View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20944_high_1 (Length: 790)

Name: NF20944_high_1
Description: NF20944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20944_high_1
NF20944_high_1
[»] chr2 (30 HSPs)
chr2 (19-775)||(2665210-2665966)
chr2 (674-757)||(44860319-44860404)
chr2 (678-742)||(34784961-34785027)
chr2 (706-756)||(21616762-21616812)
chr2 (707-753)||(36281688-36281734)
chr2 (674-755)||(2331795-2331876)
chr2 (706-755)||(30527604-30527653)
chr2 (706-742)||(20922937-20922973)
chr2 (674-735)||(28524447-28524510)
chr2 (674-755)||(22084805-22084890)
chr2 (706-756)||(23718026-23718076)
chr2 (706-756)||(24105698-24105748)
chr2 (706-756)||(31808077-31808127)
chr2 (706-756)||(37411253-37411303)
chr2 (673-757)||(4207856-4207941)
chr2 (702-755)||(28412351-28412404)
chr2 (707-756)||(28677909-28677958)
chr2 (710-755)||(31018591-31018636)
chr2 (706-755)||(35449514-35449563)
chr2 (706-755)||(39279676-39279725)
chr2 (706-742)||(20242736-20242772)
chr2 (705-756)||(19573978-19574029)
chr2 (710-753)||(23921256-23921299)
chr2 (674-738)||(35056886-35056952)
chr2 (701-756)||(36409631-36409686)
chr2 (706-748)||(5367200-5367242)
chr2 (706-756)||(16069263-16069313)
chr2 (706-756)||(18276521-18276571)
chr2 (709-751)||(35191591-35191633)
chr2 (711-748)||(21782832-21782869)
[»] scaffold0123 (1 HSPs)
scaffold0123 (674-757)||(44500-44585)
[»] chr8 (31 HSPs)
chr8 (686-757)||(11803258-11803331)
chr8 (706-756)||(39954288-39954338)
chr8 (706-756)||(4786347-4786397)
chr8 (706-748)||(14731720-14731762)
chr8 (706-756)||(34897085-34897135)
chr8 (706-750)||(33405393-33405437)
chr8 (706-756)||(11927095-11927145)
chr8 (706-748)||(13844605-13844647)
chr8 (677-748)||(15816107-15816180)
chr8 (706-756)||(24362211-24362261)
chr8 (674-748)||(2572031-2572107)
chr8 (707-756)||(4611534-4611583)
chr8 (708-753)||(13018284-13018329)
chr8 (706-755)||(20785474-20785523)
chr8 (679-748)||(29776044-29776113)
chr8 (706-758)||(12570517-12570569)
chr8 (710-750)||(31580140-31580180)
chr8 (709-748)||(14134707-14134746)
chr8 (710-748)||(3025559-3025597)
chr8 (706-768)||(7472524-7472586)
chr8 (706-756)||(11944665-11944715)
chr8 (709-751)||(24447034-24447076)
chr8 (706-748)||(27213555-27213597)
chr8 (706-748)||(31236586-31236628)
chr8 (706-748)||(34222955-34222997)
chr8 (709-758)||(12570746-12570795)
chr8 (712-757)||(24669432-24669477)
chr8 (709-746)||(26529751-26529788)
chr8 (706-739)||(26902184-26902217)
chr8 (706-755)||(33382028-33382077)
chr8 (701-754)||(37283814-37283867)
[»] chr3 (37 HSPs)
chr3 (706-756)||(32804549-32804599)
chr3 (706-753)||(49505163-49505210)
chr3 (706-748)||(11313809-11313851)
chr3 (706-756)||(16192759-16192809)
chr3 (674-756)||(25064909-25064991)
chr3 (674-756)||(55212963-55213046)
chr3 (675-747)||(15812799-15812871)
chr3 (689-749)||(2731819-2731881)
chr3 (668-748)||(11665952-11666034)
chr3 (709-755)||(4201397-4201443)
chr3 (706-756)||(7928450-7928500)
chr3 (684-755)||(8039820-8039893)
chr3 (650-757)||(34307737-34307840)
chr3 (674-748)||(4987266-4987342)
chr3 (674-748)||(14209121-14209197)
chr3 (710-755)||(14840304-14840349)
chr3 (674-756)||(15796269-15796353)
chr3 (711-748)||(27277852-27277889)
chr3 (356-416)||(10124712-10124772)
chr3 (356-416)||(10181144-10181204)
chr3 (712-756)||(10268501-10268545)
chr3 (709-756)||(7614427-7614474)
chr3 (709-756)||(8842330-8842376)
chr3 (709-756)||(10690274-10690321)
chr3 (701-748)||(11251986-11252033)
chr3 (706-745)||(15314885-15314924)
chr3 (706-753)||(38731221-38731268)
chr3 (678-748)||(2620034-2620104)
chr3 (710-756)||(8383257-8383303)
chr3 (706-756)||(25093502-25093552)
chr3 (713-751)||(28098143-28098181)
chr3 (706-748)||(48202278-48202320)
chr3 (712-757)||(1509538-1509583)
chr3 (708-757)||(9624640-9624689)
chr3 (706-751)||(11658820-11658865)
chr3 (707-748)||(12704015-12704056)
chr3 (674-748)||(17005594-17005670)
[»] chr1 (54 HSPs)
chr1 (674-748)||(12713302-12713378)
chr1 (674-748)||(12717393-12717469)
chr1 (706-756)||(39953155-39953205)
chr1 (709-756)||(34257922-34257969)
chr1 (678-746)||(44482240-44482310)
chr1 (706-756)||(1864889-1864939)
chr1 (674-748)||(12707848-12707924)
chr1 (707-748)||(14332652-14332693)
chr1 (710-759)||(25272479-25272528)
chr1 (679-756)||(17754311-17754390)
chr1 (706-749)||(39130776-39130819)
chr1 (706-756)||(2784556-2784606)
chr1 (706-748)||(7918220-7918262)
chr1 (706-756)||(13997883-13997933)
chr1 (706-756)||(25098564-25098614)
chr1 (683-746)||(25361896-25361961)
chr1 (674-756)||(26238091-26238171)
chr1 (674-757)||(34371713-34371797)
chr1 (706-748)||(34712392-34712434)
chr1 (710-756)||(36878461-36878507)
chr1 (706-755)||(6427351-6427400)
chr1 (674-748)||(16164290-16164366)
chr1 (707-748)||(40181879-40181920)
chr1 (706-746)||(19324572-19324612)
chr1 (706-742)||(30749854-30749890)
chr1 (706-742)||(30771305-30771341)
chr1 (712-756)||(41877485-41877529)
chr1 (683-748)||(42004937-42004998)
chr1 (709-772)||(48148049-48148112)
chr1 (683-755)||(36905998-36906072)
chr1 (706-753)||(52903252-52903299)
chr1 (710-756)||(398778-398824)
chr1 (356-418)||(8254402-8254464)
chr1 (706-748)||(10233261-10233303)
chr1 (706-748)||(12443469-12443511)
chr1 (706-748)||(13436466-13436508)
chr1 (706-756)||(17425102-17425152)
chr1 (706-756)||(17831540-17831590)
chr1 (706-756)||(20157359-20157409)
chr1 (710-756)||(21530689-21530735)
chr1 (709-755)||(28674801-28674847)
chr1 (706-756)||(32724107-32724157)
chr1 (710-748)||(34298444-34298482)
chr1 (706-748)||(35999331-35999373)
chr1 (706-756)||(38503320-38503370)
chr1 (706-755)||(9709821-9709870)
chr1 (674-748)||(9828052-9828128)
chr1 (690-748)||(10572580-10572640)
chr1 (713-750)||(15323169-15323206)
chr1 (709-746)||(20131987-20132024)
chr1 (381-418)||(31242758-31242795)
chr1 (674-748)||(32461439-32461514)
chr1 (709-742)||(45534202-45534235)
chr1 (678-748)||(47989505-47989577)
[»] chr7 (40 HSPs)
chr7 (684-756)||(29787356-29787428)
chr7 (678-748)||(15902830-15902902)
chr7 (678-756)||(32308120-32308200)
chr7 (708-756)||(27093424-27093472)
chr7 (708-756)||(27184829-27184877)
chr7 (706-757)||(8160415-8160466)
chr7 (682-757)||(11700802-11700877)
chr7 (706-753)||(17851434-17851481)
chr7 (706-756)||(1433454-1433504)
chr7 (706-756)||(2948683-2948733)
chr7 (695-750)||(5233635-5233692)
chr7 (706-742)||(18213042-18213078)
chr7 (706-758)||(27732248-27732300)
chr7 (356-416)||(40101782-40101842)
chr7 (706-748)||(3721101-3721143)
chr7 (706-748)||(7328700-7328742)
chr7 (706-748)||(16341504-16341546)
chr7 (706-756)||(20549791-20549841)
chr7 (706-756)||(22602719-22602769)
chr7 (706-756)||(33384591-33384641)
chr7 (672-756)||(49088810-49088892)
chr7 (674-756)||(26329357-26329441)
chr7 (706-754)||(2425742-2425790)
chr7 (675-748)||(6630888-6630963)
chr7 (706-758)||(42720899-42720951)
chr7 (709-756)||(5235986-5236033)
chr7 (676-748)||(24339650-24339724)
chr7 (706-749)||(38143230-38143273)
chr7 (706-756)||(5548676-5548726)
chr7 (706-748)||(12278843-12278885)
chr7 (706-756)||(19206050-19206100)
chr7 (706-756)||(22484025-22484075)
chr7 (706-748)||(22868050-22868092)
chr7 (706-748)||(24146824-24146866)
chr7 (690-756)||(30731037-30731103)
chr7 (711-748)||(2424622-2424659)
chr7 (712-749)||(9408349-9408386)
chr7 (707-756)||(23191896-23191945)
chr7 (709-746)||(35493423-35493460)
chr7 (709-742)||(39138458-39138491)
[»] chr6 (43 HSPs)
chr6 (674-775)||(25038046-25038148)
chr6 (706-756)||(5732519-5732569)
chr6 (706-748)||(7086803-7086845)
chr6 (706-756)||(19040352-19040402)
chr6 (701-755)||(31579229-31579283)
chr6 (678-756)||(5970087-5970167)
chr6 (706-755)||(7265602-7265651)
chr6 (695-748)||(8805570-8805623)
chr6 (674-748)||(16766705-16766781)
chr6 (709-757)||(5462685-5462733)
chr6 (709-756)||(9658879-9658926)
chr6 (674-742)||(16488565-16488635)
chr6 (710-757)||(32511679-32511726)
chr6 (706-748)||(9025503-9025545)
chr6 (706-748)||(9195763-9195805)
chr6 (706-756)||(10842532-10842582)
chr6 (706-756)||(10888983-10889033)
chr6 (706-748)||(17302355-17302397)
chr6 (710-756)||(17341677-17341723)
chr6 (674-748)||(7248366-7248442)
chr6 (706-755)||(30866153-30866202)
chr6 (706-755)||(32298616-32298665)
chr6 (670-750)||(4118304-4118386)
chr6 (706-753)||(9617437-9617484)
chr6 (705-755)||(1532241-1532291)
chr6 (706-748)||(7151420-7151462)
chr6 (706-756)||(7377979-7378029)
chr6 (678-756)||(8713979-8714060)
chr6 (706-756)||(9027178-9027228)
chr6 (706-756)||(9629383-9629433)
chr6 (706-744)||(11591879-11591917)
chr6 (707-745)||(13360382-13360420)
chr6 (706-756)||(13851736-13851786)
chr6 (634-748)||(17435207-17435324)
chr6 (706-748)||(24832596-24832638)
chr6 (706-748)||(26178690-26178732)
chr6 (706-744)||(26562701-26562739)
chr6 (709-751)||(32248937-32248979)
chr6 (707-757)||(32320679-32320729)
chr6 (713-755)||(34447374-34447416)
chr6 (690-748)||(9522899-9522959)
chr6 (707-748)||(24833243-24833284)
chr6 (690-748)||(34073338-34073398)
[»] chr4 (31 HSPs)
chr4 (706-756)||(22440609-22440659)
chr4 (707-754)||(903924-903971)
chr4 (706-756)||(5775367-5775417)
chr4 (706-746)||(13134460-13134500)
chr4 (709-756)||(21539879-21539926)
chr4 (710-756)||(8423731-8423777)
chr4 (706-756)||(11931280-11931330)
chr4 (706-748)||(36635332-36635374)
chr4 (706-756)||(40613450-40613500)
chr4 (706-756)||(40742591-40742641)
chr4 (708-748)||(7214533-7214573)
chr4 (706-738)||(10499279-10499311)
chr4 (356-420)||(17471055-17471118)
chr4 (706-745)||(17876166-17876205)
chr4 (674-754)||(30982853-30982935)
chr4 (676-756)||(38148702-38148784)
chr4 (674-742)||(46083966-46084036)
chr4 (706-748)||(999357-999399)
chr4 (709-751)||(3731208-3731250)
chr4 (714-748)||(17446079-17446113)
chr4 (677-736)||(19500836-19500897)
chr4 (706-748)||(33950144-33950186)
chr4 (708-758)||(40179647-40179697)
chr4 (706-756)||(48139264-48139314)
chr4 (694-748)||(49652969-49653023)
chr4 (712-749)||(6485626-6485663)
chr4 (706-755)||(16189710-16189759)
chr4 (706-743)||(17344513-17344550)
chr4 (674-736)||(22234865-22234929)
chr4 (712-749)||(27706192-27706229)
chr4 (706-751)||(44081586-44081631)
[»] chr5 (30 HSPs)
chr5 (674-756)||(3966503-3966587)
chr5 (674-756)||(18592073-18592157)
chr5 (706-756)||(27144463-27144513)
chr5 (674-756)||(11685939-11686022)
chr5 (706-755)||(36838544-36838593)
chr5 (705-757)||(24273038-24273090)
chr5 (705-757)||(24389124-24389176)
chr5 (708-748)||(35017045-35017085)
chr5 (706-757)||(6471898-6471949)
chr5 (674-742)||(21814275-21814345)
chr5 (706-756)||(7175028-7175078)
chr5 (706-748)||(16203804-16203846)
chr5 (710-756)||(28588687-28588733)
chr5 (707-756)||(2577190-2577239)
chr5 (674-748)||(21522758-21522834)
chr5 (674-748)||(21533324-21533400)
chr5 (706-755)||(30502397-30502446)
chr5 (706-755)||(30542740-30542789)
chr5 (706-746)||(14873527-14873567)
chr5 (706-742)||(39758286-39758322)
chr5 (674-742)||(6401512-6401582)
