View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20939_low_8 (Length: 265)

Name: NF20939_low_8
Description: NF20939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20939_low_8
NF20939_low_8
[»] chr1 (22 HSPs)
chr1 (5-262)||(41394352-41394609)
chr1 (1-212)||(20931471-20931682)
chr1 (5-212)||(20913160-20913367)
chr1 (40-212)||(37844374-37844548)
chr1 (5-212)||(20893551-20893759)
chr1 (5-212)||(20445809-20446019)
chr1 (5-212)||(20531574-20531783)
chr1 (5-126)||(5072388-5072509)
chr1 (5-126)||(18601118-18601239)
chr1 (5-213)||(45051553-45051759)
chr1 (1-138)||(51452618-51452755)
chr1 (5-126)||(2116385-2116506)
chr1 (7-211)||(22227941-22228146)
chr1 (7-211)||(22232638-22232843)
chr1 (180-252)||(21860334-21860406)
chr1 (180-252)||(44034831-44034903)
chr1 (180-252)||(41218728-41218800)
chr1 (146-252)||(27675086-27675190)
chr1 (196-252)||(13376712-13376768)
chr1 (180-211)||(15861327-15861358)
chr1 (81-121)||(16646118-16646158)
chr1 (180-212)||(51452809-51452841)
[»] chr3 (52 HSPs)
chr3 (1-262)||(16743991-16744252)
chr3 (5-212)||(13839024-13839232)
chr3 (5-212)||(14842487-14842694)
chr3 (5-212)||(2049940-2050147)
chr3 (5-212)||(12030073-12030280)
chr3 (75-252)||(19231981-19232161)
chr3 (5-148)||(51158008-51158151)
chr3 (5-175)||(15858986-15859157)
chr3 (5-126)||(55316350-55316471)
chr3 (5-126)||(41270206-41270327)
chr3 (92-212)||(19260749-19260869)
chr3 (1-138)||(17912483-17912619)
chr3 (5-131)||(15936634-15936760)
chr3 (1-138)||(2449238-2449375)
chr3 (5-138)||(13975722-13975854)
chr3 (5-138)||(45860936-45861068)
chr3 (5-213)||(15614964-15615170)
chr3 (5-131)||(15938476-15938602)
chr3 (5-138)||(13954890-13955022)
chr3 (1-101)||(16821266-16821366)
chr3 (180-252)||(3992873-3992945)
chr3 (180-252)||(55513193-55513265)
chr3 (177-252)||(15857123-15857198)
chr3 (180-252)||(2844514-2844586)
chr3 (180-235)||(17955861-17955916)
chr3 (180-252)||(54037984-54038056)
chr3 (180-252)||(7854305-7854377)
chr3 (180-241)||(45581954-45582016)
chr3 (42-131)||(11986173-11986262)
chr3 (81-122)||(14080715-14080756)
chr3 (180-212)||(2449152-2449184)
chr3 (38-122)||(4145814-4145898)
chr3 (180-212)||(16261777-16261809)
chr3 (180-212)||(16933869-16933901)
chr3 (196-252)||(17191879-17191935)
chr3 (180-212)||(17912398-17912430)
chr3 (180-212)||(23492696-23492728)
chr3 (180-212)||(38168237-38168269)
chr3 (180-212)||(53771365-53771397)
chr3 (40-121)||(30207380-30207462)
chr3 (38-122)||(6228625-6228710)
chr3 (180-212)||(11986080-11986112)
chr3 (180-212)||(13954804-13954836)
chr3 (81-121)||(14059214-14059254)
chr3 (180-212)||(14285289-14285321)
chr3 (196-252)||(17205019-17205075)
chr3 (180-212)||(19947026-19947058)
chr3 (180-212)||(30153265-30153297)
chr3 (180-212)||(33342204-33342236)
chr3 (180-252)||(38810869-38810941)
chr3 (180-212)||(45861122-45861154)
chr3 (180-212)||(51961031-51961063)
[»] chr2 (36 HSPs)
chr2 (5-252)||(20627198-20627446)
chr2 (7-212)||(462870-463075)
chr2 (5-252)||(43642841-43643090)
chr2 (5-250)||(19794591-19794837)
chr2 (5-212)||(36982364-36982574)
chr2 (5-212)||(8891372-8891581)
chr2 (2-126)||(19886661-19886785)
chr2 (5-212)||(24341309-24341522)
chr2 (5-138)||(25265390-25265523)
chr2 (1-138)||(19689401-19689538)
chr2 (1-138)||(23820197-23820334)
chr2 (116-212)||(22863169-22863267)
chr2 (1-138)||(14906440-14906577)
chr2 (5-138)||(17396653-17396785)
chr2 (180-252)||(22284278-22284350)
chr2 (1-138)||(20015137-20015274)
chr2 (180-252)||(22275045-22275117)
chr2 (7-88)||(7507894-7507975)
chr2 (181-252)||(15633538-15633609)
chr2 (40-121)||(68156-68238)
chr2 (180-213)||(19689314-19689347)
chr2 (180-212)||(9652796-9652828)
chr2 (180-212)||(14906354-14906386)
chr2 (180-212)||(23820388-23820420)
chr2 (180-211)||(25213372-25213403)
chr2 (40-121)||(22775206-22775288)
chr2 (40-121)||(22780584-22780666)
chr2 (180-212)||(7507757-7507789)
chr2 (180-212)||(17396567-17396599)
chr2 (180-252)||(19666848-19666920)
chr2 (180-212)||(20015328-20015360)
chr2 (180-212)||(28031134-28031166)
chr2 (146-212)||(31146073-31146138)
chr2 (180-212)||(33128372-33128404)
chr2 (42-121)||(43646059-43646139)
chr2 (196-252)||(43646232-43646288)
[»] scaffold0023 (3 HSPs)
scaffold0023 (5-212)||(48728-48935)
scaffold0023 (1-101)||(36220-36320)
scaffold0023 (180-212)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (5-212)||(3508-3715)
scaffold0266 (5-212)||(1254-1462)
[»] chr8 (33 HSPs)
chr8 (5-212)||(16193643-16193849)
chr8 (5-252)||(16404860-16405108)
chr8 (5-212)||(24928716-24928924)
chr8 (5-212)||(43373392-43373601)
chr8 (5-126)||(30120853-30120974)
chr8 (5-126)||(16674392-16674513)
chr8 (1-138)||(5238213-5238350)
chr8 (5-126)||(6774258-6774379)
chr8 (1-138)||(22907214-22907351)
chr8 (1-138)||(24661248-24661385)
chr8 (1-138)||(43685672-43685809)
chr8 (5-138)||(17345699-17345832)
chr8 (5-126)||(24549112-24549233)
chr8 (5-122)||(21844576-21844693)
chr8 (1-64)||(222753-222816)
chr8 (1-64)||(736376-736439)
chr8 (1-64)||(860271-860334)
chr8 (2-64)||(691908-691970)
chr8 (5-122)||(21851969-21852086)
chr8 (180-252)||(274766-274838)
chr8 (180-252)||(641011-641083)
chr8 (180-252)||(826817-826889)
chr8 (180-252)||(24716722-24716794)
chr8 (180-252)||(39115598-39115670)
chr8 (180-212)||(5238404-5238436)
chr8 (180-212)||(22907128-22907160)
chr8 (180-212)||(24385652-24385684)
chr8 (180-212)||(24661162-24661194)
chr8 (180-212)||(43685863-43685895)
chr8 (40-122)||(26011658-26011741)
chr8 (180-212)||(2545265-2545297)
chr8 (180-212)||(3431176-3431208)
chr8 (180-212)||(22886654-22886686)
[»] chr7 (45 HSPs)
chr7 (5-252)||(3060096-3060343)
chr7 (5-212)||(16211896-16212103)
chr7 (5-212)||(13036938-13037147)
chr7 (5-212)||(11580661-11580872)
chr7 (5-212)||(36052794-36053003)
chr7 (5-126)||(10989540-10989661)
chr7 (7-127)||(2437590-2437710)
chr7 (7-138)||(47481031-47481162)
chr7 (5-126)||(13911024-13911145)
chr7 (5-131)||(18253842-18253968)
chr7 (1-138)||(11516353-11516490)
chr7 (1-138)||(15441564-15441701)
chr7 (1-138)||(30262129-30262266)
chr7 (1-138)||(7293142-7293279)
chr7 (5-101)||(16478987-16479083)
chr7 (42-137)||(13321183-13321278)
chr7 (5-138)||(25292338-25292471)
chr7 (5-122)||(13572807-13572924)
chr7 (180-252)||(126738-126810)
chr7 (180-252)||(32493906-32493978)
chr7 (17-210)||(295893-296087)
chr7 (180-245)||(1936884-1936949)
chr7 (180-252)||(111129-111201)
chr7 (106-212)||(36024372-36024485)
chr7 (181-252)||(7283916-7283987)
chr7 (146-252)||(13377819-13377923)
chr7 (40-121)||(13377693-13377775)
chr7 (180-212)||(2029244-2029276)
chr7 (180-212)||(7293333-7293365)
chr7 (180-212)||(11516544-11516576)
chr7 (180-212)||(14113903-14113935)
chr7 (180-212)||(15441478-15441510)
chr7 (143-212)||(15709428-15709501)
chr7 (180-212)||(30262043-30262075)
chr7 (180-212)||(42056188-42056220)
chr7 (40-122)||(16914928-16915011)
chr7 (180-212)||(371417-371449)
chr7 (180-212)||(3049905-3049937)
chr7 (180-212)||(13321334-13321366)
chr7 (196-252)||(13389693-13389749)
chr7 (106-138)||(14113989-14114021)
chr7 (106-138)||(14423639-14423671)
chr7 (180-208)||(15516765-15516793)
chr7 (180-212)||(25124450-25124482)
chr7 (180-212)||(47480944-47480976)
[»] chr4 (28 HSPs)
chr4 (5-212)||(122019-122226)
chr4 (5-250)||(54118130-54118377)
chr4 (5-212)||(13246560-13246769)
chr4 (5-212)||(15675009-15675222)
chr4 (1-126)||(47357781-47357906)
chr4 (5-212)||(10104170-10104383)
chr4 (1-138)||(26680326-26680463)
chr4 (75-212)||(33240900-33241043)
chr4 (1-138)||(10488688-10488825)
chr4 (1-138)||(16327926-16328063)
chr4 (1-122)||(10644346-10644467)
chr4 (5-138)||(13048221-13048354)
chr4 (180-252)||(25119067-25119139)
chr4 (106-212)||(31132545-31132657)
chr4 (41-111)||(31115795-31115865)
chr4 (40-122)||(40885570-40885652)
chr4 (180-252)||(5682388-5682460)
chr4 (40-121)||(15044992-15045074)
chr4 (180-212)||(14952085-14952117)
chr4 (180-212)||(15135907-15135939)
chr4 (180-212)||(15272211-15272243)
chr4 (180-212)||(16327840-16327872)
chr4 (180-212)||(16609013-16609045)
chr4 (180-212)||(26680517-26680549)
chr4 (40-121)||(15109350-15109432)
chr4 (180-212)||(8045272-8045304)
chr4 (180-212)||(16523146-16523178)
chr4 (180-252)||(41165809-41165881)
[»] scaffold0106 (1 HSPs)
scaffold0106 (5-212)||(41859-42066)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-212)||(172031-172242)
scaffold0001 (1-212)||(177734-177945)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-210)||(51110-51315)
[»] scaffold0175 (1 HSPs)
scaffold0175 (5-212)||(882-1089)
[»] chr5 (34 HSPs)
chr5 (5-212)||(23507095-23507302)
chr5 (5-212)||(27182471-27182680)
chr5 (1-126)||(22366481-22366606)
chr5 (2-126)||(19500027-19500151)
chr5 (2-126)||(25426756-25426880)
chr5 (1-123)||(18777995-18778117)
chr5 (5-212)||(22053753-22053966)
chr5 (2-126)||(12502-12626)
chr5 (7-212)||(18530988-18531198)
chr5 (2-126)||(21073595-21073719)
chr5 (5-123)||(43443398-43443516)
chr5 (1-126)||(4199985-4200110)
chr5 (1-138)||(20623095-20623232)
chr5 (1-138)||(21233528-21233665)
chr5 (5-138)||(34939407-34939540)
chr5 (5-126)||(29188284-29188405)
chr5 (1-136)||(25900408-25900543)
chr5 (1-138)||(16536323-16536460)
chr5 (1-138)||(37052870-37053007)
chr5 (8-122)||(27009975-27010089)
chr5 (181-252)||(11584374-11584445)
chr5 (38-122)||(29918127-29918212)
chr5 (42-131)||(32950862-32950951)
chr5 (180-212)||(16105967-16105999)
chr5 (180-212)||(20623286-20623318)
chr5 (180-212)||(21233442-21233474)
chr5 (180-212)||(25900320-25900352)
chr5 (180-212)||(37053061-37053093)
chr5 (40-122)||(21310709-21310792)
chr5 (40-121)||(5450844-5450926)
chr5 (180-212)||(108728-108760)
chr5 (180-212)||(9730278-9730310)
chr5 (180-212)||(16536514-16536546)
chr5 (81-121)||(16595713-16595753)
[»] scaffold0413 (1 HSPs)
scaffold0413 (5-212)||(5990-6197)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-213)||(36836-37050)
scaffold0077 (181-252)||(15327-15398)
[»] chr6 (31 HSPs)
chr6 (5-212)||(23153577-23153786)
chr6 (7-211)||(14626045-14626249)
chr6 (1-126)||(25175690-25175815)
chr6 (1-126)||(27653983-27654108)
chr6 (1-126)||(16825752-16825879)
chr6 (5-138)||(1657748-1657881)
chr6 (5-138)||(35009439-35009572)
chr6 (5-213)||(1650020-1650226)
chr6 (5-138)||(15862601-15862734)
chr6 (143-212)||(23148266-23148335)
chr6 (180-252)||(19983152-19983224)
chr6 (180-252)||(35015017-35015089)
chr6 (53-138)||(27751603-27751688)
chr6 (180-252)||(18583640-18583712)
chr6 (42-138)||(29666041-29666137)
chr6 (38-122)||(29605612-29605696)
chr6 (180-212)||(18002395-18002427)
chr6 (180-212)||(23995247-23995279)
chr6 (180-212)||(26090059-26090091)
chr6 (180-211)||(4991396-4991427)
chr6 (40-122)||(18629608-18629691)
chr6 (182-212)||(15742120-15742150)
chr6 (38-120)||(17083200-17083282)
chr6 (180-212)||(1657661-1657693)
chr6 (180-212)||(15862789-15862821)
chr6 (81-121)||(18399144-18399184)
chr6 (180-212)||(18823283-18823315)
chr6 (180-212)||(18839138-18839170)
chr6 (196-252)||(21623506-21623562)
chr6 (180-212)||(27751742-27751774)
chr6 (180-212)||(32276659-32276691)
[»] scaffold0195 (2 HSPs)
scaffold0195 (5-209)||(19336-19543)
scaffold0195 (5-138)||(21420-21553)
[»] scaffold0008 (2 HSPs)
scaffold0008 (5-212)||(128095-128302)
scaffold0008 (5-101)||(31700-31796)
[»] scaffold0012 (2 HSPs)
scaffold0012 (5-212)||(247366-247575)
scaffold0012 (180-212)||(34075-34107)
[»] scaffold0162 (2 HSPs)
scaffold0162 (8-212)||(26340-26545)
scaffold0162 (5-138)||(8180-8313)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-212)||(12239-12450)
[»] scaffold0498 (1 HSPs)
scaffold0498 (5-212)||(9008-9215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-212)||(272151-272362)
[»] scaffold0028 (3 HSPs)
scaffold0028 (5-212)||(89378-89587)
scaffold0028 (87-212)||(107708-107835)
scaffold0028 (180-211)||(130880-130911)
[»] scaffold0218 (1 HSPs)
scaffold0218 (5-202)||(4996-5194)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-212)||(123087-123297)
[»] scaffold1711 (1 HSPs)
scaffold1711 (5-126)||(1304-1425)
[»] scaffold0025 (3 HSPs)
scaffold0025 (5-212)||(8979-9192)
scaffold0025 (112-212)||(146838-146938)
scaffold0025 (5-164)||(148851-149012)
[»] scaffold0772 (2 HSPs)
scaffold0772 (5-131)||(5659-5785)
scaffold0772 (180-212)||(5846-5878)
[»] scaffold0049 (2 HSPs)
scaffold0049 (5-131)||(48317-48443)
scaffold0049 (181-252)||(20493-20564)
[»] scaffold0132 (3 HSPs)
scaffold0132 (5-138)||(13636-13769)
scaffold0132 (180-252)||(42677-42746)
scaffold0132 (180-212)||(13824-13856)
[»] scaffold1542 (1 HSPs)
scaffold1542 (8-138)||(534-664)
[»] scaffold0026 (3 HSPs)
scaffold0026 (5-131)||(107877-108003)
scaffold0026 (5-122)||(64527-64649)
scaffold0026 (81-123)||(89863-89905)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-101)||(43124-43224)
[»] scaffold0125 (2 HSPs)
scaffold0125 (7-138)||(41780-41911)
scaffold0125 (172-212)||(41957-41997)
[»] scaffold0141 (4 HSPs)
scaffold0141 (1-138)||(26921-27058)
scaffold0141 (1-131)||(22666-22796)
scaffold0141 (180-212)||(22857-22889)
scaffold0141 (180-212)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-138)||(1582-1719)
scaffold0124 (180-212)||(1496-1528)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-138)||(37066-37203)
scaffold0078 (180-252)||(41632-41704)
scaffold0078 (180-212)||(36980-37012)
[»] scaffold0075 (1 HSPs)
scaffold0075 (40-138)||(34460-34558)
[»] scaffold0420 (1 HSPs)
scaffold0420 (5-126)||(13325-13446)
[»] scaffold0215 (2 HSPs)
