View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20944_low_2 (Length: 597)

Name: NF20944_low_2
Description: NF20944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20944_low_2
NF20944_low_2
[»] chr2 (33 HSPs)
chr2 (2-582)||(2665386-2665966)
chr2 (481-564)||(44860319-44860404)
chr2 (485-549)||(34784961-34785027)
chr2 (513-563)||(21616762-21616812)
chr2 (514-560)||(36281688-36281734)
chr2 (481-562)||(2331795-2331876)
chr2 (513-562)||(30527604-30527653)
chr2 (513-549)||(20922937-20922973)
chr2 (481-542)||(28524447-28524510)
chr2 (481-562)||(22084805-22084890)
chr2 (513-563)||(23718026-23718076)
chr2 (513-563)||(24105698-24105748)
chr2 (513-563)||(31808077-31808127)
chr2 (513-563)||(37411253-37411303)
chr2 (480-564)||(4207856-4207941)
chr2 (509-562)||(28412351-28412404)
chr2 (514-563)||(28677909-28677958)
chr2 (517-562)||(31018591-31018636)
chr2 (513-562)||(35449514-35449563)
chr2 (513-562)||(39279676-39279725)
chr2 (513-549)||(20242736-20242772)
chr2 (512-563)||(19573978-19574029)
chr2 (517-560)||(23921256-23921299)
chr2 (481-545)||(35056886-35056952)
chr2 (508-563)||(36409631-36409686)
chr2 (513-555)||(5367200-5367242)
chr2 (513-563)||(16069263-16069313)
chr2 (513-563)||(18276521-18276571)
chr2 (516-558)||(35191591-35191633)
chr2 (518-555)||(21782832-21782869)
chr2 (519-563)||(30404865-30404909)
chr2 (481-550)||(38355862-38355933)
chr2 (516-556)||(40361766-40361806)
[»] scaffold0123 (1 HSPs)
scaffold0123 (481-564)||(44500-44585)
[»] chr8 (39 HSPs)
chr8 (493-564)||(11803258-11803331)
chr8 (513-563)||(39954288-39954338)
chr8 (513-563)||(4786347-4786397)
chr8 (513-555)||(14731720-14731762)
chr8 (513-563)||(34897085-34897135)
chr8 (513-557)||(33405393-33405437)
chr8 (513-563)||(11927095-11927145)
chr8 (513-555)||(13844605-13844647)
chr8 (484-555)||(15816107-15816180)
chr8 (513-563)||(24362211-24362261)
chr8 (481-555)||(2572031-2572107)
chr8 (514-563)||(4611534-4611583)
chr8 (515-560)||(13018284-13018329)
chr8 (513-562)||(20785474-20785523)
chr8 (486-555)||(29776044-29776113)
chr8 (513-565)||(12570517-12570569)
chr8 (517-557)||(31580140-31580180)
chr8 (516-555)||(14134707-14134746)
chr8 (517-555)||(3025559-3025597)
chr8 (513-575)||(7472524-7472586)
chr8 (513-563)||(11944665-11944715)
chr8 (516-558)||(24447034-24447076)
chr8 (513-555)||(27213555-27213597)
chr8 (513-555)||(31236586-31236628)
chr8 (513-555)||(34222955-34222997)
chr8 (516-565)||(12570746-12570795)
chr8 (519-564)||(24669432-24669477)
chr8 (516-553)||(26529751-26529788)
chr8 (513-546)||(26902184-26902217)
chr8 (513-562)||(33382028-33382077)
chr8 (508-561)||(37283814-37283867)
chr8 (519-563)||(4298901-4298945)
chr8 (519-555)||(8342980-8343016)
chr8 (519-555)||(8343324-8343360)
chr8 (524-564)||(18067954-18067994)
chr8 (513-549)||(18964191-18964227)
chr8 (517-581)||(20679408-20679471)
chr8 (519-555)||(20873077-20873113)
chr8 (504-553)||(22493504-22493555)
[»] chr3 (43 HSPs)
chr3 (513-563)||(32804549-32804599)
chr3 (513-560)||(49505163-49505210)
chr3 (513-555)||(11313809-11313851)
chr3 (513-563)||(16192759-16192809)
chr3 (481-563)||(25064909-25064991)
chr3 (481-563)||(55212963-55213046)
chr3 (482-554)||(15812799-15812871)
chr3 (496-556)||(2731819-2731881)
chr3 (475-555)||(11665952-11666034)
chr3 (516-562)||(4201397-4201443)
chr3 (513-563)||(7928450-7928500)
chr3 (491-562)||(8039820-8039893)
chr3 (457-564)||(34307737-34307840)
chr3 (481-555)||(4987266-4987342)
chr3 (481-555)||(14209121-14209197)
chr3 (517-562)||(14840304-14840349)
chr3 (481-563)||(15796269-15796353)
chr3 (518-555)||(27277852-27277889)
chr3 (163-223)||(10124712-10124772)
chr3 (163-223)||(10181144-10181204)
chr3 (519-563)||(10268501-10268545)
chr3 (516-563)||(7614427-7614474)
chr3 (516-563)||(8842330-8842376)
chr3 (516-563)||(10690274-10690321)
chr3 (508-555)||(11251986-11252033)
chr3 (513-552)||(15314885-15314924)
chr3 (513-560)||(38731221-38731268)
chr3 (485-555)||(2620034-2620104)
chr3 (517-563)||(8383257-8383303)
chr3 (513-563)||(25093502-25093552)
chr3 (520-558)||(28098143-28098181)
chr3 (513-555)||(48202278-48202320)
chr3 (519-564)||(1509538-1509583)
chr3 (515-564)||(9624640-9624689)
chr3 (513-558)||(11658820-11658865)
chr3 (514-555)||(12704015-12704056)
chr3 (481-555)||(17005594-17005670)
chr3 (513-553)||(8789559-8789599)
chr3 (163-223)||(10029791-10029851)
chr3 (163-223)||(10257514-10257574)
chr3 (515-555)||(11493372-11493412)
chr3 (513-549)||(35222952-35222988)
chr3 (519-555)||(55401083-55401119)
[»] chr1 (62 HSPs)
chr1 (481-555)||(12713302-12713378)
chr1 (481-555)||(12717393-12717469)
chr1 (513-563)||(39953155-39953205)
chr1 (516-563)||(34257922-34257969)
chr1 (485-553)||(44482240-44482310)
chr1 (513-563)||(1864889-1864939)
chr1 (481-555)||(12707848-12707924)
chr1 (514-555)||(14332652-14332693)
chr1 (517-566)||(25272479-25272528)
chr1 (486-563)||(17754311-17754390)
chr1 (513-556)||(39130776-39130819)
chr1 (513-563)||(2784556-2784606)
chr1 (513-555)||(7918220-7918262)
chr1 (513-563)||(13997883-13997933)
chr1 (513-563)||(25098564-25098614)
chr1 (490-553)||(25361896-25361961)
chr1 (481-563)||(26238091-26238171)
chr1 (481-564)||(34371713-34371797)
chr1 (513-555)||(34712392-34712434)
chr1 (517-563)||(36878461-36878507)
chr1 (513-562)||(6427351-6427400)
chr1 (481-555)||(16164290-16164366)
chr1 (514-555)||(40181879-40181920)
chr1 (513-553)||(19324572-19324612)
chr1 (513-549)||(30749854-30749890)
chr1 (513-549)||(30771305-30771341)
chr1 (519-563)||(41877485-41877529)
chr1 (490-555)||(42004937-42004998)
chr1 (516-579)||(48148049-48148112)
chr1 (490-562)||(36905998-36906072)
chr1 (513-560)||(52903252-52903299)
chr1 (517-563)||(398778-398824)
chr1 (163-225)||(8254402-8254464)
chr1 (513-555)||(10233261-10233303)
chr1 (513-555)||(12443469-12443511)
chr1 (513-555)||(13436466-13436508)
chr1 (513-563)||(17425102-17425152)
chr1 (513-563)||(17831540-17831590)
chr1 (513-563)||(20157359-20157409)
chr1 (517-563)||(21530689-21530735)
chr1 (516-562)||(28674801-28674847)
chr1 (513-563)||(32724107-32724157)
chr1 (517-555)||(34298444-34298482)
chr1 (513-555)||(35999331-35999373)
chr1 (513-563)||(38503320-38503370)
chr1 (513-562)||(9709821-9709870)
chr1 (481-555)||(9828052-9828128)
chr1 (497-555)||(10572580-10572640)
chr1 (520-557)||(15323169-15323206)
chr1 (516-553)||(20131987-20132024)
chr1 (188-225)||(31242758-31242795)
chr1 (481-555)||(32461439-32461514)
chr1 (516-549)||(45534202-45534235)
chr1 (485-555)||(47989505-47989577)
chr1 (523-563)||(2896140-2896180)
chr1 (515-563)||(5898277-5898325)
chr1 (519-555)||(22515902-22515938)
chr1 (519-555)||(22881631-22881667)
chr1 (481-546)||(25934633-25934700)
chr1 (513-564)||(29229460-29229512)
chr1 (519-555)||(31015051-31015087)
chr1 (519-555)||(37055871-37055907)
[»] chr7 (43 HSPs)
chr7 (491-563)||(29787356-29787428)
chr7 (485-555)||(15902830-15902902)
chr7 (485-563)||(32308120-32308200)
chr7 (515-563)||(27093424-27093472)
chr7 (515-563)||(27184829-27184877)
chr7 (513-564)||(8160415-8160466)
chr7 (489-564)||(11700802-11700877)
chr7 (513-560)||(17851434-17851481)
chr7 (513-563)||(1433454-1433504)
chr7 (513-563)||(2948683-2948733)
chr7 (502-557)||(5233635-5233692)
chr7 (513-549)||(18213042-18213078)
chr7 (513-565)||(27732248-27732300)
chr7 (163-223)||(40101782-40101842)
chr7 (513-555)||(3721101-3721143)
chr7 (513-555)||(7328700-7328742)
chr7 (513-555)||(16341504-16341546)
chr7 (513-563)||(20549791-20549841)
chr7 (513-563)||(22602719-22602769)
chr7 (513-563)||(33384591-33384641)
chr7 (479-563)||(49088810-49088892)
chr7 (481-563)||(26329357-26329441)
chr7 (513-561)||(2425742-2425790)
chr7 (482-555)||(6630888-6630963)
chr7 (513-565)||(42720899-42720951)
chr7 (516-563)||(5235986-5236033)
chr7 (483-555)||(24339650-24339724)
chr7 (513-556)||(38143230-38143273)
chr7 (513-563)||(5548676-5548726)
chr7 (513-555)||(12278843-12278885)
chr7 (513-563)||(19206050-19206100)
chr7 (513-563)||(22484025-22484075)
chr7 (513-555)||(22868050-22868092)
chr7 (513-555)||(24146824-24146866)
chr7 (497-563)||(30731037-30731103)
chr7 (518-555)||(2424622-2424659)
chr7 (519-556)||(9408349-9408386)
chr7 (514-563)||(23191896-23191945)
chr7 (516-553)||(35493423-35493460)
chr7 (516-549)||(39138458-39138491)
chr7 (513-553)||(9482944-9482984)
chr7 (515-563)||(10377507-10377555)
chr7 (515-543)||(41020516-41020544)
[»] chr6 (51 HSPs)
chr6 (481-582)||(25038046-25038148)
chr6 (513-563)||(5732519-5732569)
chr6 (513-555)||(7086803-7086845)
chr6 (513-563)||(19040352-19040402)
chr6 (508-562)||(31579229-31579283)
chr6 (485-563)||(5970087-5970167)
chr6 (513-562)||(7265602-7265651)
chr6 (502-555)||(8805570-8805623)
chr6 (481-555)||(16766705-16766781)
chr6 (516-564)||(5462685-5462733)
chr6 (516-563)||(9658879-9658926)
chr6 (481-549)||(16488565-16488635)
chr6 (517-564)||(32511679-32511726)
chr6 (513-555)||(9025503-9025545)
chr6 (513-555)||(9195763-9195805)
chr6 (513-563)||(10842532-10842582)
chr6 (513-563)||(10888983-10889033)
chr6 (513-555)||(17302355-17302397)
chr6 (517-563)||(17341677-17341723)
chr6 (481-555)||(7248366-7248442)
chr6 (513-562)||(30866153-30866202)
chr6 (513-562)||(32298616-32298665)
chr6 (477-557)||(4118304-4118386)
chr6 (513-560)||(9617437-9617484)
chr6 (512-562)||(1532241-1532291)
chr6 (513-555)||(7151420-7151462)
chr6 (513-563)||(7377979-7378029)
chr6 (485-563)||(8713979-8714060)
chr6 (513-563)||(9027178-9027228)
chr6 (513-563)||(9629383-9629433)
chr6 (513-551)||(11591879-11591917)
chr6 (514-552)||(13360382-13360420)
chr6 (513-563)||(13851736-13851786)
chr6 (441-555)||(17435207-17435324)
chr6 (513-555)||(24832596-24832638)
chr6 (513-555)||(26178690-26178732)
chr6 (513-551)||(26562701-26562739)
chr6 (516-558)||(32248937-32248979)
chr6 (514-564)||(32320679-32320729)
chr6 (520-562)||(34447374-34447416)
chr6 (497-555)||(9522899-9522959)
chr6 (514-555)||(24833243-24833284)
chr6 (497-555)||(34073338-34073398)
chr6 (515-563)||(677837-677885)
chr6 (515-555)||(7996389-7996429)
chr6 (515-555)||(8022372-8022412)
chr6 (513-565)||(14721239-14721291)
chr6 (513-545)||(17327664-17327696)
chr6 (519-555)||(17841604-17841640)
chr6 (513-565)||(21885790-21885842)
chr6 (519-555)||(25096431-25096467)
[»] chr4 (35 HSPs)
chr4 (513-563)||(22440609-22440659)
chr4 (514-561)||(903924-903971)
chr4 (513-563)||(5775367-5775417)
chr4 (513-553)||(13134460-13134500)
chr4 (516-563)||(21539879-21539926)
chr4 (517-563)||(8423731-8423777)
chr4 (513-563)||(11931280-11931330)
chr4 (513-555)||(36635332-36635374)
chr4 (513-563)||(40613450-40613500)
chr4 (513-563)||(40742591-40742641)
chr4 (515-555)||(7214533-7214573)
chr4 (513-545)||(10499279-10499311)
chr4 (163-227)||(17471055-17471118)
chr4 (513-552)||(17876166-17876205)
chr4 (481-561)||(30982853-30982935)
chr4 (483-563)||(38148702-38148784)
chr4 (481-549)||(46083966-46084036)
chr4 (513-555)||(999357-999399)
chr4 (516-558)||(3731208-3731250)
chr4 (521-555)||(17446079-17446113)
chr4 (484-543)||(19500836-19500897)
chr4 (513-555)||(33950144-33950186)
chr4 (515-565)||(40179647-40179697)
chr4 (513-563)||(48139264-48139314)
chr4 (501-555)||(49652969-49653023)
chr4 (519-556)||(6485626-6485663)
chr4 (513-562)||(16189710-16189759)
chr4 (513-550)||(17344513-17344550)
chr4 (481-543)||(22234865-22234929)
chr4 (519-556)||(27706192-27706229)
chr4 (513-558)||(44081586-44081631)
chr4 (518-582)||(2234232-2234295)
chr4 (490-563)||(7012066-7012141)
chr4 (514-554)||(9996849-9996889)
chr4 (513-553)||(18576046-18576086)
[»] chr5 (35 HSPs)
chr5 (481-563)||(3966503-3966587)
chr5 (481-563)||(18592073-18592157)
chr5 (513-563)||(27144463-27144513)
chr5 (481-563)||(11685939-11686022)
chr5 (513-562)||(36838544-36838593)
chr5 (512-564)||(24273038-24273090)
chr5 (512-564)||(24389124-24389176)
chr5 (515-555)||(35017045-35017085)
chr5 (513-564)||(6471898-6471949)
chr5 (481-549)||(21814275-21814345)
chr5 (513-563)||(7175028-7175078)