chr5 (709-748)||(12927662-12927701)
chr5 (710-757)||(23016002-23016049)
chr5 (710-753)||(30098329-30098372)
chr5 (706-748)||(23012417-23012459)
chr5 (706-756)||(23220983-23221033)
chr5 (709-751)||(28262408-28262450)
chr5 (693-756)||(38749557-38749622)
chr5 (706-748)||(41091266-41091308)
chr5 (709-758)||(17593734-17593783)
[»] scaffold1528 (1 HSPs)
scaffold1528 (679-756)||(1035-1114)
[»] scaffold0236 (1 HSPs)
scaffold0236 (710-758)||(25781-25829)
[»] scaffold0110 (1 HSPs)
scaffold0110 (695-756)||(28850-28913)
[»] scaffold0022 (2 HSPs)
scaffold0022 (706-756)||(99893-99943)
scaffold0022 (709-755)||(90844-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (674-747)||(53189-53264)
[»] scaffold0024 (1 HSPs)
scaffold0024 (710-754)||(68255-68299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (668-748)||(263341-263423)
[»] scaffold0697 (1 HSPs)
scaffold0697 (710-756)||(1644-1690)
[»] scaffold0036 (1 HSPs)
scaffold0036 (706-748)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (706-748)||(135321-135363)
[»] scaffold0003 (1 HSPs)
scaffold0003 (674-736)||(241614-241678)


Alignment Details
Target: chr2 (Bit Score: 620; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 620; E-Value: 0
Query Start/End: Original strand, 19 - 775
Target Start/End: Original strand, 2665210 - 2665966
Alignment:
Q  19 gaactcagttttctccatgattagttttttatccttcacnnnnnnnnnnnnnnnnnnngtacttatataaagaaaatctgcattatttaatcatactact 118  Q
    |||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||    
T  2665210 gaactcagttttctccatgattagttttttatccttcacattattattattattattagtacttatataaagaaaatctgcattatttaatcatactact 2665309  T
Q  119 gttcttaaaatcttgtgttgatgaataggagtttaattgactggtttatcttaaattaagcaaaagaattgtttaattgggagtaggtgtgtatcttgag 218  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2665310 gttcttaaaatcttgtgttgatgaataggagtttaattgaccagtttaacttaaattaagcaaaagaattgtataattgggagtaggtgtgtatcttgag 2665409  T
Q  219 ggtccagttctttttcttttcttatggaaagtcacataaaaggacattaggtgattaggttcaataacaccgactgaactacgtaattgagcaataatat 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2665410 ggtccagttctttttcttttcttatggaaagtcacataaaaggacattaggtgattaggttcaataacaccaactgaactacgtaattaagcaataatat 2665509  T
Q  319 ttgatggagacccacccgcgatatggttaatcatgcgaaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggttaa 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  2665510 ttgatggagacccacccgcgatatggttaatcatgcgaaaaatatgattaattcatttgagtagatgatcaattcaattcacgttgaaaattatgcttaa 2665609  T
Q  419 ttgctagccacattgtttaacgtaattaaccagatgttgcggttgcgaccgtgtacaaaataggaatgtccatgtatttgatagttgagaaagtaactac 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2665610 ttgctagccacattgtttaacgtaattaaccagatgttgcggttgcgcccgtgtacaaaataggagtgtccatgtatttgatagttgagaaagtaactac 2665709  T
Q  519 ggccaaatggaggaaataagggaacataagtttgaaattagtcaccacagattcatcttgttcgagggtttgatgttgacagttttataataatcattgt 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2665710 ggccaaatggaggaaataagggaacataagtttgaaattagtcaccacagattcatcttgttcgagggtttgatgttgacagttttataataatcattgt 2665809  T
Q  619 atgtcgataactaccaagtacggcacttttcggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccacatataattac 718  Q
    | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2665810 acgtcgataactacgaagtacgacacttttcggattagacgtgcatcattatcaaacacgtgttgtgttcaacaccgacacaacacccacatataattac 2665909  T
Q  719 actaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgtg 775  Q
    ||||||||||||||||||||||||||||||  ||||| | |||||||| ||||||||    
T  2665910 actaaattatgtgattttctaaaattattagtggtgttagacatgtcactatctgtg 2665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 674 - 757
Target Start/End: Complemental strand, 44860404 - 44860319
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||| ||| |||||||||||| |||| |||||  |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||    
T  44860404 acacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtca 44860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 678 - 742
Target Start/End: Original strand, 34784961 - 34785027
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||| |||||| | |||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  34784961 gtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaa 34785027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 21616812 - 21616762
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  21616812 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 753
Target Start/End: Complemental strand, 36281734 - 36281688
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggt 36281688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 674 - 755
Target Start/End: Complemental strand, 2331876 - 2331795
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||| |||| || |||| ||||| ||||| ||| |||| |||||| |||||||||||||||| |||||||||| |||||    
T  2331876 acacgtgctgtgcccgacactgacacgacaccgacacataaatacactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 30527604 - 30527653
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  30527604 cacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 742
Target Start/End: Original strand, 20922937 - 20922973
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922937 cacatataattacactaaattatgtgattttctaaaa 20922973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 735
Target Start/End: Complemental strand, 28524510 - 28524447
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattt 735  Q
    ||||||||||||||| ||||| |||||||| |  |||||||||||||||| |||||||||||||    
T  28524510 acacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 674 - 755
Target Start/End: Original strand, 22084805 - 22084890
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataa--ttacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||||| |||| ||||| | |||  |||||||||  ||||||| |||||| ||||||||| ||||||||||||||||    
T  22084805 acacgtgttgtgtccgacactgacacgataccggcacatataaaattacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 23718076 - 23718026
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  23718076 cacatataattacactgaattatgtgactttctcaaattattagcggtgtc 23718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 24105748 - 24105698
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  24105748 cacatataattacactgaattatgtgactttctcaaattattagcggtgtc 24105698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 31808127 - 31808077
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  31808127 cacatataattacactgaattatgtgattttgttaaattattagcggtgtc 31808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 37411253 - 37411303
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  37411253 cacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 757
Target Start/End: Complemental strand, 4207941 - 4207856
Alignment:
Q  673 aacacgtgttgtgtccaacaccgacacaacacccaca-tataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||| |||||| |||||||||| | ||| ||| |||||||||||||||||||| | |||| | |||||||||  |||||||    
T  4207941 aacacgtgtcgtgtccgacaccgacacgataccgacaatataattacactaaattatgcgcttttttcaaattattagtggtgtca 4207856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 702 - 755
Target Start/End: Complemental strand, 28412404 - 28412351
Alignment:
Q  702 cacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||    
T  28412404 caccgacacataattacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 756
Target Start/End: Complemental strand, 28677958 - 28677909
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 755
Target Start/End: Complemental strand, 31018636 - 31018591
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||||    
T  31018636 tataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Complemental strand, 35449563 - 35449514
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| ||||    
T  35449563 cacatataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Complemental strand, 39279725 - 39279676
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||||||    
T  39279725 cacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 742
Target Start/End: Original strand, 20242736 - 20242772
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20242736 cacatataattacactgaattatgtgattttctaaaa 20242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 756
Target Start/End: Complemental strand, 19574029 - 19573978
Alignment:
Q  705 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| |||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  19574029 ccacctataattacactgaattatgttattttcttaaattattatcggtgtc 19573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 753
Target Start/End: Complemental strand, 23921299 - 23921256
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 738
Target Start/End: Complemental strand, 35056952 - 35056886
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttct 738  Q
    |||||||| |||||| |||||||||| |||||  |||||||||||||||| |||||| || ||||||    
T  35056952 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 701 - 756
Target Start/End: Original strand, 36409631 - 36409686
Alignment:
Q  701 acacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||| | |||||||    
T  36409631 acaccgacacataattacactaaattatgtgattttttcaaattatcagcggtgtc 36409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 5367242 - 5367200
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  5367242 cacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 16069263 - 16069313
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| ||||||||||| |||||| ||||||| | |||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtc 16069313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 18276571 - 18276521
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  18276571 cacacataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 35191591 - 35191633
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  35191591 atataattaccctaaattatgtgattttctcaaattatcaacg 35191633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 21782832 - 21782869
Alignment:
Q  711 ataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattatta 21782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 674 - 757
Target Start/End: Original strand, 44500 - 44585
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  44500 acacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtca 44585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 686 - 757
Target Start/End: Complemental strand, 11803331 - 11803258
Alignment:
Q  686 tccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  11803331 tccaacaccaacacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtca 11803258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 39954288 - 39954338
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 4786347 - 4786397
