View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20944_low_35 (Length: 234)
Name: NF20944_low_35
Description: NF20944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20944_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 105787 - 105987
Alignment:
| Q |
18 |
atagcaagtaggaactaagaaaatagatagaaagtgggagtaaactaagaatagaaaatagaaaattaatatgacaatgatagagaaacagacacaaata |
117 |
Q |
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| T |
105787 |
atagcaagtaggaactaagaaaatagatagaaagtgggagtaaactaagaatagaaaatagaaaattaatatgacaatgatagagaaacagacacaaata |
105886 |
T |
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| Q |
118 |
atttatcagaacaacacgattacgatttgggaaggaccccaacacagcctcgcaacattttgaaagaaaaagaaattatattaaacaacccaagaagttt |
217 |
Q |
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| T |
105887 |
atttatcagaacaacacgattacgatttgggaaggaccccaacacagcctcgcaacattttgaaagaaaaagaaattatattaaacaacccaagaagttt |
105986 |
T |
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| Q |
218 |
t |
218 |
Q |
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| T |
105987 |
t |
105987 |
T |
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