chr5 (513-555)||(16203804-16203846)
chr5 (517-563)||(28588687-28588733)
chr5 (514-563)||(2577190-2577239)
chr5 (481-555)||(21522758-21522834)
chr5 (481-555)||(21533324-21533400)
chr5 (513-562)||(30502397-30502446)
chr5 (513-562)||(30542740-30542789)
chr5 (513-553)||(14873527-14873567)
chr5 (513-549)||(39758286-39758322)
chr5 (481-549)||(6401512-6401582)
chr5 (516-555)||(12927662-12927701)
chr5 (517-564)||(23016002-23016049)
chr5 (517-560)||(30098329-30098372)
chr5 (513-555)||(23012417-23012459)
chr5 (513-563)||(23220983-23221033)
chr5 (516-558)||(28262408-28262450)
chr5 (500-563)||(38749557-38749622)
chr5 (513-555)||(41091266-41091308)
chr5 (516-565)||(17593734-17593783)
chr5 (519-555)||(14674277-14674313)
chr5 (513-553)||(18421850-18421890)
chr5 (513-557)||(19429438-19429482)
chr5 (519-555)||(19579709-19579745)
chr5 (519-555)||(33178033-33178069)
[»] scaffold1528 (1 HSPs)
scaffold1528 (486-563)||(1035-1114)
[»] scaffold0236 (1 HSPs)
scaffold0236 (517-565)||(25781-25829)
[»] scaffold0110 (1 HSPs)
scaffold0110 (502-563)||(28850-28913)
[»] scaffold0022 (2 HSPs)
scaffold0022 (513-563)||(99893-99943)
scaffold0022 (516-562)||(90844-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (481-554)||(53189-53264)
[»] scaffold0024 (1 HSPs)
scaffold0024 (517-561)||(68255-68299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (475-555)||(263341-263423)
[»] scaffold0697 (1 HSPs)
scaffold0697 (517-563)||(1644-1690)
[»] scaffold0036 (1 HSPs)
scaffold0036 (513-555)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (513-555)||(135321-135363)
[»] scaffold0003 (1 HSPs)
scaffold0003 (481-543)||(241614-241678)
[»] scaffold0136 (1 HSPs)
scaffold0136 (519-563)||(3864-3908)
[»] scaffold0027 (1 HSPs)
scaffold0027 (519-563)||(46682-46726)
[»] scaffold0018 (1 HSPs)
scaffold0018 (519-563)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (519-555)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 517; Significance: 0; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 517; E-Value: 0
Query Start/End: Original strand, 2 - 582
Target Start/End: Original strand, 2665386 - 2665966
Alignment:
Q  2 ttgggagtaggtgtgtatcttgagggtccagttctttttcttttcttatggaaagtcacataaaaggacattaggtgattaggttcaataacaccgactg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2665386 ttgggagtaggtgtgtatcttgagggtccagttctttttcttttcttatggaaagtcacataaaaggacattaggtgattaggttcaataacaccaactg 2665485  T
Q  102 aactacgtaattgagcaataatatttgatggagacccacccgcgatatggttaatcatgcgaaaaatatgattaattcatttgagcagatgattaattca 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  2665486 aactacgtaattaagcaataatatttgatggagacccacccgcgatatggttaatcatgcgaaaaatatgattaattcatttgagtagatgatcaattca 2665585  T
Q  202 attcacgttgaaaattatggttaattgctagccacattgtttaacgtaattaaccagatgttgcggttgcgaccgtgtacaaaataggaatgtccatgta 301  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  2665586 attcacgttgaaaattatgcttaattgctagccacattgtttaacgtaattaaccagatgttgcggttgcgcccgtgtacaaaataggagtgtccatgta 2665685  T
Q  302 tttgatagttgagaaagtaactacggccaaatggaggaaataagggaacataagtttgaaattagtcaccacagattcatcttgttcgagggtttgatgt 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2665686 tttgatagttgagaaagtaactacggccaaatggaggaaataagggaacataagtttgaaattagtcaccacagattcatcttgttcgagggtttgatgt 2665785  T
Q  402 tgacagttttataataatcattgtatgtcgataactaccaagtacggcacttttcggattagacgtgcatcattatcaaacacgtgttgtgtccaacacc 501  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2665786 tgacagttttataataatcattgtacgtcgataactacgaagtacgacacttttcggattagacgtgcatcattatcaaacacgtgttgtgttcaacacc 2665885  T
Q  502 gacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgtg 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||| ||||||||    
T  2665886 gacacaacacccacatataattacactaaattatgtgattttctaaaattattagtggtgttagacatgtcactatctgtg 2665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 44860404 - 44860319
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||| ||| |||||||||||| |||| |||||  |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||    
T  44860404 acacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtca 44860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 34784961 - 34785027
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||| |||||| | |||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  34784961 gtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaa 34785027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 21616812 - 21616762
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  21616812 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 36281734 - 36281688
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggt 36281688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 562
Target Start/End: Complemental strand, 2331876 - 2331795
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||| |||| || |||| ||||| ||||| ||| |||| |||||| |||||||||||||||| |||||||||| |||||    
T  2331876 acacgtgctgtgcccgacactgacacgacaccgacacataaatacactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 30527604 - 30527653
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  30527604 cacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 20922937 - 20922973
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922937 cacatataattacactaaattatgtgattttctaaaa 20922973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 542
Target Start/End: Complemental strand, 28524510 - 28524447
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattt 542  Q
    ||||||||||||||| ||||| |||||||| |  |||||||||||||||| |||||||||||||    
T  28524510 acacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 562
Target Start/End: Original strand, 22084805 - 22084890
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataa--ttacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||||| |||| ||||| | |||  |||||||||  ||||||| |||||| ||||||||| ||||||||||||||||    
T  22084805 acacgtgttgtgtccgacactgacacgataccggcacatataaaattacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 23718076 - 23718026
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  23718076 cacatataattacactgaattatgtgactttctcaaattattagcggtgtc 23718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 24105748 - 24105698
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  24105748 cacatataattacactgaattatgtgactttctcaaattattagcggtgtc 24105698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 31808127 - 31808077
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  31808127 cacatataattacactgaattatgtgattttgttaaattattagcggtgtc 31808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 37411253 - 37411303
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  37411253 cacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 564
Target Start/End: Complemental strand, 4207941 - 4207856
Alignment:
Q  480 aacacgtgttgtgtccaacaccgacacaacacccaca-tataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||| |||||| |||||||||| | ||| ||| |||||||||||||||||||| | |||| | |||||||||  |||||||    
T  4207941 aacacgtgtcgtgtccgacaccgacacgataccgacaatataattacactaaattatgcgcttttttcaaattattagtggtgtca 4207856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 509 - 562
Target Start/End: Complemental strand, 28412404 - 28412351
Alignment:
Q  509 cacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||    
T  28412404 caccgacacataattacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 514 - 563
Target Start/End: Complemental strand, 28677958 - 28677909
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 31018636 - 31018591
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||||    
T  31018636 tataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 35449563 - 35449514
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| ||||    
T  35449563 cacatataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 39279725 - 39279676
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||||||    
T  39279725 cacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 20242736 - 20242772
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20242736 cacatataattacactgaattatgtgattttctaaaa 20242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 563
Target Start/End: Complemental strand, 19574029 - 19573978
Alignment:
Q  512 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| |||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  19574029 ccacctataattacactgaattatgttattttcttaaattattatcggtgtc 19573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 560
Target Start/End: Complemental strand, 23921299 - 23921256
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 545
Target Start/End: Complemental strand, 35056952 - 35056886
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttct 545  Q
    |||||||| |||||| |||||||||| |||||  |||||||||||||||| |||||| || ||||||    
T  35056952 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 563
Target Start/End: Original strand, 36409631 - 36409686
Alignment:
Q  508 acacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||| | |||||||    
T  36409631 acaccgacacataattacactaaattatgtgattttttcaaattatcagcggtgtc 36409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 5367242 - 5367200
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  5367242 cacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 16069263 - 16069313
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| ||||||||||| |||||| ||||||| | |||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtc 16069313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 18276571 - 18276521
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  18276571 cacacataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 35191591 - 35191633
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  35191591 atataattaccctaaattatgtgattttctcaaattatcaacg 35191633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 21782832 - 21782869
Alignment:
Q  518 ataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattatta 21782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 30404865 - 30404909
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtc 30404909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 550
Target Start/End: Original strand, 38355862 - 38355933
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaat 550  Q
    ||||||||||| ||||||||| | |  |||||  |||||||||| ||||| |||||||||||||||| ||||    
T  38355862 acacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 40361766 - 40361806
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaa 556  Q
    |||||||||||||||||||||| ||||| | ||||||||||    
T  40361766 atataattacactaaattatgtaattttttcaaattattaa 40361806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 481 - 564
Target Start/End: Original strand, 44500 - 44585
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  44500 acacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtca 44585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 564
Target Start/End: Complemental strand, 11803331 - 11803258
Alignment:
Q  493 tccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  11803331 tccaacaccaacacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtca 11803258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 39954288 - 39954338
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 4786347 - 4786397
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  4786347 cacatataattacactgaattatgtgattttcttaaattattaatggtgtc 4786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 14731762 - 14731720
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14731762 cacatataattacactaaattatgtgattttctcaaattatta 14731720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 34897135 - 34897085
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  34897135 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 33405393 - 33405437
