View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20944_low_4 (Length: 548)

Name: NF20944_low_4
Description: NF20944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20944_low_4
NF20944_low_4
[»] chr7 (45 HSPs)
chr7 (1-154)||(1085618-1085775)
chr7 (2-153)||(14681510-14681663)
chr7 (1-147)||(7517579-7517729)
chr7 (1-119)||(40094815-40094933)
chr7 (4-154)||(30244272-30244426)
chr7 (4-119)||(30245079-30245194)
chr7 (2-119)||(29157565-29157682)
chr7 (5-118)||(37533406-37533519)
chr7 (8-119)||(34218075-34218186)
chr7 (9-119)||(11845198-11845308)
chr7 (2-104)||(22566718-22566820)
chr7 (1-147)||(36534795-36534943)
chr7 (1-154)||(23379-23536)
chr7 (4-119)||(45433243-45433358)
chr7 (4-119)||(45754718-45754832)
chr7 (1-119)||(7554024-7554142)
chr7 (10-104)||(19122740-19122833)
chr7 (1-103)||(36939790-36939892)
chr7 (1-119)||(24177434-24177552)
chr7 (1-103)||(40230348-40230450)
chr7 (2-119)||(22567080-22567196)
chr7 (2-103)||(37533067-37533168)
chr7 (5-119)||(24838742-24838857)
chr7 (1-104)||(41854634-41854736)
chr7 (1-103)||(43241494-43241596)
chr7 (4-154)||(6054562-6054716)
chr7 (5-97)||(41910657-41910749)
chr7 (4-154)||(47129097-47129251)
chr7 (2-104)||(16569196-16569298)
chr7 (2-104)||(16596364-16596466)
chr7 (1-58)||(30244700-30244757)
chr7 (1-58)||(30245493-30245550)
chr7 (1-58)||(30255338-30255395)
chr7 (1-102)||(36622959-36623060)
chr7 (4-104)||(45434638-45434738)
chr7 (5-119)||(9901648-9901760)
chr7 (7-104)||(30032572-30032669)
chr7 (1-58)||(36109019-36109076)
chr7 (1-116)||(118345-118460)
chr7 (1-104)||(8128497-8128600)
chr7 (1-52)||(40094502-40094553)
chr7 (1-90)||(28301613-28301702)
chr7 (73-154)||(28300255-28300340)
chr7 (7-57)||(44361566-44361616)
chr7 (1-104)||(1085304-1085408)
[»] chr4 (70 HSPs)
chr4 (1-154)||(36608661-36608818)
chr4 (2-154)||(50002426-50002582)
chr4 (4-101)||(36572021-36572118)
chr4 (1-119)||(4955356-4955474)
chr4 (4-154)||(39404020-39404174)
chr4 (5-104)||(50459724-50459823)
chr4 (1-153)||(25483335-25483491)
chr4 (2-104)||(49880160-49880262)
chr4 (1-154)||(22183264-22183421)
chr4 (4-119)||(34646688-34646803)
chr4 (1-100)||(52884694-52884793)
chr4 (1-100)||(52884886-52884985)
chr4 (1-115)||(2741070-2741184)
chr4 (2-119)||(6975495-6975612)
chr4 (2-119)||(50630794-50630911)
chr4 (2-119)||(55933163-55933280)
chr4 (1-154)||(2740699-2740854)
chr4 (1-117)||(10245919-10246034)
chr4 (4-154)||(36629239-36629393)
chr4 (1-119)||(3244490-3244608)
chr4 (1-103)||(51768115-51768217)
chr4 (4-154)||(39404400-39404554)
chr4 (1-104)||(3340806-3340909)
chr4 (4-99)||(41707523-41707618)
chr4 (1-96)||(49076510-49076605)
chr4 (1-104)||(54017649-54017752)
chr4 (8-58)||(20825842-20825892)
chr4 (1-119)||(22028000-22028118)
chr4 (464-514)||(37059964-37060014)
chr4 (2-104)||(41370357-41370459)
chr4 (5-104)||(49302907-49303008)
chr4 (11-104)||(44620362-44620455)
chr4 (4-154)||(39792860-39793014)
chr4 (1-104)||(1731701-1731804)
chr4 (1-104)||(3341127-3341230)
chr4 (1-119)||(54108914-54109029)
chr4 (23-154)||(54936217-54936351)
chr4 (17-119)||(45496820-45496922)
chr4 (1-58)||(3700364-3700421)
chr4 (3-104)||(16888870-16888971)
chr4 (2-119)||(32941162-32941279)
chr4 (342-411)||(37059598-37059666)
chr4 (23-104)||(44621023-44621104)
chr4 (15-154)||(48111698-48111841)
chr4 (216-263)||(37057914-37057961)
chr4 (1-104)||(44620659-44620761)
chr4 (1-104)||(54741232-54741335)
chr4 (1-104)||(54017756-54017861)
chr4 (1-58)||(4390201-4390258)
chr4 (1-50)||(45050600-45050649)
chr4 (1-58)||(49076930-49076987)
chr4 (218-266)||(12150412-12150460)
chr4 (2-54)||(50788087-50788139)
chr4 (4-55)||(45489434-45489485)
chr4 (25-119)||(18932788-18932882)
chr4 (12-58)||(54343101-54343147)
chr4 (3-104)||(16889590-16889691)
chr4 (1-119)||(22028408-22028528)
chr4 (1-58)||(44621425-44621482)
chr4 (72-154)||(23817681-23817767)
chr4 (4-103)||(40067045-40067145)
chr4 (4-119)||(43174508-43174624)
chr4 (10-58)||(44620304-44620352)
chr4 (434-473)||(37059666-37059705)
chr4 (1-83)||(10246346-10246428)
chr4 (8-54)||(20826223-20826269)
chr4 (1-119)||(28034228-28034346)
chr4 (60-101)||(30788276-30788317)
chr4 (7-99)||(760194-760286)
chr4 (2-104)||(54108538-54108639)
[»] chr2 (50 HSPs)
chr2 (4-119)||(15880265-15880380)
chr2 (2-154)||(14745669-14745825)
chr2 (2-104)||(962598-962700)
chr2 (2-119)||(36178646-36178763)
chr2 (4-119)||(6421387-6421502)
chr2 (1-119)||(35580765-35580882)
chr2 (2-104)||(36178325-36178427)
chr2 (2-104)||(37106188-37106290)
chr2 (2-119)||(5542666-5542783)
chr2 (2-119)||(37105924-37106041)
chr2 (2-119)||(41283516-41283633)
chr2 (2-154)||(42514649-42514805)
chr2 (2-119)||(14745335-14745452)
chr2 (5-104)||(12910231-12910330)
chr2 (4-119)||(36005921-36006035)
chr2 (9-119)||(15511536-15511646)
chr2 (2-118)||(5543040-5543156)
chr2 (1-118)||(38796660-38796779)
chr2 (1-104)||(33561507-33561610)
chr2 (1-119)||(28254278-28254396)
chr2 (1-78)||(1769891-1769968)
chr2 (1-58)||(36785665-36785722)
chr2 (1-104)||(7598227-7598330)
chr2 (1-104)||(16542448-16542551)
chr2 (1-104)||(28531370-28531473)
chr2 (1-104)||(31468806-31468905)
chr2 (1-99)||(37894753-37894851)
chr2 (1-119)||(40679670-40679788)
chr2 (4-58)||(40733885-40733939)
chr2 (1-58)||(7598608-7598665)
chr2 (1-58)||(29676902-29676959)
chr2 (5-58)||(31899528-31899581)
chr2 (7-104)||(33731653-33731750)
chr2 (1-58)||(38796320-38796377)
chr2 (1-151)||(37632602-37632756)
chr2 (4-119)||(5367457-5367572)
chr2 (2-97)||(12529091-12529186)
chr2 (4-97)||(6712978-6713071)
chr2 (1-120)||(30323463-30323582)
chr2 (13-103)||(40163429-40163520)
chr2 (4-119)||(40733519-40733634)
chr2 (4-50)||(6421306-6421352)
chr2 (26-104)||(31259672-31259750)
chr2 (1-53)||(16590887-16590940)
chr2 (23-104)||(36178227-36178308)
chr2 (4-116)||(29874067-29874179)
chr2 (1-104)||(37895117-37895220)
chr2 (18-154)||(6422126-6422266)
chr2 (1-119)||(30313177-30313294)
chr2 (1-37)||(3672718-3672754)
[»] chr5 (55 HSPs)
chr5 (436-514)||(15155408-15155486)
chr5 (4-147)||(26074614-26074761)
chr5 (1-154)||(36568571-36568726)
chr5 (1-154)||(35150006-35150162)
chr5 (1-119)||(15370098-15370216)
chr5 (4-152)||(18603124-18603276)
chr5 (4-154)||(42405600-42405752)
chr5 (3-118)||(299490-299605)
chr5 (1-154)||(40296317-40296474)
chr5 (1-119)||(13415801-13415919)
chr5 (2-152)||(624196-624350)
chr5 (4-149)||(26075168-26075318)
chr5 (1-104)||(12662708-12662811)
chr5 (5-154)||(25327938-25328091)
chr5 (2-154)||(6500451-6500606)
chr5 (2-104)||(32487394-32487495)
chr5 (2-154)||(36492219-36492375)
chr5 (1-147)||(26074155-26074305)
chr5 (4-119)||(26074822-26074938)
chr5 (8-104)||(41170640-41170736)
chr5 (9-104)||(11417033-11417128)
chr5 (1-119)||(3295056-3295173)
chr5 (2-154)||(6500823-6500978)
chr5 (4-104)||(6224198-6224298)
chr5 (2-148)||(26590918-26591068)
chr5 (5-154)||(3295347-3295498)
chr5 (2-119)||(9498695-9498812)
chr5 (2-119)||(29549296-29549413)
chr5 (4-154)||(1028519-1028673)
chr5 (7-119)||(38427553-38427664)
chr5 (12-119)||(34753066-34753173)
chr5 (2-154)||(27502038-27502194)
chr5 (1-119)||(41632781-41632899)
chr5 (32-154)||(35167840-35167966)
chr5 (1-44)||(35150746-35150789)
chr5 (1-44)||(35151037-35151080)
chr5 (2-119)||(623818-623935)
chr5 (357-410)||(15155353-15155405)
chr5 (5-104)||(41635247-41635346)
chr5 (2-100)||(5723851-5723949)
chr5 (39-116)||(19275566-19275642)
chr5 (4-97)||(42508614-42508707)
chr5 (2-42)||(5660298-5660338)
chr5 (43-103)||(6557104-6557164)
chr5 (39-119)||(15370439-15370519)
chr5 (1-97)||(31509622-31509718)
chr5 (5-85)||(35914852-35914932)
chr5 (4-58)||(300961-301015)
chr5 (4-58)||(7768852-7768906)
chr5 (216-266)||(15155030-15155079)
chr5 (4-54)||(39309686-39309736)
chr5 (5-58)||(6225047-6225100)
chr5 (4-104)||(13786057-13786157)
chr5 (3-104)||(36521952-36522053)
chr5 (4-97)||(42524719-42524811)
[»] chr3 (53 HSPs)
chr3 (1-119)||(29644622-29644740)
chr3 (1-119)||(29644943-29645061)
chr3 (1-119)||(42342429-42342547)
chr3 (3-154)||(53117977-53118131)
chr3 (4-154)||(37990641-37990795)
chr3 (2-118)||(39389070-39389186)
chr3 (1-154)||(33803254-33803411)
chr3 (1-154)||(54017818-54017975)
chr3 (1-119)||(12114603-12114721)
chr3 (1-104)||(15773191-15773294)
chr3 (4-119)||(25755396-25755511)
chr3 (4-103)||(35946524-35946623)
chr3 (1-154)||(42342092-42342249)
chr3 (4-119)||(52634678-52634792)
chr3 (1-119)||(45395694-45395812)
chr3 (2-119)||(22304569-22304686)
chr3 (4-119)||(32462941-32463057)
chr3 (1-154)||(15772853-15773010)
chr3 (1-104)||(21832399-21832502)
chr3 (4-119)||(43346832-43346947)
chr3 (1-154)||(54018200-54018357)
chr3 (4-119)||(32462599-32462715)
chr3 (2-104)||(50612503-50612610)
chr3 (1-149)||(9240148-9240300)
chr3 (5-146)||(11661954-11662099)
chr3 (1-154)||(41359767-41359920)
chr3 (1-58)||(31190016-31190073)
chr3 (4-159)||(37990974-37991133)
chr3 (2-57)||(22304246-22304301)
chr3 (1-154)||(25739427-25739584)
chr3 (1-104)||(32589703-32589805)
chr3 (2-154)||(44160549-44160702)
chr3 (1-119)||(8327903-8328021)
chr3 (11-104)||(39935011-39935104)
chr3 (1-58)||(43346649-43346706)
chr3 (1-104)||(1634370-1634474)
chr3 (4-119)||(49336728-49336843)
chr3 (2-53)||(51886561-51886612)
chr3 (1-154)||(53577363-53577520)
chr3 (5-94)||(7767380-7767469)
chr3 (4-119)||(45901715-45901831)
chr3 (9-119)||(3135114-3135224)
chr3 (4-58)||(3135563-3135617)
chr3 (2-104)||(4823655-4823757)
chr3 (12-98)||(42584884-42584970)
chr3 (1-119)||(47964559-47964677)
chr3 (1-119)||(47964956-47965074)
chr3 (1-58)||(39914251-39914308)
chr3 (2-58)||(37726504-37726560)
chr3 (87-154)||(7766785-7766854)
chr3 (4-58)||(11661537-11661591)
chr3 (4-58)||(33175766-33175820)
chr3 (32-119)||(33362336-33362421)
[»] chr1 (50 HSPs)
chr1 (1-154)||(3875333-3875490)
chr1 (4-119)||(17294579-17294694)
chr1 (4-119)||(26661563-26661678)
chr1 (2-119)||(41759483-41759600)
chr1 (2-103)||(44290882-44290983)
chr1 (3-119)||(3550721-3550837)
chr1 (4-154)||(34649440-34649594)
chr1 (1-154)||(41142371-41142529)
chr1 (1-119)||(39066241-39066359)
chr1 (2-104)||(44290514-44290616)
chr1 (10-119)||(14318875-14318984)
chr1 (2-119)||(32594757-32594874)
chr1 (4-119)||(26661939-26662054)
chr1 (2-104)||(5320021-5320123)
chr1 (2-154)||(29798199-29798355)
chr1 (1-119)||(34364924-34365042)
chr1 (7-154)||(3537601-3537752)
chr1 (3-104)||(40082408-40082508)
chr1 (2-153)||(48588491-48588646)
chr1 (4-154)||(11977282-11977436)
chr1 (12-119)||(5528795-5528902)
chr1 (1-104)||(31767217-31767320)
chr1 (1-104)||(41157374-41157477)
chr1 (1-119)||(22077536-22077654)
chr1 (5-119)||(50052064-50052178)
chr1 (1-118)||(41156990-41157107)
chr1 (4-104)||(38804411-38804511)
chr1 (1-104)||(34364506-34364609)
chr1 (1-154)||(37850602-37850759)
chr1 (1-96)||(41184489-41184584)
chr1 (1-119)||(24600355-24600473)
chr1 (2-58)||(3537249-3537305)
chr1 (4-119)||(37556113-37556228)
chr1 (2-119)||(44043813-44043935)
chr1 (1-104)||(66528-66631)
chr1 (8-119)||(5575110-5575221)
chr1 (1-119)||(1188629-1188747)
chr1 (1-58)||(45084381-45084438)
chr1 (1-49)||(35154150-35154198)
chr1 (2-150)||(24131994-24132143)
chr1 (1-121)||(66126-66248)
chr1 (5-119)||(37555733-37555846)
chr1 (2-55)||(45494083-45494137)
chr1 (67-154)||(11977009-11977100)
chr1 (3-119)||(22793279-22793396)
chr1 (1-53)||(4878802-4878854)
chr1 (6-104)||(9955911-9956011)
chr1 (1-119)||(19283496-19283614)
chr1 (1-118)||(22077871-22077987)
chr1 (1-54)||(50469187-50469240)
[»] chr6 (39 HSPs)
chr6 (2-154)||(29518503-29518659)
chr6 (2-154)||(29518920-29519076)
chr6 (2-154)||(32741179-32741335)
chr6 (7-104)||(32460636-32460733)
chr6 (4-104)||(2377756-2377856)
chr6 (4-119)||(16107680-16107795)
chr6 (1-103)||(593766-593868)
chr6 (5-119)||(1950226-1950340)
chr6 (2-154)||(2378126-2378282)
chr6 (1-119)||(2579913-2580031)
chr6 (2-104)||(35210204-35210306)
chr6 (2-119)||(1127360-1127477)
chr6 (2-119)||(3409259-3409376)
chr6 (1-148)||(10074371-10074522)
chr6 (2-154)||(14748344-14748496)
chr6 (2-119)||(3058226-3058343)
chr6 (8-154)||(16454913-16455063)
chr6 (4-118)||(2578485-2578598)
chr6 (6-119)||(3415462-3415575)
chr6 (1-159)||(10073613-10073773)
chr6 (4-93)||(16108065-16108154)
chr6 (2-118)||(1846748-1846864)
chr6 (4-154)||(16454577-16454731)
chr6 (8-103)||(9062407-9062501)
chr6 (1-119)||(6071131-6071249)
chr6 (1-103)||(10074048-10074150)
chr6 (2-104)||(26544049-26544151)
chr6 (2-154)||(3409660-3409816)
chr6 (1-119)||(8481926-8482043)
chr6 (17-98)||(2975567-2975648)
chr6 (4-154)||(5832029-5832182)
chr6 (1-100)||(5958663-5958762)
chr6 (4-58)||(2579207-2579261)
chr6 (5-119)||(6999837-6999951)
chr6 (8-104)||(2843560-2843657)
chr6 (2-98)||(10911565-10911662)
chr6 (7-103)||(2579549-2579645)
chr6 (69-119)||(12085075-12085125)
chr6 (87-154)||(12071693-12071764)
[»] chr8 (59 HSPs)
chr8 (2-119)||(3669687-3669804)
chr8 (4-154)||(3038292-3038446)
chr8 (4-119)||(30359273-30359388)
chr8 (4-119)||(34834878-34834993)
chr8 (5-119)||(147454-147568)
chr8 (1-154)||(9309354-9309510)
chr8 (1-118)||(45121952-45122069)
chr8 (1-151)||(9608744-9608898)
chr8 (4-100)||(25561876-25561972)
chr8 (1-119)||(45122098-45122216)
chr8 (1-104)||(45123005-45123106)
chr8 (27-118)||(9483229-9483320)
chr8 (2-119)||(3670060-3670177)
chr8 (4-154)||(1513917-1514071)
chr8 (1-104)||(6876918-6877022)
chr8 (4-119)||(30359611-30359726)
chr8 (4-154)||(40518071-40518227)
chr8 (2-154)||(5420651-5420807)
chr8 (9-98)||(9482666-9482755)
chr8 (1-98)||(41972157-41972254)
chr8 (26-119)||(45122648-45122741)
chr8 (2-119)||(30441081-30441202)
chr8 (4-104)||(34835211-34835311)
chr8 (4-104)||(37544546-37544646)
chr8 (4-104)||(40518584-40518684)
chr8 (9-104)||(70330-70425)
chr8 (1-104)||(8918820-8918923)
chr8 (5-104)||(43274835-43274934)
chr8 (2-104)||(1013927-1014029)
chr8 (5-92)||(3037776-3037865)
chr8 (4-101)||(8794113-8794210)
chr8 (1-118)||(9507776-9507898)
chr8 (12-104)||(18372050-18372142)
chr8 (6-58)||(18380119-18380171)
chr8 (2-119)||(20870614-20870733)
chr8 (4-119)||(33113408-33113523)
chr8 (1-119)||(4154707-4154825)
chr8 (12-58)||(25561746-25561792)
chr8 (2-51)||(6731904-6731953)
chr8 (5-58)||(18372358-18372411)
chr8 (5-58)||(18372801-18372854)
chr8 (9-58)||(41416273-41416322)
chr8 (1-100)||(9308976-9309077)
chr8 (4-104)||(18372662-18372758)
chr8 (4-118)||(40579548-40579662)
chr8 (2-119)||(1014286-1014403)
chr8 (1-53)||(147828-147880)
chr8 (39-119)||(9609122-9609202)
chr8 (6-58)||(18373033-18373085)
chr8 (5-53)||(32640634-32640682)
chr8 (1-104)||(5274774-5274877)
chr8 (70-104)||(12156714-12156748)
chr8 (7-57)||(20130454-20130504)
chr8 (4-58)||(45121758-45121811)
chr8 (5-46)||(18372485-18372526)
chr8 (4-104)||(34835476-34835577)
chr8 (4-104)||(34835742-34835843)
chr8 (9-53)||(18371763-18371807)
chr8 (32-116)||(32305507-32305591)
[»] scaffold0702 (2 HSPs)
scaffold0702 (4-104)||(570-670)
scaffold0702 (2-58)||(244-300)
[»] scaffold0391 (3 HSPs)
scaffold0391 (4-104)||(1162-1262)
scaffold0391 (1-53)||(3092-3144)
scaffold0391 (49-119)||(1732-1802)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-119)||(5356-5474)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-92)||(5776-5867)
scaffold0734 (1-119)||(5395-5514)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-97)||(17519-17615)
[»] scaffold0504 (1 HSPs)
scaffold0504 (4-58)||(10213-10267)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-103)||(47359-47461)


Alignment Details
Target: chr7 (Bit Score: 76; Significance: 7e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 1085775 - 1085618
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| |||  ||| ||| |||||| |||||| ||||||||||||||    
T  1085775 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttggg 1085676  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  |||||||||||||  ||  |||||||  ||||||||||||||||||||||||    
T  1085675 taagagtgtggcgtctctcttacttgtgtggttgttctagcctcgatgtggacggtcc 1085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 14681510 - 14681663
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||| |||||||||| |||||||  |||||| |||||||||||||||||||  |||  ||| | | |||||| ||||||||||||||||||||||    
T  14681510 tgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggt 14681609  T
Q  102 aagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtc 153  Q
    |||  ||||| ||||||||||||||||||  ||||||||| |||||||||||||    
T  14681610 aagagtgtggtgtctctcacaagtgtggttgttctagccttgatgtggacggtc 14681663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7517579 - 7517729
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| ||||||||||||||    
T  7517579 gtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 7517678  T
Q  101 taagtttgtggcgtc--tctcacaagtgtggt--ttctagcctcgatgtgg 147  Q
    ||||  ||||| |||  ||||||  |||||||  |||||||||||||||||    
T  7517679 taagagtgtggtgtctgtctcacttgtgtggttgttctagcctcgatgtgg 7517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40094933 - 40094815
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| |||  ||| ||| |||||| |||| ||||||||||||||||    
T  40094933 gtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttggg 40094834  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  40094833 taagagtgtggcgtctctc 40094815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 30244272 - 30244426
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| |||||| |||  ||| |||||||||| |||||| |||||||||||||||||    
T  30244272 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaa 30244371  T
Q  104 gtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |  ||||||||  |||||||  ||| |||||||||||||| |||||    
T  30244372 gagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggatggtcc 30244426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 30245079 - 30245194
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||| ||| ||||||  ||||| |||||||||||||||||    
T  30245079 caagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaa 30245178  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  30245179 gagtgtggtgtctctc 30245194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 29157565 - 29157682
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| ||||| || |||||| |||||||||||||||||||| |||  ||| ||| ||||||||||||| |||||||||||||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggt 29157664  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  29157665 aagagtgtggtgtctctc 29157682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 37533519 - 37533406
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||| |||  ||| ||| ||||||||||||| ||||||||||||||||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaag 37533420  T
Q  105 tttgtggcgtctct 118  Q
      ||||| ||||||    
T  37533419 agtgtggtgtctct 37533406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 34218186 - 34218075
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagttt 107  Q
    ||||||||||||||  ||||||| |||||| |||||| ||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||||  |    
T  34218186 tgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagt 34218087  T
Q  108 gtggcgtctctc 119  Q
    |||| |||||||    
T  34218086 gtggtgtctctc 34218075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 11845198 - 11845308
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttg 108  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| |||  ||| ||| ||||||||||||| ||||||||||||| ||||  ||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtg 11845297  T
Q  109 tggcgtctctc 119  Q
    ||| |||||||    
T  11845298 tggtgtctctc 11845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 22566820 - 22566718
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  22566820 tgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 22566721  T
Q  102 aag 104  Q
    |||    
T  22566720 aag 22566718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 36534943 - 36534795
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| | |||||||| |||| ||| |||||| |||| ||||||||||||||| |||  ||| ||| |||||| | |  ||||||||||||||||    
T  36534943 gtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttggg 36534844  T
Q  101 taagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtgg 147  Q
    ||||  ||||||||||||||||||||||||  ||| |||||||||||||    
T  36534843 taagagtgtggcgtctctcacaagtgtggttgttccagcctcgatgtgg 36534795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 23536 - 23379
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||| |||  ||| ||| |||||| | |||| ||||||||||||||    
T  23536 gtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttggg 23437  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |||||||   || ||| |||  ||||||||||||| ||||||||||    