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  4786347 cacatataattacactgaattatgtgattttcttaaattattaatggtgtc 4786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 14731762 - 14731720
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14731762 cacatataattacactaaattatgtgattttctcaaattatta 14731720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 34897135 - 34897085
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  34897135 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 750
Target Start/End: Original strand, 33405393 - 33405437
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaac 750  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  33405393 cacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 11927095 - 11927145
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  11927095 cacatataattacactgaattatgtgattttatcaaattattaacagtgtc 11927145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 13844605 - 13844647
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  13844605 cacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 748
Target Start/End: Original strand, 15816107 - 15816180
Alignment:
Q  677 cgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||| |||||| ||||| |||| ||||| |||  ||||||||||||||||||||||||||| | |||||||||    
T  15816107 cgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattatta 15816180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 24362211 - 24362261
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  24362211 cacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 2572031 - 2572107
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||| |||| ||||| ||||| |||  | ||||||||||||||||||||||||| | |||||||||    
T  2572031 acacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 756
Target Start/End: Complemental strand, 4611583 - 4611534
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 753
Target Start/End: Complemental strand, 13018329 - 13018284
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  13018329 catatcattacactaaattatgtgattttgtcaaattattaacggt 13018284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 20785474 - 20785523
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||| ||||||||||||||| || ||||||||| ||||||    
T  20785474 cacatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 748
Target Start/End: Complemental strand, 29776113 - 29776044
Alignment:
Q  679 tgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||| |||| |||  |||||| ||||||||||| ||| ||||| |||||||||| |||||||||    
T  29776113 tgttgtgtccgacactgacttaacaccgacatataattatactgaattacgtgattttctcaaattatta 29776044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 758
Target Start/End: Original strand, 12570517 - 12570569
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| | |||||||    
T  12570517 cacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaa 12570569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 750
Target Start/End: Original strand, 31580140 - 31580180
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaac 750  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  31580140 tataattacactcaattatgtgattttcttaaattattaac 31580180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 748
Target Start/End: Complemental strand, 14134746 - 14134707
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 748
Target Start/End: Complemental strand, 3025597 - 3025559
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 768
Target Start/End: Original strand, 7472524 - 7472586
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagt 768  Q
    |||||||||||||||||| |||||||||||  | |||||||||  |||||| || ||||||||    
T  7472524 cacatataattacactaatttatgtgatttctttaaattattagtggtgtcgaatatgtcagt 7472586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 11944715 - 11944665
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| | |||||||||||| | ||||||||||| |||||    
T  11944715 cacatataattacactgagttatgtgattttatcaaattattaacagtgtc 11944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Complemental strand, 24447076 - 24447034
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacg 24447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 27213597 - 27213555
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  27213597 cacatataattacagtgaattatgtgattttctgaaattatta 27213555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 31236586 - 31236628
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  31236586 cacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 34222997 - 34222955
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||| | |||||||||    
T  34222997 cacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 758
Target Start/End: Original strand, 12570746 - 12570795
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    ||||||||||||| ||||||| | |||||| ||||||||| |||||||||    
T  12570746 atataattacacttaattatgcgtttttcttaaattattagcggtgtcaa 12570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 757
Target Start/End: Complemental strand, 24669477 - 24669432
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtca 24669432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 746
Target Start/End: Complemental strand, 26529788 - 26529751
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattat 746  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  26529788 atataattaccctaaattatgtgattttctcaaattat 26529751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 739
Target Start/End: Original strand, 26902184 - 26902217
Alignment:
Q  706 cacatataattacactaaattatgtgattttcta 739  Q
    |||||||||||||||| |||||||||||||||||    
T  26902184 cacatataattacactgaattatgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 33382028 - 33382077
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||| || |||||||| ||||||| ||||||||| ||||||    
T  33382028 cacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 701 - 754
Target Start/End: Original strand, 37283814 - 37283867
Alignment:
Q  701 acacccacatataattacactaaattatgtgattttctaaaattattaacggtg 754  Q
    ||||| ||| ||||||||||| |||||||||||||||| | ||||||| |||||    
T  37283814 acaccgacacataattacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 32804549 - 32804599
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32804549 cacatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 706 - 753
Target Start/End: Original strand, 49505163 - 49505210
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  49505163 cacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 11313809 - 11313851
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  11313809 cacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 16192759 - 16192809
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  16192759 cacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 674 - 756
Target Start/End: Complemental strand, 25064991 - 25064909
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||| |||||| ||||| |||| | ||| ||| |||||||||||||||||||||||||| | |||| |||| |||||||    
T  25064991 acacgtgtcgtgtccgacaccaacacgataccaacacataattacactaaattatgtgattttttcaaatcattagcggtgtc 25064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 674 - 756
Target Start/End: Complemental strand, 55213046 - 55212963
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| || ||||||||||| |||| |||  | ||||| ||||||||||||||||||| ||||||||||||| |||||    
T  55213046 acacgtgttgtgcccgacaccgacaca-caccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtc 55212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 747
Target Start/End: Original strand, 15812799 - 15812871
Alignment:
Q  675 cacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatt 747  Q
    ||||||| |||||| ||||| |||| |||||  |||||||||||||| | |||||||||||||| ||||||||    
T  15812799 cacgtgtcgtgtccgacaccaacacgacaccggcatataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 689 - 749
Target Start/End: Complemental strand, 2731881 - 2731819
Alignment:
Q  689 aacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaa 749  Q
    ||||||||||||||||   |||||||||||||||| |||||||||||||||| ||| ||||||    
T  2731881 aacaccgacacaacacatacacatataattacacttaattatgtgattttcttaaagtattaa 2731819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 668 - 748
Target Start/End: Complemental strand, 11666034 - 11665952
Alignment:
Q  668 tatcaaacacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||| |||||||| ||||| |||| | |||| |||||  ||||||||||||||||||||| ||||||||| | |||||||||    
T  11666034 tatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 755
Target Start/End: Complemental strand, 4201443 - 4201397
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  4201443 atataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 7928500 - 7928450
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  7928500 cacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 755
Target Start/End: Original strand, 8039820 - 8039893
Alignment:
Q  684 tgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||| |||||||||| |||||  |||||||||||||||| |||||| | ||||||| ||||||||| ||||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 757
Target Start/End: Original strand, 34307737 - 34307840
Alignment:
Q  650 ggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaa 749  Q
    ||||||| ||||  ||| |||| || |||||| |||||| |||||||||| ||||     |||||||||||| || ||||||||||||| |||||||||     
T  34307737 ggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgacact----tataattacactgaaatatgtgattttctcaaattattag 34307832  T
Q  750 cggtgtca 757  Q
    ||||||||    
T  34307833 cggtgtca 34307840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 4987266 - 4987342
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||||||||||||||  |||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  4987266 acacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattatta 4987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 14209197 - 14209121
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||| |||||||||| ||||  |||  | |||||||||| |||||||||||||| |||||||||||    
T  14209197 acacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 755
Target Start/End: Original strand, 14840304 - 14840349
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgt 14840349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 756
Target Start/End: Original strand, 15796269 - 15796353
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| ||||| |||| ||||| |||  | |||||||||| |||||| ||||||| | ||||||||||| |||||    
T  15796269 acacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtc 15796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 27277852 - 27277889