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaac 557  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  33405393 cacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 11927095 - 11927145
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  11927095 cacatataattacactgaattatgtgattttatcaaattattaacagtgtc 11927145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 13844605 - 13844647
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  13844605 cacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 555
Target Start/End: Original strand, 15816107 - 15816180
Alignment:
Q  484 cgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||| |||||| ||||| |||| ||||| |||  ||||||||||||||||||||||||||| | |||||||||    
T  15816107 cgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattatta 15816180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 24362211 - 24362261
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  24362211 cacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 2572031 - 2572107
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||| |||| ||||| ||||| |||  | ||||||||||||||||||||||||| | |||||||||    
T  2572031 acacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 514 - 563
Target Start/End: Complemental strand, 4611583 - 4611534
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 13018329 - 13018284
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  13018329 catatcattacactaaattatgtgattttgtcaaattattaacggt 13018284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 20785474 - 20785523
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||| ||||||||||||||| || ||||||||| ||||||    
T  20785474 cacatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 555
Target Start/End: Complemental strand, 29776113 - 29776044
Alignment:
Q  486 tgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||| |||| |||  |||||| ||||||||||| ||| ||||| |||||||||| |||||||||    
T  29776113 tgttgtgtccgacactgacttaacaccgacatataattatactgaattacgtgattttctcaaattatta 29776044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 12570517 - 12570569
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| | |||||||    
T  12570517 cacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaa 12570569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 31580140 - 31580180
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaac 557  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  31580140 tataattacactcaattatgtgattttcttaaattattaac 31580180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Complemental strand, 14134746 - 14134707
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 3025597 - 3025559
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 7472524 - 7472586
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagt 575  Q
    |||||||||||||||||| |||||||||||  | |||||||||  |||||| || ||||||||    
T  7472524 cacatataattacactaatttatgtgatttctttaaattattagtggtgtcgaatatgtcagt 7472586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 11944715 - 11944665
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| | |||||||||||| | ||||||||||| |||||    
T  11944715 cacatataattacactgagttatgtgattttatcaaattattaacagtgtc 11944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 24447076 - 24447034
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacg 24447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 27213597 - 27213555
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  27213597 cacatataattacagtgaattatgtgattttctgaaattatta 27213555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 31236586 - 31236628
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  31236586 cacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 34222997 - 34222955
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||| | |||||||||    
T  34222997 cacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 565
Target Start/End: Original strand, 12570746 - 12570795
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    ||||||||||||| ||||||| | |||||| ||||||||| |||||||||    
T  12570746 atataattacacttaattatgcgtttttcttaaattattagcggtgtcaa 12570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 564
Target Start/End: Complemental strand, 24669477 - 24669432
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtca 24669432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 26529788 - 26529751
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  26529788 atataattaccctaaattatgtgattttctcaaattat 26529751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 546
Target Start/End: Original strand, 26902184 - 26902217
Alignment:
Q  513 cacatataattacactaaattatgtgattttcta 546  Q
    |||||||||||||||| |||||||||||||||||    
T  26902184 cacatataattacactgaattatgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 33382028 - 33382077
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||| || |||||||| ||||||| ||||||||| ||||||    
T  33382028 cacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 561
Target Start/End: Original strand, 37283814 - 37283867
Alignment:
Q  508 acacccacatataattacactaaattatgtgattttctaaaattattaacggtg 561  Q
    ||||| ||| ||||||||||| |||||||||||||||| | ||||||| |||||    
T  37283814 acaccgacacataattacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 4298901 - 4298945
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||    
T  4298901 taattacattaaattatgtgattttttcaaattattaactgtgtc 4298945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 8343016 - 8342980
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  8343016 taattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 8343360 - 8343324
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattatta 8343324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 524 - 564
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  524 acactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||| |||||||||||||||| ||||||||| ||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 18964227 - 18964191
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||| | ||||||||||||||||||||    
T  18964227 cacatataattacattgaattatgtgattttctaaaa 18964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 517 - 581
Target Start/End: Original strand, 20679408 - 20679471
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgt 581  Q
    |||||||||||| || ||||||||||||| |||||||||  ||||||  |||||||||| |||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtc-gacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 20873113 - 20873077
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  20873113 taattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 553
Target Start/End: Complemental strand, 22493555 - 22493504
Alignment:
Q  504 cacaacacccacatata--attacactaaattatgtgattttctaaaattat 553  Q
    ||||||||| |||||||  |||||||| |||||||||||||| |||||||||    
T  22493555 cacaacaccgacatatatgattacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 32804549 - 32804599
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32804549 cacatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 49505163 - 49505210
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  49505163 cacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 11313809 - 11313851
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  11313809 cacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 16192759 - 16192809
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  16192759 cacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 25064991 - 25064909
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| |||||| ||||| |||| | ||| ||| |||||||||||||||||||||||||| | |||| |||| |||||||    
T  25064991 acacgtgtcgtgtccgacaccaacacgataccaacacataattacactaaattatgtgattttttcaaatcattagcggtgtc 25064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 55213046 - 55212963
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| || ||||||||||| |||| |||  | ||||| ||||||||||||||||||| ||||||||||||| |||||    
T  55213046 acacgtgttgtgcccgacaccgacaca-caccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtc 55212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 15812799 - 15812871
Alignment:
Q  482 cacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatt 554  Q
    ||||||| |||||| ||||| |||| |||||  |||||||||||||| | |||||||||||||| ||||||||    
T  15812799 cacgtgtcgtgtccgacaccaacacgacaccggcatataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 496 - 556
Target Start/End: Complemental strand, 2731881 - 2731819
Alignment:
Q  496 aacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaa 556  Q
    ||||||||||||||||   |||||||||||||||| |||||||||||||||| ||| ||||||    
T  2731881 aacaccgacacaacacatacacatataattacacttaattatgtgattttcttaaagtattaa 2731819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 555
Target Start/End: Complemental strand, 11666034 - 11665952
Alignment:
Q  475 tatcaaacacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||| |||||||| ||||| |||| | |||| |||||  ||||||||||||||||||||| ||||||||| | |||||||||    
T  11666034 tatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 562
Target Start/End: Complemental strand, 4201443 - 4201397
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  4201443 atataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 7928500 - 7928450
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  7928500 cacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 562
Target Start/End: Original strand, 8039820 - 8039893
Alignment:
Q  491 tgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||| |||||||||| |||||  |||||||||||||||| |||||| | ||||||| ||||||||| ||||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 564
Target Start/End: Original strand, 34307737 - 34307840
Alignment:
Q  457 ggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaa 556  Q
    ||||||| ||||  ||| |||| || |||||| |||||| |||||||||| ||||     |||||||||||| || ||||||||||||| |||||||||     
T  34307737 ggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgacact----tataattacactgaaatatgtgattttctcaaattattag 34307832  T
Q  557 cggtgtca 564  Q
    ||||||||    
T  34307833 cggtgtca 34307840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 4987266 - 4987342
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||||||||||||||  |||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  4987266 acacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattatta 4987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 14209197 - 14209121
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||| |||||||||| ||||  |||  | |||||||||| |||||||||||||| |||||||||||    
T  14209197 acacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 14840304 - 14840349
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgt 14840349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 15796269 - 15796353
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| ||||| |||| ||||| |||  | |||||||||| |||||| ||||||| | ||||||||||| |||||    
T  15796269 acacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtc 15796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 27277852 - 27277889
Alignment:
Q  518 ataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattatta 27277889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 10124772 - 10124712
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 223  Q
    |||||| || |||||||| ||||  |||| |||||||||| ||||||||||||||||||||    
T  10124772 aaaaatgtggttaattcaattgaatagataattaattcaactcacgttgaaaattatggtt 10124712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 10181204 - 10181144
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 223  Q
    |||||| || |||||||| ||||  |||| |||||||||| ||||||||||||||||||||    
