View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20942_low_3 (Length: 472)

Name: NF20942_low_3
Description: NF20942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20942_low_3
NF20942_low_3
[»] chr6 (18 HSPs)
chr6 (282-455)||(32756412-32756585)
chr6 (125-251)||(32756255-32756381)
chr6 (1-56)||(3206470-3206525)
chr6 (1-56)||(9706986-9707041)
chr6 (1-56)||(12890791-12890846)
chr6 (1-56)||(28085592-28085647)
chr6 (1-56)||(30789085-30789140)
chr6 (1-56)||(31819047-31819102)
chr6 (1-56)||(32756137-32756192)
chr6 (1-56)||(34934841-34934896)
chr6 (3-56)||(608379-608432)
chr6 (5-56)||(12119653-12119705)
chr6 (1-56)||(1615234-1615289)
chr6 (1-56)||(5258159-5258214)
chr6 (1-56)||(30031472-30031527)
chr6 (1-56)||(34143776-34143831)
chr6 (1-56)||(34156392-34156447)
chr6 (1-55)||(21886320-21886374)
[»] chr8 (25 HSPs)
chr8 (1-56)||(36545365-36545420)
chr8 (1-56)||(11523734-11523789)
chr8 (1-56)||(14742093-14742148)
chr8 (1-55)||(12491150-12491204)
chr8 (1-56)||(15215423-15215478)
chr8 (1-56)||(25473414-25473469)
chr8 (139-198)||(36930931-36930990)
chr8 (1-56)||(44529441-44529496)
chr8 (14-56)||(41031431-41031473)
chr8 (14-56)||(41031537-41031579)
chr8 (1-54)||(36565254-36565307)
chr8 (5-56)||(490555-490606)
chr8 (5-56)||(1928598-1928649)
chr8 (1-56)||(10668508-10668563)
chr8 (5-56)||(30689955-30690006)
chr8 (5-56)||(35323993-35324044)
chr8 (1-56)||(42469738-42469793)
chr8 (1-52)||(42854019-42854070)
chr8 (1-56)||(44047543-44047598)
chr8 (136-198)||(69084-69146)
chr8 (14-56)||(39651039-39651081)
chr8 (14-56)||(45419464-45419506)
chr8 (1-46)||(40813540-40813585)
chr8 (1-37)||(36042414-36042450)
chr8 (15-55)||(36394960-36395000)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-56)||(547-602)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-56)||(28900-28955)
[»] chr7 (38 HSPs)
chr7 (1-56)||(6375084-6375139)
chr7 (1-56)||(11594176-11594231)
chr7 (1-56)||(12841286-12841341)
chr7 (1-56)||(28208339-28208394)
chr7 (1-56)||(31682613-31682668)
chr7 (1-56)||(35906212-35906267)
chr7 (1-56)||(39906383-39906438)
chr7 (2-56)||(7273317-7273371)
chr7 (1-54)||(36652208-36652261)
chr7 (1-54)||(45836495-45836548)
chr7 (1-56)||(29650600-29650655)
chr7 (1-56)||(31869113-31869168)
chr7 (5-56)||(33073149-33073200)
chr7 (1-56)||(34035165-34035220)
chr7 (1-56)||(37618161-37618216)
chr7 (1-56)||(40979939-40979994)
chr7 (1-56)||(43281890-43281945)
chr7 (3-56)||(22349838-22349891)
chr7 (11-56)||(31005431-31005476)
chr7 (3-56)||(31681031-31681084)
chr7 (3-56)||(40630652-40630705)
chr7 (4-56)||(32631783-32631835)
chr7 (1-56)||(2885733-2885788)
chr7 (5-56)||(7220976-7221027)
chr7 (1-56)||(27648996-27649051)
chr7 (5-56)||(28708601-28708652)
chr7 (1-56)||(34869636-34869691)
chr7 (1-56)||(38900173-38900227)
chr7 (1-56)||(43491524-43491579)
chr7 (1-56)||(44855185-44855240)
chr7 (1-56)||(46355867-46355922)
chr7 (1-56)||(48515491-48515546)
chr7 (14-56)||(6263488-6263530)
chr7 (5-55)||(42187661-42187711)
chr7 (2-56)||(48919329-48919383)
chr7 (1-46)||(19119445-19119490)
chr7 (14-55)||(42969927-42969968)
chr7 (1-46)||(49029492-49029537)
[»] chr5 (21 HSPs)
chr5 (1-56)||(2915507-2915562)
chr5 (1-56)||(13561397-13561452)
chr5 (1-56)||(29816598-29816653)
chr5 (1-56)||(30213791-30213846)
chr5 (3-56)||(408505-408558)
chr5 (5-53)||(1275484-1275532)
chr5 (1-56)||(1287590-1287645)
chr5 (1-56)||(3302060-3302115)
chr5 (1-56)||(4496600-4496655)
chr5 (1-56)||(10639518-10639573)
chr5 (1-56)||(12492395-12492450)
chr5 (5-56)||(20456993-20457044)
chr5 (1-56)||(28976870-28976925)
chr5 (5-56)||(38685187-38685238)
chr5 (1-56)||(5558357-5558412)
chr5 (5-56)||(11069173-11069224)
chr5 (3-56)||(2075484-2075537)
chr5 (5-54)||(42272697-42272746)
chr5 (1-56)||(16913893-16913949)
chr5 (5-53)||(27386560-27386608)
chr5 (181-236)||(28499788-28499841)
[»] chr4 (33 HSPs)
chr4 (1-56)||(6957814-6957869)
chr4 (1-56)||(8286655-8286710)
chr4 (1-56)||(19061946-19062001)
chr4 (1-56)||(27450191-27450246)
chr4 (1-56)||(31959825-31959880)
chr4 (1-56)||(33190859-33190914)
chr4 (1-56)||(52569526-52569581)
chr4 (1-55)||(4441069-4441123)
chr4 (1-54)||(49939747-49939800)
chr4 (3-56)||(50238626-50238679)
chr4 (3-56)||(50238712-50238765)
chr4 (1-56)||(436445-436500)
chr4 (1-56)||(12494879-12494934)
chr4 (1-56)||(23906308-23906363)
chr4 (1-56)||(33227425-33227480)
chr4 (1-56)||(48622554-48622609)
chr4 (1-56)||(51811290-51811344)
chr4 (5-56)||(55007966-55008017)
chr4 (1-56)||(56375506-56375561)
chr4 (4-54)||(19969400-19969450)
chr4 (14-56)||(28351788-28351830)
chr4 (1-45)||(32479254-32479298)
chr4 (5-56)||(1777028-1777079)
chr4 (5-56)||(3979140-3979191)
chr4 (1-56)||(7947153-7947208)
chr4 (13-56)||(21528516-21528559)
chr4 (1-56)||(31961277-31961332)
chr4 (5-56)||(48174104-48174155)
chr4 (1-56)||(53708010-53708065)
chr4 (14-56)||(30634117-30634159)
chr4 (14-56)||(50862860-50862902)
chr4 (15-56)||(45209216-45209257)
chr4 (1-37)||(27983409-27983445)
[»] chr3 (27 HSPs)
chr3 (1-56)||(5169048-5169103)
chr3 (1-56)||(12096716-12096771)
chr3 (1-56)||(52139016-52139071)
chr3 (1-56)||(53519796-53519851)
chr3 (15-56)||(53951985-53952026)
chr3 (1-56)||(311320-311375)
chr3 (1-56)||(7895891-7895946)
chr3 (1-56)||(28245653-28245708)
chr3 (1-56)||(31454236-31454291)
chr3 (1-56)||(31566172-31566227)
chr3 (1-56)||(41529977-41530032)
chr3 (1-56)||(47555343-47555398)
chr3 (1-56)||(48508451-48508506)
chr3 (1-56)||(53262357-53262412)
chr3 (2-56)||(45834611-45834665)
chr3 (15-56)||(659755-659796)
chr3 (1-46)||(40273226-40273271)
chr3 (1-54)||(52156097-52156150)
chr3 (1-56)||(48532173-48532229)
chr3 (1-56)||(22288-22343)
chr3 (1-56)||(47233607-47233662)
chr3 (1-56)||(54364987-54365041)
chr3 (9-55)||(7278688-7278734)
chr3 (14-56)||(24778620-24778662)
chr3 (1-43)||(38850337-38850379)
chr3 (14-56)||(52927859-52927901)
chr3 (11-56)||(21862752-21862797)
[»] chr2 (27 HSPs)
chr2 (1-56)||(227405-227460)
chr2 (1-56)||(3635334-3635389)
chr2 (1-56)||(4807811-4807866)
chr2 (1-56)||(12474938-12474993)
chr2 (1-56)||(17670684-17670739)
chr2 (1-56)||(28508894-28508949)
chr2 (1-56)||(30306248-30306303)
chr2 (1-56)||(451659-451714)
chr2 (1-56)||(3243664-3243719)
chr2 (1-56)||(3866288-3866343)
chr2 (1-56)||(7326171-7326226)
chr2 (1-56)||(12520073-12520128)
chr2 (1-56)||(25834894-25834949)
chr2 (1-56)||(38328381-38328436)
chr2 (1-56)||(38430100-38430155)
chr2 (10-56)||(41763054-41763100)
chr2 (1-46)||(45367646-45367691)
chr2 (11-55)||(8181006-8181050)
chr2 (5-56)||(9531611-9531662)
chr2 (5-56)||(33504444-33504495)
chr2 (1-56)||(35643164-35643219)
chr2 (1-56)||(38452697-38452752)
chr2 (1-56)||(39709212-39709267)
chr2 (5-56)||(43573141-43573192)
chr2 (14-54)||(16521020-16521060)
chr2 (1-45)||(19334174-19334218)
chr2 (181-236)||(27279493-27279546)
[»] chr1 (38 HSPs)
chr1 (1-56)||(1210961-1211016)
chr1 (1-56)||(15086138-15086193)
chr1 (1-56)||(22090312-22090367)
chr1 (1-56)||(25979242-25979297)
chr1 (1-56)||(28533683-28533738)
chr1 (1-56)||(29577468-29577523)
chr1 (1-56)||(30202141-30202196)
chr1 (1-56)||(49347404-49347459)
chr1 (1-56)||(34792360-34792415)
chr1 (1-56)||(37311766-37311821)
chr1 (1-56)||(44751700-44751755)
chr1 (1-56)||(44941787-44941842)
chr1 (1-56)||(52921296-52921351)
chr1 (10-54)||(46423229-46423273)
chr1 (1-56)||(3777271-3777326)
chr1 (1-56)||(4029338-4029393)
chr1 (1-56)||(8672134-8672189)
chr1 (1-56)||(9592950-9593005)
chr1 (5-56)||(37462887-37462938)
chr1 (1-56)||(38807682-38807737)
chr1 (5-56)||(38877354-38877405)
chr1 (5-56)||(41165502-41165553)
chr1 (5-56)||(41560449-41560500)
chr1 (1-56)||(42337772-42337827)
chr1 (10-56)||(696495-696541)
chr1 (10-56)||(4318856-4318902)
chr1 (14-56)||(22175374-22175416)
chr1 (1-55)||(43240391-43240445)
chr1 (14-56)||(43481809-43481851)
chr1 (10-56)||(51602281-51602327)
chr1 (14-56)||(52561600-52561642)
