View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20944_low_27 (Length: 266)
Name: NF20944_low_27
Description: NF20944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20944_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 44095676 - 44095917
Alignment:
| Q |
10 |
cgaagaatattgatcatgacatgagttagagtaaaatttcttcaagtattggtaatgttatggattgagcttttgggttgagccaagcataataccgcat |
109 |
Q |
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| T |
44095676 |
cgaataatattgatcatgacatgagttagagtaaaatttcttcaagtattggtaatgttatggattgagcttttgggttgagccaagcataataccgcat |
44095775 |
T |
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| Q |
110 |
ccattaaacatcacactatgacctattaggatatgcttcattttaaacctcttacactcctcaaatattatactaacctaaacgtaaaattgtttgcatg |
209 |
Q |
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| T |
44095776 |
ccattaaacatcacactatgacctattaggatatgcttcatcttaaacctcttacactcctcaaatattatactaacctaaacgtaaaattgtttgcatg |
44095875 |
T |
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| Q |
210 |
tagactctcatcatcgatcaccctcttcgacgtgaattatga |
251 |
Q |
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| T |
44095876 |
taggctctcatcatcgatcaccctcttcgacgtgaattatga |
44095917 |
T |
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