T  10181204 aaaaatgtggttaattcaattgaatagataattaattcaagtcacgttgaaaattatggtt 10181144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 10268501 - 10268545
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtc 10268545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 563
Target Start/End: Original strand, 7614427 - 7614474
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||| ||| |||||||||||||||| ||||||||||| |||||    
T  7614427 atataattatactgaattatgtgattttcttaaattattaactgtgtc 7614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 563
Target Start/End: Complemental strand, 8842376 - 8842330
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||    
T  8842376 atataattacaccaaattatgtgattttc-aaaattattagcggtgtc 8842330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 563
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 555
Target Start/End: Complemental strand, 11252033 - 11251986
Alignment:
Q  508 acacccacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||| ||| ||||||||||| |||||||||||||||| |||||||||    
T  11252033 acaccgacacataattacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 552
Target Start/End: Original strand, 15314885 - 15314924
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaatta 552  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  15314885 cacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 38731268 - 38731221
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    ||||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  38731268 cacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 555
Target Start/End: Original strand, 2620034 - 2620104
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||| ||||| ||||||| ||| ||||| ||| ||| ||||||| |||||||||||||||| |||| ||||    
T  2620034 gtgtcgtgtctaacaccgccacgacaccaacacatagttacacttaattatgtgattttctcaaatgatta 2620104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 563
Target Start/End: Complemental strand, 8383303 - 8383257
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||| ||||||||| ||||||||| |||||||    
T  8383303 tataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 25093552 - 25093502
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||| ||||||||||| |||| |||||| |||||    
T  25093552 cacatataattacactgaattgtgtgattttctcaaatcattaacagtgtc 25093502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 558
Target Start/End: Complemental strand, 28098181 - 28098143
Alignment:
Q  520 aattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  28098181 aattaccctaaattatgtgattttctaaaattatcaacg 28098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 48202278 - 48202320
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| |||||||||||||||||| ||| |||||    
T  48202278 cacatataattacattaaattatgtgattttctcaaactatta 48202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 564
Target Start/End: Complemental strand, 1509583 - 1509538
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||||||||||||||||||| | ||||||||| | ||||||    
T  1509583 taattacactaaattatgtgattttttcaaattattagctgtgtca 1509538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 564
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||||||| | |||||||||||||||| ||||||||| | ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 558
Target Start/End: Complemental strand, 11658865 - 11658820
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  11658865 cacatataatcacactgaattatgcgattttctcaaattattaacg 11658820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 555
Target Start/End: Complemental strand, 12704056 - 12704015
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||| ||||||||| |||||| |||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattatta 12704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 17005594 - 17005670
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||| ||||  ||||| |||||||||| |||  |||||||||||| |||||| ||||||| | |||||||||    
T  17005594 acacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 8789559 - 8789599
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  8789559 cacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 10029851 - 10029791
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 223  Q
    |||||| || |||||| | ||||  |||| |||||||||| ||||||||||||||||||||    
T  10029851 aaaaatgtggttaattgaattgaatagataattaattcaactcacgttgaaaattatggtt 10029791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 10257574 - 10257514
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 223  Q
    |||||| || |||||||| |||   |||| |||||||||| ||||||||||||||||||||    
T  10257574 aaaaatgtggttaattcaattggatagataattaattcaactcacgttgaaaattatggtt 10257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 555
Target Start/End: Original strand, 11493372 - 11493412
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| |||||||||||||||| | |||||||    
T  11493372 catataattacactgaattatgtgattttctcacattatta 11493412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 35222988 - 35222952
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35222988 cacatataattacattgaattatgtgattttctaaaa 35222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 55401119 - 55401083
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  55401119 taattacactaaattatgtgattttttcaaattatta 55401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 12713302 - 12713378
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  12713302 acacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattatta 12713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 12717393 - 12717469
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  12717393 acacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattatta 12717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 39953155 - 39953205
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  39953155 cacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 563
Target Start/End: Original strand, 34257922 - 34257969
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  34257922 atataattacactaaattatgtgattttattaaattattaacggtgtc 34257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 553
Target Start/End: Complemental strand, 44482310 - 44482240
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||| |||||| |||||||||| |||||  |||||||||||||||| |||||||||||||||| |||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 1864889 - 1864939
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  1864889 cacatataattacactgaattatgtgattttctcaaattattaactgtgtc 1864939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 12707848 - 12707924
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||| ||||||||||| ||||||||| |||||||||    
T  12707848 acacgtgttgtgtacgacaccgacataacaccaatacatataattgcactaaattatatgattttcttaaattatta 12707924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 555
Target Start/End: Original strand, 14332652 - 14332693
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 566
Target Start/End: Complemental strand, 25272528 - 25272479
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtcaaa 566  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  25272528 tataattacactaaattatgtgattttctcaaattgttaactgtgtcaaa 25272479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 563
Target Start/End: Complemental strand, 17754390 - 17754311
Alignment:
Q  486 tgttgtgtccaacaccgacacaacac--ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| ||||| | ||||||||| |||||||    
T  17754390 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 17754311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 556
Target Start/End: Original strand, 39130776 - 39130819
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaa 556  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  39130776 cacatataattacactaaattatataattttctaaaattattaa 39130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 2784606 - 2784556
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  2784606 cacatataattatactcaattatgtgattttcttaaatttttaacggtgtc 2784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 7918220 - 7918262
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  7918220 cacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 13997933 - 13997883
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||| | |||| ||||||||||||    
T  13997933 cacatataattacactgaattatgtgatttttttaaataattaacggtgtc 13997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 25098564 - 25098614
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||||||    
T  25098564 cacatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 25361961 - 25361896
Alignment:
Q  490 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||||| |||||||||| ||||   |||||||||||||||| |||||||||||||||| |||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 26238091 - 26238171
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| |||||||||| ||   ||||||| |||||||| |||||||| ||||||| ||||||||| |||||||    
T  26238091 acacgtgttgtgtccgacaccgacac-actgacacatat-attacactgaattatgttattttctcaaattattagcggtgtc 26238171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 34371797 - 34371713
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||| || ||| ||||| |||| |||||  |||||||||||||||| ||||||||||||||||  |||||||| ||||||||    
T  34371797 acacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttct-caattattagcggtgtca 34371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 34712392 - 34712434
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  34712392 cacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 563
Target Start/End: Complemental strand, 36878507 - 36878461
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 6427400 - 6427351
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  6427400 cacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 16164290 - 16164366
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||| |||||||||| |||| |||    |||||||||||||| |||||||||||||||| | |||||||||    
T  16164290 acacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 514 - 555
Target Start/End: Complemental strand, 40181920 - 40181879
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 30749890 - 30749854
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30749890 cacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 30771341 - 30771305
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30771341 cacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 41877485 - 41877529
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtc 41877529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 555
Target Start/End: Original strand, 42004937 - 42004998
Alignment:
Q  490 gtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||| ||||||||||||||||    ||| ||||||||||||||||| ||||||| |||||||||    
T  42004937 gtgtccgacaccgacacaacacc----tatgattacactaaattatgtcattttctcaaattatta 42004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 579
Target Start/End: Original strand, 48148049 - 48148112
Alignment:
Q  516 atataattacactaaattatgtga-ttttctaaaattattaacggtgtcaaacatgtcagtatct 579  Q
    ||||||||||||| |||||| ||| |||| ||||||||||| ||||||| |||||||||||||||    
T  48148049 atataattacactgaattatatgatttttttaaaattattagcggtgtc-aacatgtcagtatct 48148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 562
Target Start/End: Complemental strand, 36906072 - 36905998
Alignment:
Q  490 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||| |||| |||||||| ||  ||||||||||||| || |||||||||||||||| | ||||||| ||||||    
T  36906072 gtgtccgacactgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 52903299 - 52903252
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||||    
T  52903299 cacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 563