Alignment:
Q  711 ataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattatta 27277889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 10124772 - 10124712
Alignment:
Q  356 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 416  Q
    |||||| || |||||||| ||||  |||| |||||||||| ||||||||||||||||||||    
T  10124772 aaaaatgtggttaattcaattgaatagataattaattcaactcacgttgaaaattatggtt 10124712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 10181204 - 10181144
Alignment:
Q  356 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 416  Q
    |||||| || |||||||| ||||  |||| |||||||||| ||||||||||||||||||||    
T  10181204 aaaaatgtggttaattcaattgaatagataattaattcaagtcacgttgaaaattatggtt 10181144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 756
Target Start/End: Original strand, 10268501 - 10268545
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtc 10268545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 756
Target Start/End: Original strand, 7614427 - 7614474
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||| ||| |||||||||||||||| ||||||||||| |||||    
T  7614427 atataattatactgaattatgtgattttcttaaattattaactgtgtc 7614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 756
Target Start/End: Complemental strand, 8842376 - 8842330
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||    
T  8842376 atataattacaccaaattatgtgattttc-aaaattattagcggtgtc 8842330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 756
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 701 - 748
Target Start/End: Complemental strand, 11252033 - 11251986
Alignment:
Q  701 acacccacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||| ||| ||||||||||| |||||||||||||||| |||||||||    
T  11252033 acaccgacacataattacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 745
Target Start/End: Original strand, 15314885 - 15314924
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaatta 745  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  15314885 cacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 753
Target Start/End: Complemental strand, 38731268 - 38731221
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    ||||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  38731268 cacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 678 - 748
Target Start/End: Original strand, 2620034 - 2620104
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||| ||||| ||||||| ||| ||||| ||| ||| ||||||| |||||||||||||||| |||| ||||    
T  2620034 gtgtcgtgtctaacaccgccacgacaccaacacatagttacacttaattatgtgattttctcaaatgatta 2620104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 756
Target Start/End: Complemental strand, 8383303 - 8383257
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||| ||||||||| ||||||||| |||||||    
T  8383303 tataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 25093552 - 25093502
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||| ||||||||||| |||| |||||| |||||    
T  25093552 cacatataattacactgaattgtgtgattttctcaaatcattaacagtgtc 25093502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 713 - 751
Target Start/End: Complemental strand, 28098181 - 28098143
Alignment:
Q  713 aattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  28098181 aattaccctaaattatgtgattttctaaaattatcaacg 28098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 48202278 - 48202320
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||| |||||||||||||||||| ||| |||||    
T  48202278 cacatataattacattaaattatgtgattttctcaaactatta 48202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 757
Target Start/End: Complemental strand, 1509583 - 1509538
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||||||||||||||||||| | ||||||||| | ||||||    
T  1509583 taattacactaaattatgtgattttttcaaattattagctgtgtca 1509538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 757
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||||||| | |||||||||||||||| ||||||||| | ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 751
Target Start/End: Complemental strand, 11658865 - 11658820
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  11658865 cacatataatcacactgaattatgcgattttctcaaattattaacg 11658820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 748
Target Start/End: Complemental strand, 12704056 - 12704015
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||| ||||||||| |||||| |||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattatta 12704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 17005594 - 17005670
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||| ||||  ||||| |||||||||| |||  |||||||||||| |||||| ||||||| | |||||||||    
T  17005594 acacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 8e-17; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 12713302 - 12713378
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  12713302 acacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattatta 12713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 12717393 - 12717469
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  12717393 acacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattatta 12717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 39953155 - 39953205
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  39953155 cacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 756
Target Start/End: Original strand, 34257922 - 34257969
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  34257922 atataattacactaaattatgtgattttattaaattattaacggtgtc 34257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 678 - 746
Target Start/End: Complemental strand, 44482310 - 44482240
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattat 746  Q
    |||| |||||| |||||||||| |||||  |||||||||||||||| |||||||||||||||| |||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 1864889 - 1864939
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  1864889 cacatataattacactgaattatgtgattttctcaaattattaactgtgtc 1864939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 12707848 - 12707924
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||| ||||||||||| ||||||||| |||||||||    
T  12707848 acacgtgttgtgtacgacaccgacataacaccaatacatataattgcactaaattatatgattttcttaaattatta 12707924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 707 - 748
Target Start/End: Original strand, 14332652 - 14332693
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 759
Target Start/End: Complemental strand, 25272528 - 25272479
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtcaaa 759  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  25272528 tataattacactaaattatgtgattttctcaaattgttaactgtgtcaaa 25272479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 679 - 756
Target Start/End: Complemental strand, 17754390 - 17754311
Alignment:
Q  679 tgttgtgtccaacaccgacacaacac--ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| ||||| | ||||||||| |||||||    
T  17754390 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 17754311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 706 - 749
Target Start/End: Original strand, 39130776 - 39130819
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaa 749  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  39130776 cacatataattacactaaattatataattttctaaaattattaa 39130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 2784606 - 2784556
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  2784606 cacatataattatactcaattatgtgattttcttaaatttttaacggtgtc 2784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 7918220 - 7918262
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  7918220 cacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 13997933 - 13997883
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||| | |||| ||||||||||||    
T  13997933 cacatataattacactgaattatgtgatttttttaaataattaacggtgtc 13997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 25098564 - 25098614
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||||||    
T  25098564 cacatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 683 - 746
Target Start/End: Complemental strand, 25361961 - 25361896
Alignment:
Q  683 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattat 746  Q
    |||||| |||||||||| ||||   |||||||||||||||| |||||||||||||||| |||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 756
Target Start/End: Original strand, 26238091 - 26238171
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| |||||||||| ||   ||||||| |||||||| |||||||| ||||||| ||||||||| |||||||    
T  26238091 acacgtgttgtgtccgacaccgacac-actgacacatat-attacactgaattatgttattttctcaaattattagcggtgtc 26238171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 757
Target Start/End: Complemental strand, 34371797 - 34371713
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||| || ||| ||||| |||| |||||  |||||||||||||||| ||||||||||||||||  |||||||| ||||||||    
T  34371797 acacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttct-caattattagcggtgtca 34371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 34712392 - 34712434
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  34712392 cacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 756
Target Start/End: Complemental strand, 36878507 - 36878461
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Complemental strand, 6427400 - 6427351
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  6427400 cacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 16164290 - 16164366
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||| |||||||||| |||| |||    |||||||||||||| |||||||||||||||| | |||||||||    
T  16164290 acacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 748
Target Start/End: Complemental strand, 40181920 - 40181879
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 746
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattat 746  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 742
Target Start/End: Complemental strand, 30749890 - 30749854
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30749890 cacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 742
Target Start/End: Complemental strand, 30771341 - 30771305
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30771341 cacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 756
Target Start/End: Original strand, 41877485 - 41877529
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtc 41877529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 683 - 748
Target Start/End: Original strand, 42004937 - 42004998
Alignment:
Q  683 gtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||| ||||||||||||||||    ||| ||||||||||||||||| ||||||| |||||||||    