scaffold0215 (5-101)||(9374-9470)
scaffold0215 (5-101)||(16272-16368)
[»] scaffold0116 (2 HSPs)
scaffold0116 (5-122)||(166-283)
scaffold0116 (180-245)||(30417-30482)
[»] scaffold0139 (2 HSPs)
scaffold0139 (5-101)||(14086-14182)
scaffold0139 (9-127)||(21115-21233)
[»] scaffold0529 (1 HSPs)
scaffold0529 (5-127)||(3093-3215)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-88)||(5254-5335)
[»] scaffold0034 (1 HSPs)
scaffold0034 (180-252)||(80187-80259)
[»] scaffold0016 (3 HSPs)
scaffold0016 (179-252)||(162038-162111)
scaffold0016 (179-252)||(166124-166197)
scaffold0016 (180-252)||(116411-116483)
[»] scaffold0686 (2 HSPs)
scaffold0686 (180-252)||(5737-5809)
scaffold0686 (180-252)||(5943-6015)
[»] scaffold0184 (1 HSPs)
scaffold0184 (180-252)||(31140-31212)
[»] scaffold0361 (1 HSPs)
scaffold0361 (45-138)||(3360-3453)
[»] scaffold0369 (1 HSPs)
scaffold0369 (7-88)||(3854-3936)
[»] scaffold0342 (1 HSPs)
scaffold0342 (179-252)||(312-385)
[»] scaffold1164 (1 HSPs)
scaffold1164 (181-252)||(1701-1772)
[»] scaffold0122 (2 HSPs)
scaffold0122 (181-252)||(19810-19881)
scaffold0122 (181-252)||(24114-24185)
[»] scaffold0876 (1 HSPs)
scaffold0876 (181-251)||(94-164)
[»] scaffold0084 (1 HSPs)
scaffold0084 (42-131)||(56106-56195)
[»] scaffold0310 (2 HSPs)
scaffold0310 (181-252)||(6264-6335)
scaffold0310 (181-218)||(4-41)
[»] scaffold0123 (1 HSPs)
scaffold0123 (40-122)||(8174-8257)
[»] scaffold0243 (1 HSPs)
scaffold0243 (40-121)||(2317-2399)
[»] scaffold0004 (1 HSPs)
scaffold0004 (180-213)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (180-212)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (180-212)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (180-212)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (180-212)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (180-212)||(57392-57424)
scaffold0058 (81-122)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (180-212)||(55904-55936)
scaffold0032 (180-212)||(108075-108107)
[»] scaffold0207 (1 HSPs)
scaffold0207 (169-212)||(18015-18058)
[»] scaffold0066 (2 HSPs)
scaffold0066 (42-88)||(45198-45244)
scaffold0066 (180-212)||(45338-45370)
[»] scaffold0507 (1 HSPs)
scaffold0507 (180-245)||(1371-1436)
[»] scaffold0456 (2 HSPs)
scaffold0456 (81-122)||(1546-1587)
scaffold0456 (81-122)||(8691-8732)
[»] scaffold0589 (1 HSPs)
scaffold0589 (81-121)||(8011-8051)
[»] scaffold0367 (1 HSPs)
scaffold0367 (180-212)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (180-212)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (180-212)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (180-212)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (180-212)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (180-212)||(34308-34340)
[»] scaffold0092 (1 HSPs)
scaffold0092 (81-121)||(3525-3565)
[»] scaffold0039 (1 HSPs)
scaffold0039 (180-212)||(12418-12450)
[»] scaffold0013 (1 HSPs)
scaffold0013 (196-252)||(35816-35872)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 41394352 - 41394609
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||| |||||||||||| |||||| || |||||||| ||||||||||||||| || ||    
T  41394352 agcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatca 41394451  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394452 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 41394551  T
Q  205 ttaccttaattatctccaactactagctctaacttcactttggctcctttgtttctcc 262  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||| || ||||||    
T  41394552 ttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20931471 - 20931682
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| |    
T  20931471 atttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatc 20931570  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 200  Q
    | || |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||    
T  20931571 atcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaac 20931670  T
Q  201 ccccttacctta 212  Q
    ||||||||||||    
T  20931671 ccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 20913160 - 20913367
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  20913160 agcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 20913259  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||    
T  20913260 cagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaaccccc 20913359  T
Q  205 ttacctta 212  Q
    ||||||||    
T  20913360 ttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 40 - 212
Target Start/End: Complemental strand, 37844548 - 37844374
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccata 139  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||     
T  37844548 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccatt 37844449  T
Q  140 at--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 212  Q
    ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37844448 atgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 20893759 - 20893551
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||| || ||    
T  20893759 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 20893660  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  20893659 cagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaagactaaccc 20893561  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  20893560 ccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 20445809 - 20446019
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||  ||||||||||| | | ||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  20445809 agcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 20445908  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacc 201  Q
     | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  20445909 caattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaact 20446008  T
Q  202 cccttacctta 212  Q
    |||||||||||    
T  20446009 cccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 20531574 - 20531783
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||  ||||||||||| | | ||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||  | ||    
T  20531574 agcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatca 20531673  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       
T  20531674 catttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaattt 20531773  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  20531774 ccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 5072509 - 5072388
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  5072509 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatca 5072410  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  5072409 cagcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 18601239 - 18601118
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  18601239 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 18601140  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||| ||||||||||    
T  18601139 cagcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 45051553 - 45051759
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||| ||    
T  45051553 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatca 45051652  T
Q  105 tagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 203  Q
     |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||    
T  45051653 cagtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaacccc 45051749  T
Q  204 cttaccttaa 213  Q
    ||||||||||    
T  45051750 cttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 51452618 - 51452755
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  51452618 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 51452717  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || ||||| |||||||||||||||||||| ||||||    
T  51452718 atcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 2116385 - 2116506
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    ||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  2116385 agcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 2116484  T
Q  105 tagttggagcacgaatttagca 126  Q
     |||   ||||||||| |||||    
T  2116485 cagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 22227941 - 22228146
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||| || |||||||||||||| |  || |||||| || |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  107 gttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 205  Q
    |   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||    
T  22228041 gcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccct 22228140  T
Q  206 tacctt 211  Q
    ||||||    
T  22228141 tacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 22232638 - 22232843
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||| || |||||||||||||| |  || |||||| || |    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22232737  T
Q  107 gttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 205  Q
    |   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||    
T  22232738 gcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccct 22232837  T
Q  206 tacctt 211  Q
    ||||||    
T  22232838 tacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 21860334 - 21860406
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 21860406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 44034903 - 44034831
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 44034831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 41218728 - 41218800
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 41218800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 27675086 - 27675190
Alignment:
Q  146 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 245  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | | |||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  246 ggctcct 252  Q
     ||||||    
T  27675184 agctcct 27675190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 13376768 - 13376712
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||| ||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctcct 13376712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  180 atgattatgataaagactaacccccttacctt 211  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 16646118 - 16646158
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  16646118 ttcatgcattcaaacataacatcataattggagcacgaatt 16646158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 16744252 - 16743991
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||  ||  ||||||||||| ||||||||||| |    
T  16744252 attttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatc 16744153  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 200  Q
    | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16744152 atcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaac 16744053  T
Q  201 ccccttaccttaattatctccaactactagctctaacttcactttggctcctttgtttctcc 262  Q
    | | |||||||||||||||||||||| |||||||| ||||||||| |||||| || ||||||    
T  16744052 ctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 13839024 - 13839232
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| ||||||||||||||||||| |||| |||||| || |||||||||||||||||||||||| || ||    
T  13839024 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatca 13839123  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccc 203  Q
     |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  13839124 cagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccc 13839223  T
Q  204 cttacctta 212  Q
    |||||||||    
T  13839224 cttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 14842694 - 14842487
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| || || |||||||| ||||||||||||||| |||||| || | |||||||||||||||||||||| || ||    
T  14842694 agcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatca 14842595  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  14842594 cagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaaccccc 14842495  T
Q  205 ttacctta 212  Q
    ||||||||    
T  14842494 ttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 2049940 - 2050147
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| || ||||||| ||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||| ||||||||||||| |  ||    
T  2049940 agcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtca 2050039  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  2050040 cagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccc 2050139  T
Q  205 ttacctta 212  Q
    ||||||||    
T  2050140 ttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 12030280 - 12030073
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||  |||| ||||||||| |||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  12030280 agcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 12030181  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || ||||||||    
T  12030180 cagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaaccccc 12030081  T
Q  205 ttacctta 212  Q
    ||||||||    
T  12030080 ttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 252
Target Start/End: Original strand, 19231981 - 19232161
Alignment:
Q  75 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-aca 171  Q