Target Start/End: Original strand, 398778 - 398824
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||||||||||| | ||||||||| |||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 8254402 - 8254464
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggttaa 225  Q
    ||||||||| ||||||||  | ||  ||| ||||||||||||||||||||||||| |||||||    
T  8254402 aaaaatatggttaattcaacttagtggataattaattcaattcacgttgaaaattgtggttaa 8254464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 10233303 - 10233261
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| || ||||||    
T  10233303 cacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 12443469 - 12443511
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||| ||||||||| |||||||||||||||| |||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattatta 12443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 13436508 - 13436466
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  13436508 cacatataattacactgaattatgtgatttccttaaattatta 13436466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 17425102 - 17425152
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| | |||||||||||||| | ||||||||| |||||||    
T  17425102 cacatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 17831540 - 17831590
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||| |||||||    
T  17831540 cacatatgattacactgaataatgtgattttctcaaattattagcggtgtc 17831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 20157359 - 20157409
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||| |||||||| |||||||||||||||| | ||||||| |||||||    
T  20157359 cacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 563
Target Start/End: Complemental strand, 21530735 - 21530689
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  21530735 tataattataccaaattatatgattttctcaaattattaacggtgtc 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 562
Target Start/End: Complemental strand, 28674847 - 28674801
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||| ||| |||||||| ||||||| ||||||||||||||||    
T  28674847 atataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 32724107 - 32724157
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| |||||||||| | ||||| |||||||||||| ||||    
T  32724107 cacatataattacattaaattatgtaaatttctcaaattattaacgatgtc 32724157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 34298482 - 34298444
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 35999331 - 35999373
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||| |||||||||| ||||||||| |||||||||    
T  35999331 cacatataattatactaaattatatgattttcttaaattatta 35999373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 38503370 - 38503320
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| || ||| ||||||||| ||||||||| |||||||    
T  38503370 cacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 9709870 - 9709821
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||||   |||||||||||||||| ||||||||| ||||||    
T  9709870 cacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 9828128 - 9828052
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||  |||| ||||| |||||  |||||| ||||||||| |||||||||||||| | |||||||||    
T  9828128 acacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 555
Target Start/End: Original strand, 10572580 - 10572640
Alignment:
Q  497 acaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||| ||||||||||  ||||| |||||||||  |||||||||||||||| |||||||||    
T  10572580 acaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 557
Target Start/End: Complemental strand, 15323206 - 15323169
Alignment:
Q  520 aattacactaaattatgtgattttctaaaattattaac 557  Q
    |||||||||||||||||||||||| | |||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaac 15323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 20131987 - 20132024
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  20131987 atataattaccctaaattatgtgattttctcaaattat 20132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 31242758 - 31242795
Alignment:
Q  188 agatgattaattcaattcacgttgaaaattatggttaa 225  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  31242758 agataattaattcgattcacgttgaaaattatggttaa 31242795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 32461439 - 32461514
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||| ||||||||||| |||| |||  | |||||||| |||||||||||||||| | |||||||||    
T  32461439 acacgtgtcgtgtccgacaccgacaca-caccaacacttgtaattacattaaattatgtgattttttcaaattatta 32461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 45534202 - 45534235
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaa 549  Q
    ||||| ||||||||||||||||||||||||||||    
T  45534202 atatacttacactaaattatgtgattttctaaaa 45534235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 555
Target Start/End: Complemental strand, 47989577 - 47989505
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  47989577 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 563
Target Start/End: Original strand, 2896140 - 2896180
Alignment:
Q  523 tacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||| |||||||||||||||| ||||||||| |||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtc 2896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 563
Target Start/End: Original strand, 5898277 - 5898325
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| |||||||||||||| | | ||||||| |||||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtc 5898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Original strand, 22515902 - 22515938
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  22515902 taattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Original strand, 22881631 - 22881667
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  22881631 taattacactaaattatgtgattttttcaaattatta 22881667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 25934700 - 25934633
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttcta 546  Q
    |||||||| |||||| |||||||||| | |||  ||||||||||||||||  ||| ||||||||||||    
T  25934700 acacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgattttcta 25934633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 564
Target Start/End: Complemental strand, 29229512 - 29229460
Alignment:
Q  513 cacatataattac-actaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||| | ||||||    
T  29229512 cacatataattaccactaaatcatgtgattttctcaaattattagcagtgtca 29229460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 31015087 - 31015051
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||| |||||||||||||||| |||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Original strand, 37055871 - 37055907
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattatta 37055907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 491 - 563
Target Start/End: Original strand, 29787356 - 29787428
Alignment:
Q  491 tgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||  ||||| ||| ||||||||||| |||||||||||||||| ||||||||| |||||||    
T  29787356 tgtccaacaccgacattacaccaacacataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 485 - 555
Target Start/End: Complemental strand, 15902902 - 15902830
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||| |||||| | ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 485 - 563
Target Start/End: Complemental strand, 32308200 - 32308120
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| ||||||||||||||||| ||||   |||||| ||||||||| |||||||||||||||| ||||||||| |||||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 515 - 563
Target Start/End: Original strand, 27093424 - 27093472
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 27184877 - 27184829
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 564
Target Start/End: Complemental strand, 8160466 - 8160415
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  8160466 cacatataattacactaaattatgtaattttcttaaattattagcggtgtca 8160415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 564
Target Start/End: Complemental strand, 11700877 - 11700802
Alignment:
Q  489 tgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||| ||||||| |||||||  ||| ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  11700877 tgtgtccgacaccgagacaacacagacacataattacattgaattatgtgattttgtcaaattattaacggtgtca 11700802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 17851481 - 17851434
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  17851481 cacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 1433504 - 1433454
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  1433504 cacatataattacaccaaatgatgtgattttctcaaattattaacggtgtc 1433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 2948733 - 2948683
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  2948733 cacatataattacactaaattacgtgattttctaaaattatcagcggtgtc 2948683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 502 - 557
Target Start/End: Complemental strand, 5233692 - 5233635
Alignment:
Q  502 gacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaac 557  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||    
T  5233692 gacacaacaccaacacatataattacactagattatgtgattttctcaaattattaac 5233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 18213042 - 18213078
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213042 cacatataattacactaaattatgtgattttctaaaa 18213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 27732248 - 27732300
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| ||||||    
T  27732248 cacatataattacactgaattatgtaattttcttaaattattaacgttgtcaa 27732300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 40101782 - 40101842
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggtt 223  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||    
T  40101782 aaaaacatgattaattcagttgagtagatggttaattcaattcaccttaaaaattatggtt 40101842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 3721143 - 3721101
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  3721143 cacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 7328700 - 7328742
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  7328700 cacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 16341546 - 16341504
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 20549841 - 20549791
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  20549841 cacatataattacactgaattacgtgattttctcaaattattagcggtgtc 20549791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 22602719 - 22602769
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||    
T  22602719 cacatataattacactgaattatgtgattttctcaaataatttacggtgtc 22602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 33384591 - 33384641
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||||||||||  |||||||| | |||||||||||||||    
T  33384591 cacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 563
Target Start/End: Complemental strand, 49088892 - 49088810
Alignment:
Q  479 aaacacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattat--gtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| ||||||| |||| |    |||||||||||| ||||||||||  |||||||| | |||||||||||||||||    
T  49088892 aaacacgtgttgtgttcaacaccaacacga----cacatataattatactaaattatacgtgatttttttaaattattaacggtgtc 49088810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 26329357 - 26329441
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| |||||  |||||||||| || ||  |||||||||||||||| |||| |||| |||||| |||||||||||| ||||    
T  26329357 acacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtc 26329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 561
Target Start/End: Original strand, 2425742 - 2425790
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtg 561  Q
    |||||||| || |||| |||||||||||||||| |||||||||||||||    