chr1 (3-56)||(40568421-40568474)
chr1 (19-56)||(50830645-50830682)
chr1 (4-56)||(4001466-4001518)
chr1 (1-45)||(13578924-13578968)
chr1 (4-56)||(26299287-26299339)
chr1 (11-55)||(32082768-32082812)
chr1 (14-54)||(32404539-32404579)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-56)||(25543-25598)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-56)||(82934-82989)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-56)||(31684-31739)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-52)||(11564-11613)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-56)||(959-1014)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-56)||(16794-16849)


Alignment Details
Target: chr6 (Bit Score: 158; Significance: 7e-84; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 282 - 455
Target Start/End: Original strand, 32756412 - 32756585
Alignment:
Q  282 gtattcttcgagctactgtaacatgcatcaataaactaaatgagattaattaatggaatttttctactgtgtacttagatgacactaccccaatataaaa 381  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  32756412 gtattctttgagctactgtaacatgcatcaataaactaaatgagattaattaatggaattattctaccgtgtacttagatgacactaccccaatataaaa 32756511  T
Q  382 tacatcagtatcccctctagcattttaaggacatgcatattggttaattagttttactttaaaagggggtcact 455  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32756512 tacatcagtatcccctctagcatattaaggacatgcatattggttaattagttttactttaaaagggggtcact 32756585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 32756255 - 32756381
Alignment:
Q  125 taattatttgtaggtttattgaataactaacatatttagtttattataaaaatcaaatacatcagttattcaatgaaacgaaaataaattattttttact 224  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32756255 taattatttgtaggtttattgaataactaacgtatttaatttattataaaaatcagatacatcagttattcaatgaaacgaaaataaattattttttact 32756354  T
Q  225 tataaatgtgacgtagtgaagtgtata 251  Q
    |||||||||||| ||||||||| ||||    
T  32756355 tataaatgtgacatagtgaagtatata 32756381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3206525 - 3206470
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||| ||||    
T  3206525 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataagacttg 3206470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9706986 - 9707041
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  9706986 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 9707041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12890791 - 12890846
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  12890791 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 12890846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28085592 - 28085647
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  28085592 acactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28085647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30789140 - 30789085
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||| || || ||||||| |||||||||    
T  30789140 acactatgacgtcatttgatccatgtagccgatcctacttagtgggataaggcttg 30789085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31819047 - 31819102
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| ||| |||||    
T  31819047 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataatgcttg 31819102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32756137 - 32756192
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  32756137 acactatggcgtcatttgatccatgtagccgatcccacttagtggggtaagacttg 32756192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34934896 - 34934841
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  34934896 acactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttg 34934841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 608379 - 608432
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||| |||||||||| || ||||||| |||| ||||    
T  608379 actatgacgtcatttgatccatgtagccgaccctacttagtgggataagacttg 608432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 12119705 - 12119653
Alignment:
Q  5 tatgacgtcatttgatccatatagccga-ccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||| ||||||| |||||| ||||||| |||||||||    
T  12119705 tatgacgtcatttgatccatgtagccgacccccacttagtgggataaggcttg 12119653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1615289 - 1615234
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||||| ||  ||||||| |||| ||||    
T  1615289 acactatgacgtcatttgatccatgtagccgacctcatttagtgggataagacttg 1615234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5258214 - 5258159
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||  ||||||||||||| ||||||| |||| ||||    
T  5258214 acactatggcgtcatttgatccacgtagccgaccccacttagtgggataagtcttg 5258159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30031472 - 30031527
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||| ||| ||||||| |||||||||    
T  30031472 acactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttg 30031527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34143831 - 34143776
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||| ||||||||| || |||| |||||||||    
T  34143831 acactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttg 34143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34156447 - 34156392
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||| ||||||||| || |||| |||||||||    
T  34156447 acactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttg 34156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21886320 - 21886374
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||| ||||||||||||||||||| ||||||||||||  ||||||  ||||||||    
T  21886320 acacaatgacgtcatttgatccatgtagccgaccccatttagtggtataaggctt 21886374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36545365 - 36545420
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  36545365 acactatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 36545420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11523789 - 11523734
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  11523789 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 11523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14742148 - 14742093
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  14742148 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 14742093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12491204 - 12491150
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  12491204 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 12491150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15215478 - 15215423
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| || |||||||||    
T  15215478 acactatgacgtcatatgatccatgtagccgaccccacttagtaggataaggcttg 15215423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25473469 - 25473414
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||  ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  25473469 acactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25473414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 36930931 - 36930990
Alignment:
Q  139 tttattgaataactaacatatttagtttattataaaaatcaaatacatcagttattcaat 198  Q
    |||||||||||||||| ||||||||||| | ||| | ||||||| |||||||||||||||    
T  36930931 tttattgaataactaatatatttagtttgtaatatagatcaaatgcatcagttattcaat 36930990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44529441 - 44529496
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  44529441 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 44529496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 41031473 - 41031431
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  41031473 atttgatccatatagccgaccccacttagtgggataaggcttg 41031431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 41031579 - 41031537