T  42004937 gtgtccgacaccgacacaacacc----tatgattacactaaattatgtcattttctcaaattatta 42004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 772
Target Start/End: Original strand, 48148049 - 48148112
Alignment:
Q  709 atataattacactaaattatgtga-ttttctaaaattattaacggtgtcaaacatgtcagtatct 772  Q
    ||||||||||||| |||||| ||| |||| ||||||||||| ||||||| |||||||||||||||    
T  48148049 atataattacactgaattatatgatttttttaaaattattagcggtgtc-aacatgtcagtatct 48148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 683 - 755
Target Start/End: Complemental strand, 36906072 - 36905998
Alignment:
Q  683 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||| |||| |||||||| ||  ||||||||||||| || |||||||||||||||| | ||||||| ||||||    
T  36906072 gtgtccgacactgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 753
Target Start/End: Complemental strand, 52903299 - 52903252
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||||    
T  52903299 cacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 398778 - 398824
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||||||||||| | ||||||||| |||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 356 - 418
Target Start/End: Original strand, 8254402 - 8254464
Alignment:
Q  356 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggttaa 418  Q
    ||||||||| ||||||||  | ||  ||| ||||||||||||||||||||||||| |||||||    
T  8254402 aaaaatatggttaattcaacttagtggataattaattcaattcacgttgaaaattgtggttaa 8254464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 10233303 - 10233261
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| || ||||||    
T  10233303 cacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 12443469 - 12443511
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||| ||||||||| |||||||||||||||| |||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattatta 12443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 13436508 - 13436466
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  13436508 cacatataattacactgaattatgtgatttccttaaattatta 13436466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 17425102 - 17425152
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||| | |||||||||||||| | ||||||||| |||||||    
T  17425102 cacatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 17831540 - 17831590
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||| |||||||    
T  17831540 cacatatgattacactgaataatgtgattttctcaaattattagcggtgtc 17831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 20157359 - 20157409
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||| |||||||| |||||||||||||||| | ||||||| |||||||    
T  20157359 cacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 756
Target Start/End: Complemental strand, 21530735 - 21530689
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  21530735 tataattataccaaattatatgattttctcaaattattaacggtgtc 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 755
Target Start/End: Complemental strand, 28674847 - 28674801
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||| ||| |||||||| ||||||| ||||||||||||||||    
T  28674847 atataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 32724107 - 32724157
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||| |||||||||| | ||||| |||||||||||| ||||    
T  32724107 cacatataattacattaaattatgtaaatttctcaaattattaacgatgtc 32724157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 748
Target Start/End: Complemental strand, 34298482 - 34298444
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 35999331 - 35999373
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||| |||||||||| ||||||||| |||||||||    
T  35999331 cacatataattatactaaattatatgattttcttaaattatta 35999373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 38503370 - 38503320
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| || ||| ||||||||| ||||||||| |||||||    
T  38503370 cacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 755
Target Start/End: Complemental strand, 9709870 - 9709821
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||||   |||||||||||||||| ||||||||| ||||||    
T  9709870 cacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 9828128 - 9828052
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||  |||| ||||| |||||  |||||| ||||||||| |||||||||||||| | |||||||||    
T  9828128 acacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 748
Target Start/End: Original strand, 10572580 - 10572640
Alignment:
Q  690 acaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||| ||||||||||  ||||| |||||||||  |||||||||||||||| |||||||||    
T  10572580 acaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 750
Target Start/End: Complemental strand, 15323206 - 15323169
Alignment:
Q  713 aattacactaaattatgtgattttctaaaattattaac 750  Q
    |||||||||||||||||||||||| | |||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaac 15323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 746
Target Start/End: Original strand, 20131987 - 20132024
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattat 746  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  20131987 atataattaccctaaattatgtgattttctcaaattat 20132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 31242758 - 31242795
Alignment:
Q  381 agatgattaattcaattcacgttgaaaattatggttaa 418  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  31242758 agataattaattcgattcacgttgaaaattatggttaa 31242795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 748
Target Start/End: Original strand, 32461439 - 32461514
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||| ||||||||||| |||| |||  | |||||||| |||||||||||||||| | |||||||||    
T  32461439 acacgtgtcgtgtccgacaccgacaca-caccaacacttgtaattacattaaattatgtgattttttcaaattatta 32461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 742
Target Start/End: Original strand, 45534202 - 45534235
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaa 742  Q
    ||||| ||||||||||||||||||||||||||||    
T  45534202 atatacttacactaaattatgtgattttctaaaa 45534235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 678 - 748
Target Start/End: Complemental strand, 47989577 - 47989505
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  47989577 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 684 - 756
Target Start/End: Original strand, 29787356 - 29787428
Alignment:
Q  684 tgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||  ||||| ||| ||||||||||| |||||||||||||||| ||||||||| |||||||    
T  29787356 tgtccaacaccgacattacaccaacacataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 678 - 748
Target Start/End: Complemental strand, 15902902 - 15902830
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||| |||||| | ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 678 - 756
Target Start/End: Complemental strand, 32308200 - 32308120
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| ||||||||||||||||| ||||   |||||| ||||||||| |||||||||||||||| ||||||||| |||||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 708 - 756
Target Start/End: Original strand, 27093424 - 27093472
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 708 - 756
Target Start/End: Complemental strand, 27184877 - 27184829
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 706 - 757
Target Start/End: Complemental strand, 8160466 - 8160415
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  8160466 cacatataattacactaaattatgtaattttcttaaattattagcggtgtca 8160415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 682 - 757
Target Start/End: Complemental strand, 11700877 - 11700802
Alignment:
Q  682 tgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||| ||||||| |||||||  ||| ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  11700877 tgtgtccgacaccgagacaacacagacacataattacattgaattatgtgattttgtcaaattattaacggtgtca 11700802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 706 - 753
Target Start/End: Complemental strand, 17851481 - 17851434
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  17851481 cacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 1433504 - 1433454
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  1433504 cacatataattacaccaaatgatgtgattttctcaaattattaacggtgtc 1433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 2948733 - 2948683
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  2948733 cacatataattacactaaattacgtgattttctaaaattatcagcggtgtc 2948683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 695 - 750
Target Start/End: Complemental strand, 5233692 - 5233635
Alignment:
Q  695 gacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaac 750  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||    
T  5233692 gacacaacaccaacacatataattacactagattatgtgattttctcaaattattaac 5233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 742
Target Start/End: Original strand, 18213042 - 18213078
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213042 cacatataattacactaaattatgtgattttctaaaa 18213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 758
Target Start/End: Original strand, 27732248 - 27732300
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| ||||||    
T  27732248 cacatataattacactgaattatgtaattttcttaaattattaacgttgtcaa 27732300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 40101782 - 40101842
Alignment:
Q  356 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 416  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||    
T  40101782 aaaaacatgattaattcagttgagtagatggttaattcaattcaccttaaaaattatggtt 40101842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 3721143 - 3721101
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  3721143 cacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 7328700 - 7328742
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  7328700 cacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 16341546 - 16341504
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 20549841 - 20549791
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  20549841 cacatataattacactgaattacgtgattttctcaaattattagcggtgtc 20549791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 22602719 - 22602769
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||    
T  22602719 cacatataattacactgaattatgtgattttctcaaataatttacggtgtc 22602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 33384591 - 33384641
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||||||||||  |||||||| | |||||||||||||||    
T  33384591 cacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 756
Target Start/End: Complemental strand, 49088892 - 49088810
Alignment:
Q  672 aaacacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattat--gtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| ||||||| |||| |    |||||||||||| ||||||||||  |||||||| | |||||||||||||||||    