T  23436 taagagtgtggtgtctctcttgcatgtgcggttgttctagcctcgatttggacggtcc 23379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 45433243 - 45433358
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||  |||  ||||||||| | |||| |||||| ||||||||||    
T  45433243 caagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaa 45433342  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  45433343 gagtgtggtgtctctc 45433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 45754718 - 45754832
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| |||||| |||||| ||||||||||||| |||  |||||||||||||| |||| | |||||||||||||||||    
T  45754718 caagtgtgagttatatgt-ccacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaa 45754816  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  45754817 gagtgtggtgtctctc 45754832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 7554024 - 7554142
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||  |||||| |||| | ||||||||||||||    
T  7554024 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttggg 7554123  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  7554124 taagagtgtggtgtctctc 7554142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 19122740 - 19122833
Alignment:
Q  10 tgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||||||||||||||||| ||||||||||||||||||    
T  19122740 tgagttatatgt-ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaag 19122833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36939892 - 36939790
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||| ||||||||||||| |||  ||| ||| ||||||||||||| ||||||||||||||    
T  36939892 gtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggg 36939793  T
Q  101 taa 103  Q
    |||    
T  36939792 taa 36939790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 24177434 - 24177552
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||| |||  ||  ||| |||||| |||||| ||||| ||||| ||    
T  24177434 gtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttttgg 24177533  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  24177534 taagagtgtggcgtctctc 24177552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40230450 - 40230348
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| |||||||||| ||||||||||||||| |||||| |||||||| |||| |||  ||| ||| |||||| |||| ||||||||||||||||    
T  40230450 gtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttggg 40230351  T
Q  101 taa 103  Q
    |||    
T  40230350 taa 40230348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 22567196 - 22567080
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| |||  ||| ||| ||||||  ||||| ||||||||||| |||    
T  22567196 tgcaagtgtgagtaatatgt-ccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggt 22567098  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  22567097 aagagtgtggtgtctctc 22567080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 37533168 - 37533067
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||| | |||||| |||||||||||||||||||| |||  ||| ||| ||||||  ||||| |||||||||||||||    
T  37533168 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 37533069  T
Q  102 aa 103  Q
    ||    
T  37533068 aa 37533067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 24838857 - 24838742
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgag-atgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||||||||||| |||  || | ||  |||||| || |||||||||||||||||||||    
T  24838857 aagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaa 24838758  T
Q  104 gtttgtggcgtctctc 119  Q
    |  |||| ||||||||    
T  24838757 gagtgtgacgtctctc 24838742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41854634 - 41854736
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||| |||||||||||| ||||||| | |||||||||||||||||||||||||| |||| |||||||  ||||||  | || ||||||||||||||    
T  41854634 gtgcaagtatgagttatatgtcccacatc-agtaaaagagtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttggg 41854732  T
Q  101 taag 104  Q
    ||||    
T  41854733 taag 41854736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43241494 - 43241596
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||  | | ||||||||||   |||| ||||||||||| ||    
T  43241494 gtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttagg 43241593  T
Q  101 taa 103  Q
    |||    
T  43241594 taa 43241596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 6054562 - 6054716
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||| ||||||||||  ||||||| |||||| |||||| ||||||||||||| |||  ||| ||| ||||||  ||||| |||||||||||||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaa 6054661  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |||||||  ||  || ||||  ||||||||| ||||||||||||||    
T  6054662 gagtgtggtgtctctcctacttgtatggttgttctagccttgatgtggacggtcc 6054716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 41910749 - 41910657
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||| ||  |||| ||| |||||| |||||| |||||| ||||    
T  41910749 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccattggcttaagatttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 47129097 - 47129251
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||||||  |||| |||  ||| ||| |||||| |||| |  |||||||||||||||     
T  47129097 caagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgggtag 47129196  T
Q  104 gtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |  |||||||||||||||||  |||||||||| |||| ||||||||    
T  47129197 gagtgtggtgtctctctcacaagtgtggttgttctagcctcaatgtagacggtcc 47129251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 16569196 - 16569298
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||  ||||||| ||| || ||||||||||||| |||||| |||  ||| ||| |||||| |||||| ||||||||||| |||    
T  16569196 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggt 16569295  T
Q  102 aag 104  Q
    |||    
T  16569296 aag 16569298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 16596466 - 16596364
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||  ||||||| ||| || ||||||||||||| |||||| |||  ||| ||| |||||| |||||| ||||||||||| |||    
T  16596466 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggt 16596367  T
Q  102 aag 104  Q
    |||    
T  16596366 aag 16596364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30244700 - 30244757
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  30244700 gtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacacctta 30244757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30245493 - 30245550
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  30245493 gtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacacctta 30245550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30255338 - 30255395
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  30255338 gtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacacctta 30255395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36622959 - 36623060
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||| ||||  ||| |||   || ||  ||||||||||||| ||||||||||||||    
T  36622959 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttggg 36623058  T
Q  101 ta 102  Q
    ||    
T  36623059 ta 36623060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 45434638 - 45434738
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||| |||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| ||||||   | || |||||||||||||||||    
T  45434638 caagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaa 45434737  T
Q  104 g 104  Q
    |    
T  45434738 g 45434738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 9901648 - 9901760
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||| |||| | |  ||| ||  ||||||  ||||||||||||||||||||||||    
T  9901648 aagtgtgagttatatgt-ccacatcggataaaacagtaaaggttgaacatcttatacg-tagaggatccataaactcattgtcttaaggttttgggtaag 9901745  T
Q  105 tttgtggcgtctctc 119  Q
      ||||| |||||||    
T  9901746 agtgtggtgtctctc 9901760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 30032572 - 30032669
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||  |||  |  |||||| | || | ||||||||||||||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaag 30032669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36109076 - 36109019
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||    
T  36109076 gtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacacctta 36109019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 118460 - 118345
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| |||||||||| |||||||  ||| || |||||||||||||||||| | |||  ||| ||  |||||| |||||  | ||||||||||||    
T  118460 gtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttggg 118361  T
Q  101 taagtttgtggcgtct 116  Q
    ||||  ||||||||||    
T  118360 taagagtgtggcgtct 118345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8128600 - 8128497
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||| |||| ||| || | |||||||||||||||||| | |  ||| ||| |||||| ||||   |||||||||||||     
T  8128600 gtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggt 8128501  T
Q  101 taag 104  Q
    ||||    
T  8128500 taag 8128497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40094553 - 40094502
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaac 52  Q
    ||||||||||||||||||||| | |||||  |||||||||||||||||||||    
T  40094553 gtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28301702 - 28301613
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtctta 90  Q
    |||||||||||||||||||||  ||||||| ||| || |||||| | ||||||||||| |||  ||| ||| |||||| |||||| ||||    
T  28301702 gtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 28300340 - 28300255
Alignment:
Q  73 cataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||||| |||||| |||||| |||||||||||  |||||||||||||   ||||||||||  |||  |||||||||||||||||||    
T  28300340 cataaacccattgccttaagattttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcgatgtggacggtcc 28300255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 44361616 - 44361566
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctt 57  Q
    ||||||| |||||||  ||||||| ||||||||||||| ||||||||||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt 44361566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1085408 - 1085304
Alignment:
Q  1 gtgcaagtgtgagttat-atgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    ||||||||||||||| | |||| ||| |||| |||||| |||||| |||||||| || | |||  |||  || ||||||  ||||| |||||||||||||    
T  1085408 gtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgg 1085309  T
Q  100 gtaag 104  Q
    |||||    
T  1085308 gtaag 1085304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 7e-35; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36608818 - 36608661
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||| | |||  ||| ||  ||||||||||||||||||||||||||||    
T  36608818 gtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttggg 36608719  T
Q  101 taagtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |  |||||||| ||||||||  ||||||||||||||||||||||||    
T  36608718 taagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggacggtcc 36608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 50002426 - 50002582
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||  |||  ||| ||| |||||||||||||||||||||||||||||    
T  50002426 tgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggt 50002525  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||  ||  ||| |||  ||||||||||||||||| ||||||    
T  50002526 aagagtgtggtgtctctcttacttgtgcggttgttctagcctcgatgtgggcggtcc 50002582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 36572021 - 36572118
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||  ||| ||| ||||||||||||| |||||||||||||||    
T  36572021 caagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggt 36572118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4955474 - 4955356
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  || |||| |||||| ||| |||||||||||||||| |||  ||| |||||||||| |||||| ||||||||||||||    
T  4955474 gtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttggg 4955375  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  4955374 taagagtgtggcgtctctc 4955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 39404020 - 39404174
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||| ||| |||  ||| ||||||||||  ||| |  ||||||||||||||||    
T  39404020 caagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaa 39404119  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  |||||||||||||   |  |||||||  ||||||||||||||||||||||||    
T  39404120 gagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 39404174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 50459724 - 50459823
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||| |||||||||||| ||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaag 50459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 25483335 - 25483491
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||||||||| |||| |||  ||| ||  |||||| |||||| ||||||||||||||    
T  25483335 gtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttggg 25483434  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtc 153  Q
    ||||  ||||| |||||||   |  |||||||  |||||||||||||||||||||||    
T  25483435 taagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtc 25483491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 49880160 - 49880262
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| |||  ||| ||| |||||| ||| || |||||||||||||||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggt 49880259  T
Q  102 aag 104  Q
    |||    
T  49880260 aag 49880262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22183421 - 22183264
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||  ||| |||  | | ||| |||||| |||||| |||||||||||||     
T  22183421 gtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttgga 22183322  T
Q  101 taagtttgtggcgtctctcacaagtgt--ggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||||||||||| ||  |||  |||  ||||||||||||||||||||||||    
T  22183321 taagagtgtggcgtctctctcacttgtacggttgttctagcctcgatgtggacggtcc 22183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 34646803 - 34646688
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| |||||| |||||| ||||||||||||| ||   ||| ||||||||||  ||||| |||||||||||||||||    
T  34646803 caagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaa 34646704  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  34646703 gagtgtggtgtctctc 34646688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 52884694 - 52884793
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||||||   ||||| |||||| ||||||||||||||    
T  52884694 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttggg 52884793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 52884886 - 52884985
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||  |||||| |||||| ||||||||||||||    
T  52884886 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttggg 52884985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2741070 - 2741184
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||  ||| || ||||||||||||| |||||| |||  ||| ||| ||||| ||||||| ||||||||||||||    
T  2741070 gtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttggg 2741169  T
Q  101 taagtttgtggcgtc 115  Q
    ||||  |||||||||    
T  2741170 taagagtgtggcgtc 2741184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 6975612 - 6975495
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||| ||||||||||||||  ||||||  |||||| ||||||||||||| | |||| |||  ||| |||||||||||||||| ||||||| ||||||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaagattttgggt 6975513  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||||||||||||    
T  6975512 aagagtgtggcgtctctc 6975495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 50630911 - 50630794
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||| ||||||||||||| | |||||| |||||| |||||||||||||||| ||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  50630911 tgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggt 50630812  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  50630811 aagagtgtggtgtctctc 50630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 55933280 - 55933163
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| | |||||| |||||| ||||| |||||||||||||| |||  ||| ||| |||||| |||||| ||||| |||||||||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggt 55933181  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  55933180 aagagtgtggtgtctctc 55933163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 2740699 - 2740854
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||| || |||||||||||||||||||| |||  ||| |||  ||||| |||  | |||||||||||  |    
T  2740699 gtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacg 2740798  T
Q  101 taagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||||||||||| ||  ||||||  ||||||||||||| |||| |||||    
T  2740799 taagagtgtggcgtctctctcacttgtggttgttctagcctcgatatggatggtcc 2740854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10245919 - 10246034
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||  | ||||||||||||||    
T  10245919 gtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac-cataaacccaaagccttaaggttttggg 10246017  T
Q  101 taagtttgtggcgtctc 117  Q
    ||||  ||||| |||||    
T  10246018 taagagtgtggtgtctc 10246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 36629239 - 36629393
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| ||| || |||||| ||| ||||||||| |||  ||| ||| ||||||  ||||| |||||||||||||||||    
T  36629239 caagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa 36629338  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |||||||   |  |||||||  ||||||||||||||||||||||||    
T  36629339 gagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 36629393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3244608 - 3244490
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| ||| || ||||||||||||||| |||| |||  ||| ||| ||||||  ||||||||||| ||||||||    
T  3244608 gtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttggg 3244509  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||| ||||||||    
T  3244508 taagaatgtgtcgtctctc 3244490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51768217 - 51768115
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||| |||||||||||||| | | |||||||| ||||||||| ||||||||||||| ||   ||| ||||||||||  ||||||||||||||||||||    
T  51768217 gtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaaggttttggg 51768118  T
Q  101 taa 103  Q
    |||    
T  51768117 taa 51768115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 39404400 - 39404554
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||||||| |||  ||| ||| |||||| | || | |||||||||||||| ||    
T  39404400 caagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaa 39404499  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |||||||   |  |||||||  |||||||||||||||| |||||||    
T  39404500 gaatgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgaacggtcc 39404554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3340806 - 3340909
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| || ||||  || |||||||||||||||| ||||||| |||  ||| ||| |||||| ||| || ||||||||||||||    
T  3340806 gtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttggg 3340905  T
Q  101 taag 104  Q
    ||||    
T  3340906 taag 3340909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 41707618 - 41707523
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||| || |||  | |  || ||||||  |||||||||||||||||||    
T  41707618 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggttttgg 41707523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49076605 - 49076510
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttt 96  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||| |||  ||| |||  ||||| |||||||||||| ||||    
T  49076605 gtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccattgtcttaaagttt 49076510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 54017752 - 54017649
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||| ||  |||||| ||||||||||||||| |||| |||  ||| ||| |||||| |||||| ||||||||||| ||    
T  54017752 gtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttagg 54017653  T
Q  101 taag 104  Q