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  41031579 atttgatccatatagccgaccccacttagtgggataaggcttg 41031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36565307 - 36565254
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||    
T  36565307 acactatggcgttatttgatccatgtagccgaccccacttagtgggataaggct 36565254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 490555 - 490606
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  490555 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 490606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 1928649 - 1928598
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  1928649 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 1928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10668563 - 10668508
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||| ||||||||||| || ||||||||| ||| ||||||| |||||||||    
T  10668563 acactatgaggtcatttgatcgatgtagccgacctcacttagtgggataaggcttg 10668508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 30689955 - 30690006
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| ||| |||||    
T  30689955 tatgacgtaatttgatccatgtagccgaccccacttagtgggataatgcttg 30690006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 35323993 - 35324044
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||  ||||||||||||| ||||||| |||||||||    
T  35323993 tatgacgtaatttgatccacgtagccgaccccacttagtgggataaggcttg 35324044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42469793 - 42469738
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| |||| |||||||| || |||| |||||||||    
T  42469793 acactatggcgtcatttgatccatgtagctgaccccacttattgggataaggcttg 42469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42854070 - 42854019
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaagg 52  Q
    |||||||| ||||||||||||||| ||||||||||||  ||||||| |||||    
T  42854070 acactatggcgtcatttgatccatgtagccgaccccatttagtgggataagg 42854019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44047598 - 44047543
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  44047598 acaccatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttg 44047543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 69146 - 69084
Alignment:
Q  136 aggtttattgaataactaacatatttagtttattataaaaatcaaatacatcagttattcaat 198  Q
    ||||||||| ||||| ||| |||||| || ||| ||| ||||||||||||||| |||||||||    
T  69146 aggtttatttaataaataatatattttgtctataatataaatcaaatacatcatttattcaat 69084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 39651081 - 39651039
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||| |||||||||| ||||||| |||||||||    
T  39651081 atttgatccatatacccgaccccacttagtgggataaggcttg 39651039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 45419464 - 45419506
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttg 45419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40813540 - 40813585
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggg 46  Q
    |||||||||| ||||||||||||| ||||| ||||||| |||||||    
T  40813540 acactatgacatcatttgatccatgtagccaaccccacttagtggg 40813585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36042414 - 36042450
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgacccca 37  Q
    |||||||||||||||||||||||| |||| |||||||    
T  36042414 acactatgacgtcatttgatccatgtagcggacccca 36042450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 36395000 - 36394960
Alignment:
Q  15 tttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||||| ||||||||||||| ||||||| ||||||||    
T  36395000 tttgatccatgtagccgaccccacttagtgggataaggctt 36394960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 547 - 602
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  547 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28955 - 28900
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  28955 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6375084 - 6375139
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  6375084 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 6375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11594176 - 11594231
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  11594176 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 11594231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12841341 - 12841286
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  12841341 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12841286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28208394 - 28208339
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  28208394 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28208339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31682668 - 31682613
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  31682668 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31682613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35906267 - 35906212
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  35906267 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 35906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39906438 - 39906383
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  39906438 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 39906383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 7273317 - 7273371
Alignment:
Q  2 cactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  7273317 cactatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 7273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36652208 - 36652261
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  36652208 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 36652261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45836548 - 45836495
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  45836548 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 45836495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29650600 - 29650655
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| | ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  29650600 acactaaggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31869168 - 31869113
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||| || ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  31869168 acactctggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31869113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 33073149 - 33073200
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  33073149 tatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttg 33073200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34035220 - 34035165
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| | |||||||    
T  34035220 acactatggcgtcatttgatccatgtagccgaccccacttagtgggattaggcttg 34035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37618161 - 37618216
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  37618161 acactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 37618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40979994 - 40979939
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  40979994 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 40979939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43281890 - 43281945
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  43281890 acactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttg 43281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 22349838 - 22349891
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||||| ||| ||||||||| ||||||| |||||||||    
T  22349838 actatggcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttg 22349891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31005431 - 31005476
Alignment:
Q  11 gtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  31005431 gtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31005476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 31681084 - 31681031