    |||||||||||| ||| ||||||| || || |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  19231981 catcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 19232080  T
Q  172 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  19232081 aaatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 19232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 51158151 - 51158008
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  51158151 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 51158052  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaatt 148  Q
     |||||||||||||||||||||||||| |||||||| |||||||    
T  51158051 cagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 15859157 - 15858986
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  15859157 agcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 15859058  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 175  Q
     |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859057 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 55316350 - 55316471
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  55316350 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 55316449  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  55316450 cagcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 41270206 - 41270327
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  41270206 agcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 41270305  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  41270306 cagcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  92 aaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 191  Q
    ||||||| || |||| || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  192 aagactaacccccttacctta 212  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17912619 - 17912483
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||||||||||||| |||||| || |||||||||||||||||||||||| |    
T  17912619 attttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatc 17912520  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  17912519 atca-agttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 15936760 - 15936634
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  |    
T  15936760 agcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatta 15936661  T
Q  105 tagttggagcacgaatttagcaacaat 131  Q
     ||||||||||||||||||| ||||||    
T  15936660 cagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2449375 - 2449238
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  2449375 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 2449276  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  2449275 atcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 13975854 - 13975722
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| | ||| | ||||||||||| |||||||||| ||||||  | || |||||||||||||| |||||| || ||    
T  13975854 agcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatca 13975756  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||||||||||||||||||||||||| ||||||    
T  13975755 aagttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 45860936 - 45861068
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| | ||| | ||||||||||| |||||||||| ||||||  | || |||||||||||||| |||||| || ||    
T  45860936 agcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatca 45861034  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||||||||||||||||||||||||| ||||||    
T  45861035 aagttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 15614964 - 15615170
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    ||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| |||||| ||    
T  15614964 agcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacacca 15615063  T
Q  105 tagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 203  Q
     |||  |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||    
T  15615064 cagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccc 15615160  T
Q  204 cttaccttaa 213  Q
    ||||||||||    
T  15615161 cttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 15938602 - 15938476
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| || || |||||||||||||||||||||||| |||||| || ||||||||||||  |||||||||| ||  |    
T  15938602 agcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcatta 15938503  T
Q  105 tagttggagcacgaatttagcaacaat 131  Q
     |||||||||||| |||||| ||||||    
T  15938502 cagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 13955022 - 13954890
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||| ||||||||| | ||| | ||||||||||| |||||||||| ||||||  | || |||||||||||||| |||||| || ||    
T  13955022 agcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatca 13954924  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||||||||||||||||||||||||| ||||||    
T  13954923 aagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16821266 - 16821366
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||  ||||| |||| ||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||| |||||||||||||||||    
T  16821266 atttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataac 16821365  T
Q  101 a 101  Q
    |    
T  16821366 a 16821366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 3992873 - 3992945
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 3992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 55513193 - 55513265
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 55513265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 15857198 - 15857123
Alignment:
Q  177 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcct 15857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 2844514 - 2844586
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcct 2844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 17955916 - 17955861
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctcta 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctcta 17955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 54038056 - 54037984
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 54037984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 7854305 - 7854377
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 7854377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  180 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctaacttca 241  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 11986262 - 11986173
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 131  Q
    |||||||||||||| | ||||| |||||| || ||| || ||||||| || || |||||| || |||| ||||||||||||| |||||||    
T  11986262 aacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 4145898 - 4145814
Alignment:
Q  38 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||| ||||||  || ||| || || ||||||||| || |||||||| || |||| |||||| ||||||||    
T  4145898 tatgaacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatcaccataattggagtacgaattt 4145814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 17191879 - 17191935
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||| ||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctcct 17191935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 30207380 - 30207462
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| | ||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  30207380 tgaacatgaagtttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 30207462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 6228710 - 6228625
Alignment:
Q  38 tatgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||||||||||  || ||| || || ||| |||||| || |||||||| || |||| || ||||||||||||    
T  6228710 tatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcaccataattagagcacgaattt 6228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 14059254 - 14059214
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  14059254 ttcatgcattcaaacataacatcataattggagcacgaatt 14059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 17205019 - 17205075
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 17205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 38810941 - 38810869
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | | ||||||||| ||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctcct 38810869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 20627446 - 20627198
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| || ||||||||||| ||||| || ||||||||||||||||||||| |||||| || ||||||||| |||||||||||||| || ||    
T  20627446 agcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatca 20627347  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaagactaacccc 203  Q
     |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20627346 cagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaacccc 20627247  T
Q  204 cttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
     |||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  20627246 gttaccttaattatctccaactattagctctagcttcacttttgctcct 20627198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 212
Target Start/End: Original strand, 462870 - 463075
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||| || || |    
T  462870 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcaca 462969  T
Q  107 gttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 206  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  462970 gttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 463069  T
Q  207 acctta 212  Q
    ||||||    
T  463070 acctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 43643090 - 43642841
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||| ||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  43643090 agcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 43642991  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  43642990 caattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacct 43642891  T
Q  203 ccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||| ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  43642890 ccttcccttaattatctccaactattagctctagcttcacttttgctcct 43642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 19794837 - 19794591
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| || ||    
T  19794837 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 19794738  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  19794737 cagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatgattatgatgaagactaaccc 19794639  T
Q  203 ccttaccttaattatctccaactactagctctaacttcactttggctc 250  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  19794638 ccttaccttaattatctccaactattagctctagcttcacttttgctc 19794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 36982574 - 36982364
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| ||||  ||||| || |||||||||||| ||||||||||| || ||    
T  36982574 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatca 36982475  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacc 201  Q
     |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36982474 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacc 36982375  T
Q  202 cccttacctta 212  Q
    |||||||||||    
T  36982374 cccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 8891372 - 8891581
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| ||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||||  | ||    
T  8891372 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatca 8891471  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8891472 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 8891571  T
Q  203 ccttacctta 212  Q
    | ||||||||    
T  8891572 ctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 19886785 - 19886661
Alignment:
Q  2 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19886785 tttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 19886686  T
Q  102 acatagttggagcacgaatttagca 126  Q
     || ||   ||||||||||||||||    
T  19886685 tcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 24341522 - 24341309
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  ||||||| |||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  24341522 agcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 24341423  T
Q  105 tagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagacta 198  Q
     ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||    
T  24341422 cagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagacta 24341323  T
Q  199 acccccttacctta 212  Q
    ||||||||||||||    
T  24341322 acccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 25265523 - 25265390
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  25265523 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 25265424  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| ||||||||||||||||||||| ||||||    
T  25265423 aagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 19689538 - 19689401
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  19689538 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 19689439  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  19689438 atcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 23820197 - 23820334
