
T  10254567 ccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttgagaaaccacctgtctacaagccacctgtag 10254666  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcctcc 194  Q
    | || ||||| || |||||||||||| ||||||| |||||    
T  10254667 aaaatccacctgtttacaagccaccatttgagaaacctcc 10254706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 233
Target Start/End: Original strand, 10264761 - 10264903
Alignment:
Q  91 gttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagc 190  Q
    ||||| || ||||||||  | |||||||| || || ||||  || |||||||| ||||| ||||||||||| || |||||||||||||||||||||||||    
T  10264761 gttgataaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccaccagttgagaagc 10264860  T
Q  191 ctccggtctacgaaccccctgtagagaagcctcctgtttacaa 233  Q
    | || ||  || |||| || |||||||||||||| ||| ||||    
T  10264861 ccccagttcacaaacctccagtagagaagcctccagttcacaa 10264903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 234
Target Start/End: Original strand, 10254609 - 10254806
Alignment:
Q  37 aagcctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccag 136  Q
    |||||||| || ||| | ||||||||||||||||| || |||||||| || ||||| || || |||||||| || ||||||||  | || || ||||||     
T  10254609 aagcctccagtgtacaagccaccggttgagaaaccacctgtctacaagccacctgtagaaaatccacctgtttacaagccaccatttgagaaacctccaa 10254708  T
Q  137 tttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||| ||||| ||  ||||| | ||||| ||||||||||| ||  ||||||| || ||  ||||| | || ||||||||||| |||||| ||||||||    
T  10254709 tttataaaccgccaatagagtatccacccgtgtacaagcccccttttgagaaaccccccatctacaagccacctgtagagaaacctcctttttacaag 10254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 191
Target Start/End: Original strand, 10254336 - 10254448
Alignment:
Q  79 tacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccac 178  Q
    |||||||| || || ||||| ||||| ||||| || ||||| || || || || || ||||| || ||||| |||||||||||||| |||||||||||||    
T  10254336 tacaaaccaccagtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtacaagccac 10254435  T
Q  179 cagttgagaagcc 191  Q
    |||||||||||||    
T  10254436 cagttgagaagcc 10254448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 234
Target Start/End: Original strand, 10264656 - 10264844
Alignment:
Q  46 gtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaac 145  Q
    |||||| | ||||| || |||||||| ||||| ||||| || |||||||||||||| || || || || || || ||||| ||||||| |||  |||| |    
T  10264656 gtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccagtttacaaacctccagtagagaagcctctagtgcacaagc 10264755  T
Q  146 caccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||| || || |||||||| ||  |||||||||||||||||||||  || || ||| | || ||||||||||| ||||| || ||||||    
T  10264756 caccagttgataaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaag 10264844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 218
Target Start/End: Original strand, 10217151 - 10217314
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || |||||||| ||||| || || ||||| ||||| ||||| || |    
T  10217151 ccaccagttgagaagccccccgtctacaaacctcctgtagagaagcctcctgtttacaagccaccagtagagaaaccaccagtgtacaagccaccagttg 10217250  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaa 218  Q
    | || || || || ||||| ||||| || |||||||| || || ||| | || |||||||||||    
T  10217251 aaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaa 10217314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 10217220 - 10217359
Alignment:
Q  94 gagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctc 193  Q
    ||||| ||||| ||||| |||||||| || ||||||||||| || ||||||||||| |||||||| ||||| || ||||||||||| || ||||| || |    
T  10217220 gagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaaaccac 10217319  T
Q  194 cggtctacgaaccccctgtagagaagcctcctgtttacaa 233  Q
    | || ||| | || || || ||||||||||| || |||||    
T  10217320 cagtgtacaagccaccagttgagaagcctccggtctacaa 10217359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 10254519 - 10254626
Alignment:
Q  127 aagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctg 226  Q
    ||||| |||||| | || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||  | ||| |||| || || ||||||||||| |    
T  10254519 aagccaccagttgagaagccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccag 10254618  T
Q  227 tttacaag 234  Q
    | ||||||    
T  10254619 tgtacaag 10254626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 191
Target Start/End: Original strand, 10217613 - 10217767
Alignment:
Q  37 aagcctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccag 136  Q
    |||||||| |||||  | ||||| |||||||| || || || ||||| ||||| || ||||| || || || || || || || ||||| ||||||||||    
T  10217613 aagcctccagtttataagccaccagttgagaagccacctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccag 10217712  T