T  49088892 aaacacgtgttgtgttcaacaccaacacga----cacatataattatactaaattatacgtgatttttttaaattattaacggtgtc 49088810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 756
Target Start/End: Original strand, 26329357 - 26329441
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||| |||||  |||||||||| || ||  |||||||||||||||| |||| |||| |||||| |||||||||||| ||||    
T  26329357 acacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtc 26329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 754
Target Start/End: Original strand, 2425742 - 2425790
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtg 754  Q
    |||||||| || |||| |||||||||||||||| |||||||||||||||    
T  2425742 cacatatagttccacttaattatgtgattttctcaaattattaacggtg 2425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 748
Target Start/End: Original strand, 6630888 - 6630963
Alignment:
Q  675 cacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||| ||||| |||| ||| |  |||||||||||||||| ||||| |||| ||||| |||||||||    
T  6630888 cacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattatta 6630963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 758
Target Start/End: Original strand, 42720899 - 42720951
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    |||||||||||||| | |||||||||||||| | ||||||||| |||||||||    
T  42720899 cacatataattacatttaattatgtgattttttcaaattattagcggtgtcaa 42720951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 756
Target Start/End: Complemental strand, 5236033 - 5235986
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtc 5235986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 748
Target Start/End: Complemental strand, 24339724 - 24339650
Alignment:
Q  676 acgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  24339724 acgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 749
Target Start/End: Complemental strand, 38143273 - 38143230
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaa 749  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  38143273 cacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 5548726 - 5548676
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||| ||||||||| ||||||| | |||||||    
T  5548726 cacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 12278885 - 12278843
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  12278885 cacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 19206100 - 19206050
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| | | |||||||||||||||| ||||||||| |||||||    
T  19206100 cacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 22484075 - 22484025
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| ||| |||||||  ||||||||||||||||| |||||||    
T  22484075 cacatataattatactgaattatgcaattttctaaaattattagcggtgtc 22484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 22868092 - 22868050
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| | |||||||    
T  22868092 cacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 24146866 - 24146824
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||| | | ||||||||||||||||||||||||||    
T  24146866 cacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 690 - 756
Target Start/End: Complemental strand, 30731103 - 30731037
Alignment:
Q  690 acaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||| |||| ||||| ||| | ||||||||| |||||||||||||||| ||||||||  |||||||    
T  30731103 acaccaacacgacaccgacacacaattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 748
Target Start/End: Complemental strand, 2424659 - 2424622
Alignment:
Q  711 ataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 749
Target Start/End: Original strand, 9408349 - 9408386
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaa 749  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  9408349 taattacactaaattatgtgattttttcaaattattaa 9408386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 756
Target Start/End: Complemental strand, 23191945 - 23191896
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| |||||||||| || ||||||||||||| ||||||||| |||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 746
Target Start/End: Complemental strand, 35493460 - 35493423
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattat 746  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  35493460 atataattaccctaaattatgtgattttctcaaattat 35493423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 742
Target Start/End: Complemental strand, 39138491 - 39138458
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaa 742  Q
    ||||||||||||| ||||||||||||||||||||    
T  39138491 atataattacactgaattatgtgattttctaaaa 39138458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 674 - 775
Target Start/End: Original strand, 25038046 - 25038148
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatc 771  Q
    |||||||| |||||  ||||| |||||| ||| |||| |  |||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  25038046 acacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtc-aacgtgtcagtatc 25038144  T
Q  772 tgtg 775  Q
    ||||    
T  25038145 tgtg 25038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 5732519 - 5732569
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  5732519 cacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 7086845 - 7086803
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7086845 cacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 19040402 - 19040352
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  19040402 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 701 - 755
Target Start/End: Original strand, 31579229 - 31579283
Alignment:
Q  701 acacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  31579229 acaccgacacataattacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 678 - 756
Target Start/End: Original strand, 5970087 - 5970167
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| |||||| |||||||||| |||||||||| |  ||||||||| |||||||||||||| | ||||||||||| |||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 5970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 7265602 - 7265651
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  7265602 cacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 695 - 748
Target Start/End: Original strand, 8805570 - 8805623
Alignment:
Q  695 gacacaacacccacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  8805570 gacactacaccgacacataattacactaaattatgtgattttctcaaattatta 8805623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 16766781 - 16766705
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  16766781 acacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 16766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 757
Target Start/End: Complemental strand, 5462733 - 5462685
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtca 5462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 709 - 756
Target Start/End: Complemental strand, 9658926 - 9658879
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 674 - 742
Target Start/End: Original strand, 16488565 - 16488635
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||| |||||| |||||||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  16488565 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaa 16488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 710 - 757
Target Start/End: Original strand, 32511679 - 32511726
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgtca 32511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 9025503 - 9025545
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  9025503 cacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 9195763 - 9195805
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  9195763 cacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 10842582 - 10842532
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||| ||||||||||||||||||||||| | ||||||||| |||||||    
T  10842582 cacatatgattacactaaattatgtgattttttcaaattattagcggtgtc 10842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 10888983 - 10889033
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  10888983 cacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 17302397 - 17302355
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  17302397 cacatataattacacaaaattatgtgattttcttaaattatta 17302355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 17341677 - 17341723
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtc 17341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 7248442 - 7248366
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||| ||||||||||||||||||||| || ||  ||||||||||||| || ||||||||||||| || | |||||||    
T  7248442 acacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 7248366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 30866153 - 30866202
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  30866153 cacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 32298616 - 32298665
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  32298616 cacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 750
Target Start/End: Original strand, 4118304 - 4118386
Alignment:
Q  670 tcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaac 750  Q
    |||||||||| |||||||| |||| ||||||| ||| |||  | |||||||| | |||||||||||||| | |||||||||||    
T  4118304 tcaaacacgtattgtgtccgacactgacacaaaaccaacacttgtaattacatttaattatgtgattttttcaaattattaac 4118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 753
Target Start/End: Complemental strand, 9617484 - 9617437
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  9617484 cacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 705 - 755
Target Start/End: Complemental strand, 1532291 - 1532241
Alignment:
Q  705 ccacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||| ||||||    
T  1532291 ccacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 7151462 - 7151420
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||| | |||||||||    
T  7151462 cacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 7378029 - 7377979
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||| | |||||||||||||||| ||||| ||| |||||||    
T  7378029 cacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 678 - 756
Target Start/End: Complemental strand, 8714060 - 8713979
Alignment:
Q  678 gtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtga-ttttctaaaattattaacggtgtc 756  Q
    |||| |||||| |||||||||| |||||||||| |  ||||||||| |||||||||| |||| | ||||||||||| |||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtc 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 9027228 - 9027178