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  23820197 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 23820296  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  23820297 atcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  116 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 14906577 - 14906440
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  14906577 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 14906478  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  14906477 atcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 17396785 - 17396653
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| | ||| | |||||||||||||||||||||| ||||||  | || |||||||||||||| |||||| || ||    
T  17396785 agcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatca 17396687  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||||||||||||||||||||||||| ||||||    
T  17396686 aagttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 22284278 - 22284350
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 22284350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20015137 - 20015274
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| | |||| ||  |||||||||||||| |||||||| |    
T  20015137 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatc 20015236  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  20015237 atcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 22275045 - 22275117
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 22275117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 7507975 - 7507894
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 88  Q
    |||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 15633538 - 15633609
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||| ||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcct 15633609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 68156 - 68238
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  68156 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaa 213  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  180 atgattatgataaagactaacccccttacctt 211  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 22775288 - 22775206
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| | ||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  22775288 tgaacatgaagtttcaccaacaacaattcaattaccaacaacttcatgcattcaaacataacatcataattggagcacgaatt 22775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 22780666 - 22780584
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| | ||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  22780666 tgaacatgaagtttcaccaacaacaattcaattaccaacaacttcatgcattcaaacataacatcataattggagcacgaatt 22780584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 19666848 - 19666920
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | ||||||||||| ||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctcct 19666920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 31146138 - 31146073
Alignment:
Q  146 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 212  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  |||||||||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttacctta 31146073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 43646059 - 43646139
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||| ||||||||||||||  || ||| || || ||| ||||||||| |||||||| ||||||| || |||||||||||    
T  43646059 aacatgaaatttcaccaacaacaatccaattatcaacaacttcatgcattcaaacatatcaacataattagagcacgaatt 43646139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 43646232 - 43646288
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 43646288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 156; Significance: 6e-83; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 48728 - 48935
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  48728 agcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 48827  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48828 cagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 48927  T
Q  205 ttacctta 212  Q
    ||||||||    
T  48928 ttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36220 - 36320
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  36220 atttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataac 36319  T
Q  101 a 101  Q
    |    
T  36320 a 36320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 3715 - 3508
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  3715 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 3616  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  3615 cagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaaccccc 3516  T
Q  205 ttacctta 212  Q
    ||||||||    
T  3515 ttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 1254 - 1462
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||  |||||||||||||||| |||||| || ||    
T  1254 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatca 1353  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccc 203  Q
     |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1354 aagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccc 1453  T
Q  204 cttacctta 212  Q
    |||||||||    
T  1454 cttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 16193849 - 16193643
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||| |||||||| |||||| || |||||||||||||||||||||||| || ||    
T  16193849 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 16193750  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  16193749 tagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-cccc 16193651  T
Q  205 ttacctta 212  Q
    ||||||||    
T  16193650 ttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 16405108 - 16404860
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||| ||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  16405108 agcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 16405009  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  16405008 cagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaaccc 16404910  T
Q  203 ccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  16404909 ccttaccttaattatctccaactattagctctagcttcacttttgctcct 16404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 24928924 - 24928716
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||  | ||    
T  24928924 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatca 24928825  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccc 203  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  24928824 cagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaacccc 24928725  T
Q  204 cttacctta 212  Q
     ||||||||    
T  24928724 attacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 43373601 - 43373392
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| ||| || || ||||||||||||||||||||| || || ||    
T  43373601 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatca 43373502  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  43373501 cagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccc 43373402  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  43373401 ccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 30120853 - 30120974
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||    
T  30120853 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatca 30120952  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  30120953 cagcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 16674513 - 16674392
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||    
T  16674513 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatca 16674414  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  16674413 cagaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 5238213 - 5238350
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  5238213 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 5238312  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  5238313 atcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 6774379 - 6774258
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  6774379 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 6774280  T
Q  105 tagttggagcacgaatttagca 126  Q
     |||  |||||||||| |||||    
T  6774279 cagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22907351 - 22907214
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  22907351 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 22907252  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  22907251 atcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 24661385 - 24661248
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  24661385 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 24661286  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  24661285 atcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 43685672 - 43685809
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  43685672 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 43685771  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  43685772 atcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 17345699 - 17345832
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||  ||||||| ||||  ||||||||| |||||||||||||| |||||| || |||||||||||||||| |||||||||| ||    
T  17345699 agcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatca 17345798  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| |||||||||||| |||||||| ||||||    
T  17345799 cagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 24549112 - 24549233
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    ||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  24549112 agcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 24549211  T
Q  105 tagttggagcacgaatttagca 126  Q
     |||  |||||||||| |||||    
T  24549212 cagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 21844693 - 21844576
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| ||    
T  21844693 agcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21844594  T
Q  105 tagttggagcacgaattt 122  Q
     ||   ||||||||||||    
T  21844593 cagcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 222816 - 222753
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  222816 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 736439 - 736376
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  736439 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 736376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 860334 - 860271
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  860334 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 860271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 691970 - 691908
Alignment:
Q  2 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  691970 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 691908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 21852086 - 21851969
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| ||||| | ||||| |||||||||||||||| ||||||  | ||||||||||||||||||||||||||| ||    
T  21852086 agcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21851987  T
Q  105 tagttggagcacgaattt 122  Q
     ||   ||||||||||||    
T  21851986 cagcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 274766 - 274838
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 274838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 641083 - 641011
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 641011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 826889 - 826817
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 24716794 - 24716722
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcct 24716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 39115598 - 39115670
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| | ||||||||| ||||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcct 39115670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 26011658 - 26011741
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||||||||  || ||| || || ||| ||||||||| |||||||| || |||| || ||||||||||||    
T  26011658 tgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 3060096 - 3060343
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||| ||| |||| || ||||||||||| ||||| |||||||||||||||||||||| |  ||||| || |||||||| ||||||||||| |||  | ||    
T  3060096 agcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatca 3060195  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3060196 cagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttaccccc 3060295  T
Q  205 ttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||| |||||||||||||| |||||||| ||||||||| ||||||    
T  3060296 ttaccttcattatctccaactattagctctagcttcacttttgctcct 3060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 16211896 - 16212103
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||| |||||||| ||||||  ||||| || |||||||||||||||||||||||| || ||    
T  16211896 agcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 16211995  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  16211996 cagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccc 16212095  T
Q  205 ttacctta 212  Q
    ||||||||    