    ||||    
T  54017652 taag 54017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 20825842 - 20825892
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20825842 tgtgagttatatgttccacatcggataaaagagtaaaggttgaacacctta 20825892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22028118 - 22028000
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| |||||||| |||||||| |||||| |  ||||||||||||||||| |||  ||| ||| ||||||   |||| ||||||||||||||    
T  22028118 gtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttggg 22028019  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  22028018 taagaatgtggtgtctctc 22028000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 37059964 - 37060014
Alignment:
Q  464 ccatcttctatggttattcaagcttttgttaccaacaattgaggcataaat 514  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37059964 ccatcttctatggtcattcaagcttttgttaccaacaattgaggcataaat 37060014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 41370357 - 41370459
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| ||| |||| |||||| |||||| |||||| |||||| |||  ||| ||| |||||| |||||| ||||| |||||||||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggt 41370456  T
Q  102 aag 104  Q
    |||    
T  41370457 aag 41370459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 49302907 - 49303008
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacct--tacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||  || |||  ||| ||| |||||| |||||| ||||||||||||||||    
T  49302907 aagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggta 49303006  T
Q  103 ag 104  Q
    ||    
T  49303007 ag 49303008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 44620362 - 44620455
Alignment:
Q  11 gagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||   |||   | |||||| |||||| ||||||||||||||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaag 44620455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 39793014 - 39792860
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||  ||| || |||||| ||||||||||||| |||  ||| ||  | ||||  ||||| |||||||||||||||||    
T  39793014 caagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaa 39792915  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |||||||   |  |||||||  ||||||||||||||||||||||||    
T  39792914 gagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 39792860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1731804 - 1731701
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||| |||||||||||||| |||||||  |||||| ||||||||||||||| |||| ||   ||| ||| |||||| | |||| ||||||||||||||    
T  1731804 gtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttggg 1731705  T
Q  101 taag 104  Q
    ||||    
T  1731704 taag 1731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3341127 - 3341230
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||| ||||| ||| |||  ||| ||| |||||   |||||| ||||| |||||||    
T  3341127 gtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacccataacatcattgttttaagattttggg 3341226  T
Q  101 taag 104  Q
    ||||    
T  3341227 taag 3341230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 54108914 - 54109029
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| ||||||  || |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| ||||| ||||||||    
T  54108914 gtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gttttggg 54109010  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  54109011 taagagtgtggtgtctctc 54109029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 54936217 - 54936351
Alignment:
Q  23 ccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctcaca 122  Q
    |||||||  |||||| |||||||||||||||||||  |||  ||| ||| |||||| |||||| ||||||||||||||||||  ||||| ||||||| ||    
T  54936217 ccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctca 54936316  T
Q  123 -agtgtggt--ttctagcctcgatgtggacggtcc 154  Q
       ||||||  ||||||||||||||||||| ||||    
T  54936317 ctatgtggttgttctagcctcgatgtggacagtcc 54936351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 45496820 - 45496922
Alignment:
Q  17 tatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtct 116  Q
    ||||| |||||||| ||||||  ||||||||||||||||||| |||  ||| |||  |||||  ||||||||||||||||||||||||  ||||| ||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtct 45496919  T
Q  117 ctc 119  Q
    |||    
T  45496920 ctc 45496922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3700364 - 3700421
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  3700364 gtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacacctta 3700421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16888971 - 16888870
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||||| |||||||| ||| || ||||||||||||| |||||| |||  |||  ||  |||||  |||||||||| |||||||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggta 16888872  T
Q  103 ag 104  Q
    ||    
T  16888871 ag 16888870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 32941279 - 32941162
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||   |||||| | | || |||||||||||||||||||| ||   ||| | ||||||||  ||||| |||||||||||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggt 32941180  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||| ||||||||    
T  32941179 aagagtgtgacgtctctc 32941162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 37059598 - 37059666
Alignment:
Q  342 catacatcatggatgcaatgttatatcatttatatatgcatctaaatcaatcatttgaattccttgctcc 411  Q
    |||||||||||| | ||||||||||| |||||| |||||||||||| ||||| |||||||||||||||||    
T  37059598 catacatcatgggtccaatgttatataatttat-tatgcatctaaaccaatcctttgaattccttgctcc 37059666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 44621023 - 44621104
Alignment:
Q  23 ccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||| |||||| |||||||||||||||||||| |||  ||| | | ||||||  ||||||||||||||||||||||||    
T  44621023 ccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaag 44621104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 48111841 - 48111698
Alignment:
Q  15 tatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcg- 113  Q
    ||||| |||||| ||| ||||||||||||||||||||||| ||| |||  | | |||| |||||||||||  ||||||||||| |||| |  ||||| |     
T  48111841 tatatattccacctcggataaaagagtaaaggttgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgt 48111742  T
Q  114 -tctctcacaagtgtgg--tttctagcctcgatgtggacggtcc 154  Q
     |||||||||| |||||  |||||| |||| |||||||||||||    
T  48111741 ctctctcacaaatgtggtttttctaacctcaatgtggacggtcc 48111698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 37057914 - 37057961
Alignment:
Q  216 ggccataaaaacaaactcttgatgataaaaactaagcacaaaattatt 263  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  37057914 ggccataaaaacaaactcttgataataaacactaagcacaaaattatt 37057961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44620659 - 44620761
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| || ||| |||| ||||||||||| ||| |||  ||| ||| |||||| ||||   ||||||||||||||    
T  44620659 gtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataaa-ccataaccttaaggttttggg 44620757  T
Q  101 taag 104  Q
    ||||    
T  44620758 taag 44620761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 54741335 - 54741232
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| ||||||||  ||||||| ||| || |||||||||||||||||||| |||  ||| ||| |||| |   ||||||||||||||||||     
T  54741335 gtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccatacacagattgtcttaaggttttgga 54741236  T
Q  101 taag 104  Q
    ||||    
T  54741235 taag 54741232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 54017861 - 54017756
Alignment:
Q  1 gtgcaagtgtgagttatatgtt--ccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    |||||| |||||||||||| |   |||||||| |||||| |||||||||||||||||||| |||  ||| ||| ||||   ||||||||||||||||||     
T  54017861 gtgcaaatgtgagttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggtttta 54017762  T
Q  99 ggtaag 104  Q
    ||||||    
T  54017761 ggtaag 54017756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4390258 - 4390201
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||| || | |||||||  |||||||||||||||||||||||||||    
T  4390258 gtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacacctta 4390201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45050600 - 45050649
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttga 50  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  45050600 gtgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49076987 - 49076930
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||||||| || |  ||||| ||||||||||||||||||||    
T  49076987 gtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacacctta 49076930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 12150412 - 12150460
Alignment:
Q  218 ccataaaaacaaactcttgatgataaaaactaagcacaaaattatttat 266  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  12150412 ccataaaaacaaactcttgataataaacactaagcaaaaaattatttat 12150460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 50788139 - 50788087
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacac 54  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||||||||||||    
T  50788139 tgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaacac 50788087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 45489485 - 45489434
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacc 55  Q
    ||||||||| ||||||||  ||||||| ||||||||||||||||||||||||    
T  45489485 caagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacacc 45489434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 18932882 - 18932788
Alignment:
Q  25 acatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    |||||| |||||| ||||||||||||| |||||| ||   ||| ||| |||||| |||||| ||||||||||| ||||||  ||||| |||||||    
T  18932882 acatcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctc 18932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 54343147 - 54343101
Alignment:
Q  12 agttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacacctta 54343101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16889691 - 16889590
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||||  || |||| ||| || ||||||||||||| |||||| |||  ||| || ||||||| | | || ||||| ||||||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggta 16889592  T
Q  103 ag 104  Q
    ||    
T  16889591 ag 16889590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22028528 - 22028408
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagag--taaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    |||||||||| | |||||||| | |||||| |||||| |   ||||||||||||||||||  ||  ||| ||| ||||||  ||||||||||| ||||||    
T  22028528 gtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttg 22028429  T
Q  99 ggtaagtttgtggcgtctctc 119  Q
    ||||||  ||||| |||||||    
T  22028428 ggtaagagtgtggtgtctctc 22028408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44621425 - 44621482
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| | |||| | |||||| |||||||||| |||||||||    
T  44621425 gtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacacctta 44621482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 23817767 - 23817681
Alignment:
Q  72 tcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctca--caagtgtggtt--tctagcctcgatgtggacggtcc 154  Q
    |||||||  ||||| ||||||||||||||||||  ||||| |||||||   | |||||||||  |||||||||||||||||||||||    
T  23817767 tcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacggtcc 23817681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 40067045 - 40067145
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagt-aaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||||| |||||| ||||||| || ||| ||||||||| ||| |||  ||| ||| |||| ||||| |  |||||| |||||||||    
T  40067045 caagtgtgagttatatgttctacatcggataaaagtgtaaaaagttgaacacattataagtaagaggacacatagatccactaccttaagattttgggta 40067144  T
Q  103 a 103  Q
    |    
T  40067145 a 40067145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 43174508 - 43174624
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaa-gagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||   ||||||  |||||| ||||||||||||||||||||| |||  ||| ||| |||||| | ||   ||||| || |||||||    
T  43174508 caagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaacctatgaccttaaagtgttgggta 43174607  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  |||||||||||||    
T  43174608 agagtgtggcgtctctc 43174624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 44620304 - 44620352
Alignment:
Q  10 tgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||| |||||| | |||||| ||||||||||||||||||||    
T  44620304 tgagttatatgtcccacatgggataaaatagtaaaggttgaacacctta 44620352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 473
Target Start/End: Original strand, 37059666 - 37059705
Alignment:
Q  434 cgaaaatgtcatatgcaagaattgaggcatccatcttcta 473  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  37059666 cgaaaatggcatatgcaagaattgaggcatccctcttcta 37059705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10246346 - 10246428
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccat 83  Q
    ||||||||||  |||||||||  || |||| |||||||||||||||||||||| |||| |||  ||| ||| |||||| ||||    
T  10246346 gtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 10246428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 20826223 - 20826269
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacac 54  Q
    |||||||||||||| |||||||| |||||| |||||| |||||||||    
T  20826223 tgtgagttatatgtcccacatcggataaaatagtaaaagttgaacac 20826269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28034228 - 28034346
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| |||||||| || ||||| ||| || |||  ||||||||||| ||| ||| ||||  || ||||||   ||||  |||||||||| ||    
T  28034228 gtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaacttattgctttaaggttttagg 28034327  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  28034328 taagagtgtggcgtctctc 28034346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 30788276 - 30788317
Alignment:
Q  60 aagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||| ||||| |||||||||| ||||||||||||||||||    
T  30788276 aagcgaaatgacccataaatccaatgtcttaaggttttgggt 30788317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 760194 - 760286
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    ||||||||||||||| |||||||||||| || | | ||||||||  || ||| ||| |||| ||| ||||||  ||||| |||||| ||||||    
T  760194 gtgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaagattttgg 760286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 54108538 - 54108639
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcat-aaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||  || ||| || | |||||| |||||||||||||||||||| |||  | | ||| ||| |||| ||||| |||||||||||||     
T  54108538 tgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttggc 54108635  T
Q  101 taag 104  Q
    ||||    
T  54108636 taag 54108639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 15880265 - 15880380
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  15880265 caagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 15880364  T
Q  104 gtttgtggcgtctctc 119  Q
    |  |||||||||||||    
T  15880365 gagtgtggcgtctctc 15880380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 14745825 - 14745669
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||| | |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 14745726  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  |||||||||||||   ||||||||||  ||||||||||||||||||| ||||    
T  14745725 aagagtgtggcgtctctcttgcaagtgtggttgttctagcctcgatgtggacagtcc 14745669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 962598 - 962700
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| ||| || |||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggt 962697  T
Q  102 aag 104  Q
    |||    
T  962698 aag 962700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 36178763 - 36178646
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 36178664  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  36178663 aagagtgtggtgtctctc 36178646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 6421387 - 6421502
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||  ||| ||||||||||  ||||| ||| |||||||||||||    
T  6421387 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaa 6421486  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  6421487 gagtgtggtgtctctc 6421502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 35580882 - 35580765
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||||| ||| |||| ||| |||||| |||||| ||||||||||||||    
T  35580882 gtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagaggac-cataaacccattgccttaaggttttggg 35580784  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  || ||||||||||    
T  35580783 taagagtgcggcgtctctc 35580765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 36178427 - 36178325
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||| ||| |||||| ||||||||| |||||||||| |||  ||  |||||||||| ||||||||||||||||||||||    
T  36178427 tgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaaggttttgggt 36178328  T
Q  102 aag 104  Q
    |||    
T  36178327 aag 36178325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 37106188 - 37106290
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||  |||||||||||||||    
T  37106188 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggt 37106287  T
Q  102 aag 104  Q
    |||    
T  37106288 aag 37106290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 5542783 - 5542666
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||  ||| ||| |||||| | |||| ||||||||||| |||    
T  5542783 tgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggt 5542684  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  5542683 aagagtgtggtgtctctc 5542666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 37105924 - 37106041
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||  ||  ||| ||||||  ||||| |||||| ||||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggt 37106023  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  37106024 aagagtgtggtgtctctc 37106041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 41283633 - 41283516
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||| |||  ||| ||| ||||||  ||||| ||||||||||| |||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggt 41283534  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||||||||||||    
T  41283533 aagagtgtggcgtctctc 41283516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 42514649 - 42514805
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| | |||||  ||| || |||||||||||||||||||| |||  ||| ||| |||||| |||| | |||||| ||||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggt 42514748  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  |||||||||||||  ||  ||| |||  ||||||||||||||||||||||||    
T  42514749 aagagtgtggcgtctctcttacttgtggggttgttctagcctcgatgtggacggtcc 42514805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 14745452 - 14745335
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||| |||||||||||||| ||||||||||||||| ||||| ||||||||| |||  |||   || ||| |||||| |||||| |||||||||||||||    
T  14745452 tgcaactgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggt 14745353  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||||||||||||    
T  14745352 aagagtgtggcgtctctc 14745335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 12910231 - 12910330
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||| ||||||||||||||||||||| ||  || |||| ||||||||| ||||| ||| || |||||| |||||| ||||||||||||||||||||||||    
T  12910231 aagtttgagttatatgttccacatcggatggaaaagtacaggttgaaccccttataagtgaaatgacttataaattcattgtcttaaggttttgggtaag 12910330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 36006035 - 36005921
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||||||| || |||||| ||||||||||||| |||  ||| ||| ||||||  ||||| |||||||||||||||||    
T  36006035 caagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa 36005937  T
Q  104 gtttgtggcgtctctc 119  Q
       |||||||||||||    
T  36005936 aagtgtggcgtctctc 36005921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 15511646 - 15511536
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttg 108  Q