T  2425742 cacatatagttccacttaattatgtgattttctcaaattattaacggtg 2425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 6630888 - 6630963
Alignment:
Q  482 cacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| ||||| |||| ||| |  |||||||||||||||| ||||| |||| ||||| |||||||||    
T  6630888 cacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattatta 6630963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 42720899 - 42720951
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||||| | |||||||||||||| | ||||||||| |||||||||    
T  42720899 cacatataattacatttaattatgtgattttttcaaattattagcggtgtcaa 42720951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 563
Target Start/End: Complemental strand, 5236033 - 5235986
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtc 5235986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 555
Target Start/End: Complemental strand, 24339724 - 24339650
Alignment:
Q  483 acgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  24339724 acgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 556
Target Start/End: Complemental strand, 38143273 - 38143230
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaa 556  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  38143273 cacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 5548726 - 5548676
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||| ||||||||| ||||||| | |||||||    
T  5548726 cacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 12278885 - 12278843
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  12278885 cacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 19206100 - 19206050
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| | | |||||||||||||||| ||||||||| |||||||    
T  19206100 cacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 22484075 - 22484025
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| ||| |||||||  ||||||||||||||||| |||||||    
T  22484075 cacatataattatactgaattatgcaattttctaaaattattagcggtgtc 22484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 22868092 - 22868050
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| | |||||||    
T  22868092 cacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 24146866 - 24146824
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||| | | ||||||||||||||||||||||||||    
T  24146866 cacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 30731103 - 30731037
Alignment:
Q  497 acaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||| |||| ||||| ||| | ||||||||| |||||||||||||||| ||||||||  |||||||    
T  30731103 acaccaacacgacaccgacacacaattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 2424659 - 2424622
Alignment:
Q  518 ataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 9408349 - 9408386
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaa 556  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  9408349 taattacactaaattatgtgattttttcaaattattaa 9408386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 563
Target Start/End: Complemental strand, 23191945 - 23191896
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| |||||||||| || ||||||||||||| ||||||||| |||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 35493460 - 35493423
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  35493460 atataattaccctaaattatgtgattttctcaaattat 35493423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 39138491 - 39138458
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaa 549  Q
    ||||||||||||| ||||||||||||||||||||    
T  39138491 atataattacactgaattatgtgattttctaaaa 39138458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 9482984 - 9482944
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  9482984 cacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 10377555 - 10377507
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| |||||| ||||||||| | ||||||||| |||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtc 10377507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 543
Target Start/End: Complemental strand, 41020544 - 41020516
Alignment:
Q  515 catataattacactaaattatgtgatttt 543  Q
    |||||||||||||||||||||||||||||    
T  41020544 catataattacactaaattatgtgatttt 41020516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 25038046 - 25038148
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatc 578  Q
    |||||||| |||||  ||||| |||||| ||| |||| |  |||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  25038046 acacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtc-aacgtgtcagtatc 25038144  T
Q  579 tgtg 582  Q
    ||||    
T  25038145 tgtg 25038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 5732519 - 5732569
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  5732519 cacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 7086845 - 7086803
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7086845 cacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 19040402 - 19040352
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  19040402 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 508 - 562
Target Start/End: Original strand, 31579229 - 31579283
Alignment:
Q  508 acacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  31579229 acaccgacacataattacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 563
Target Start/End: Original strand, 5970087 - 5970167
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| |||||| |||||||||| |||||||||| |  ||||||||| |||||||||||||| | ||||||||||| |||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 5970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 7265602 - 7265651
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  7265602 cacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 555
Target Start/End: Original strand, 8805570 - 8805623
Alignment:
Q  502 gacacaacacccacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  8805570 gacactacaccgacacataattacactaaattatgtgattttctcaaattatta 8805623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 16766781 - 16766705
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  16766781 acacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 16766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 516 - 564
Target Start/End: Complemental strand, 5462733 - 5462685
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtca 5462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 563
Target Start/End: Complemental strand, 9658926 - 9658879
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 549
Target Start/End: Original strand, 16488565 - 16488635
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||| |||||| |||||||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  16488565 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaa 16488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 564
Target Start/End: Original strand, 32511679 - 32511726
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgtca 32511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 9025503 - 9025545
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  9025503 cacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 9195763 - 9195805
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  9195763 cacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 10842582 - 10842532
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||| ||||||||||||||||||||||| | ||||||||| |||||||    
T  10842582 cacatatgattacactaaattatgtgattttttcaaattattagcggtgtc 10842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 10888983 - 10889033
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  10888983 cacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 17302397 - 17302355
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  17302397 cacatataattacacaaaattatgtgattttcttaaattatta 17302355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 563
Target Start/End: Original strand, 17341677 - 17341723
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtc 17341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 7248442 - 7248366
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||| ||||||||||||||||||||| || ||  ||||||||||||| || ||||||||||||| || | |||||||    
T  7248442 acacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 7248366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 30866153 - 30866202
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  30866153 cacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 32298616 - 32298665
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  32298616 cacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 557
Target Start/End: Original strand, 4118304 - 4118386
Alignment:
Q  477 tcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaac 557  Q
    |||||||||| |||||||| |||| ||||||| ||| |||  | |||||||| | |||||||||||||| | |||||||||||    
T  4118304 tcaaacacgtattgtgtccgacactgacacaaaaccaacacttgtaattacatttaattatgtgattttttcaaattattaac 4118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 9617484 - 9617437
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  9617484 cacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 1532291 - 1532241
Alignment:
Q  512 ccacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||| ||||||    
T  1532291 ccacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 7151462 - 7151420
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||| | |||||||||    
T  7151462 cacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 7378029 - 7377979
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| | |||||||||||||||| ||||| ||| |||||||    
T  7378029 cacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 563
Target Start/End: Complemental strand, 8714060 - 8713979
Alignment:
Q  485 gtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtga-ttttctaaaattattaacggtgtc 563  Q
    |||| |||||| |||||||||| |||||||||| |  ||||||||| |||||||||| |||| | ||||||||||| |||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtc 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 9027228 - 9027178
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||  |||||||||||| ||| ||||||||| |||||||    
T  9027228 cacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 9629433 - 9629383
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| | |||||||||||||||| ||||||||  |||||||    
T  9629433 cacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 551
Target Start/End: Original strand, 11591879 - 11591917
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaatt 551  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  11591879 cacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 514 - 552
Target Start/End: Original strand, 13360382 - 13360420
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaatta 552  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 13851786 - 13851736
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| ||||| || ||||||| ||||||||| |||||||    
T  13851786 cacatataattacactgaattacgttattttctcaaattattagcggtgtc 13851736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 555
Target Start/End: Complemental strand, 17435324 - 17435207
Alignment:
Q  441 aagtacgg-cacttttcggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgt 537  Q
    |||||||| |||||||| |||||||||||   || | || ||||||||| |||||| ||| ||||| |||||  |||  | |||||||||| ||||||||    
T  17435324 aagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgt 17435225  T
Q  538 gattttctaaaattatta 555  Q
     ||||| |||||||||||    
T  17435224 aattttttaaaattatta 17435207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 24832638 - 24832596
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||||||||||  |||||||| |||||||||    
T  24832638 cacatataattacactaaattataagattttctcaaattatta 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 26178690 - 26178732