T  16212096 ttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 13037147 - 13036938
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||| ||||||| ||||||| |||||| || |||||||||||||||||||||||| || ||    
T  13037147 agcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 13037048  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13037047 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaaccc 13036948  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  13036947 ccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 11580872 - 11580661
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||  | ||    
T  11580872 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatca 11580773  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaac 200  Q
     |||||||||||||||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  11580772 cagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaat 11580673  T
Q  201 ccccttacctta 212  Q
    ||||||||||||    
T  11580672 ccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 36052794 - 36053003
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||| ||||||||| ||| || || ||||||||||||||||||||| || || ||    
T  36052794 agcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatca 36052893  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  36052894 cagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccc 36052993  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  36052994 ccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 10989540 - 10989661
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  10989540 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 10989639  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  10989640 cagcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  107 gttggagcacgaatttagcaa 127  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 47481162 - 47481031
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| |||| |||||||||||||| ||||| ||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||| || |    
T  47481162 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 47481063  T
Q  107 gttggagcacgaatttagcaacaatcatccat 138  Q
    ||| ||||||||||||||||||||| ||||||    
T  47481062 gttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 13911145 - 13911024
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||    
T  13911145 agcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatca 13911046  T
Q  105 tagttggagcacgaatttagca 126  Q
     |    ||||||||||||||||    
T  13911045 caacaagagcacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 18253968 - 18253842
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  |    
T  18253968 agcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatta 18253869  T
Q  105 tagttggagcacgaatttagcaacaat 131  Q
     ||||||||||||||||||| ||||||    
T  18253868 cagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11516353 - 11516490
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  11516353 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 11516452  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  11516453 atcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15441701 - 15441564
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  15441701 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 15441602  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  15441601 atcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30262266 - 30262129
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  30262266 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 30262167  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  30262166 atcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7293142 - 7293279
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  || |||||||||||||||||||| |    
T  7293142 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatc 7293241  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  7293242 atcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 16479083 - 16478987
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  16479083 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 16478987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 13321183 - 13321278
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca 137  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| |||||    
T  13321183 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 25292471 - 25292338
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||| |||||| ||||| ||||| | |||||||||||||||||||||| ||||||  | || |||||||| |||||||||||| || ||    
T  25292471 agcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatca 25292372  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     ||||||||||| |||||||||||||| ||||||    
T  25292371 aagttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 13572807 - 13572924
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||    
T  13572807 agcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatca 13572906  T
Q  105 tagttggagcacgaattt 122  Q
     ||   ||||||||||||    
T  13572907 cagcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 126738 - 126810
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcct 126810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 32493978 - 32493906
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 32493906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 296087 - 295893
Alignment:
Q  17 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcac 116  Q
    ||||||| |||||||| ||||  | |||||| ||||||||||||||| |||  | || |||| ||||||||| |||||||||||| |  | || || |||    
T  296087 ataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacac 295988  T
Q  117 gaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 210  Q
    ||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| |||||||||||||    
T  295987 gaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 1936949 - 1936884
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 245  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||| |||||||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttt 1936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 111201 - 111129
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| | ||||||||| ||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcct 111129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  106 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 199  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  200 -cccccttacctta 212  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 7283987 - 7283916
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| | ||||||||| ||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcct 7283916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 13377819 - 13377923
Alignment:
Q  146 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 245  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | | |||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  246 ggctcct 252  Q
     ||||||    
T  13377917 agctcct 13377923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 13377693 - 13377775
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  13377693 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  143 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 16915011 - 16914928
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaatt-catgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||| ||||||||||||||  || ||| || |||||||| ||||||| |||||||| || |||| || ||||||||||||    
T  16915011 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 13389693 - 13389749
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 13389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 14114021 - 14113989
Alignment:
Q  106 agttggagcacgaatttagcaacaatcatccat 138  Q
    |||||||||||||||||||||||||| ||||||    
T  14114021 agttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 14423671 - 14423639
Alignment:
Q  106 agttggagcacgaatttagcaacaatcatccat 138  Q
    |||||||||||||||||||||||||| ||||||    
T  14423671 agttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 208
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  180 atgattatgataaagactaacccccttac 208  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 122019 - 122226
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  122019 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 122118  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  122119 cagttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccc 122218  T
Q  205 ttacctta 212  Q
    ||||||||    
T  122219 ttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 54118377 - 54118130
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| ||||||||| || | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  54118377 agcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 54118278  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  54118277 caattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaaccc 54118178  T
Q  203 ccttaccttaattatctccaactactagctctaacttcactttggctc 250  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  54118177 ccttaccttaattatctccaactattagctctagcttcacttttgctc 54118130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 13246560 - 13246769
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || ||| |||||||||||||||||||| || ||    
T  13246560 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatca 13246659  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246660 cagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 13246759  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  13246760 ccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 15675222 - 15675009
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  15675222 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 15675123  T
Q  105 tagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagacta 198  Q
     |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||    
T  15675122 cagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagacta 15675023  T
Q  199 acccccttacctta 212  Q
    ||||||||||||||    
T  15675022 acccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47357781 - 47357906
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47357781 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataac 47357880  T
Q  101 aacatagttggagcacgaatttagca 126  Q
    | || ||   ||||||||||||||||    
T  47357881 atcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 10104383 - 10104170
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  10104383 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 10104284  T
Q  105 tagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagacta 198  Q
     |||||||||||| ||||||||||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||    
T  10104283 cagttggagcacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagacta 10104184  T
Q  199 acccccttacctta 212  Q
    ||||||||||||||    
T  10104183 acccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 26680326 - 26680463
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  26680326 attttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 26680425  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  26680426 atcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 75 - 212
Target Start/End: Original strand, 33240900 - 33241043
Alignment:
Q  75 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 172  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  33240900 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 33240999  T
Q  173 a----atgatgatgattatgataaagactaacccccttacctta 212  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  33241000 aaatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10488688 - 10488825
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  10488688 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 10488787  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  10488788 atcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16328063 - 16327926
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  16328063 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 16327964  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  16327963 atcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10644346 - 10644467
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||    
T  10644346 atttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataac 10644445  T
Q  101 aacatagttggagcacgaattt 122  Q
    | || ||   ||||||||||||    
T  10644446 atcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 13048354 - 13048221
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||||| ||||| ||||| | |||||||||||||||||||||| ||||||  | |||||| ||||||||||||||||| ||       
T  13048354 agcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattg 13048255  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||||||||| ||||||||||||||| ||||||    
T  13048254 aagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 25119139 - 25119067