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||  ||||||||    
T  31681084 actatgacgtaatttgatccatgtagccgaccccacttagtgggaaaaggcttg 31681031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 40630652 - 40630705
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  40630652 actatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 40630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 32631783 - 32631835
Alignment:
Q  4 ctatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||| |||||||||||| || ||||||||||||| ||||||| |||||||||    
T  32631783 ctatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttg 32631835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2885788 - 2885733
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||  || ||||||||||| ||||||||||||| ||||||| |||||||||    
T  2885788 acactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 2885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 7220976 - 7221027
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||| ||||| ||||||| |||||| ||||||||||    
T  7220976 tatgacatcatttgatccatgtagccaaccccacttagtggtgtaaggcttg 7221027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27648996 - 27649051
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||| || ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  27648996 acactgtggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 27649051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 28708601 - 28708652
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  28708601 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 28708652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34869636 - 34869691
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| |||||||||| |  ||||||| |||||||||    
T  34869636 acactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttg 34869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38900173 - 38900227
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  38900173 acactatggcgtcatttgatccatgtagccga-cccacttagtgggataaggcttg 38900227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43491524 - 43491579
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||| || |||| |||||| ||||||||||||| ||||||| |||||||||    
T  43491524 acactatgatgtaatttcatccatgtagccgaccccacttagtgggataaggcttg 43491579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44855240 - 44855185
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||| ||||| ||||||||||||| ||||||| |||||||||    
T  44855240 acactatggcgtaatttggtccatgtagccgaccccacttagtgggataaggcttg 44855185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46355922 - 46355867
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||| | |||||||||    
T  46355922 acactatgccatcatttgatccatgtagccgaccccacttagtgagataaggcttg 46355867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48515491 - 48515546
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||| ||||||||| | ||||||||||||| ||||||| |||| ||||    
T  48515491 acactatgacgtaatttgatccgtgtagccgaccccacttagtgggataagacttg 48515546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 6263488 - 6263530
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  6263488 atttgatccatgtagccgaccccacttagtgggataaggcttg 6263530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 42187661 - 42187711
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| ||||||||    
T  42187661 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggctt 42187711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 48919329 - 48919383
Alignment:
Q  2 cactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||| ||||||||||||||| ||| ||||||||| || |||| |||||||||    
T  48919329 cactatggcgtcatttgatccatgtagtcgaccccacttaatgggataaggcttg 48919383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19119490 - 19119445
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggg 46  Q
    ||||||||||||| |||||| ||| ||||||||||||| |||||||    
T  19119490 acactatgacgtcgtttgattcatgtagccgaccccacttagtggg 19119445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 42969927 - 42969968
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  42969927 atttgatccatgtagccgaccccacttagtgggataaggctt 42969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49029492 - 49029537
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggg 46  Q
    |||||||| ||||||||||||||| ||||| ||||||| |||||||    
T  49029492 acactatggcgtcatttgatccatgtagccaaccccacttagtggg 49029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2915562 - 2915507
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  2915562 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 2915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13561452 - 13561397
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  13561452 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 13561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29816598 - 29816653
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  29816598 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29816653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30213791 - 30213846
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  30213791 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 408558 - 408505
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  408558 actatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 408505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1275484 - 1275532
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggc 53  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  1275484 tatgacgtcatttgatccatgtagccgaccccacttagtgggataaggc 1275532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1287645 - 1287590
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  1287645 acactatggcgtcagttgatccatgtagccgaccccacttagtgggataaggcttg 1287590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3302060 - 3302115
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| | ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  3302060 acactacggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 3302115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4496600 - 4496655
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  4496600 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 4496655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10639518 - 10639573
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||| |||||||||    
T  10639518 acactatggcgtcatttgatccatgtagccgaccccactttgtgggataaggcttg 10639573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12492450 - 12492395
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  12492450 acactatggcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttg 12492395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 20456993 - 20457044
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  20456993 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 20457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28976925 - 28976870
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  28976925 acactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttg 28976870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 38685187 - 38685238
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  38685187 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 38685238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5558357 - 5558412
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | | ||||||||||| ||||||||||||| ||||||| |||||||||    
T  5558357 acactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttg 5558412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 11069224 - 11069173