    |||||||||||||  |||| || ||||||||||||||||||||||| ||| |||  ||| ||| |||||| ||||||||||||| |||||||||||  ||    
T  15511646 gtgagttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtg 15511547  T
Q  109 tggcgtctctc 119  Q
    ||| |||||||    
T  15511546 tggtgtctctc 15511536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 5543156 - 5543040
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  ||| ||  |||||| | |||| |||||| ||||||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggt 5543057  T
Q  102 aagtttgtggcgtctct 118  Q
    |||  ||||| ||||||    
T  5543056 aagagtgtggtgtctct 5543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38796779 - 38796660
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||  |||||| | |||||||||||||||||| |||  ||| ||| |||||| | | || ||||||||||||||    
T  38796779 gtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttggg 38796680  T
Q  101 ta--agtttgtggcgtctct 118  Q
    ||  ||| ||||||||||||    
T  38796679 taagagtatgtggcgtctct 38796660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33561610 - 33561507
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||||||||||  ||| || |||  ||||| ||||| ||| ||| |||| ||| ||||||  ||||||||||||||||||||    
T  33561610 gtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaactcattgtcttaaggttttggg 33561511  T
Q  101 taag 104  Q
    ||||    
T  33561510 taag 33561507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28254396 - 28254278
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||| ||||||| |||||||| |||||||| ||| || ||||||||||||||| |||| |||  ||| ||| ||||||  ||||| ||||||||||||||    
T  28254396 gtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttggg 28254297  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  28254296 taagagtgtggtgtctctc 28254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1769891 - 1769968
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaa 78  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||| |||  ||| ||||||||||    
T  1769891 gtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaa 1769968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36785722 - 36785665
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  36785722 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctta 36785665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7598227 - 7598330
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| |||||||||| |||||||||| || |||||||||| ||||||||| ||   ||| ||| ||||||  ||| | ||||||||||||||    
T  7598227 gtgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttggg 7598326  T
Q  101 taag 104  Q
    ||||    
T  7598327 taag 7598330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16542448 - 16542551
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||||||||||| ||   ||| |||| |||||  ||||| |||||| ||||| |    
T  16542448 gtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagattttgag 16542547  T
Q  101 taag 104  Q
    ||||    
T  16542548 taag 16542551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28531473 - 28531370
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||| || || ||||||||||||||||| |||  ||| | | ||||||  ||||| |||||| |||||||    
T  28531473 gtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttggg 28531374  T
Q  101 taag 104  Q
    ||||    
T  28531373 taag 28531370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31468905 - 31468806
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||| | |||| |    ||| ||| ||||||  ||||| ||||||||||||||    
T  31468905 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttata----agaggacccataaactcattgccttaaggttttggg 31468810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37894851 - 37894753
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    |||||| |||||||||||||| |||||| ||||| || |||||||| | || |||||| |||  ||| ||||||||||||||||| |||||| ||||||    
T  37894851 gtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaagattttgg 37894753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40679788 - 40679670
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||| |||||||||||||| ||| |||| ||| || ||||| |||||||||||||| |||  |||  || |||||| |||| | |||||| |||||||    
T  40679788 gtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttggg 40679689  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  40679688 taagagtgtggcgtctctc 40679670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 40733885 - 40733939
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  40733885 caagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacacctta 40733939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7598608 - 7598665
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||    
T  7598608 gtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacacctta 7598665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29676902 - 29676959
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  29676902 gtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacacctta 29676959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 31899581 - 31899528
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  31899581 aagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacacctta 31899528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 33731653 - 33731750
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||| |  ||||||| ||||||||||||||||||| ||||||| |||  ||| ||  |||||| | |||| ||||||||||||||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaag 33731750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38796377 - 38796320
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||    
T  38796377 gtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacacctta 38796320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 37632756 - 37632602
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| | |||||| |||||| ||||||||||  |||  ||| |||  ||| ||| |||||| ||||    |||||||||||||    
T  37632756 gtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttggg 37632657  T
Q  101 taagtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacgg 151  Q
    ||||  ||||| |  ||||| ||||||||| |  |||||||||||||||||||||    
T  37632656 taagagtgtggtgtatctcttacaagtgtgattgttctagcctcgatgtggacgg 37632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 5367457 - 5367572
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||  ||||||| ||| |||| ||||||||| ||||||||||||||||| |||  ||||||  ||| ||  |||   |||||||||||||||||    
T  5367457 caagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaa 5367556  T
Q  104 gtttgtggcgtctctc 119  Q
    |  |||||||||||||    
T  5367557 gagtgtggcgtctctc 5367572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 12529186 - 12529091
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    |||||||||||||||||||| | ||||| ||||||| ||||||| ||||||||| || |||  ||| ||||||||||  ||||| ||||| |||||    
T  12529186 tgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaaagtttt 12529091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 6712978 - 6713071
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||||| |||  ||| ||| |||||| | ||||  ||||||||||    
T  6712978 caagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttt 6713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30323463 - 30323582
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||| ||||||||| ||| |||  ||| || | |  ||||||||||| ||| ||| |||| |||  |||||  ||||| ||||||||||||||    
T  30323463 gtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttggg 30323562  T
Q  101 taagtttgtggcgtctctca 120  Q
    ||||  ||||||||||||||    
T  30323563 taagagtgtggcgtctctca 30323582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 40163520 - 40163429
Alignment:
Q  13 gttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtc-ttaaggttttgggtaa 103  Q
    ||||||||| |||||||| ||| || |||||||||||||||||||| |||  ||||||| ||| || | | |||| ||||||||||||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaa 40163429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 40733519 - 40733634
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||  |||||| |||||| ||||||||||||| |||  ||| ||| |||||| | |    ||||| |||||||||||    
T  40733519 caagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaa 40733618  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  40733619 gagtgtggtgtctctc 40733634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 6421306 - 6421352
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttga 50  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||    
T  6421306 caagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 31259750 - 31259672
Alignment:
Q  26 catcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||| ||||||||||||||||| ||||||||| |||  ||||||| |||||| | ||   ||||||||||||||||||    
T  31259750 catcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaag 31259672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16590887 - 16590940
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaat-aaaagagtaaaggttgaaca 53  Q
    ||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||    
T  16590887 gtgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca 16590940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 36178308 - 36178227
Alignment:
Q  23 ccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||| |||||| |||||||||||||||||||| |||  ||   || |||||| |||||| |||||| |||||||||||    
T  36178308 ccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaag 36178227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 29874179 - 29874067
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||| ||||||||| |||||||  ||| || |||  ||||||||||| ||| ||  | || ||| |||||| |||||| ||||||||||||| |||    
T  29874179 caagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggttttggataa 29874080  T
Q  104 gtttgtggcgtct 116  Q
    |  ||||||||||    
T  29874079 gagtgtggcgtct 29874067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 37895220 - 37895117
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||| ||| |||||||||||| |||||||| ||| || | |||| |||||| |||||| |||  | |  || |||||| |||||| ||||||||||||||    
T  37895220 gtgcgagtttgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttggg 37895121  T
Q  101 taag 104  Q
    ||||    
T  37895120 taag 37895117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 6422126 - 6422266
Alignment:
Q  18 atgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctc 117  Q
    |||| |||||||  |||||| |||||||||||||||| ||| ||   ||| ||| |||||| |||| | ||||||||||| ||||||  ||||| |||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctc 6422225  T
Q  118 tc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||   |  |||||||  ||||||||||||||||||| ||||    
T  6422226 tcttgcttgtgtggttgttctagcctcgatgtggactgtcc 6422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30313177 - 30313294
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||| ||| |||||||||  ||||||| ||| || |||  ||||||||||| ||| ||| |||| ||| || |||  ||||| |||||| |||||||    
T  30313177 gtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaacac-ttataagtgagaggacccaaaaactcattgccttaagattttggg 30313275  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  30313276 taagagtgtggcgtctctc 30313294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3672718 - 3672754
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaa 37  Q
    |||||||| |||||||||||| |||||||||||||||    
T  3672718 gtgcaagtatgagttatatgtcccacatcgaataaaa 3672754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 7e-32; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 436 - 514
Target Start/End: Original strand, 15155408 - 15155486
Alignment:
Q  436 aaaatgtcatatgcaagaattgaggcatccatcttctatggttattcaagcttttgttaccaacaattgaggcataaat 514  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15155408 aaaatggcatatgcaagaattgaggcatccatcttctatggtcattcaagcttttgttaccaacaattgaggcataaat 15155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 26074614 - 26074761
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  26074614 caagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 26074713  T
Q  104 gtttgtggcg--tctctcacaagtgtggtt--tctagcctcgatgtgg 147  Q
    |  ||||| |  |||||||| |||||||||  |||| |||||||||||    
T  26074714 gagtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36568726 - 36568571
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||| || |||||| ||||||||||||| ||| |||||||| | |||| |||||| ||||||||||| ||    
T  36568726 gtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttgg 36568627  T
Q  101 taagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||||||||||| |  |||||||  ||||| |||||||||||| |||||    
T  36568626 taagagtgtggcgtctctctcttgtgtggttgttctatcctcgatgtggaaggtcc 36568571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35150006 - 35150162
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |||  ||| ||| ||||||||||||||||||||||||||||    
T  35150006 gtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaatccattgtcttaaggttttggg 35150104  T
Q  101 taagtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||   ||||| |  |||||||| ||||||||  ||||| |||| |||||||| ||||    
T  35150105 taaaagtgtggtgtctctctcactagtgtggttgttctaacctcaatgtggaccgtcc 35150162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15370098 - 15370216
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||  ||| ||| ||||||||||  | ||||||||||||||    
T  15370098 gtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttggg 15370197  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  15370198 taagagtgtggtgtctctc 15370216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 18603276 - 18603124
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 18603177  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggt 152  Q
    |  |||||| ||||||   |  |||||||  ||||||||||||||||||||||    
T  18603176 gagtgtggcatctctcttgcttgtgtggtagttctagcctcgatgtggacggt 18603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 42405752 - 42405600
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||  | | |||||||||| | | || |||||||||||||||||    
T  42405752 caagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaa 42405653  T
Q  104 gtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| ||||||  |  ||| |||  ||||||||||||||||||||||||    
T  42405652 gagtgtggtgtctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 42405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 299490 - 299605
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||||||| ||||||  ||| | |||||||||||| |||    
T  299490 gcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgta 299589  T
Q  103 agtttgtggcgtctct 118  Q
    ||  ||||||||||||    
T  299590 agagtgtggcgtctct 299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 40296474 - 40296317
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| || ||||||||||||||||| |||  ||| ||| |||||| |||||| ||| ||||||||||    
T  40296474 gtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttggg 40296375  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |||||||   |  ||| |||  ||||||||||||||||||||||||    
T  40296374 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 40296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13415919 - 13415801
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||| |||  ||| ||| |||||| | |||  ||||||||||||||    
T  13415919 gtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttggg 13415820  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  13415819 taagagtgtggcgtctctc 13415801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 624196 - 624350
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||| | |||||| |||||||||||||||| ||| |||  ||||||| |||||| |||| | ||| |||||||||||    
T  624196 tgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggt 624295  T
Q  102 aagtttgtggcgtctctcacaagtgtgg----tttctagcctcgatgtggacggt 152  Q
    |||  ||||| ||||||| ||  |||||     ||||||||||||||||||||||    
T  624296 aagagtgtggtgtctctctcacttgtggggttgttctagcctcgatgtggacggt 624350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 26075318 - 26075168
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt-a 102  Q
    ||||||||| ||||||||  ||||||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| ||||||||||||||| |    
T  26075318 caagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 26075219  T
Q  103 agtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggac 149  Q
    ||  |||| ||||||||   ||||||||||  || ||||||||||||||||    
T  26075218 agagtgtgtcgtctctcttgcaagtgtggttgttttagcctcgatgtggac 26075168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12662811 - 12662708
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||  ||| |||  |||  || |||||||||||||||||||| |||||||    
T  12662811 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttggg 12662712  T
Q  101 taag 104  Q
    ||||    
T  12662711 taag 12662708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 25327938 - 25328091
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||| | |||||| |||||| |||||| ||||||||||||| |||  ||| ||| |||||| | | || ||||||||||||||||||    
T  25327938 aagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaag 25328037  T
Q  105 tttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
      ||||| |||||||   ||||||||||  |||||||||| |||||||||||||    
T  25328038 agtgtggtgtctctcttgcaagtgtggttgttctagcctcaatgtggacggtcc 25328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 6500451 - 6500606
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| |||   |||| |||||| |||||||||||||||    
T  6500451 tgcaagtgtgagttatatgt-ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggt 6500549  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  ||| |||  ||||||||||||||||||||||||    
T  6500550 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 6500606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 32487394 - 32487495
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||||| || |||  ||| ||| |||||| |||||| |||||||||||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacc-tataagtaagaggacccataaacccattgccttaaggttttgggt 32487492  T
Q  102 aag 104  Q
    |||    
T  32487493 aag 32487495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 36492375 - 36492219
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||  ||| |||  |||||  ||||  ||| ||||||||| |    
T  36492375 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttggat 36492276  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  |||||||  ||||||||||||||||||||||||    
T  36492275 aagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 36492219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 26074305 - 26074155
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||| | | |  ||| ||| ||| || |||||| ||||||||||||||    
T  26074305 gtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttggg 26074206  T
Q  101 taagtttgtggcg--tctctcacaagtgtggtt--tctagcctcgatgtgg 147  Q
    ||||  ||||| |  |||||||| |||||||||  |||| |||||||||||    
T  26074205 taagagtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 26074938 - 26074822
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt-a 102  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||  || |||   || ||| |||||| | |||||||||||||||||||| |    
T  26074938 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaa 26074839  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  |||||||||||||    
T  26074838 agagtgtggcgtctctc 26074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 41170640 - 41170736
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||| |||| |||  ||| ||| |||||| |||||| ||||||||||||||||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaag 41170736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 11417128 - 11417033
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| |||  ||| ||  |||||| |||||| |||||||||||| |||||    
T  11417128 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaag 11417033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3295173 - 3295056
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||| |||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| ||| ||||||||||    
T  3295173 gtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttggg 3295075  T
Q  101 taagtttgtggcgtctctc 119  Q
    || |  ||||| |||||||    
T  3295074 tatgagtgtggtgtctctc 3295056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 6500823 - 6500978
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||   | | ||| ||||||  ||||| ||||||||||||| |    