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||| ||||||||||||||||||||||| | |||||||||    
T  26178690 cacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 551
Target Start/End: Complemental strand, 26562739 - 26562701
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaatt 551  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  26562739 cacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 32248937 - 32248979
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||    
T  32248937 atataattaccctaaattatgtgattttttaaaattatcaacg 32248979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 514 - 564
Target Start/End: Original strand, 32320679 - 32320729
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||| ||| | |||||||||||||| | ||||||||||||||||||    
T  32320679 acatataatgacattgaattatgtgattttatcaaattattaacggtgtca 32320729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 562
Target Start/End: Original strand, 34447374 - 34447416
Alignment:
Q  520 aattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| ||||||| | ||||||||||||||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgt 34447416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 555
Target Start/End: Complemental strand, 9522959 - 9522899
Alignment:
Q  497 acaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  9522959 acaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 555
Target Start/End: Original strand, 24833243 - 24833284
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||| |||||||| || ||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttatta 24833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 555
Target Start/End: Original strand, 34073338 - 34073398
Alignment:
Q  497 acaccgacacaacacccac--atataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||| ||||| ||  ||||||||||||| ||||||| |||||||| |||||||||    
T  34073338 acaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 677885 - 677837
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||| ||||||| ||||| ||||||||| ||||||||||| |||||    
T  677885 catataaatacactatattatatgattttctcaaattattaacagtgtc 677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 555
Target Start/End: Original strand, 7996389 - 7996429
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  7996389 catataattacactgaattatatgattttctcaaattatta 7996429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 555
Target Start/End: Complemental strand, 8022412 - 8022372
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  8022412 catataattacactgaattatatgattttctcaaattatta 8022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 565
Target Start/End: Complemental strand, 14721291 - 14721239
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||| | | |||||||| ||||||| |||||||||| ||||||||    
T  14721291 cacatataattatagtgaattatgtaattttcttaaattattaatggtgtcaa 14721239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 545
Target Start/End: Original strand, 17327664 - 17327696
Alignment:
Q  513 cacatataattacactaaattatgtgattttct 545  Q
    |||||||| ||||||||||||||||||||||||    
T  17327664 cacatatagttacactaaattatgtgattttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Original strand, 17841604 - 17841640
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattatta 17841640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 565
Target Start/End: Complemental strand, 21885842 - 21885790
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||| | |||||||||| ||||| | ||||||||| |||||||||    
T  21885842 cacatataattagattaaattatgttatttttttaaattattatcggtgtcaa 21885790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 25096467 - 25096431
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  25096467 taattacactagattatgtgattttctcaaattatta 25096431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 22440609 - 22440659
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 514 - 561
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggtg 561  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 5775367 - 5775417
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  5775367 cacatataattacacttaattatgtgattttctcaaattattaatggtgtc 5775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 13134500 - 13134460
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  13134500 cacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 563
Target Start/End: Original strand, 21539879 - 21539926
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtc 21539926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 563
Target Start/End: Original strand, 8423731 - 8423777
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 11931330 - 11931280
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| |||||||||||||||||||||| | | |||||||||||||||    
T  11931330 cacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 36635374 - 36635332
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  36635374 cacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 40613500 - 40613450
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  40613500 cacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 40742641 - 40742591
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||| ||||||    
T  40742641 cacatataattacactagattatatgattttctcaaattattaatggtgtc 40742591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 515 - 555
Target Start/End: Original strand, 7214533 - 7214573
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 545
Target Start/End: Original strand, 10499279 - 10499311
Alignment:
Q  513 cacatataattacactaaattatgtgattttct 545  Q
    |||||||||||||||||||||||||||||||||    
T  10499279 cacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 17471055 - 17471118
Alignment:
Q  163 aaaaatatgattaattcatttgagcagatgattaattcaattcacgttgaaaattatggttaatt 227  Q
    |||||||| ||||||| | || |||| ||||||||||||||||||||| |||||| |||||||||    
T  17471055 aaaaatattattaatttagttaagcaaatgattaattcaattcacgtt-aaaattgtggttaatt 17471118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 552
Target Start/End: Complemental strand, 17876205 - 17876166
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaatta 552  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  17876205 cacatatgattacactaaattatgtcattttctaaaatta 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 561
Target Start/End: Original strand, 30982853 - 30982935
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtg 561  Q
    |||||||| |||||  |||||||||| ||||| |||  |||||||||||| || ||||||||||||| |||| |||| |||||    
T  30982853 acacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 563
Target Start/End: Original strand, 38148702 - 38148784
Alignment:
Q  483 acgtgttgtgtccaacaccgacacaacacccacatataa--ttacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||| |||||||||||| |||| ||| | |||| |||  ||||||| |||||||||||||||| ||| ||||| |||||||    
T  38148702 acgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtc 38148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 549
Target Start/End: Original strand, 46083966 - 46084036
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||| |||||| | || ||||| |||||  ||||||||||||||||| |||||||||||| ||||||    
T  46083966 acacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgatttactaaaa 46084036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 999357 - 999399
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||| |||||| || |||||||||    
T  999357 cacatataattacactaaattatatgatttactcaaattatta 999399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 3731250 - 3731208
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattatcaacg 3731208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 555
Target Start/End: Complemental strand, 17446113 - 17446079
Alignment:
Q  521 attacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| |||||||||    
T  17446113 attacactaaattatgtgattttcttaaattatta 17446079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 19500836 - 19500897
Alignment:
Q  484 cgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgatttt 543  Q
    ||||| |||||| |||||||||| |||||  ||||||||||||||||||| |||||| ||||    
T  19500836 cgtgtcgtgtccgacaccgacacgacaccatcacatataattacactaaaatatgtgttttt 19500897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 33950186 - 33950144
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||| |||||| |||||||||||||||||| |||||||||    
T  33950186 cacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 565
Target Start/End: Original strand, 40179647 - 40179697
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  40179647 catataattacactgaattatgtgattttttcaaactattaatggtgtcaa 40179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 48139314 - 48139264
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| ||||||||| |||| ||| ||||||||||| |||||    
T  48139314 cacatataattacattaaattatgagattatctcaaattattaacagtgtc 48139264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 555
Target Start/End: Original strand, 49652969 - 49653023
Alignment:
Q  501 cgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||| ||||| ||||||||||| ||| |||||| ||||||||| |||||||||    
T  49652969 cgacacgacaccaacatataattatactgaattatctgattttcttaaattatta 49653023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 6485626 - 6485663
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaa 556  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 16189759 - 16189710
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||| ||||||    
T  16189759 cacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 17344550 - 17344513
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaat 550  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  17344550 cacatataattacattaaattatgtgattttcttaaat 17344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 22234865 - 22234929
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgatttt 543  Q
    |||||||| |||||  |||||||||| |||||  |||||| ||||||||| ||||||||||||||    
T  22234865 acacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 27706192 - 27706229
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaa 556  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaa 27706229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 44081586 - 44081631
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||||||| |||||||| ||||||| | ||||||||||||    
T  44081586 cacatataattacattaaattatatgattttttcaaattattaacg 44081631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 2234295 - 2234232
Alignment:
Q  518 ataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgtg 582  Q
    ||||||||| | |||||||||||||||| ||||||| ||||||| | | | ||||||||||||||    
T  2234295 ataattacattgaattatgtgattttctcaaattatcaacggtgac-agcgtgtcagtatctgtg 2234232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 7012141 - 7012066
Alignment:
Q  490 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||| ||||||||||||||||   || ||| || ||||| |||||||| ||||||| ||||||||| |||||||    
T  7012141 gtgtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtc 7012066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 9996889 - 9996849
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattatt 554  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  9996889 acatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 18576046 - 18576086
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  18576046 cacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 3966587 - 3966503
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||| |||||||||| |||| ||||| |||||  |||||||||||||||| |||| ||||||||||| ||||||||| |||||||    
T  3966587 acacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 18592157 - 18592073