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcct 25119067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  106 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 199  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  200 cccccttacctta 212  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 31115795 - 31115865
Alignment:
Q  41 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttgg 111  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || ||||||    
T  31115795 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 40885652 - 40885570
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||||||||  || ||| || || ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885652 tgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 5682460 - 5682388
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||   ||||||||| ||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcct 5682388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 15044992 - 15045074
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  15044992 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 15109432 - 15109350
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| |||||||| |||||    
T  15109432 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcatgaatt 15109350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 41165881 - 41165809
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | | ||||||||| ||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctcct 41165809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 41859 - 42066
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| || ||||||||||| ||||| ||| ||||||||||||||||||||   |||| || |||||||||||||||||||||||| || ||    
T  41859 agcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatca 41958  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41959 cagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaaccccc 42058  T
Q  205 ttacctta 212  Q
    ||||||||    
T  42059 ttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 172031 - 172242
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||| |||| |||||||||||| | | ||| ||||||||||||||||||| |||| |||||| || ||||||||||| |||||||||||| |    
T  172031 atttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatc 172130  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 200  Q
    | || |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172131 atcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 172230  T
Q  201 ccccttacctta 212  Q
    ||||||||||||    
T  172231 ccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 177734 - 177945
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||| |||| |||||||||||| | | ||| ||||||||||||||||||| |||| |||||| || ||||||||||| |||||||||||| |    
T  177734 atttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatc 177833  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 200  Q
    | || |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177834 atcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 177933  T
Q  201 ccccttacctta 212  Q
    ||||||||||||    
T  177934 ccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 210
Target Start/End: Complemental strand, 51315 - 51110
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| | ||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||| || ||    
T  51315 agcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatca 51216  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  51215 cagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcc 51116  T
Q  205 ttacct 210  Q
    ||||||    
T  51115 ttacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 1089 - 882
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| ||||||| |||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  1089 agcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 990  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| ||||||||||||||||||||||||||    
T  989 cagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaaccccc 890  T
Q  205 ttacctta 212  Q
    ||||||||    
T  889 ttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 5e-71; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 23507095 - 23507302
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  23507095 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 23507194  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||    
T  23507195 caaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaaccccc 23507294  T
Q  205 ttacctta 212  Q
    ||||||||    
T  23507295 ttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 27182680 - 27182471
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||| ||||||| |||||| || ||||| |||||||||||||||||| || ||    
T  27182680 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatca 27182581  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27182580 cagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaaccc 27182481  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  27182480 ccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22366606 - 22366481
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22366606 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 22366507  T
Q  101 aacatagttggagcacgaatttagca 126  Q
    | || ||   ||||||||||||||||    
T  22366506 atcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 19500027 - 19500151
Alignment:
Q  2 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19500027 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 19500126  T
Q  102 acatagttggagcacgaatttagca 126  Q
     || ||   ||||||||||||||||    
T  19500127 tcacagcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 25426756 - 25426880
Alignment:
Q  2 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25426756 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 25426855  T
Q  102 acatagttggagcacgaatttagca 126  Q
     || ||   ||||||||||||||||    
T  25426856 tcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18778117 - 18777995
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18778117 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 18778018  T
Q  101 aacatagttggagcacgaattta 123  Q
    | || ||   |||||||||||||    
T  18778017 atcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 22053966 - 22053753
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| || ||    
T  22053966 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatca 22053867  T
Q  105 tagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagacta 198  Q
     |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||    
T  22053866 cagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagacta 22053767  T
Q  199 acccccttacctta 212  Q
    ||||||||||||||    
T  22053766 acccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 12502 - 12626
Alignment:
Q  2 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12502 tttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 12601  T
Q  102 acatagttggagcacgaatttagca 126  Q
     || ||   ||||||||||||||||    
T  12602 tcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 212
Target Start/End: Complemental strand, 18531198 - 18530988
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |    
T  18531198 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaca 18531099  T
Q  107 gttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacc 201  Q
    ||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| ||||||||||    
T  18531098 gttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacc 18530999  T
Q  202 cccttacctta 212  Q
    |||||||||||    
T  18530998 cccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 21073719 - 21073595
Alignment:
Q  2 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21073719 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataaca 21073620  T
Q  102 acatagttggagcacgaatttagca 126  Q
     || ||   ||||||||||||||||    
T  21073619 tcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 43443516 - 43443398
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  43443516 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 43443417  T
Q  105 tagttggagcacgaattta 123  Q
     ||   |||||||||||||    
T  43443416 cagcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 4200110 - 4199985
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4200110 atttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataac 4200011  T
Q  101 aacatagttggagcacgaatttagca 126  Q
    | || |    ||||||||||||||||    
T  4200010 atcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20623095 - 20623232
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  20623095 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 20623194  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  20623195 atcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21233665 - 21233528
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  21233665 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 21233566  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  21233565 atcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 34939407 - 34939540
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||  ||||||| ||||  ||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  34939407 agcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 34939506  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| ||||||||||||||||||| | ||||||    
T  34939507 cagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 29188405 - 29188284
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    ||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  29188405 agcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 29188306  T
Q  105 tagttggagcacgaatttagca 126  Q
     |||  |||||||||| |||||    
T  29188305 cagtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 25900543 - 25900408
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   ||||| |||||| ||||||||| |||||| || |||||||||||||||||||||||| |    
T  25900543 attttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatc 25900444  T
Q  101 aacatagttggagcacgaatttagcaacaatcatcc 136  Q
    | || |||||||||||||||||||||||||| ||||    
T  25900443 atcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16536323 - 16536460
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  || |||||||||||||||||||| |    
T  16536323 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatc 16536422  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  16536423 atcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 37052870 - 37053007
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| ||||||   |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  37052870 attttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 37052969  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  37052970 atcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  8 acaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatag 107  Q
    ||||| ||||||||||||||||||| ||||| | |||||||||||||||||||| | ||||||  | ||||||||||||||||||||||||||| || ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  108 ttggagcacgaattt 122  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 11584374 - 11584445
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 11584445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 29918127 - 29918212
Alignment:
Q  38 tatgaacatgtaatttcaccaacaattatacaactaacatcaatt-catgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||| ||||||||||||||  || ||| || |||||||| |||| || |||||||| || |||| |||||||||||||||    
T  29918127 tatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 32950862 - 32950951
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 131  Q
    |||||||||||||| | ||||| |||||| || |||||| |||| || || || |||||| || |||| ||||||||||||| |||||||    
T  32950862 aacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 21310792 - 21310709
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaatt-catgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||| ||||||||||||||  || ||| || || ||||| ||||||| |||||||| || ||||||| ||||||||||||    
T  21310792 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 5450926 - 5450844
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| |||||||| |||||    
T  5450926 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcatgaatt 5450844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 16595713 - 16595753
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  16595713 ttcatgcattcaaacataacatcataattggagcacgaatt 16595753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 6197 - 5990
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| || | ||||||| |||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  6197 agcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 6098  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  |||||||||||||||||||||||||    
T  6097 cagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaaccccc 5998  T
Q  205 ttacctta 212  Q
    ||||||||    
T  5997 ttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 37050 - 36836
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||   ||||| || |||||||||||||||||||||||| |    
T  37050 atttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatc 36951  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagacta 198  Q