Q  137 tttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcc 191  Q
    ||||||| ||||||||  | ||||| ||||| |||||||||||||| ||||||||    
T  10217713 tttacaagccaccggtgtacaaacctccagtttacaagccaccagtagagaagcc 10217767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 10265065 - 10265191
Alignment:
Q  65 agaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccacc 164  Q
    ||||||| ||||| ||||| || || ||||||||| | || || || || || ||| |||| |||||||||||  |||| |||||||| |||||||||||    
T  10265065 agaaacctccggtgtacaagccaccagttgagaagtccccagtttacaaacctccgttagagaagcctccagtgcacaagccaccggttgagaaaccacc 10265164  T
Q  165 agtgtacaagccaccagttgagaagcc 191  Q
     || |||||||||||| ||||||||||    
T  10265165 tgtatacaagccaccaattgagaagcc 10265191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 10253946 - 10254031
Alignment:
Q  109 tataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctcc 194  Q
    ||||||||||| |||||||| |||||| |||| |||||||| |||||||||||||| ||||| || |||||  ||||||| |||||    
T  10253946 tataagccacctgtagaaaatcctccaatttataaaccaccagtagagaaaccacccgtgtataaaccaccgtttgagaaacctcc 10254031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 10254207 - 10254355
Alignment:
Q  40 cctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagttt 139  Q
    ||||| |||||| | || || ||||||||||| || || ||||| || ||||| || |||||||| ||||| |||||||| ||||||||||| ||||| |    
T  10254207 cctcctgtttacaagcccccagttgagaaacctccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagccaccagtgt 10254306  T
Q  140 acaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaa 188  Q
    |||| ||||| ||||| || || ||  | ||||| |||||||| |||||    
T  10254307 acaagccacctgtagaaaagcctcctatatacaaaccaccagtagagaa 10254355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 10217014 - 10217053
Alignment:
Q  23 ttgccaattatgacaagcctccggtttaccaaccaccggt 62  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10217014 ttgccaattatgacaagcctccggtttaccaaccaccggt 10217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 10217343 - 10217494
Alignment:
Q  37 aagcctccggtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccag 136  Q
    ||||||||||| ||| ||||||| || ||||| || || || || || || ||||| ||||| ||||| ||||| |||||||| || || ||||| || |    
T  10217343 aagcctccggtctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcccccgg 10217442  T
Q  137 tttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaa 188  Q
    | |||||||| || |||||||| || || || |||||||||||||| |||||    
T  10217443 tctacaaaccccctgtagagaagcctcctgtctacaagccaccagtagagaa 10217494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 10243369 - 10243432
Alignment:
Q  158 aaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcc 221  Q
    ||||||| ||||| ||||||||||||||||| || ||||||||| ||||||||||||| |||||    
T  10243369 aaccaccggtgtataagccaccagttgagaaacccccggtctacaaaccccctgtagaaaagcc 10243432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 193
Target Start/End: Original strand, 10264604 - 10264743
Alignment:
Q  54 accaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggta 153  Q
    |||||| ||||||||||| || ||  |||| || || |||||||||| |||||| || |||||||| ||||| || ||||| || ||||| ||||| ||     
T  10264604 accacctgttgagaaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgtt 10264703  T
Q  154 gagaaaccaccagtgtacaagccaccagttgagaagcctc 193  Q
    ||||| || ||||| ||||| || ||||| ||||||||||    
T  10264704 gagaagcccccagtttacaaacctccagtagagaagcctc 10264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 10264806 - 10264949
Alignment:
Q  46 gtttaccaaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaac 145  Q
    |||||| | ||||| || |||||||| ||||| ||||| || || ||||||||||| || ||  | || || || ||||| |||||||||||| ||||||    
T  10264806 gtttacaagccacctgtagagaaacctccggtgtacaagccaccagttgagaagcccccagttcacaaacctccagtagagaagcctccagttcacaaac 10264905  T
Q  146 caccggtagagaaaccaccagtgtacaagccaccagttgagaag 189  Q
    | |  || ||||| ||||| || |||||||||||||||||||||    
T  10264906 ctcaagtggagaagccacctgtatacaagccaccagttgagaag 10264949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 10217091 - 10217224
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    |||||||| || ||||| || || |||||||| || || ||||| ||||| ||||| |||||||| || || ||||| || || |||||||| || ||||    
T  10217091 ccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtctacaaacctcctgtag 10217190  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaa 188  Q
    |||| || || || |||||||||||||| |||||    
T  10217191 agaagcctcctgtttacaagccaccagtagagaa 10217224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 10254340 - 10254521
Alignment:
Q  53 aaccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggt 152  Q
    ||||||| || |||||||| || || |||||||| || |||||||| || || || ||||||||||| ||||| || || || || ||||| ||||| ||    