T  6500823 tgcaagtgtgagttatatgt-ccacatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggat 6500921  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||  ||  ||| |||  ||||||||||||||||||||||||    
T  6500922 aagagtgtggtgtctctcttacttgtgcggttattctagcctcgatgtggacggtcc 6500978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 6224198 - 6224298
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |||  ||| ||| ||||||  ||| | ||||||||||| |||||    
T  6224198 caagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaa 6224297  T
Q  104 g 104  Q
    |    
T  6224298 g 6224298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 26591068 - 26590918
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||| ||| |||||||| |||||||  || |||||||||||||||||||| |||  ||| ||  ||||||| || || |||||||||||| ||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagt 26590969  T
Q  102 aagtttgtggcgtc--tctcacaagtgtggt--ttctagcctcgatgtgga 148  Q
    |||  |||||||||  |||||| ||||||||  ||||| ||||||||||||    
T  26590968 aagagtgtggcgtctctctcactagtgtggttgttctaacctcgatgtgga 26590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 3295498 - 3295347
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| | |||| ||||||||||| ||||||    
T  3295498 aagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggtttt-ggtaag 3295401  T
Q  105 tttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
      ||||  |||||||   |  |||||||  ||||||||||||||||||||||||    
T  3295400 agtgtgttgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 3295347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 9498812 - 9498695
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||| ||||||||||||||  ||||||  ||| || |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||| ||||||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggt 9498713  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  9498712 aagagtgtggtgtctctc 9498695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 29549413 - 29549296
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||||||| |||  |||||| |||||||| |||||||| || |||  ||| ||| ||||||  ||||  ||||||||||||| |    
T  29549413 tgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttggat 29549314  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||||||||||||    
T  29549313 aagagtgtggcgtctctc 29549296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 1028673 - 1028519
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| ||| || |||||||| ||||||| ||| |||  ||| ||| |||||| | ||   ||||||||||| |||||    
T  1028673 caagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaa 1028574  T
Q  104 gtttgtggcgtctctcacaagtgtg--gtt--tctagcctcgatgtggacggtcc 154  Q
    |  ||||||||||||| ||  ||||  |||  |||||||||||||||||||||||    
T  1028573 gagtgtggcgtctctctcacttgtgcggttgttctagcctcgatgtggacggtcc 1028519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 38427553 - 38427664
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtt 106  Q
    ||||||||||||||| |||||| | ||| || ||||||||||||||| |||| |||  ||| ||| ||| |||||||||||||||||||||| |||||      
T  38427553 gtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataag-tagaggacccattaatccattgtcttaaggttttgtgtaagag 38427651  T
Q  107 tgtggcgtctctc 119  Q
    |||| ||||||||    
T  38427652 tgtgacgtctctc 38427664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 34753173 - 34753066
Alignment:
Q  12 agttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtgg 111  Q
    |||||||||| |||||| | ||| || |||||| ||||||||||||| |||  ||| ||| |||||| | |||| ||||||||||||||||||  |||||    
T  34753173 agttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtgg 34753074  T
Q  112 cgtctctc 119  Q
    ||||||||    
T  34753073 cgtctctc 34753066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 27502194 - 27502038
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||| | |||||| |||||||||| ||||||||| |||  ||| ||| |||||| | |||| |||||| |||| |||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttttggt 27502095  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||   ||||| |||||||   |  |||||||  ||||| ||||||||||||||||||    
T  27502094 aaaagtgtggtgtctctcttgcttgtgtggttgttctatcctcgatgtggacggtcc 27502038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 41632781 - 41632899
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| ||||||||||  ||||||| ||| || |||||||||||||||||||| |||  ||| ||| |||||| ||| ||  ||||| |||||||    
T  41632781 gtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttggg 41632880  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  41632881 taagagtgtggtgtctctc 41632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 35167966 - 35167840
Alignment:
Q  32 ataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctcaca--agtgtgg 129  Q
    ||||||||||||||||||||||||||| |||   |||||| |||||||| |||| ||| | ||||| ||||||  ||||  ||||||||||  |||||||    
T  35167966 ataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgtgatgtctctcacactagtgtgg 35167867  T
Q  130 t--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||||| ||||||||||| ||||    
T  35167866 ttgttctagcatcgatgtggactgtcc 35167840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35150746 - 35150789
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaa 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  35150746 gtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35151037 - 35151080
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaa 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  35151037 gtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 623818 - 623935
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||  ||||||| ||| || |||||||||||||||| |||||||  || |||  ||||||   || | |||||||||||| ||    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagt 623917  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  623918 aagagtgtggtgtctctc 623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 15155353 - 15155405
Alignment:
Q  357 caatgttatatcatttatatatgcatctaaatcaatcatttgaattccttgctc 410  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  15155353 caatgttatatcatttat-tatgcatctaaaccaatcctttgaattccttgctc 15155405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 41635346 - 41635247
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||| ||||||||||||| | ||||  ||||||||||||| ||||||||||||| ||   ||| ||  |||||||||||||||||||  |||| ||||||    
T  41635346 aagtatgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccattgtcttaaaattttaggtaag 41635247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 5723949 - 5723851
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||| |||||||| |||||| | |||| ||||||||| ||| | |  |||  || ||| |||  |||||||||||||||||||    
T  5723949 tgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccattaatttattgtcttaaggttttggg 5723851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 19275566 - 19275642
Alignment:
Q  39 agtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtct 116  Q
    |||| ||||||||||| ||| |||  ||| ||| ||||||| |||||||||||| ||||||||||| |||||||||||    
T  19275566 agtagaggttgaacac-ttataaggaagaagacccataaattcattgtcttaagattttgggtaagattgtggcgtct 19275642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 42508614 - 42508707
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    ||||||||| |||||| | |||||||| ||| || |||||||||| |||| || | |||  ||| |||||||||| |||||| |||||||||||    
T  42508614 caagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaaggtttt 42508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 5660298 - 5660338
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagta 42  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  5660298 tgcaaatgtgagttatatgttccacatcgaataaaatagta 5660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 6557164 - 6557104
Alignment:
Q  43 aaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||| ||| ||||||||||||  |||||||||| |||||||| ||||| ||||||||    
T  6557164 aaggttgagcactttacaagcgagagaactcataaattcattgtctcaaggtgttgggtaa 6557104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 15370439 - 15370519
Alignment:
Q  39 agtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    |||||| ||||||||||||| |||  ||| ||| |||||| |||| | |||||||||||| |||||  |||||||||||||    
T  15370439 agtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctc 15370519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31509622 - 31509718
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    |||||||||||||||||||||  ||||||| ||| || |||  ||||||| ||| ||| ||| |||| ||||||||||  ||||| ||| |||||||    
T  31509622 gtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgccttgaggtttt 31509718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 35914852 - 35914932
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattg 85  Q
    |||| ||||||||||||  ||||||| ||||||||||||||||||||||  ||| |||  ||| ||| | |||||||||||    
T  35914852 aagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaatccattg 35914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 300961 - 301015
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||| ||||||||| |||||||  |||||| ||||||||||||| ||||||    
T  300961 caagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaatacctta 301015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 7768852 - 7768906
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||| | | |||||| |||||| | ||||||||||||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacacctta 7768906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 15155030 - 15155079
Alignment:
Q  216 ggccataaaaacaaactcttgatgataaaaactaagcacaaaattatttat 266  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||||||||||    
T  15155030 ggccataaaaa-aaactcatgataataaacactaagcacaaaattatttat 15155079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 39309686 - 39309736
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacac 54  Q
    ||||| |||||||||||| |||||||| ||||||| ||||| |||||||||    
T  39309686 caagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacac 39309736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6225047 - 6225100
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||| |||||||||| | |||||||  |||||||| ||||||||||||||||||    
T  6225047 aagtctgagttatatatcccacatcagataaaagaataaaggttgaacacctta 6225100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 13786157 - 13786057
Alignment:
Q  4 caagtgtgagttat-atgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||| || ||||| ||||||| |||||| ||| | |||||||||| ||| |||  ||||||| | |||||| ||||||||||| |||||| ||    
T  13786157 caagtgtgagtaattatgtttcacatcggataaaa-agtgatggttgaacactttataagtaagatgacccgtaaatctattgtcttaagattttggata 13786059  T
Q  103 ag 104  Q
    ||    
T  13786058 ag 13786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 36522053 - 36521952
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||||| |||||||  ||| || |||  |||||||||||  |  ||  |||| ||| |||||| | |||| ||||||||||||||||    
T  36522053 gcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctttaaatgagaggacccataaaccaattgccttaaggttttgggta 36521954  T
Q  103 ag 104  Q
    ||    
T  36521953 ag 36521952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 42524719 - 42524811
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    ||||||||| ||||||||  ||||||| ||| || ||||||| ||||||| ||||  |   ||| |||||||||||||||||||| ||||||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaag-ttgaacatcttatgaataagaggactcataaatccattgtctgaaggtttt 42524811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29644740 - 29644622
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |||  |||  || |||||| |||||||||||||||||||||    
T  29644740 gtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttggg 29644641  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  29644640 taagagtgtggcgtctctc 29644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29645061 - 29644943
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||| |||  ||| ||| |||||| |||||||||||||||||||||    
T  29645061 gtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttggg 29644962  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  29644961 taagagtgtggcgtctctc 29644943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 42342547 - 42342429
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||| |||  ||| ||| ||||||||||||||||||||||||||||    
T  42342547 gtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttggg 42342448  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||| ||||||||    
T  42342447 taagagtgtgacgtctctc 42342429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 53118131 - 53117977
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||| || ||| ||| |||||| |||||| |||||||||    
T  53118131 gcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgggta 53118033  T
Q  103 agtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||  ||| | |  |||||||||||||||||  ||||||| |||||||| |||||||    
T  53118032 agagtgtagtgtctctctcacaagtgtggttgttctagcatcgatgtgaacggtcc 53117977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 37990795 - 37990641
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||  ||| ||||||||||  ||||| |||||||||||||||||    
T  37990795 caagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaa 37990696  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||| |||||||   |  ||||| |  ||||||||||||||||||||||||    
T  37990695 gagtgtggtgtctctcttgcttgtgtgattgttctagcctcgatgtggacggtcc 37990641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 39389070 - 39389186
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| | |||||| |||||| |||||||||||||||||||| ||   ||| ||| |||||| ||||||||||||||||||||||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggt 39389169  T
Q  102 aagtttgtggcgtctct 118  Q
    |||  ||||| ||||||    
T  39389170 aagagtgtggtgtctct 39389186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 33803411 - 33803254
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||| |||||||||||||| |||||||| |||||| ||||||||||||||||| || |||  ||| ||| |||||| ||||||  ||||||| |||||    
T  33803411 gtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattggg 33803312  T
Q  101 taagtttgtggcgtct--ctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||||||||  ||| |  |||||||  ||||||||||||||||||||||||    
T  33803311 taagagtgtggcgtctccctctcttgtgtggttgttctagcctcgatgtggacggtcc 33803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 54017975 - 54017818
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| |||  ||| |||||||||| | |  | ||||||||||||||    
T  54017975 gtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttggg 54017876  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |||||||  ||  |||||||  ||||||| ||||||||| ||||||    
T  54017875 taagagtgtggtgtctctcttacttgtgtggttgttctagcttcgatgtgggcggtcc 54017818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12114721 - 12114603
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| |||||||| | |||||||| ||| || |||||||||||||||||||| |||  ||| ||| |||||| |||||||||||||||||||||    
T  12114721 gtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttggg 12114622  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  12114621 taagagtgtggtgtctctc 12114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15773191 - 15773294
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||  ||| |||||||||   ||||| ||||| ||||||||    
T  15773191 gtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagttttggg 15773290  T
Q  101 taag 104  Q
    ||||    
T  15773291 taag 15773294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 25755396 - 25755511
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||||| |||||| |||  ||| ||||||||||||||||||| ||| ||| |||||||    
T  25755396 caagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaa 25755495  T
Q  104 gtttgtggcgtctctc 119  Q
       |||||||||||||    
T  25755496 aagtgtggcgtctctc 25755511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 35946524 - 35946623
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| || ||| |||||||||||||||||    
T  35946524 caagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaa 35946623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 42342249 - 42342092
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| | ||||||||||||||| ||||||||||||| ||| ||  ||||| |||  ||| ||||||||||  ||||| ||||||||||||||    
T  42342249 gtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggactcataaactcattgccttaaggttttggg 42342150  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  |||||||||||||   |  ||| |||  ||||||||||||||||||||||||    
T  42342149 taagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 42342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 52634678 - 52634792
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  52634678 caagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccattgccttaaggttttgggtaa 52634776  T
Q  104 gtttgtggcgtctctc 119  Q
    |  |||| ||||||||    
T  52634777 gagtgtgacgtctctc 52634792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45395812 - 45395694
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||| ||||| ||| |||  ||| ||  |||||| |||||||||||| ||||||||    
T  45395812 gtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttggg 45395713  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  45395712 taagagtgtggtgtctctc 45395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 22304569 - 22304686
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||| |||  ||| ||| ||||||  ||||| |||||||||||||||    
T  22304569 tgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggt 22304668  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  22304669 aagagtgtggtgtctctc 22304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 32463057 - 32462941
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaa-ggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||| |||||||| ||| ||||||||| ||||||| |||||| |||  ||| |||||||||| |||||| |||||||||||| |||    
T  32463057 caagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagta 32462958  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  ||||| |||||||    
T  32462957 agagtgtggtgtctctc 32462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 15772853 - 15773010
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||| |||  ||| ||| ||||||  |||||  ||||||||||||     
T  15772853 gtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgga 15772952  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |||||||   |  |||||||  ||||| ||||||||||||||||||    
T  15772953 taagagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtggacggtcc 15773010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21832502 - 21832399
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||| | ||| || |||||||||||||||||||| |||  ||| ||||||||||  ||| | ||||||||||||||    
T  21832502 gtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttggg 21832403  T
Q  101 taag 104  Q
    ||||    
T  21832402 taag 21832399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 43346947 - 43346832
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  |||  || ||||||  ||||| |||||||||||||||||    
T  43346947 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaa 43346848  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  43346847 gagtgtggtgtctctc 43346832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 54018357 - 54018200
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||| |||||||||||| |||  ||| ||| |||||| | |  | ||||||||||||||    
T  54018357 gtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttggg 54018258  T
Q  101 taagtttgtggcgtctctca--caagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| ||||||||  |  |||||||  ||||||||||||||||| ||||||    
T  54018257 taagagtgtggtgtctctcatgcttgtgtggttgttctagcctcgatgtgggcggtcc 54018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 32462715 - 32462599
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagt-aaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||  ||||||  |||||| | ||||  |||||||||||| ||    
T  32462715 caagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggata 32462616  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  ||||| |||||||    
T  32462615 agagtgtggggtctctc 32462599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 50612610 - 50612503