    | || |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  36950 atcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagacta 36851  T
Q  199 acccccttaccttaa 213  Q
    |||||||||||||||    
T  36850 acccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 15398 - 15327
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | | ||||||||| ||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcct 15327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 23153577 - 23153786
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  23153577 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 23153676  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23153677 cagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaaccc 23153776  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  23153777 ccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 14626249 - 14626045
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  107 gttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 206  Q
    |   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  ||||||||||||    
T  14626149 gcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaaccccctt 14626050  T
Q  207 acctt 211  Q
    |||||    
T  14626049 acctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25175690 - 25175815
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25175690 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 25175789  T
Q  101 aacatagttggagcacgaatttagca 126  Q
    |||| ||   ||||||||||||||||    
T  25175790 aacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27654108 - 27653983
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27654108 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataac 27654009  T
Q  101 aacatagttggagcacgaatttagca 126  Q
    | || ||   ||||||||||||||||    
T  27654008 atcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16825879 - 16825752
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatta--tacaactaacatcaattcatgcatacaaacata 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  16825879 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacata 16825780  T
Q  99 acaacatagttggagcacgaatttagca 126  Q
    ||| || ||   ||||||||||||||||    
T  16825779 acatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 1657881 - 1657748
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||  ||||||| ||||  ||||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||||| ||    
T  1657881 agcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatca 1657782  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| ||||||||||||||||||||| ||||||    
T  1657781 cagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 35009572 - 35009439
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||| ||    
T  35009572 agcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatca 35009473  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| ||||||||||||||||||||| ||||||    
T  35009472 cagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 1650226 - 1650020
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| ||||||||||| || ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||| ||    
T  1650226 agcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatca 1650127  T
Q  105 tagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 203  Q
     |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||    
T  1650126 cagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccc 1650030  T
Q  204 cttaccttaa 213  Q
    ||||||||||    
T  1650029 cttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 15862601 - 15862734
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||||||||  ||||| | ||||  ||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  15862601 agcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 15862700  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| |||||||||||||| |||||| ||||||    
T  15862701 cagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  143 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 19983224 - 19983152
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 19983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 35015089 - 35015017
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 35015017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 27751603 - 27751688
Alignment:
Q  53 tcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 138  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||||| || | || ||||||||||||||| ||| | ||||||    
T  27751603 tcaccaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 18583640 - 18583712
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 18583712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 29666041 - 29666137
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 138  Q
    |||||||||||||||| ||||| |||||| || ||||||||||| ||||  || |||||| || || | ||||||||||||| ||||||| ||||||    
T  29666041 aacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 29605612 - 29605696
Alignment:
Q  38 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||||||||||  || ||| || ||  ||||||||||| |||||||| || |||| || ||||||||||||    
T  29605612 tatgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  180 atgattatgataaagactaacccccttacctt 211  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 18629691 - 18629608
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaatt-catgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||| ||||||||||||||  || ||| || |||||||| ||||||| |||||||| || |||| || ||||||||||||    
T  18629691 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  182 gattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 17083282 - 17083200
Alignment:
Q  38 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaat 120  Q
    |||||||||  ||||||||||||||  || ||| || || |||||||||||| |||||||| || |||| || ||||||||||    
T  17083282 tatgaacatacaatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatcataattagagcacgaat 17083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 18399144 - 18399184
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  18399144 ttcatgcattcaaacataacatcataattggagcacgaatt 18399184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 21623506 - 21623562
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 21623562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 19336 - 19543
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  19336 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 19435  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacc 201  Q
     |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19436 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacc 19535  T
Q  202 cccttacc 209  Q
    ||||||||    
T  19536 cccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 21420 - 21553
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  21420 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 21519  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||||||||||||||||||||||||| ||||||    
T  21520 cagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 128302 - 128095
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||| ||  ||| || || ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  128302 agcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 128203  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  128202 cagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaaccccc 128103  T
Q  205 ttacctta 212  Q
    ||||||||    
T  128102 ttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 31796 - 31700
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  31796 agcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataaca 31700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 247575 - 247366
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||| |||||||||  |||| |||||| || |||||||||||||||||||||||| ||  |    
T  247575 agcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcatta 247476  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247475 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 247376  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  247375 ccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 26545 - 26340
Alignment:
Q  8 acaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatag 107  Q
    ||||| |||| |||||||||||||| ||||| |||||||||| ||||||||| |||  ||||| || |||||||||| ||||||||||||| || || ||    
T  26545 acaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaag 26446  T
Q  108 ttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 206  Q
    |||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26445 ttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaaccccctt 26346  T
Q  207 acctta 212  Q
    ||||||    
T  26345 acctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 8313 - 8180
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  ||||| |||||||||||||||||| |||||| || || |||||||||||||||||||||||| ||    
T  8313 agcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatca 8214  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| ||||||||||||||||||||| ||||||    
T  8213 cagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 12239 - 12450
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||| |||| |||||||||||||| || || | |||||||| ||||||||||||| |||||| || |||||||||||||||||||||||| |    
T  12239 atttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatc 12338  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaa 199  Q
    | || |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | |||||||||||||||||||||    
T  12339 atcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaa 12437  T
Q  200 cccccttacctta 212  Q
    |||||||||||||    
T  12438 cccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 9008 - 9215
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||| ||||||| ||||  ||||||||||||||||||||||||  ||||| || |||| |||||||||||||||||||||| ||    
T  9008 agcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatca 9107  T
Q  105 tagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 204  Q
     |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  9108 caaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaaccccc 9207  T
Q  205 ttacctta 212  Q
    ||||||||    
T  9208 ttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 272151 - 272362
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||| |||| |||||||||||| | | ||| ||||||||||||||| ||| |||| |||||| || ||||||||||| |||||||||||| |    
T  272151 atttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatc 272250  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaac 200  Q
    |  | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  272251 attacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaac 272350  T
Q  201 ccccttacctta 212  Q
    ||||||||||||    
T  272351 ccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 119; Significance: 7e-61; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 89587 - 89378
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| ||||||| |||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| || ||    
T  89587 agcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatca 89488  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  89487 cagttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaaccc 89388  T
Q  203 ccttacctta 212  Q
    ||||||||||    
T  89387 ccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 87 - 212
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  87 catacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 184  Q
    |||||||| ||| || || |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  185 tatgataaagactaacccccttacctta 212  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  180 atgattatgataaagactaacccccttacctt 211  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 5194 - 4996
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||| |||||||||||||  ||||| || |||||||||| ||||||||||||| |  ||    
T  5194 agcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtca 5095  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 202  Q
     |||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5094 cagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 123297 - 123087
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  123297 agcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 123198  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacc 201  Q
     | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||||||||| | ||||||||||    
T  123197 caattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacc 123098  T
Q  202 cccttacctta 212  Q
    |||||||||||    
T  123097 cccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 1425 - 1304
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  1425 agcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 1326  T
Q  105 tagttggagcacgaatttagca 126  Q
     ||   ||||||||||||||||    
T  1325 cagcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 8979 - 9192
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||    
T  8979 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 9078  T
Q  105 tagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagacta 198  Q
     || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || ||||    ||||||||||||||||| |||||||    