T  10254340 aaccaccagtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtacaagccaccagt 10254439  T
Q  153 agagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
     ||||| || ||| | |||||||||||||| ||||| || || || ||| | || || || ||||||||||| | |||||||    
T  10254440 tgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagcctccagcttacaag 10254521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 10243539 - 10243615
Alignment:
Q  103 cctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccacc 179  Q
    ||||| || |||||||||||  | ||||| ||||||||||||||||| |||||||| || ||||| |||||||||||    
T  10243539 cctgtttacaagccaccggtgtacaagccaccagtttacaaaccaccagtagagaagcccccagtttacaagccacc 10243615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 10254099 - 10254203
Alignment:
Q  127 aagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctg 226  Q
    |||||||| || ||||||||||| |||||| |||| || || || ||||||||||| |||||||||||  | ||| | || || |||||||| |||||||    
T  10254099 aagcctcctgtatacaaaccaccagtagagcaacctcccgtctataagccaccagtagagaagcctccaatttacaagccaccagtagagaaacctcctg 10254198  T
Q  227 tttac 231  Q
    |||||    
T  10254199 tttac 10254203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 10254537 - 10254661
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| || |||||||| || || ||||| || || ||||||||||| ||  | || || ||||| || || ||||||||||| ||||| |||||||| |    
T  10254537 ccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttg 10254636  T
Q  155 agaaaccaccagtgtacaagccacc 179  Q
    |||||||||| || |||||||||||    
T  10254637 agaaaccacctgtctacaagccacc 10254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 234
Target Start/End: Original strand, 10217637 - 10217780
Alignment:
Q  91 gttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagc 190  Q
    |||||||||||||||||||| ||||| || || || || || || || |||||||| || |||||||| || ||||| ||||||||||| ||  | || |    
T  10217637 gttgagaagccacctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaac 10217736  T
Q  191 ctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||| || ||| | || || ||||||||||| ||||| ||||||    
T  10217737 ctccagtttacaagccaccagtagagaagccacctgtgtacaag 10217780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 10243339 - 10243378
Alignment:
Q  23 ttgccaattatgacaagcctccggtttaccaaccaccggt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  10243339 ttgccaattatgagaagcctccggtttaccaaccaccggt 10243378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 10253991 - 10254082
Alignment:
Q  94 gagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttga 185  Q
    ||||| ||||| |||||||| |||||| | || || |||||| | ||| | ||||| ||||||| ||||||||||||||| |||||||||||    
T  10253991 gagaaaccacccgtgtataaaccaccgtttgagaaacctccaatctaccatccaccagtagagataccaccagtgtacaacccaccagttga 10254082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 10254237 - 10254332
Alignment:
Q  130 cctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcct 225  Q
    |||||||| ||||| ||||| ||||| || |||||||||||||||||||| || || ||||| || || ||| | || |||||||| |||||||||    
T  10254237 cctccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagcctcct 10254332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 10243371 - 10243465
Alignment:
Q  100 ccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctcc 194  Q
    ||||| |||||||||||||| || || || || || || |||||||| || ||||| || |||||||| || ||||||||||| |||||||||||    
T  10243371 ccaccggtgtataagccaccagttgagaaacccccggtctacaaaccccctgtagaaaagccaccagtatataagccaccagtagagaagcctcc 10243465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 10254534 - 10254616
Alignment:
Q  112 aagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctcc 194  Q
    |||||||| ||||| || || ||||| ||||| |||||||| ||||| || ||| | ||||| ||||||||||||||||||||    
T  10254534 aagccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctcc 10254616  T

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Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 10264914 - 10265008
Alignment:
Q  94 gagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaa 188  Q
    |||||||||||||| || |||||||| || || |||  |||| |||||||||| |  |||||||| || |||||| ||||||||| |||||||||    
T  10264914 gagaagccacctgtatacaagccaccagttgagaagtttccaatttacaaacctctagtagagaagcctccagtgcacaagccacgagttgagaa 10265008  T

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Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 10243665 - 10243730
Alignment:
Q  169 tacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||||||||||||||||||||||||| || ||| | || || |||| |||||| ||||||||||||    
T  10243665 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaag 10243730  T