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatc-----cattgtcttaaggttt 96  Q
    |||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||| |||  ||| ||||||||||||      ||| |||||||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaatctaacatattatcttaaggttt 50612511  T
Q  97 tgggtaag 104  Q
    ||||||||    
T  50612510 tgggtaag 50612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 9240148 - 9240300
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||||||||||| ||| |  |||||| | ||||||||||| |||  ||| ||| ||||||||||||  |||||| ||| ||     
T  9240148 gtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagatttcgga 9240247  T
Q  101 taagtttgtggcgtctctcaca--agtgtggt--ttctagcctcgatgtggac 149  Q
    ||||  ||||| ||||||| ||  |||| |||  |||||||||||||||||||    
T  9240248 taagaatgtggtgtctctctcaatagtgcggttattctagcctcgatgtggac 9240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 11661954 - 11662099
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaagg-ttttgggtaa 103  Q
    |||||||||||| |||  |||||| | ||||||||||||||||||||||||||| ||| |||| | |||||||| | |||| ||||||| ||||||||||    
T  11661954 aagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaa 11662053  T
Q  104 gtttgtggcgtctctcaca-agtgtggt--ttctagcctcgatgtg 146  Q
    |  || || ||||||| ||  |||||||  ||||||||||||||||    
T  11662054 gagtgaggtgtctctctcattgtgtggttgttctagcctcgatgtg 11662099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 41359920 - 41359767
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||     |||||||| ||| || ||||||||||||| |||||| |||  ||| ||| |||||| |||||| ||||||||||||||    
T  41359920 gtgcaagtgtgagttatc----ccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggttttggg 41359825  T
Q  101 taagtttgtggcgtctctcacaa--gtgtggtt--tctagcctcgatgtggacggtcc 154  Q
    ||||  ||||||||||||| |    ||||||||  |||||||||||||||| ||||||    
T  41359824 taagaatgtggcgtctctctcgcttgtgtggttgttctagcctcgatgtgggcggtcc 41359767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31190016 - 31190073
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  31190016 gtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacacctta 31190073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 37991133 - 37990974
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||  ||||| | |||||| |||||||||||||||||||| |||  ||| |||  |||||  ||| | |||||||||||||||||    
T  37991133 caagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaa 37991034  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtccatcag 159  Q
    |  ||||| |||||||   |   ||||||  |||||||||||||||||||||||| ||||    
T  37991033 gagtgtggtgtctctcttgcttatgtggttgttctagcctcgatgtggacggtccctcag 37990974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 22304246 - 22304301
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctt 57  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  22304246 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctt 22304301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25739584 - 25739427
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||| |||||||| | || |||  ||| ||| ||||||  |||||  || ||||||||||    
T  25739584 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttggg 25739485  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  |||| ||||||||   |  ||| |||  ||||||||||||||||||||||||    
T  25739484 taagagtgtgacgtctctctagcttgtgcggtagttctagcctcgatgtggacggtcc 25739427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32589703 - 32589805
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||| |||||| ||||||   |||||| | |||||||||||||||||| |||  ||| ||| |||||| |||||| ||||||||||||||    
T  32589703 gtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 32589801  T
Q  101 taag 104  Q
    ||||    
T  32589802 taag 32589805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 44160702 - 44160549
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||| ||||||||||| || || | |||||| | |||||||||||||||||| ||   ||| ||  |||||| |||||||||||||||||| |||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtcttaaggtttt-ggt 44160604  T
Q  102 aagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  |||||||||||||  |  || | |  ||||||||||||||||||||||||    
T  44160603 aagaatgtggcgtctctcttacttgcgattgttctagcctcgatgtggacggtcc 44160549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8327903 - 8328021
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||| | |||| |||  |||  || ||||||   | || ||||||||||||||    
T  8327903 gtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttggg 8328002  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  8328003 taagagtgtggtgtctctc 8328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 39935104 - 39935011
Alignment:
Q  11 gagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||| |||  ||| ||  |||||| |||||| ||||| |||||| |||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaag 39935011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43346649 - 43346706
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||    
T  43346649 gtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1634474 - 1634370
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaa-ggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    ||||||||||||||||||||| |||||||| ||| || | |||| |||| ||||| ||| |||  ||| ||| |||||| |||||| |||||||||||||    
T  1634474 gtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttgg 1634375  T
Q  100 gtaag 104  Q
    |||||    
T  1634374 gtaag 1634370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 49336843 - 49336728
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||| ||||  ||||||| ||| || |||||||||||| ||||||| |||  ||| ||| |||||| |||| ||||||| ||| |||||||    
T  49336843 caagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaa 49336744  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  49336743 gagtgtggtgtctctc 49336728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 51886561 - 51886612
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaaca 53  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  51886561 tgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaaca 51886612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 53577363 - 53577520
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||||||||| |||| ||   ||  ||  ||||||   |||| |||||||| |||||    
T  53577363 gtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttggg 53577462  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |||||||   ||||||||||  ||||||||||| |||||| |||||    
T  53577463 taagagtgtggtgtctctcttgcaagtgtggttgttctagcctcggtgtggatggtcc 53577520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 7767469 - 7767380
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggt 94  Q
    |||| |||||||||||| |||||||| ||| || ||||||||||| |||| ||| ||   ||| |||||||||| |||||||||||||||    
T  7767469 aagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccattgtcttaaggt 7767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 45901715 - 45901831
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaag-agtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||| |||||||| ||||||| |  ||||||||||||||||| |||  ||| ||| ||||||  ||| | ||||| ||||| ||||    
T  45901715 caagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttttggta 45901814  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  ||||| |||||||    
T  45901815 agagtgtggtgtctctc 45901831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 3135224 - 3135114
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttg 108  Q
    ||||||||||||| |||||||| |||||| |||||| ||||||||||||| |||  | |  || |||||| ||| || | |||||||||| |||||  ||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtg 3135125  T
Q  109 tggcgtctctc 119  Q
    ||| |||||||    
T  3135124 tggtgtctctc 3135114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 3135617 - 3135563
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||| |||| ||  ||||||||||||| |||||||||||||    
T  3135617 caagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacacctta 3135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 4823655 - 4823757
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||| ||  ||||||| |||||| |||||| ||| ||||||||| |||   || ||| ||||||  ||||| |||||| ||||||||    
T  4823655 tgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattgccttaagattttgggt 4823754  T
Q  102 aag 104  Q
    |||    
T  4823755 aag 4823757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 42584970 - 42584884
Alignment:
Q  12 agttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    |||||||||| |||||||| ||| |||||||||| |||||||||||| |||  ||| ||  |||||| | ||||||||||| |||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttg 42584884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 47964677 - 47964559
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||| ||||| || ||||| ||| ||  ||  ||||||||| |  || ||| |||| ||| |||||| | |||| ||||||||||||||    
T  47964677 gtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattgccttaaggttttggg 47964578  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  47964577 taagagtgtggcgtctctc 47964559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 47965074 - 47964956
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||||  |||||| ||| || |||  ||||| ||||   || ||| |||| | |||||||  |||||| |||||| |||||||    
T  47965074 gtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaagattttggg 47964975  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  47964974 taagagtgtggcgtctctc 47964956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39914251 - 39914308
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||||||  ||||||  |||||| |||| |||||||||||||||    
T  39914251 gtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacacctta 39914308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37726504 - 37726560
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||||  ||||||| |||||| |||||| |||||| ||||||    
T  37726504 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaatacctta 37726560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 7766854 - 7766785
Alignment:
Q  87 cttaaggttttgggtaagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||||||||| |||||| ||||||||||||||||  || ||||  ||||||||||||||| || |||||    
T  7766854 cttaaggttttaggtaagattgtggcgtctctcacttgtatggttgttctagcctcgatgtagatggtcc 7766785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 11661537 - 11661591
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||| |||||||| |||||| ||||| |||| |||| ||||    
T  11661537 caagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatctta 11661591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 33175820 - 33175766
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||  ||||||  ||| || ||||||||||||||||||||    
T  33175820 caagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacacctta 33175766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 33362421 - 33362336
Alignment:
Q  32 ataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    |||||| | ||||||||||| |||||| |||  ||| ||| |||||| |||||  |||||| |||||||||||  |||||||||||||    
T  33362421 ataaaataataaaggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaag--tgtggcgtctctc 33362336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 3875490 - 3875333
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||| || ||||||||||  ||||||| |||||| ||||||||||| |||||||| |||  ||| |||||||||| |||||| ||||||||||| ||    
T  3875490 gtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggttttagg 3875391  T
Q  101 taagtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |  |||||||| ||||||||  ||||||||||||||||||||||||    
T  3875390 taagaatgtggagtctctctcactagtgtggttgttctagcctcgatgtggacggtcc 3875333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 17294579 - 17294694
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  17294579 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaa 17294678  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  17294679 gagtgtggtgtctctc 17294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 26661678 - 26661563
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||| |||| ||| ||||||  ||||| |||||||||||||||||    
T  26661678 caagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaa 26661579  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  26661578 gagtgtggtgtctctc 26661563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 41759483 - 41759600
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||  ||||||| |||||| |||||| ||||||||||||| |||  ||||||  ||||||||||||| |||||||||||||||    
T  41759483 tgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggt 41759582  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  41759583 aagagtgtggtgtctctc 41759600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 44290983 - 44290882
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 44290884  T
Q  102 aa 103  Q
    ||    
T  44290883 aa 44290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 3550721 - 3550837
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  ||| |||||||||| |||||| ||||| ||||||||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggta 3550820  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  ||||| |||||||    
T  3550821 agagtgtggtgtctctc 3550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 34649440 - 34649594
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |  |  || |||||| | | || |||||||||||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaa 34649539  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  || ||||||||||   | ||||||||  ||||||||||||||||||||||||    
T  34649540 gagtgaggcgtctctcttgctagtgtggttgttctagcctcgatgtggacggtcc 34649594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41142371 - 41142529
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  | | ||| |||||| |||||| ||||||||||| ||    
T  41142371 gtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttgg 41142470  T
Q  101 t-aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    | |||  |||||||||||||   |  |||||||  ||||||||||||||||||||||||    
T  41142471 taaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 41142529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39066359 - 39066241
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||| ||   ||||||| ||||||  |||||||||||||||||||     
T  39066359 gtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttgga 39066260  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  39066259 taagagtgtggtgtctctc 39066241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 44290616 - 44290514
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||| |||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  44290616 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 44290517  T
Q  102 aag 104  Q
    |||    
T  44290516 aag 44290514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 14318875 - 14318984
Alignment:
Q  10 tgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgt 109  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||| |||  ||| ||| |||||||| |||| ||||||||||||||||||  |||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgt 14318974  T
Q  110 ggcgtctctc 119  Q
    || |||||||    
T  14318975 ggtgtctctc 14318984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 32594874 - 32594757
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||  ||| ||| ||||||  |||||||||||||||||||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggt 32594775  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  32594774 aagagtgtggtgtctctc 32594757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 26662054 - 26661939
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||| | ||| |||  ||||||||||||||||||||||||||| ||| |||| ||| |||||| | |||| |||||||||||||||||    
T  26662054 caagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaa 26661955  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  26661954 gagtgtggtgtctctc 26661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 5320123 - 5320021
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||||||||||| ||| || |||||| ||||||||||||| ||| |||| ||| ||||||  ||| | |||||||||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggt 5320024  T
Q  102 aag 104  Q
    |||    
T  5320023 aag 5320021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 29798199 - 29798355
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| | |||| | |||||| |||||||||||||||||||| |||  ||| |||||||||| |||||| |||||||| |||| |    
T  29798199 tgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggat 29798298  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   ||||||||||  ||||| ||||||| | ||||||||    
T  29798299 aagagtgtggtgtctctcttgcaagtgtggttgttctaacctcgatatagacggtcc 29798355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34364924 - 34365042
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| |||||| | |||||||||||||||||| |||  ||| ||| |||||| |||| | ||||||||||||||    
T  34364924 gtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttggg 34365023  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  34365024 taagagtgtggtgtctctc 34365042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 3537752 - 3537601
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtt 106  Q
    |||| |||||||||| |||||||| |||||| ||||||||||||||||||||  ||  ||| |||  ||||| |||||| ||||||||||||||||||      
T  3537752 gtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagag 3537653  T
Q  107 tgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||||||||||||   |  ||| |||  ||||||||||||||||||||||||    
T  3537652 tgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 3537601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 40082408 - 40082508
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    ||||||||||||||||||| | |||||| |||||| |||||||||||||||||||| |||  ||| || |||||||| ||||| ||||||||||||||||    
T  40082408 gcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaaggttttgggta 40082506  T
Q  103 ag 104  Q
    ||    
T  40082507 ag 40082508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 48588646 - 48588491
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||| ||||| | |||||| |||||| |||||||||||||||||||| |||  ||| ||| | ||||| ||||| |||||||||||||||    
T  48588646 tgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggt 48588547  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtc 153  Q
    |||  || || |||||||  ||  ||| |||  |||||||||||||||||||||||    
T  48588546 aagagtgcggtgtctctcttacttgtgcggttgttctagcctcgatgtggacggtc 48588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 11977282 - 11977436
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| ||||||||  ||||| |||||| ||||||||||||| |||  |||  ||||||||| | | || |||||||||||||||||    
T  11977282 caagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaa 11977381  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  ||||  |||||||   |||||| |||  ||||||||||||||||||||||||    
T  11977382 gagtgtgatgtctctcttgcaagtgcggttgttctagcctcgatgtggacggtcc 11977436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 5528902 - 5528795
Alignment:
Q  12 agttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtgg 111  Q
    ||||||||||  ||||||| |||||||||||||||||||||| |||| ||   ||| ||||||||||  |||| |||||||||||||||||| | |||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaactcattttcttaaggttttgggtaaatgtgtgg 5528803  T
Q  112 cgtctctc 119  Q
    ||||||||    
T  5528802 cgtctctc 5528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31767320 - 31767217
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||  ||| ||| ||| || | | || ||||||||||||||    
T  31767320 gtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttggg 31767221  T
Q  101 taag 104  Q
    ||||    
T  31767220 taag 31767217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41157374 - 41157477
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||| |||  ||| ||| |||||| |||||| ||| |||||||| |    
T  41157374 gtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggttttgag 41157473  T
Q  101 taag 104  Q
    ||||    
T  41157474 taag 41157477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22077654 - 22077536
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| ||| || |||||||||||||||||||| |||  ||| ||| ||||||  | | | ||||||||||||||    
