View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2093_low_13 (Length: 237)
Name: NF2093_low_13
Description: NF2093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2093_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 26426146 - 26426357
Alignment:
| Q |
15 |
tgaaaagcaataccgctgcatccaagaaaagaaaaaggacaccttta----gaaaattaataacttgcattatatgaaatt-gggtacgtaatctttcac |
109 |
Q |
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| T |
26426146 |
tgaaaagcaatactgctgcatccaagaaaagaaaaaggacacttttaattagaaaattaataacttgcattatatgaaatttgggtacgtaatctttcac |
26426245 |
T |
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| Q |
110 |
ttccgaccaaaaagaaacatgaaagggaatgttgcagttgaacatgacaaaacgtgattcttgctttgttttcctttaacaatataattagccataaata |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26426246 |
ttccgaccaaaaagaaacatgaaagggaatgttgcagttgaacatgacaaaatgtgattcttgctttgttttcctttaacaatataattagccataaata |
26426345 |
T |
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| Q |
210 |
tggatattaaac |
221 |
Q |
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|||||||||||| |
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| T |
26426346 |
tggatattaaac |
26426357 |
T |
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