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||  |||||||||||| ||| ||||||||| |||||||    
T  9027228 cacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 9629433 - 9629383
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||| | |||||||||||||||| ||||||||  |||||||    
T  9629433 cacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 744
Target Start/End: Original strand, 11591879 - 11591917
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaatt 744  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  11591879 cacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 707 - 745
Target Start/End: Original strand, 13360382 - 13360420
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaatta 745  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 13851786 - 13851736
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| ||||| || ||||||| ||||||||| |||||||    
T  13851786 cacatataattacactgaattacgttattttctcaaattattagcggtgtc 13851736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 634 - 748
Target Start/End: Complemental strand, 17435324 - 17435207
Alignment:
Q  634 aagtacgg-cacttttcggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgt 730  Q
    |||||||| |||||||| |||||||||||   || | || ||||||||| |||||| ||| ||||| |||||  |||  | |||||||||| ||||||||    
T  17435324 aagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgt 17435225  T
Q  731 gattttctaaaattatta 748  Q
     ||||| |||||||||||    
T  17435224 aattttttaaaattatta 17435207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 24832638 - 24832596
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||||||||||  |||||||| |||||||||    
T  24832638 cacatataattacactaaattataagattttctcaaattatta 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 26178690 - 26178732
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||| ||||||||||||||||||||||| | |||||||||    
T  26178690 cacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 744
Target Start/End: Complemental strand, 26562739 - 26562701
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaatt 744  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  26562739 cacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 32248937 - 32248979
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||    
T  32248937 atataattaccctaaattatgtgattttttaaaattatcaacg 32248979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 707 - 757
Target Start/End: Original strand, 32320679 - 32320729
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||| ||| | |||||||||||||| | ||||||||||||||||||    
T  32320679 acatataatgacattgaattatgtgattttatcaaattattaacggtgtca 32320729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 713 - 755
Target Start/End: Original strand, 34447374 - 34447416
Alignment:
Q  713 aattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| ||||||| | ||||||||||||||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgt 34447416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 748
Target Start/End: Complemental strand, 9522959 - 9522899
Alignment:
Q  690 acaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  9522959 acaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 748
Target Start/End: Original strand, 24833243 - 24833284
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||| |||||||| || ||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttatta 24833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 748
Target Start/End: Original strand, 34073338 - 34073398
Alignment:
Q  690 acaccgacacaacacccac--atataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||| ||||| ||  ||||||||||||| ||||||| |||||||| |||||||||    
T  34073338 acaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 22440609 - 22440659
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 707 - 754
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggtg 754  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 5775367 - 5775417
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  5775367 cacatataattacacttaattatgtgattttctcaaattattaatggtgtc 5775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 746
Target Start/End: Complemental strand, 13134500 - 13134460
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattat 746  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  13134500 cacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 709 - 756
Target Start/End: Original strand, 21539879 - 21539926
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtc 21539926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 8423731 - 8423777
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 11931330 - 11931280
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||| |||||||||||||||||||||| | | |||||||||||||||    
T  11931330 cacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 36635374 - 36635332
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  36635374 cacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 40613500 - 40613450
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  40613500 cacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 40742641 - 40742591
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||| ||||||    
T  40742641 cacatataattacactagattatatgattttctcaaattattaatggtgtc 40742591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 708 - 748
Target Start/End: Original strand, 7214533 - 7214573
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 738
Target Start/End: Original strand, 10499279 - 10499311
Alignment:
Q  706 cacatataattacactaaattatgtgattttct 738  Q
    |||||||||||||||||||||||||||||||||    
T  10499279 cacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 356 - 420
Target Start/End: Original strand, 17471055 - 17471118
Alignment:
Q  356 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggttaatt 420  Q
    |||||||| ||||||| | || |||| ||||||||||||||||||||| |||||| |||||||||    
T  17471055 aaaaatattattaatttagttaagcaaatgattaattcaattcacgtt-aaaattgtggttaatt 17471118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 745
Target Start/End: Complemental strand, 17876205 - 17876166
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaatta 745  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  17876205 cacatatgattacactaaattatgtcattttctaaaatta 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 754
Target Start/End: Original strand, 30982853 - 30982935
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtg 754  Q
    |||||||| |||||  |||||||||| ||||| |||  |||||||||||| || ||||||||||||| |||| |||| |||||    
T  30982853 acacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 756
Target Start/End: Original strand, 38148702 - 38148784
Alignment:
Q  676 acgtgttgtgtccaacaccgacacaacacccacatataa--ttacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||| |||||||||||| |||| ||| | |||| |||  ||||||| |||||||||||||||| ||| ||||| |||||||    
T  38148702 acgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtc 38148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 742
Target Start/End: Original strand, 46083966 - 46084036
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||| |||||| | || ||||| |||||  ||||||||||||||||| |||||||||||| ||||||    
T  46083966 acacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgatttactaaaa 46084036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 999357 - 999399
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||| |||||| || |||||||||    
T  999357 cacatataattacactaaattatatgatttactcaaattatta 999399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Complemental strand, 3731250 - 3731208
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattatcaacg 3731208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 714 - 748
Target Start/End: Complemental strand, 17446113 - 17446079
Alignment:
Q  714 attacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||| |||||||||    
T  17446113 attacactaaattatgtgattttcttaaattatta 17446079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 736
Target Start/End: Original strand, 19500836 - 19500897
Alignment:
Q  677 cgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgatttt 736  Q
    ||||| |||||| |||||||||| |||||  ||||||||||||||||||| |||||| ||||    
T  19500836 cgtgtcgtgtccgacaccgacacgacaccatcacatataattacactaaaatatgtgttttt 19500897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 33950186 - 33950144
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||| |||||| |||||||||||||||||| |||||||||    
T  33950186 cacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 708 - 758
Target Start/End: Original strand, 40179647 - 40179697
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    |||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  40179647 catataattacactgaattatgtgattttttcaaactattaatggtgtcaa 40179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 48139314 - 48139264
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||| ||||||||| |||| ||| ||||||||||| |||||    
T  48139314 cacatataattacattaaattatgagattatctcaaattattaacagtgtc 48139264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 694 - 748
Target Start/End: Original strand, 49652969 - 49653023
Alignment:
Q  694 cgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||| ||||| ||||||||||| ||| |||||| ||||||||| |||||||||    
T  49652969 cgacacgacaccaacatataattatactgaattatctgattttcttaaattatta 49653023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 749
Target Start/End: Original strand, 6485626 - 6485663
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaa 749  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 755
Target Start/End: Complemental strand, 16189759 - 16189710
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||| ||||||    
T  16189759 cacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 743
Target Start/End: Complemental strand, 17344550 - 17344513
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaat 743  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  17344550 cacatataattacattaaattatgtgattttcttaaat 17344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 736
Target Start/End: Original strand, 22234865 - 22234929
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgatttt 736  Q
    |||||||| |||||  |||||||||| |||||  |||||| ||||||||| ||||||||||||||    
T  22234865 acacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 749
Target Start/End: Original strand, 27706192 - 27706229
Alignment:
Q  712 taattacactaaattatgtgattttctaaaattattaa 749  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaa 27706229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 751
Target Start/End: Original strand, 44081586 - 44081631