T  22077654 gtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttggg 22077555  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  22077554 taagagtgtggcgtctctc 22077536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 50052178 - 50052064
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||| |||| |||  ||| ||| |||||| | ||| |||||| ||||||||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaagttttgggtaag 50052079  T
Q  105 tttgtggcgtctctc 119  Q
      ||||| |||||||    
T  50052078 agtgtggtgtctctc 50052064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41156990 - 41157107
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| |||||||| ||| | || ||||||||||||||||||||||||||| |||  ||| ||| ||||||  |||||  |||||||||||||    
T  41156990 gtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggg 41157089  T
Q  101 taagtttgtggcgtctct 118  Q
    ||||  ||||| ||||||    
T  41157090 taagagtgtggtgtctct 41157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 38804511 - 38804411
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||| ||| |||  ||| ||  |||||| ||||   |||||||||||||||||    
T  38804511 caagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaa 38804412  T
Q  104 g 104  Q
    |    
T  38804411 g 38804411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34364506 - 34364609
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| |||  ||| ||  | |||| |||| | ||||||||||||||    
T  34364506 gtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttggg 34364605  T
Q  101 taag 104  Q
    ||||    
T  34364606 taag 34364609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 37850759 - 37850602
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||| |||  |||  || |||||| | | ||| ||||||||| ||     
T  37850759 gtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcgga 37850660  T
Q  101 taagtttgtggcg--tctctcacaagtgtggtt--tctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| |  ||||||||  ||| ||||  |||||||||||||||||||||||    
T  37850659 taagagtgtggtgtctctctcacttgtgcggttgctctagcctcgatgtggacggtcc 37850602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41184584 - 41184489
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttt 96  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||| ||| |||  ||| ||| |||||| |||||| ||||||||||    
T  41184584 gtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24600473 - 24600355
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||| |||| ||| || |||||||||||||||  ||| |||  |||  |||||||||  |||||||||||||||||| |    
T  24600473 gtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtg 24600374  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  24600373 taagagtgtggtgtctctc 24600355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3537305 - 3537249
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  3537305 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctta 3537249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 37556113 - 37556228
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaat-aaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||||||||||||||||| |||||||| || |||| ||||||||||||||| |||| |||  ||| ||| |||||| |||| | ||||||||||||||||    
T  37556113 caagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagaggac-cataaacccatagccttaaggttttgggta 37556211  T
Q  103 agtttgtggcgtctctc 119  Q
    ||  ||||| |||||||    
T  37556212 agagtgtggtgtctctc 37556228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 44043935 - 44043813
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaa------aggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtt 95  Q
    ||||||||| |||||||||| ||||||||||||||| |||||      | ||||||||||||| |||  ||||||| |||||| ||||||||||||| ||    
T  44043935 tgcaagtgt-agttatatgtcccacatcgaataaaatagtaatagtaaatgttgaacaccttataagtaagatgacccataaacccattgtcttaagatt 44043837  T
Q  96 ttgggtaagtttgtggcgtctctc 119  Q
    |||||||||  ||||| |||||||    
T  44043836 ttgggtaagagtgtggtgtctctc 44043813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 66631 - 66528
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||  ||| ||  ||||||   || | ||||||||||||||    
T  66631 gtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggttttggg 66532  T
Q  101 taag 104  Q
    ||||    
T  66531 taag 66528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 5575110 - 5575221
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagttt 107  Q
    ||||| |||||||| |||| ||| ||| ||||||||||||||||||||||| |||  ||| |||  |||||||||| |  |||||||||||| ||||  |    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagt 5575209  T
Q  108 gtggcgtctctc 119  Q
    ||||||||||||    
T  5575210 gtggcgtctctc 5575221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1188747 - 1188629
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||||||| |||| ||| || |||  |||||||| |  ||| ||| |||| ||||||||||  |||||  |||||||||||||    
T  1188747 gtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaactcattgctttaaggttttggg 1188648  T
Q  101 taagtttgtggcgtctctc 119  Q
    |||   |||||||||||||    
T  1188647 taaaagtgtggcgtctctc 1188629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45084381 - 45084438
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||    
T  45084381 gtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacacctta 45084438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35154198 - 35154150
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttg 49  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  35154198 gtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 24132143 - 24131994
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||| |||||||||||||| || ||||| ||| || |||||||||||||||||||| ||   ||  ||  ||||||  ||||| ||||||| |||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaagg-tttgggt 24132045  T
Q  102 aagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacg 150  Q
    |||| ||  |  |||||||| ||||||||  ||||||||||||||| ||||    
T  24132044 aagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtagacg 24131994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 66248 - 66126
Alignment:
Q  1 gtgcaagtgtgagttat-atgttccacatcgaataaaagagtaaaggtt-gaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    |||||||||||||| || ||||  ||||||| ||| || |||||||||| |||||||||| |||  ||| ||| |||||| | || | ||||||||||||    
T  66248 gtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttg 66149  T
Q  99 ggtaagtttgtggcgtctctcac 121  Q
    ||||||  ||||||| |||||||    
T  66148 ggtaagagtgtggcgcctctcac 66126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 37555733 - 37555846
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||||||| || |||||||| |||||| ||| ||||||||| || ||| |||  ||| ||| | ||||||| | | ||||||||||||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggac-cttaaatccttagccttaaggttttgggtaag 37555831  T
Q  105 tttgtggcgtctctc 119  Q
      ||||| |||||||    
T  37555832 agtgtggtgtctctc 37555846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 45494137 - 45494083
Alignment:
Q  2 tgcaagtgtgagtt-atatgttccacatcgaataaaagagtaaaggttgaacacc 55  Q
    |||||||||||||| |||||| |||||||| |||||| |||||||||||||||||    
T  45494137 tgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaacacc 45494083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 11977009 - 11977100
Alignment:
Q  67 atgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||||||||||| | | || ||||||||||||||||||  ||||| |||||||   |||||| |||  ||||||||||||||||||||||||    
T  11977009 atgactcataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtcc 11977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 22793279 - 22793396
Alignment:
Q  3 gcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatcca-ttgtcttaaggttttgggt 101  Q
    ||||||||||||||||||| |||||||| ||| || |||| |||||||| || ||| ||| |||| ||  |||||| ||| ||| |||| ||||||| ||    
T  22793279 gcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagt 22793378  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||| ||||||||    
T  22793379 aagagtgtgacgtctctc 22793396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4878802 - 4878854
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaaca 53  Q
    |||||| ||||||||||||||||||||||| |||||| ||| ||| |||||||    
T  4878802 gtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaaca 4878854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 9955911 - 9956011
Alignment:
Q  6 agtgtgagttatatgttccacatc-gaataaaagagtaaaggttgaacaccttacaagcgagatgactca-taaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||| ||||||| ||  |||| |||||||||||||||| ||| |||  ||| ||| || |||| | |||| |||||||||||||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaa 9956010  T
Q  104 g 104  Q
    |    
T  9956011 g 9956011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 19283614 - 19283496
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||||| || ||| || |||  ||||||| ||| ||  ||  |||| ||| ||||||  ||| | |||||||||||||     
T  19283614 gtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaaggttttgga 19283515  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  19283514 taagagtgtggcgtctctc 19283496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22077987 - 22077871
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||||  | |||| ||| || | ||||||||||||| |||| |||  ||| ||| ||||||  ||| | | |||||||| |||    
T  22077987 gtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatag-cctaaggtttgggg 22077889  T
Q  101 taagtttgtggcgtctct 118  Q
    ||||  ||||||||||||    
T  22077888 taagagtgtggcgtctct 22077871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50469240 - 50469187
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacac 54  Q
    ||||||||||||||||||||| | |||||  |||| | ||||||||||||||||    
T  50469240 gtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacac 50469187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 29518503 - 29518659
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||  |||||||||||||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 29518602  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  ||| |||  ||||||||||||||||||||||||    
T  29518603 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 29518659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 29518920 - 29519076
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||  |||||||||||||||    
T  29518920 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 29519019  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  ||| |||  ||||||||||||||||||||||||    
T  29519020 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 29519076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 32741179 - 32741335
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||  |||||||||||||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 32741278  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  ||| |||  ||||||||||||||||||||||||    
T  32741279 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 32741335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 32460733 - 32460636
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| |||||||||| |||||| ||||||||||||||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaag 32460636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 2377756 - 2377856
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 2377855  T
Q  104 g 104  Q
    |    
T  2377856 g 2377856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 16107680 - 16107795
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||| ||||||||| |||  ||| |||||||||| |||||| |||||||||||||||||    
T  16107680 caagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaa 16107779  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  16107780 gagtgtggtgtctctc 16107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 593868 - 593766
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| |||  ||| |||||||||| | | || ||||||||||||||    
T  593868 gtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttggg 593769  T
Q  101 taa 103  Q
    |||    
T  593768 taa 593766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 1950340 - 1950226
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||| ||  |||||||| | || |||||||||||| |||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaag 1950241  T
Q  105 tttgtggcgtctctc 119  Q
      |||| ||||||||    
T  1950240 agtgtgacgtctctc 1950226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 2378126 - 2378282
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||  ||||||||||| |||    
T  2378126 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggt 2378225  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  | |||||  ||||||||||||||||||||||||    
T  2378226 aagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtcc 2378282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2580031 - 2579913
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||  ||| ||| |||||| |||  | ||||||||||||||    
T  2580031 gtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttggg 2579932  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  2579931 taagaatgtggtgtctctc 2579913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 35210204 - 35210306
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggt 35210303  T
Q  102 aag 104  Q
    |||    
T  35210304 aag 35210306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 1127360 - 1127477
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||| |||||||||||| | ||||||||  ||||| |||||||||||||||||||| |||  ||| |||||||||| |||||  |||||||||||||||    
T  1127360 tgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggt 1127459  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  |||||||||||||    
T  1127460 aagagtgtggcgtctctc 1127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 3409259 - 3409376
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  ||| ||| ||||||  ||||| |||||||||||||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 3409358  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  3409359 aagagtgtggtgtctctc 3409376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 10074522 - 10074371
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||| | || |||||||| ||| || |||||||||||||||||||| |||  ||| ||| ||||||  ||||| ||||||||||||||    
T  10074522 gtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttggg 10074423  T
Q  101 taagtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtgga 148  Q
    ||||  ||||| |  |||||||| ||||||||  ||||||||||||||||||    
T  10074422 taagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtgga 10074371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 14748496 - 14748344
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||   ||| ||| ||||||  |||||  ||||||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggt 14748397  T
Q  102 aagtttgtggcgtctctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||  ||||||  |  |||||||  ||||||||||||||||||||||||    
T  14748396 aagagtgtg--gtctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 14748344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 3058226 - 3058343
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||| |||||||||| |||||||| |||||| |||||||||||||||||||| |||   || ||  |||||| |||||| |||||||||||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggt 3058325  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  3058326 aagagtgtggtgtctctc 3058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 16454913 - 16455063
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagttt 107  Q
    |||||||||| ||| |||||||  ||||||||||||||||||||||||||| |||  | | ||| |||||| | |||| ||||||||||||||||||  |    
T  16454913 tgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagt 16455012  T
Q  108 gtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||||||||||   |  ||| |||  ||||||||||||||||||||||||    
T  16455013 gtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 16455063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 2578598 - 2578485
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||| ||| |||  ||| ||| |||||| |||| | |||||||||||||||||    
T  2578598 caagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaa 2578500  T
Q  104 gtttgtggcgtctct 118  Q
    |  ||||| ||||||    
T  2578499 gagtgtggtgtctct 2578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 3415462 - 3415575
Alignment:
Q  6 agtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagt 105  Q
    |||||||||||||||| |||||||  |||||| ||||||||||||||||| || |||  ||| ||| |||||| |||||| ||||||||||| ||||||     
T  3415462 agtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaaga 3415561  T
Q  106 ttgtggcgtctctc 119  Q
     ||||| |||||||    
T  3415562 gtgtggtgtctctc 3415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 10073773 - 10073613
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||| |||||||||| |||||||| | |||||  |||||||||||||||||| |||  ||| ||  ||||||  ||||| |||||| |||||||    
T  10073773 gtgcaagtgttagttatatgtcccacatcggagaaaag--taaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttggg 10073676  T
Q  101 taagtttgtggcg--tctctcacaagtgtggt--ttctagcctcgatgtggacggtccatcag 159  Q
    ||||  ||||| |  |||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  10073675 taagagtgtggtgtctctctcactagtgtggttgttctagcatcgatgtggacggtccttcag 10073613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 16108065 - 16108154
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaagg 93  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||  ||| ||| |||||| |||||| |||||||    
T  16108065 caagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaacccattgccttaagg 16108154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 1846748 - 1846864
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||| || |||||  ||||||| |||||| |||||||||||||||||||| |||  |||  || ||||||||||||| ||||||||||||| |    
T  1846748 tgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggat 1846847  T
Q  102 aagtttgtggcgtctct 118  Q
    |||  ||||| ||||||    
T  1846848 aagagtgtggtgtctct 1846864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 16454577 - 16454731
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||| ||| |||||||  |||||||| |||| ||||||||||||| |||  ||| ||| |||||| |||||| |||||| |||||| |||    
T  16454577 caagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataa 16454676  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  |||||||||||||   |  ||| |||  ||||||||||||||||||||||||    
T  16454677 gagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 16454731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 9062501 - 9062407
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||| |||| |||  ||| ||||||||||  ||||||||||| |||||||||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaactcattgtcttaa-gttttgggtaa 9062407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6071131 - 6071249
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||| ||||| || |||  ||||||||||| ||| ||| |||||||  ||||||  ||||| |||||| ||||||     
T  6071131 gtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaagattttgga 6071230  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  6071231 taagagtgtggcgtctctc 6071249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10074150 - 10074048
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||| ||||||||||| | |||||||| ||| || |||||| ||||||||||||| |||  ||| ||| |||||| |||||| ||||||||||||||    
T  10074150 gtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 10074051  T
Q  101 taa 103  Q
    |||    
T  10074050 taa 10074048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 26544049 - 26544151
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| |||  ||| ||| |||||| |||  | |||||||||||| ||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagt 26544148  T
Q  102 aag 104  Q
    |||    
T  26544149 aag 26544151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 3409660 - 3409816
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||  |||||| |||||| |||||||| |||| |||  ||| ||| |||||| |||||| ||| |  ||||||||    
T  3409660 tgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggacccataaacccattgcctttattttttgggt 3409759  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  ||||| |||||||   |  ||| |||  ||||||||||||||||||||||||    
T  3409760 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 3409816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8481926 - 8482043