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Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 224
Target Start/End: Original strand, 10265001 - 10265134
Alignment:
Q  91 gttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagc 190  Q
    |||||||| ||||||||  | |||||||| || || ||||  ||  ||||||| ||||| | | ||||||| || ||||||||||||||||||||||||     
T  10265001 gttgagaaaccacctgtacacaagccaccagttgagaagctacctttttacaagccacctgcaaagaaacctccggtgtacaagccaccagttgagaagt 10265100  T
Q  191 ctccggtctacgaaccccctgtagagaagcctcc 224  Q
    | || || ||| |||| ||  |||||||||||||    
T  10265101 ccccagtttacaaacctccgttagagaagcctcc 10265134  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 10254141 - 10254193
Alignment:
Q  109 tataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaacc 161  Q
    ||||||||||| ||||| ||||||||| ||||||| ||||| |||||||||||    
T  10254141 tataagccaccagtagagaagcctccaatttacaagccaccagtagagaaacc 10254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 10254402 - 10254538
Alignment:
Q  55 ccaccggttgagaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtag 154  Q
    ||||| || |||||||| || || ||||| || || ||||||||||| ||  | || |||||||| ||||| || || || || ||||| ||||| || |    
T  10254402 ccaccagtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttg 10254501  T
Q  155 agaaaccaccagtgtacaagccaccagttgagaagcc 191  Q
    |||| || ||||  |||||||||||||||||||||||    
T  10254502 agaagcctccagcttacaagccaccagttgagaagcc 10254538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 10243659 - 10243738
Alignment:
Q  103 cctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagt 182  Q
    ||||| || |||||||| || || ||||||||||||||||| ||||| |||| ||| ||||| || |||||||| |||||    
T  10243659 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcccccagt 10243738  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 10264604 - 10264694
Alignment:
Q  144 accaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgtttacaag 234  Q
    |||||| || ||||||||||| ||  |||||||||||||||||||||  || || ||| | || ||||||||||| ||||| || ||||||    
T  10264604 accacctgttgagaaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaag 10264694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 10217724 - 10217845
Alignment:
Q  73 ccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtaca 172  Q
    ||||| |||||||| || ||| | |||||||| ||  | |||||||| ||  | |||||||| || |||||||| || || |||||||| ||||| ||||    
T  10217724 ccggtgtacaaacctccagtttacaagccaccagtagagaagccacctgtgtacaagcctccggtctacaaacccccagttgagaaacctccagtttaca 10217823  T
Q  173 agccaccagttgagaagcctcc 194  Q
    ||||||| ||| | ||||||||    
T  10217824 agccaccggtttacaagcctcc 10217845  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 10243517 - 10243570
Alignment:
Q  66 gaaacccccggtctacaaaccccctgttgagaagccacctgtgtataagccacc 119  Q
    ||||||||| ||||||||||| |||||| | |||||||| ||||| ||||||||    
T  10243517 gaaacccccagtctacaaacctcctgtttacaagccaccggtgtacaagccacc 10243570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 10243791 - 10243832
Alignment:
Q  160 ccaccagtgtacaagccaccagttgagaagcctccggtctac 201  Q
    ||||| || |||||||| ||||||||||||||||||||||||    
T  10243791 ccacccgtttacaagcctccagttgagaagcctccggtctac 10243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 10253862 - 10253927
Alignment:
Q  115 ccaccggtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccacca 180  Q
    ||||| || ||||| || ||| |||| ||||||||||||||||||||||| ||||| || ||||||    
T  10253862 ccaccagttgaaaatcccccattttataaaccaccggtagagaaaccacctgtgtataaaccacca 10253927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 10264971 - 10265040
Alignment:
Q  121 gtagaaaagcctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagc 190  Q
    ||||| |||||||||||  |||| ||||  || ||||||||||| ||  |||||||||||||||||||||    
T  10264971 gtagagaagcctccagtgcacaagccacgagttgagaaaccacctgtacacaagccaccagttgagaagc 10265040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 10217784 - 10217848
Alignment:
Q  73 ccggtctacaaaccccctgttgagaagccacctgtgtataagccaccggtagaaaagcctccagt 137  Q
    ||||||||||||||||| |||||||| || || || || |||||||||||  | |||||||||||    
T  10217784 ccggtctacaaacccccagttgagaaacctccagtttacaagccaccggtttacaagcctccagt 10217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 10254207 - 10254311
Alignment:
Q  130 cctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacgaaccccctgtagagaagcctcctgttt 229  Q
    ||||| |||||||| || || || |||||||| ||||||||||||||||| || || ||||| || || ||| | || |||||||| ||||| || || |    
T  10254207 cctcctgtttacaagcccccagttgagaaacctccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagccaccagtgt 10254306  T
Q  230 acaag 234  Q
    |||||    
T  10254307 acaag 10254311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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