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| |||||||||||||||| |||||||||||||||| || ||||||    
T  11069224 tatggcgtaatttgatccatatagctgaccccacatagtgggatatggcttg 11069173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 2075537 - 2075484
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||| ||| ||||| ||||||| ||||||| |||||||||    
T  2075537 actatggcgtcatttgattcatgtagccaaccccacttagtgggataaggcttg 2075484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 42272697 - 42272746
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    |||| ||||||||||||||| |||| |||||||| ||||||| |||||||    
T  42272697 tatggcgtcatttgatccatgtagctgaccccacttagtgggataaggct 42272746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16913949 - 16913893
Alignment:
Q  1 acactatgacgtcatttgatccatatagccga-ccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||||||| ||||||| |||||| ||||||| |||||||||    
T  16913949 acaccatggcgtcatttgatccatgtagccgacccccacttagtgggataaggcttg 16913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27386560 - 27386608
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggc 53  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| ||||||    
T  27386560 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggc 27386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 28499841 - 28499788
Alignment:
Q  181 atacatcagttattcaatgaaacgaaaataaattattttttacttataaatgtgac 236  Q
    |||||| |||||||||||||| | ||||  ||||||||||| ||||||||||||||    
T  28499841 atacattagttattcaatgaatctaaaa--aattattttttgcttataaatgtgac 28499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6957814 - 6957869
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  6957814 acactatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttg 6957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8286655 - 8286710
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||    
T  8286655 acactatgacgtcatttgatccatgtagccgcccccacttagtgggataaggcttg 8286710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19062001 - 19061946
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  19062001 acactatggcgtcatttgatccatgtagccgaccccacctagtgggataaggcttg 19061946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27450246 - 27450191
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  27450246 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 27450191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31959880 - 31959825
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  31959880 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31959825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33190914 - 33190859
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||    
T  33190914 acactatgacgtcatttgacccatgtagccgaccccacctagtgggataaggcttg 33190859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52569581 - 52569526
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  52569581 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 52569526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4441069 - 4441123
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  4441069 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49939800 - 49939747
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  49939800 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 49939747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 50238679 - 50238626
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  50238679 actatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 50238626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 50238765 - 50238712
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  50238765 actatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 50238712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 436445 - 436500
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  436445 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 436500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12494879 - 12494934
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||||| |||||| |||| |||||||| ||||||| |||||||||    
T  12494879 acactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttg 12494934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23906363 - 23906308
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  23906363 acactatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttg 23906308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33227425 - 33227480
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||  |||||||||    
T  33227425 acactatgacgtcatttgatccatgtagccgatcccacctagtggaataaggcttg 33227480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48622609 - 48622554
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| |||||||| |||||| ||||||||||||| ||||||| |||||||||    
T  48622609 acactatggcgtcatttaatccatgtagccgaccccacttagtgggataaggcttg 48622554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 51811344 - 51811290
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  51811344 acactatgacgtcatttgatccatgtagccga-cccacttagtgggataaggcttg 51811290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 55007966 - 55008017
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  55007966 tatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 55008017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 56375506 - 56375561
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||| |||| ||||    
T  56375506 acactatgacgtcatttgatccatgtagccgacctcacttagtgggataagacttg 56375561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 19969400 - 19969450
Alignment:
Q  4 ctatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  19969400 ctatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 19969450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 28351788 - 28351830
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  28351788 atttgatccatgtagccgaccccacttagtggggtaaggcttg 28351830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32479254 - 32479298
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtgg 45  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||    
T  32479254 acactatggcgtcatttgatccatgtagccgaccccacttagtgg 32479298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 1777079 - 1777028
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||||||||||||||| ||||||||||||| || |||| |||||||||    
T  1777079 tatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 1777028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 3979140 - 3979191
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||||| || |||||||||||| |||||||||    
T  3979140 tatgacgtaatttgatccatgtagcctactccacatagtgggataaggcttg 3979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7947153 - 7947208
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||| | || ||||||||||| ||||||||||||| ||||||| |||||||||    
T  7947153 acactatcatgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 7947208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21528516 - 21528559
Alignment:
Q  13 catttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  21528516 catttgatccatgtagccgaccccacttagtgggataaggcttg 21528559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31961332 - 31961277
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||| |||||| ||| ||||||||| ||| ||||||| |||||||||    
T  31961332 acactatgacgtcgtttgattcatgtagccgacctcacttagtgggataaggcttg 31961277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 48174155 - 48174104
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  48174155 tatggcgtcatttgatccatgtagcagaccccacttagtgggataaggcttg 48174104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53708010 - 53708065
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||| ||||  ||| ||||||| |||||||||    