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||| |||||||||| |||||  |||||||||||||| | |||||||| ||||||| ||| ||||| |||||||    
T  18592157 acacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtc 18592073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 27144513 - 27144463
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  27144513 cacatataattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 11686022 - 11685939
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| |||||| ||||||| || |||||  |||||||||||||||||||||||| || ||||| ||||||||| |||||||    
T  11686022 acacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 36838593 - 36838544
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  36838593 cacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 564
Target Start/End: Original strand, 24273038 - 24273090
Alignment:
Q  512 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  24273038 ccacatataattacactgaattatgtgattttctcaaattaataactgtgtca 24273090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 564
Target Start/End: Complemental strand, 24389176 - 24389124
Alignment:
Q  512 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  24389176 ccacatataattacactgaattatgtgattttctcaaattaataactgtgtca 24389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 515 - 555
Target Start/End: Complemental strand, 35017085 - 35017045
Alignment:
Q  515 catataattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 564
Target Start/End: Original strand, 6471898 - 6471949
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||||||||||| |||||||||||||||| ||||||||| | ||||||    
T  6471898 cacatataattacactgaattatgtgattttctcaaattattagccgtgtca 6471949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 549
Target Start/End: Complemental strand, 21814345 - 21814275
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||| |||||| |||||||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  21814345 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaa 21814275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 7175028 - 7175078
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||  | ||||||||||||||||| |||||||||||||||||    
T  7175028 cacatataattatgccaaattatgtgattttctcaaattattaacggtgtc 7175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 16203804 - 16203846
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  16203804 cacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 563
Target Start/End: Original strand, 28588687 - 28588733
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  28588687 tataattacactgaattatgtgattttctcaaattattaccggtgtc 28588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 514 - 563
Target Start/End: Original strand, 2577190 - 2577239
Alignment:
Q  514 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| |||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgtc 2577239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 21522834 - 21522758
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||| ||||| |||||||||||    
T  21522834 acacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21522758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 21533400 - 21533324
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||| ||||| |||||||||||    
T  21533400 acacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21533324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 30502397 - 30502446
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  30502397 cacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 30542740 - 30542789
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  30542740 cacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 14873567 - 14873527
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  14873567 cacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 39758322 - 39758286
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||||||||||| ||||||||||||||||||||    
T  39758322 cacatataattacactgaattatgtgattttctaaaa 39758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 549
Target Start/End: Complemental strand, 6401582 - 6401512
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 549  Q
    |||||||| |||||| |||| ||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  6401582 acacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgattttctaaaa 6401512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Complemental strand, 12927701 - 12927662
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattatta 12927662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 564
Target Start/End: Original strand, 23016002 - 23016049
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtca 564  Q
    |||||||||||| |||||||||||||||| |||| ||||||| |||||    
T  23016002 tataattacactgaattatgtgattttctcaaatgattaacgatgtca 23016049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 560
Target Start/End: Complemental strand, 30098372 - 30098329
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggt 560  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 23012417 - 23012459
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||| |||||||| ||||||||| |||||||||    
T  23012417 cacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 23221033 - 23220983
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||| || |||||||||||||||||||| | ||||||||| |||||||    
T  23221033 cacatatgataacactaaattatgtgattttatcaaattattagcggtgtc 23220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 28262408 - 28262450
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacg 558  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacg 28262450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 563
Target Start/End: Original strand, 38749557 - 38749622
Alignment:
Q  500 ccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||  |||||||||||||| | |||||||| ||||| | ||||||||| |||||||    
T  38749557 ccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtc 38749622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 41091266 - 41091308
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| |||||||||||||||| |||| ||||    
T  41091266 cacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 565
Target Start/End: Original strand, 17593734 - 17593783
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    ||||||||||||| ||||| |||||||||| ||||||||| |||| ||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagcggtttcaa 17593783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 14674313 - 14674277
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattatta 14674277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 18421850 - 18421890
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattat 553  Q
    ||||||||||||||||  ||||||||||||||| |||||||    
T  18421850 cacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 19429482 - 19429438
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaac 557  Q
    |||| ||| ||||||||| |||||||||||||| |||||||||||    
T  19429482 cacagatatttacactaagttatgtgattttctcaaattattaac 19429438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 19579745 - 19579709
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  19579745 taattgcactaaattatgtgattttctcaaattatta 19579709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 33178069 - 33178033
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  33178069 taattacactaaattatgtgatttttttaaattatta 33178033  T

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Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 563
Target Start/End: Complemental strand, 1114 - 1035
Alignment:
Q  486 tgttgtgtccaacaccgacacaacac--ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| ||||| | ||||||||| |||||||    
T  1114 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 1035  T

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Target: scaffold0236 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 517 - 565
Target Start/End: Original strand, 25781 - 25829
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtcaa 565  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||    
T  25781 tataattacactaaattatgtgattttctctaattattaaccgtgtcaa 25829  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 563
Target Start/End: Complemental strand, 28913 - 28850
Alignment:
Q  502 gacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||  |||||||||||||| | ||||||| |||||||| |||||||||||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtc 28850  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 99943 - 99893
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||||||| | |||||||| ||||||||||||||||| |||||||    
T  99943 cacatataattacattgaattatgttattttctaaaattattatcggtgtc 99893  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 562
Target Start/End: Complemental strand, 90890 - 90844
Alignment:
Q  516 atataattacactaaattatgtgattttctaaaattattaacggtgt 562  Q
    ||||||||||||| |||||| ||||||||| |||||||||| |||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgt 90844  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 53264 - 53189
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatt 554  Q
    ||||||||  ||||| ||||||||||  |||| |||  |||||||||||| |||||||||||||||| ||||||||    
T  53264 acacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 517 - 561
Target Start/End: Original strand, 68255 - 68299
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtg 561  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||    
T  68255 tataattatactaaattatatgattttctcaaattattaacggtg 68299  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 555
Target Start/End: Original strand, 263341 - 263423
Alignment:
Q  475 tatcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 555  Q
    |||| ||||||||| |||||  |||||||||| ||||  |||  |||||||||||| ||||||||| |||||| |||||||||    
T  263341 tatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattatta 263423  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 563
Target Start/End: Complemental strand, 1690 - 1644
Alignment:
Q  517 tataattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  1690 tataattataccaaattatatgattttctcaaattattaacggtgtc 1644  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 9756 - 9798
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  9756 cacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 135321 - 135363
Alignment:
Q  513 cacatataattacactaaattatgtgattttctaaaattatta 555  Q
    |||||||||||||||  |||||||||||||||| |||||||||    
T  135321 cacatataattacacagaattatgtgattttctcaaattatta 135363  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 543
Target Start/End: Complemental strand, 241678 - 241614
Alignment:
Q  481 acacgtgttgtgtccaacaccgacacaacacccacat--ataattacactaaattatgtgatttt 543  Q
    |||||||| |||||| ||||| |||| ||||| |||   ||||||||||||||||||||||||||    
T  241678 acacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttt 241614  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 3864 - 3908
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtc 3908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 46726 - 46682
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtc 46682  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 192264 - 192308
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattattaacggtgtc 563  Q
    |||||||||  |||||||| ||||||| |||||||||||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtc 192308  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 555
Target Start/End: Original strand, 17764 - 17800
Alignment:
Q  519 taattacactaaattatgtgattttctaaaattatta 555  Q
    ||||||||||||||||||||||||| | |||||||||    
T  17764 taattacactaaattatgtgattttttcaaattatta 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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