T  9079 cagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagacta 9178  T
Q  199 acccccttacctta 212  Q
    || | |||||||||    
T  9179 acacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  112 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 211  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  212 a 212  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 148851 - 149012
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || ||    
T  148851 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatca 148950  T
Q  105 tagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 164  Q
     ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148951 cagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 5659 - 5785
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| ||||| ||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| ||    
T  5659 agcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 5758  T
Q  105 tagttggagcacgaatttagcaacaat 131  Q
     ||||||||||||||||||||||||||    
T  5759 aagttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 48317 - 48443
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  |    
T  48317 agcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatta 48416  T
Q  105 tagttggagcacgaatttagcaacaat 131  Q
     ||||||||||||||||||||||||||    
T  48417 cagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 20493 - 20564
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||| ||| ||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 20564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 13636 - 13769
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  13636 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13735  T
Q  105 tagttggagcacgaatttagcaacaatcatccat 138  Q
     |||| ||||||||||||||||||||| ||||||    
T  13736 aagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 42677 - 42746
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||| |||||||| ||||||||| ||||||    
T  42677 atgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttttgctcct 42746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 664 - 534
Alignment:
Q  8 acaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatag 107  Q
    ||||| |||| |||| ||||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || ||    
T  664 acaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacag 565  T
Q  108 ttggagcacgaatttagcaacaatcatccat 138  Q
    |||||||||||||||||||||||| ||||||    
T  564 ttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 107877 - 108003
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| || | ||||||||||||||||| || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  |    
T  107877 agcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatta 107976  T
Q  105 tagttggagcacgaatttagcaacaat 131  Q
     ||||||||||||||||||| ||||||    
T  107977 cagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 64649 - 64527
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatc-----aattcatgcatacaaacataa 99  Q
    |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | ||||     |||||||||||| ||||||||    
T  64649 agcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataa 64550  T
Q  100 caacatagttggagcacgaattt 122  Q
    || || ||   ||||||||||||    
T  64549 catcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaattta 123  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43124 - 43224
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||| |||||||||    
T  43124 atttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataac 43223  T
Q  101 a 101  Q
    |    
T  43224 a 43224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 41780 - 41911
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacata 106  Q
    |||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |    
T  41780 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 41879  T
Q  107 gttggagcacgaatttagcaacaatcatccat 138  Q
    ||| ||||||||||||| ||||||| ||||||    
T  41880 gttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  172 aaatgatgatgattatgataaagactaacccccttacctta 212  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 26921 - 27058
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  26921 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 27020  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  27021 atcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22666 - 22796
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  22666 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 22765  T
Q  101 aacatagttggagcacgaatttagcaacaat 131  Q
    | || ||||||||||||||||||||||||||    
T  22766 atcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

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Target: scaffold0124 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1719 - 1582
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  1719 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 1620  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  1619 atcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37203 - 37066
Alignment:
Q  1 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataac 100  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |    
T  37203 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatc 37104  T
Q  101 aacatagttggagcacgaatttagcaacaatcatccat 138  Q
    | || |||||||||||||||||||||||||| ||||||    
T  37103 atcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 41632 - 41704
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 41704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 40 - 138
Target Start/End: Complemental strand, 34558 - 34460
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 138  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||| ||||||    
T  34558 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 13446 - 13325
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    ||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||    
T  13446 agcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T
Q  105 tagttggagcacgaatttagca 126  Q
     | |  |||||||||| |||||    
T  13346 cactaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 9470 - 9374
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    ||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  9470 agcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 16368 - 16272
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    ||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  16368 agcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 16272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 166 - 283
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| | ||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| ||    
T  166 agcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T
Q  105 tagttggagcacgaattt 122  Q
     ||   ||||||||||||    
T  266 cagcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 30417 - 30482
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 245  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| | |||||||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttt 30482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 14182 - 14086
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 101  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||| ||| || || |||||||||||||||||| ||||||||    
T  14182 agcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataaca 14086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  9 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagt 108  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| || || |||||||| ||| |||||||||||||| || |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  109 tggagcacgaatttagcaa 127  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 3093 - 3215
Alignment:
Q  5 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaaca 104  Q
    |||||||| |||| |||||  ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||| ||    
T  3093 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatca 3192  T
Q  105 tagttggagcacgaatttagcaa 127  Q
     ||   |||||||||||||||||    
T  3193 cagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  7 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 88  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 80187 - 80259
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcct 80259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 162111 - 162038
Alignment:
Q  179 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 162038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 166197 - 166124
Alignment:
Q  179 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 166124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 116483 - 116411
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 116411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 5809 - 5737
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 6015 - 5943
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 31212 - 31140
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 31140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  45 atgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 138  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||||||| ||||| || || | |||||||||||||||| |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  7 cacaatcttcataacttatcatttttg-catatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 88  Q
    |||||| | |||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 385 - 312
Alignment:
Q  179 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcct 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 1701 - 1772
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 19881 - 19810
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 19810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 24185 - 24114
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||| ||| ||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 24114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 94 - 164
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcc 251  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 56195 - 56106
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 131  Q
    |||||||||||||| | ||||| |||||| || |||||| ||||||| || || |||||| || |||| ||||||||||||| |||||||    
T  56195 aacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 6335 - 6264
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| | ||||||||| ||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcct 6264  T

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Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  181 tgattatgataaagactaacccccttaccttaattatc 218  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 8174 - 8257
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaatt-catgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||| || |||||||||||  || ||| || |||||||| |||||||||||||||| || ||||||| ||||||||||||    
T  8174 tgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0243 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 2399 - 2317
Alignment:
Q  40 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  2399 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaa 213  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||| || ||||||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  169 acaaaatgatgatgattatgataaagactaacccccttacctta 212  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 45198 - 45244
Alignment:
Q  42 aacatgtaatttcaccaacaattatacaactaacatcaattcatgca 88  Q
    |||||||||||||||| ||||| |||||| || ||||||||||||||    
T  45198 aacatgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

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Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

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Target: scaffold0507 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 1436 - 1371
Alignment:
Q  180 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 245  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| | |||||||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcacttt 1371  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||| || ||||||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaattt 122  Q
    |||||||||||||||||| || ||||||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 8011 - 8051
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  8011 ttcatgcattcaaacataacatcataattggagcacgaatt 8051  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 3525 - 3565
Alignment:
Q  81 ttcatgcatacaaacataacaacatagttggagcacgaatt 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  3525 ttcatgcattcaaacataacatcataattggagcacgaatt 3565  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  180 atgattatgataaagactaacccccttacctta 212  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 35816 - 35872
Alignment:
Q  196 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 252  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 35872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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