T  53708010 acactatgacgtcatttgatccatttagtcgacatcacttagtgggataaggcttg 53708065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 30634159 - 30634117
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  30634159 atttgatccatgtagccgaccccacttagtgggataaggcttg 30634117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 50862860 - 50862902
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  50862860 atttgatccatgtagccgaccccacttagtgggataaggcttg 50862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 45209257 - 45209216
Alignment:
Q  15 tttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||| ||||||||||||| ||||||| |||||||||    
T  45209257 tttgatccatgtagccgaccccacttagtgggataaggcttg 45209216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27983409 - 27983445
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgacccca 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  27983409 acactatgacgtcatttgatccatgtagccgatccca 27983445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5169048 - 5169103
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  5169048 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 5169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12096771 - 12096716
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  12096771 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52139016 - 52139071
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  52139016 acactatgacgttatttgatccatgtagccgaccccacttagtgggataaggcttg 52139071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53519796 - 53519851
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| | |||||||||    
T  53519796 acactatgacgtcatttgatccatgtagccgaccccacttagtgagataaggcttg 53519851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 53951985 - 53952026
Alignment:
Q  15 tttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  53951985 tttgatccatatagccgaccccacatagtgggataaggcttg 53952026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 311375 - 311320
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  311375 acactatggcgtcatttgatacatgtagccgaccccacttagtgggataaggcttg 311320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7895946 - 7895891
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| || |||| |||||||||    
T  7895946 acactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 7895891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28245653 - 28245708
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||| | |||||||||    
T  28245653 acactatgacgtcatttgatccatgtagccgatcccacttagtgagataaggcttg 28245708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31454291 - 31454236
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  31454291 acactatggcgtcatttgattcatttagccgaccccacttagtgggataaggcttg 31454236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31566227 - 31566172
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  31566227 acactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31566172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41529977 - 41530032
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  41529977 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 41530032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47555398 - 47555343
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  47555398 acactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 47555343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48508451 - 48508506
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  48508451 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 48508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53262357 - 53262412
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| |||||||||||| || ||||||||||||| ||||||| |||||||||    
T  53262357 acactatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttg 53262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 45834665 - 45834611
Alignment:
Q  2 cactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||| ||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  45834665 cactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 45834611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 659755 - 659796
Alignment:
Q  15 tttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  659755 tttgatccatgtagccgaccccacttagtggggtaaggcttg 659796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40273271 - 40273226
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggg 46  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  40273271 acactatggcgtcatttgatccatgtagccgaccccacttagtggg 40273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 52156150 - 52156097
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||| |||||||    
T  52156150 acactatggcgtcatctgatccatgtagccgaccccacttagtgggataaggct 52156097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48532173 - 48532229
Alignment:
Q  1 acactatgacgtcatttgatcca-tatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| |||||||||||||| | ||||||||||||| ||||||| |||||||||    
T  48532173 acactatggcgtcatttgatccaatgtagccgaccccacttagtgggataaggcttg 48532229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22288 - 22343
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| |||||||||||| || ||||||||||||| ||||||| ||| |||||    
T  22288 acactatggcgtcatttgatctatgtagccgaccccacttagtgggataaagcttg 22343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47233662 - 47233607
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||| ||| ||||||||||||  ||||||| |||||||||    
T  47233662 acactatggcgtcatttgattcatgtagccgaccccagttagtgggataaggcttg 47233607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 54365041 - 54364987
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||| ||||||||||| ||||||||| ||| ||||||| |||||||||    
T  54365041 acactatgacgtaatttgatccatgtagccgaccacac-tagtgggataaggcttg 54364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 7278688 - 7278734
Alignment:
Q  9 acgtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||||||||||| ||||||||||||| ||||||| ||| ||||    
T  7278688 acgtcatttgatccatgtagccgaccccacttagtgggataaagctt 7278734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 24778662 - 24778620
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  24778662 atttgatccatgtagccgaccccacttagtgggataaggcttg 24778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38850337 - 38850379
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagt 43  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  38850337 acactatgacgtaatttgatccatgtagccgaccccacttagt 38850379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 52927901 - 52927859
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  52927901 atttgatccatgtagccgaccccacttagtgggataaggcttg 52927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 21862797 - 21862752
Alignment:
Q  11 gtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||| ||||||||||||| ||||| | |||||||||    
T  21862797 gtcatttgatccatgtagccgaccccacttagtgagataaggcttg 21862752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 227405 - 227460
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  227405 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 227460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3635389 - 3635334
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  3635389 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 3635334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4807811 - 4807866
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  4807811 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 4807866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12474993 - 12474938