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||||||| |||||||| ||||||| | ||||||||||||    
T  44081586 cacatataattacattaaattatatgattttttcaaattattaacg 44081631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 674 - 756
Target Start/End: Complemental strand, 3966587 - 3966503
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||| |||||||||| |||| ||||| |||||  |||||||||||||||| |||| ||||||||||| ||||||||| |||||||    
T  3966587 acacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 674 - 756
Target Start/End: Complemental strand, 18592157 - 18592073
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||| |||||||||| |||||  |||||||||||||| | |||||||| ||||||| ||| ||||| |||||||    
T  18592157 acacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtc 18592073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 27144513 - 27144463
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  27144513 cacatataattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 674 - 756
Target Start/End: Complemental strand, 11686022 - 11685939
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||| |||||| ||||||| || |||||  |||||||||||||||||||||||| || ||||| ||||||||| |||||||    
T  11686022 acacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 706 - 755
Target Start/End: Complemental strand, 36838593 - 36838544
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  36838593 cacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 757
Target Start/End: Original strand, 24273038 - 24273090
Alignment:
Q  705 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  24273038 ccacatataattacactgaattatgtgattttctcaaattaataactgtgtca 24273090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 757
Target Start/End: Complemental strand, 24389176 - 24389124
Alignment:
Q  705 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  24389176 ccacatataattacactgaattatgtgattttctcaaattaataactgtgtca 24389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 748
Target Start/End: Complemental strand, 35017085 - 35017045
Alignment:
Q  708 catataattacactaaattatgtgattttctaaaattatta 748  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 706 - 757
Target Start/End: Original strand, 6471898 - 6471949
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||||||||||| |||||||||||||||| ||||||||| | ||||||    
T  6471898 cacatataattacactgaattatgtgattttctcaaattattagccgtgtca 6471949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 674 - 742
Target Start/End: Complemental strand, 21814345 - 21814275
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||| |||||| |||||||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  21814345 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaa 21814275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 7175028 - 7175078
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||  | ||||||||||||||||| |||||||||||||||||    
T  7175028 cacatataattatgccaaattatgtgattttctcaaattattaacggtgtc 7175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 16203804 - 16203846
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  16203804 cacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 28588687 - 28588733
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  28588687 tataattacactgaattatgtgattttctcaaattattaccggtgtc 28588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 756
Target Start/End: Original strand, 2577190 - 2577239
Alignment:
Q  707 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| |||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgtc 2577239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 21522834 - 21522758
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||| ||||| |||||||||||    
T  21522834 acacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21522758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 21533400 - 21533324
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||| ||||| |||||||||||    
T  21533400 acacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21533324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 30502397 - 30502446
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  30502397 cacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 30542740 - 30542789
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  30542740 cacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 746
Target Start/End: Complemental strand, 14873567 - 14873527
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattat 746  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  14873567 cacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 742
Target Start/End: Complemental strand, 39758322 - 39758286
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||||||||||| ||||||||||||||||||||    
T  39758322 cacatataattacactgaattatgtgattttctaaaa 39758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 742
Target Start/End: Complemental strand, 6401582 - 6401512
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 742  Q
    |||||||| |||||| |||| ||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  6401582 acacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgattttctaaaa 6401512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 748
Target Start/End: Complemental strand, 12927701 - 12927662
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattatta 12927662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 757
Target Start/End: Original strand, 23016002 - 23016049
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtca 757  Q
    |||||||||||| |||||||||||||||| |||| ||||||| |||||    
T  23016002 tataattacactgaattatgtgattttctcaaatgattaacgatgtca 23016049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 753
Target Start/End: Complemental strand, 30098372 - 30098329
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggt 753  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 23012417 - 23012459
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||| |||||||| ||||||||| |||||||||    
T  23012417 cacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 23221033 - 23220983
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||| || |||||||||||||||||||| | ||||||||| |||||||    
T  23221033 cacatatgataacactaaattatgtgattttatcaaattattagcggtgtc 23220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 28262408 - 28262450
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacg 751  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacg 28262450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 693 - 756
Target Start/End: Original strand, 38749557 - 38749622
Alignment:
Q  693 ccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||  |||||||||||||| | |||||||| ||||| | ||||||||| |||||||    
T  38749557 ccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtc 38749622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 41091266 - 41091308
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| |||||||||||||||| |||| ||||    
T  41091266 cacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 758
Target Start/End: Original strand, 17593734 - 17593783
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    ||||||||||||| ||||| |||||||||| ||||||||| |||| ||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagcggtttcaa 17593783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 679 - 756
Target Start/End: Complemental strand, 1114 - 1035
Alignment:
Q  679 tgttgtgtccaacaccgacacaacac--ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| ||||| | ||||||||| |||||||    
T  1114 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 758
Target Start/End: Original strand, 25781 - 25829
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtcaa 758  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||    
T  25781 tataattacactaaattatgtgattttctctaattattaaccgtgtcaa 25829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 695 - 756
Target Start/End: Complemental strand, 28913 - 28850
Alignment:
Q  695 gacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||  |||||||||||||| | ||||||| |||||||| |||||||||||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtc 28850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 99943 - 99893
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||||||||| | |||||||| ||||||||||||||||| |||||||    
T  99943 cacatataattacattgaattatgttattttctaaaattattatcggtgtc 99893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 755
Target Start/End: Complemental strand, 90890 - 90844
Alignment:
Q  709 atataattacactaaattatgtgattttctaaaattattaacggtgt 755  Q
    ||||||||||||| |||||| ||||||||| |||||||||| |||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgt 90844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 674 - 747
Target Start/End: Complemental strand, 53264 - 53189
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatt 747  Q
    ||||||||  ||||| ||||||||||  |||| |||  |||||||||||| |||||||||||||||| ||||||||    
T  53264 acacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 754
Target Start/End: Original strand, 68255 - 68299
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtg 754  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||    
T  68255 tataattatactaaattatatgattttctcaaattattaacggtg 68299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 748
Target Start/End: Original strand, 263341 - 263423
Alignment:
Q  668 tatcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 748  Q
    |||| ||||||||| |||||  |||||||||| ||||  |||  |||||||||||| ||||||||| |||||| |||||||||    
T  263341 tatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattatta 263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 756
Target Start/End: Complemental strand, 1690 - 1644
Alignment:
Q  710 tataattacactaaattatgtgattttctaaaattattaacggtgtc 756  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  1690 tataattataccaaattatatgattttctcaaattattaacggtgtc 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 9756 - 9798
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  9756 cacatataattacactgaattaagtgattttctcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 135321 - 135363
Alignment:
Q  706 cacatataattacactaaattatgtgattttctaaaattatta 748  Q
    |||||||||||||||  |||||||||||||||| |||||||||    
T  135321 cacatataattacacagaattatgtgattttctcaaattatta 135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 736
Target Start/End: Complemental strand, 241678 - 241614
Alignment:
Q  674 acacgtgttgtgtccaacaccgacacaacacccacat--ataattacactaaattatgtgatttt 736  Q
    |||||||| |||||| ||||| |||| ||||| |||   ||||||||||||||||||||||||||    
T  241678 acacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttt 241614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University