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  12474993 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17670684 - 17670739
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  17670684 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 17670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28508894 - 28508949
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  28508894 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28508949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30306248 - 30306303
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  30306248 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 451714 - 451659
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  451714 acactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttg 451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3243719 - 3243664
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||  ||||||||||||| ||||||| |||||||||    
T  3243719 acactatggcgtcatttgatccaggtagccgaccccacttagtgggataaggcttg 3243664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3866288 - 3866343
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| || |||||||||    
T  3866288 acactatgacatcatttgatccatgtagccgaccccacttagtaggataaggcttg 3866343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7326226 - 7326171
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  7326226 acactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 7326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12520128 - 12520073
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  12520128 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 12520073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25834894 - 25834949
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||| || ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  25834894 acactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38328436 - 38328381
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  38328436 acactatggcttcatttgatccatgtagccgaccccacttagtgggataaggcttg 38328381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38430100 - 38430155
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| | |||||||||    
T  38430100 acactatggcgtcatttgatccatgtagccgaccccacttagtgagataaggcttg 38430155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 41763100 - 41763054
Alignment:
Q  10 cgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  41763100 cgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 41763054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45367691 - 45367646
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggg 46  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  45367691 acactatgacgtcatttgatccatgtcgccgaccccacttagtggg 45367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 8181006 - 8181050
Alignment:
Q  11 gtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||    
T  8181006 gtcatttgatccatgtagccgaccccacttagtgggataaggctt 8181050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 9531662 - 9531611
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  9531662 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 9531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 33504444 - 33504495
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  33504444 tatggcgtaatttgatccatctagccgaccccacttagtgggataaggcttg 33504495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35643164 - 35643219
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||| |||||| || ||| ||||||||||||| ||||||| |||||||||    
T  35643164 acactatgacatcatttaatacatgtagccgaccccacttagtgggataaggcttg 35643219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38452752 - 38452697
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||  |||||| ||||||| ||||||||||||| ||||||| |||||||||    
T  38452752 acactatggtgtcattcgatccatgtagccgaccccacttagtgggataaggcttg 38452697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39709267 - 39709212
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| || ||||||    
T  39709267 acactatggcgtaatttgatccatgtagccgaccccacttagtgggatatggcttg 39709212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 43573192 - 43573141
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  43573192 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 43573141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 16521060 - 16521020
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    ||||||||||| ||||||||||||| ||||||| |||||||    
T  16521060 atttgatccatgtagccgaccccacttagtgggataaggct 16521020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19334218 - 19334174
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtgg 45  Q
    |||||||||||||||||||| ||| |||||||| |||| ||||||    
T  19334218 acactatgacgtcatttgattcatgtagccgactccacttagtgg 19334174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 27279546 - 27279493
Alignment:
Q  181 atacatcagttattcaatgaaacgaaaataaattattttttacttataaatgtgac 236  Q
    |||||| |||||||||||||| | ||||  ||||||||||| ||||||||||||||    
T  27279546 atacattagttattcaatgaacctaaaa--aattattttttgcttataaatgtgac 27279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1210961 - 1211016
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  1210961 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 1211016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15086138 - 15086193
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  15086138 acactatgacgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 15086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22090312 - 22090367
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| |||||||||||||  |||||| |||||||||    
T  22090312 acactatgacgtcatttgatccatgtagccgaccccactaagtgggataaggcttg 22090367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25979297 - 25979242
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  25979297 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25979242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28533683 - 28533738
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||    
T  28533683 acactatgacgtcatttgatccatgtagccgaccccacttagtgggataagacttg 28533738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29577468 - 29577523
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  29577468 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29577523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30202196 - 30202141
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  30202196 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30202141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49347459 - 49347404
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  49347459 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 49347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34792415 - 34792360
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| || |||| |||||||||    
T  34792415 acactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 34792360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37311821 - 37311766
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  37311821 acactatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 37311766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44751700 - 44751755
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| ||||||||| ||| ||||||| |||||||||    
T  44751700 acactatggcgtcatttgatccatgtagccgacctcacttagtgggataaggcttg 44751755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44941842 - 44941787
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  44941842 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 44941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52921296 - 52921351
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||  ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  52921296 acactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 52921351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 46423273 - 46423229
Alignment:
Q  10 cgtcatttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  46423273 cgtcatttgatccatgtagccgaccccacttagtgggataaggct 46423229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3777326 - 3777271
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||| ||||| |||| || ||| |||||    
T  3777326 acactatgacgtcatttgatccatgtagccgatcccacttagtaggataatgcttg 3777271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4029338 - 4029393
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| || |||||||||||| ||||||||||||| ||||||| |||| ||||    
T  4029338 acactatggcgacatttgatccatgtagccgaccccacttagtgggataagacttg 4029393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8672134 - 8672189
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||  ||||||||||||||||||||| ||||||| |||| || |||||||||    
T  8672134 acactatagcgtcatttgatccatatagccaaccccacttagtaggataaggcttg 8672189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9592950 - 9593005
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||  ||||||||||||||| ||||||||||||| || |||| |||||||||    
T  9592950 acactatagcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 9593005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 37462938 - 37462887
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  37462938 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 37462887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38807737 - 38807682
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||| ||||| ||||| ||||||||||||| ||||||| |||||||||    
T  38807737 acactatggcgtaatttgttccatgtagccgaccccacttagtgggataaggcttg 38807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 38877405 - 38877354
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  38877405 tatggcgtcatttgatccatgtagccgaacccacttagtgggataaggcttg 38877354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 41165502 - 41165553
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  41165502 tatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 41165553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 41560449 - 41560500
Alignment:
Q  5 tatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  41560449 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 41560500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42337772 - 42337827
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| | ||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  42337772 acactatggcatcatttgatccatgtagccaaccccacttagtgggataaggcttg 42337827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 696495 - 696541
Alignment:
Q  10 cgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||||    
T  696495 cgtcatttgatcaatgtagccgaccccacttagtgggataaggcttg 696541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 4318902 - 4318856
Alignment:
Q  10 cgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  4318902 cgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 4318856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 22175374 - 22175416
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  22175374 atttgatccatgtagccgaccccacttagtgggataaggcttg 22175416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43240445 - 43240391
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||| ||||||||||| ||| ||||||||| ||| ||||||| ||||||||    
T  43240445 acactatggcgtcatttgattcatgtagccgacctcacttagtgggataaggctt 43240391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 43481851 - 43481809
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttg 43481809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 51602281 - 51602327
Alignment:
Q  10 cgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  51602281 cgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 51602327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 52561642 - 52561600
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  52561642 atttgatccatgtagccgaccccacttagtgggataaggcttg 52561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 40568474 - 40568421
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||| ||||||||||| ||||| ||||||| ||||||| |||||||||    
T  40568474 actatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttg 40568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 50830682 - 50830645
Alignment:
Q  19 atccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  50830682 atccatgtagccgaccccacttagtggggtaaggcttg 50830645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 4001518 - 4001466
Alignment:
Q  4 ctatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||| ||||||||||||| ||||| ||||||| |||||||  ||||||||    
T  4001518 ctatgacatcatttgatccatgtagccaaccccacttagtgggaaaaggcttg 4001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13578968 - 13578924
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtgg 45  Q
    ||||||||||||| |||||| |||||||||||| |||| ||||||    
T  13578968 acactatgacgtcgtttgattcatatagccgactccacttagtgg 13578924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 26299287 - 26299339
Alignment:
Q  4 ctatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||| ||| ||||||||||| ||||||||||||| ||||||| |||| ||||    
T  26299287 ctatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttg 26299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 32082812 - 32082768
Alignment:
Q  11 gtcatttgatccatatagccgaccccacatagtggggtaaggctt 55  Q
    |||||||||||||| ||||||||||||| |||||||  |||||||    
T  32082812 gtcatttgatccatgtagccgaccccacttagtgggaaaaggctt 32082768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 32404579 - 32404539
Alignment:
Q  14 atttgatccatatagccgaccccacatagtggggtaaggct 54  Q
    ||||||||||| ||||||||||||| ||||||| |||||||    
T  32404579 atttgatccatgtagccgaccccacttagtgggataaggct 32404539  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25598 - 25543
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||||||||||||||| |||||| |||| |||||||| ||||||| |||||||||    
T  25598 acactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttg 25543  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 82934 - 82989
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||||||||||||||||||| ||||||||||||| || |||  |||||||||    
T  82934 acactatgacgtcatttgatccatgtagccgaccccacttaatggaataaggcttg 82989  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31684 - 31739
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    ||||| ||| |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  31684 acactgtgaagtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31739  T

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Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 11613 - 11564
Alignment:
Q  3 actatgacgtcatttgatccatatagccgaccccacatagtggggtaagg 52  Q
    |||||||||||||||||||||| ||||||||||||| |||| || |||||    
T  11613 actatgacgtcatttgatccatgtagccgaccccacttagtaggataagg 11564  T

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Target: scaffold0570 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1014 - 959
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| ||||||||||||||| |||| |||||||  ||||||| |||||||||    
T  1014 acactatggcgtcatttgatccatgtagctgaccccatttagtgggataaggcttg 959  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16794 - 16849
Alignment:
Q  1 acactatgacgtcatttgatccatatagccgaccccacatagtggggtaaggcttg 56  Q
    |||||||| |||||||||||| || |||||||| |||| ||||||| |||||||||    
T  16794 acactatggcgtcatttgatctatgtagccgactccacttagtgggataaggcttg 16849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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