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||  ||| || |||  ||||||||||| ||| ||  |||||||||||||||  ||||| |||||| |||||||    
T  8481926 gtgcaagtgtgagttatatgt-ccacatcagatataaaagtggaggttgaacactttataaatgagatgactcataaactcattgccttaagattttggg 8482024  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  8482025 taagagtgtggtgtctctc 8482043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 2975567 - 2975648
Alignment:
Q  17 tatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    ||||| ||||||| |||| || |||||| ||||||||||||| |||| ||||||| ||||||||| ||||||||| ||||||    
T  2975567 tatgtcccacatcaaatagaaaagtaaatgttgaacaccttataagcaagatgacccataaatcctttgtcttaaagttttg 2975648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 5832182 - 5832029
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||    |||||| ||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaagcca-ccccttaagattttgggtaa 5832084  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
       ||||| |||||||  ||  |||||||  ||||||||||||||| ||||||||    
T  5832083 aagtgtggtgtctctcttacttgtgtggttgttctagcctcgatgtagacggtcc 5832029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5958762 - 5958663
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||| ||||||||||||||   |||||| |||||| |||||||||||||||||||| ||   |||  |||||||||  ||||||||||| ||||||||    
T  5958762 gtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaagttttggg 5958663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 2579261 - 2579207
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||    
T  2579261 caagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacacctta 2579207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 6999951 - 6999837
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||| | |||||| |||||| |||||| ||||||||||||| | |  ||| ||  ||||||  || || ||||||||||||| ||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataag 6999852  T
Q  105 tttgtggcgtctctc 119  Q
      |||||||||||||    
T  6999851 agtgtggcgtctctc 6999837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 2843560 - 2843657
Alignment:
Q  8 tgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatga-ctcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||| ||||||| |||||| | |||| ||||||||||||| |||  ||| || | ||||||  ||||| ||||||||||||||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaag 2843657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 10911565 - 10911662
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaaga-gtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    |||||||||||||||||||| | |||||  |||||| | ||||||||||||||||||| |||  ||| ||||||||||  ||||| ||||| ||||||    
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaagttttg 10911662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 2579645 - 2579549
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||| |||||||| | |||| ||||||||| | | |||||| |||  ||| | | ||||||  ||||| |||||||||||||||||    
T  2579645 gtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaa 2579549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 12085125 - 12085075
Alignment:
Q  69 gactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    |||||||||| |||| | ||||||||||||||||||  |||||||||||||    
T  12085125 gactcataaaaccatggccttaaggttttgggtaagagtgtggcgtctctc 12085075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 12071764 - 12071693
Alignment:
Q  87 cttaaggttttgggtaagtttgtggcgtc--tctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||||||||||||||||  |||||||||  ||||||  |||||||  |||||||||||||||| |||||||    
T  12071764 cttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtcc 12071693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 3669687 - 3669804
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  ||| ||||||||||  ||||| |||||||||||||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggt 3669786  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  3669787 aagagtgtggtgtctctc 3669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 3038446 - 3038292
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| |||  | | ||| |||||| |||||| |||||||||||||||||    
T  3038446 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaa 3038347  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |  |||||| ||||||   |  |||||||  ||||||||||||||||||||||||    
T  3038346 gagtgtggcatctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 3038292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 30359273 - 30359388
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||| |||| ||| ||| |||||| |||| | |||||||||||||||||    
T  30359273 caagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaa 30359372  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  30359373 gagtgtggtgtctctc 30359388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 34834878 - 34834993
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||| | |||||| |||||||||| ||||||||| |||  ||||||||||||||  ||||| |||||||||||||||||    
T  34834878 caagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaa 34834977  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  34834978 gagtgtggtgtctctc 34834993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 147454 - 147568
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||   ||| ||| |||||| | |||| ||||| ||||||||||||    
T  147454 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaag 147553  T
Q  105 tttgtggcgtctctc 119  Q
      |||||||||||||    
T  147554 agtgtggcgtctctc 147568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9309354 - 9309510
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||  ||| ||| | ||||  ||||| |||||||| | |||    
T  9309354 gtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaaggtgtcggg 9309453  T
Q  101 taagtttgtggcgtctctcaca-agtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    ||||  ||||| ||||||| ||   ||||||  ||||||||||||||||||||||||    
T  9309454 taagagtgtggtgtctctctcagtatgtggttgttctagcctcgatgtggacggtcc 9309510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 45122069 - 45121952
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| |||  ||| ||||||||||  ||||| |||||| |||||||    
T  45122069 gtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttggg 45121970  T
Q  101 taagtttgtggcgtctct 118  Q
    |||   ||||||||||||    
T  45121969 taacagtgtggcgtctct 45121952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9608744 - 9608898
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| ||| |||| ||| || |||||||||||||||||||| |||  ||||||| |||||| ||||   ||||||||||||||    
T  9608744 gtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttggg 9608843  T
Q  101 taagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacgg 151  Q
    || |  |||||||||||||   | |||| |||  |||||||||||||||||||||    
T  9608844 tatgagtgtggcgtctctcttgctagtgaggttgttctagcctcgatgtggacgg 9608898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 25561972 - 25561876
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||  ||| ||| ||||||  ||||||||||||||||||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggg 25561876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45122216 - 45122098
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| |||  |||  || ||||||  |||| |||||||||||||||    
T  45122216 gtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttggg 45122117  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  45122116 taagagtgtggtgtctctc 45122098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45123005 - 45123106
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||| ||||||||  |||  ||||||| |||||| | ||| |||||||||||||||    
T  45123005 gtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacctt--aagtaagatgacccataaacctattttcttaaggttttggg 45123102  T
Q  101 taag 104  Q
    ||||    
T  45123103 taag 45123106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 9483320 - 9483229
Alignment:
Q  27 atcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctct 118  Q
    |||| ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||||||||||||||||||||||  ||||| ||||||    
T  9483320 atcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 9483229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 3670060 - 3670177
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||| ||||||||| |||   || ||| |||||| | |||  |||||||||||||||    
T  3670060 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggt 3670159  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  3670160 aagagtgtggtgtctctc 3670177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 1514071 - 1513917
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||| |||||||||| | |||||||| ||||||||||||||||||||||||||| |||  ||| ||| | |||| ||||   |||||||||||||||||    
T  1514071 caagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaa 1513972  T
Q  104 gtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
       |||||  ||||||  ||| ||| |||  ||||||||||||||||||||||||    
T  1513971 aagtgtggtatctctcttacatgtggggttattctagcctcgatgtggacggtcc 1513917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6877022 - 6876918
Alignment:
Q  1 gtgcaagtgtgagttatat-gttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    ||||||||||||||||||| || |||||||| |||||| |||||||||||||||||||| ||   ||||||| |||| |  |||||||||| ||||||||    
T  6877022 gtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagggttttgg 6876923  T
Q  100 gtaag 104  Q
    |||||    
T  6876922 gtaag 6876918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 30359611 - 30359726
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||||||  ||||||  ||||||||||||| ||||||||||||| |||  ||| |||||||||| ||||   |||||| ||||||||||    
T  30359611 caagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaa 30359710  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  30359711 gagtgtggtgtctctc 30359726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 40518071 - 40518227
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaaga--gtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||||||| | |||||| |  ||||||||||||||||||| |||  |   ||| |||||| ||| || |||||||||||||||    
T  40518071 caagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggt 40518170  T
Q  102 aagtttgtggcgtctctc--acaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  |||||||||||||   |  |||||||  ||||||||| ||||||||||||||    
T  40518171 aagagtgtggcgtctctcttgcttgtgtggttgttctagccttgatgtggacggtcc 40518227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 5420651 - 5420807
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||  |||||||| |||||||| ||| || ||||||||||||||| |||| |||  ||| |||||||||| |||||| |||||||||||  ||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgt 5420750  T
Q  102 aagtttgtggcgtct--ctcacaagtgtggt--ttctagcctcgatgtggacggtcc 154  Q
    |||  |||| |||||  |||||  |||||||  ||| ||||||||||||||| ||||    
T  5420751 aagagtgtgacgtctccctcacttgtgtggttgttcaagcctcgatgtggaccgtcc 5420807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 9482755 - 9482666
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| || ||| |||||    
T  9482755 gtgagttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttg 9482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41972157 - 41972254
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    ||||||||||||||||||||| |||||||| ||| || |||||||||||||||||||| ||| || | ||| |||||| |||||| | ||| ||||||    
T  41972157 gtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgccataaagttttg 41972254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 45122648 - 45122741
Alignment:
Q  26 catcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    ||||| |||||| |||||||||||||||||||| |||  ||| ||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  45122648 catcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctc 45122741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 30441081 - 30441202
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacc----ttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    |||||||||||||||||||| ||||||||  ||||| |||||||||||||||||    ||| |||  ||| | | |||||| |||||| |||||||||||    
T  30441081 tgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaaggtttt 30441180  T
Q  98 gggtaagtttgtggcgtctctc 119  Q
    |||||||  ||||| |||||||    
T  30441181 gggtaagagtgtggtgtctctc 30441202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 34835211 - 34835311
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||| ||||||||||||| |||||||  |||||| |||||||||||||||||||| |||  ||| ||| ||||||  ||||| ||||| |||||||||||    
T  34835211 caagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaa 34835310  T
Q  104 g 104  Q
    |    
T  34835311 g 34835311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 37544646 - 37544546
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||||||||| ||  ||||||| |||||| |||||||||||||||| ||| |||  ||| ||| ||||||||||||   ||||||||||||||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaa 37544547  T
Q  104 g 104  Q
    |    
T  37544546 g 37544546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 40518584 - 40518684
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||||  ||| || |||||||||||||||||||| ||   ||| ||| |||||| ||| || |||||||||||||||||    
T  40518584 caagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaa 40518683  T
Q  104 g 104  Q
    |    
T  40518684 g 40518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 70425 - 70330
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||| |||| |||  ||| ||| |||||| ||| || ||||||||||| ||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaag 70330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8918923 - 8918820
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||| |||| |||||||  |||  |||||||||||||||||| ||| |||  ||| ||| |||||| | |||| ||||||||||||||    
T  8918923 gtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttggg 8918824  T
Q  101 taag 104  Q
    ||||    
T  8918823 taag 8918820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 43274934 - 43274835
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||| |  ||| |||  ||| ||| |||||| | ||||||||||||||||| |||||    
T  43274934 aagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttgagtaag 43274835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 1014029 - 1013927
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| || |||  ||| |||  ||||| |||||| ||||  |||||| ||    
T  1014029 tgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagt 1013930  T
Q  102 aag 104  Q
    |||    
T  1013929 aag 1013927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 3037865 - 3037776
Alignment:
Q  5 aagtgtgagttatat--gttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaag 92  Q
    |||||||||||||||  ||||||||||| || ||| |||||| ||||||||||||| |||  ||| |||||||||| |||||||||||||    
T  3037865 aagtgtgagttatatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccattgtcttaag 3037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 8794113 - 8794210
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||  ||||||| |||||||| |||| |||||||| |||| |||  ||| |||||||||| | | | ||||||||||||||||    
T  8794113 caagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggt 8794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9507776 - 9507898
Alignment:
Q  1 gtgcaagtgtgagttatatgt--tccacatcgaataaaag---agtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtt 95  Q
    ||||||||||||||||||| |  |||| || | |||||||   ||||||||||||| |||||| |||  ||| |||||||||| |||||  |||||||||    
T  9507776 gtgcaagtgtgagttatatctcctccatattggataaaagtacagtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggtt 9507875  T
Q  96 ttgggtaagtttgtggcgtctct 118  Q
    |||||||||  ||||||||||||    
T  9507876 ttgggtaagagtgtggcgtctct 9507898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 18372142 - 18372050
Alignment:
Q  12 agttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaag 104  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||| |||  ||| ||  ||||||  |||||  |||||||||||||||||    
T  18372142 agttatatgtaccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaag 18372050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 18380171 - 18380119
Alignment:
Q  6 agtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacacctta 18380119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 20870733 - 20870614
Alignment:
Q  2 tgcaagtgtgagttatat--gttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgg 99  Q
    ||||||||||||||||||  ||||||||||  |||||| ||||||||||||||| |||| |||  ||| ||| |||||| ||| || |||||| ||||||    
T  20870733 tgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaagattttgg 20870634  T
Q  100 gtaagtttgtggcgtctctc 119  Q
     ||||  ||||| |||||||    
T  20870633 ataagagtgtggtgtctctc 20870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 33113523 - 33113408
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||| |||||||||||| | |||||| |||||| ||||||||||||||  |||| |||  ||| ||| ||||||  ||||| |||||| ||||||||||    
T  33113523 caagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaa 33113424  T
Q  104 gtttgtggcgtctctc 119  Q
    |  ||||| |||||||    
T  33113423 gagtgtggtgtctctc 33113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4154825 - 4154707
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    ||||||||||||||||||||| |||||||  ||| || |||  ||||||||||| ||| ||| || | ||| ||||||  ||||| |  |||||||||||    
T  4154825 gtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttggg 4154726  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  |||||||||||||    
T  4154725 taagagtgtggcgtctctc 4154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 25561792 - 25561746
Alignment:
Q  12 agttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacacctta 25561746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 6731904 - 6731953
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaa 51  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  6731904 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 18372411 - 18372358
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  18372411 aagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacacctta 18372358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 18372854 - 18372801
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  18372854 aagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacacctta 18372801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 41416322 - 41416273
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctta 41416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9308976 - 9309077
Alignment:
Q  1 gtgcaagtgtgagttatatgttc--cacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttg 98  Q
    ||||||||||||||||||||| |  ||||||  ||||||||||||| ||||||||  ||| |||  ||| ||| |||||| |||||| || |||||||||    
T  9308976 gtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttg 9309075  T
Q  99 gg 100  Q
    ||    
T  9309076 gg 9309077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 18372758 - 18372662
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||| ||||||||||||  ||| |||||| ||||||||||||||| |||| |||  ||| |||||||||| |||||| |   |||||||||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaacccattgcc---aggttttgggtaa 18372663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 40579662 - 40579548
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    ||||||||| ||||||||| || || | |||||| |||||||||||||||||||| |||  ||| ||| ||||||   ||||  |||||||||| |||||    
T  40579662 caagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggttttaggtaa 40579563  T
Q  104 gtttgtggcgtctct 118  Q
    |  ||||| ||||||    
T  40579562 gagtgtggtgtctct 40579548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 1014403 - 1014286
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggt 101  Q
    ||||||||||||||||||||   |||||  |||||| |||||||||||||||||||| |||  ||| ||| | ||||  | ||  ||||| |||||||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggt 1014304  T
Q  102 aagtttgtggcgtctctc 119  Q
    |||  ||||| |||||||    
T  1014303 aagagtgtggtgtctctc 1014286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 147828 - 147880
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaaca 53  Q
    ||||||||||||||||||||| |||||||  |||||| |||||| ||||||||    
T  147828 gtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 9609122 - 9609202
Alignment:
Q  39 agtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    ||||||||||||||| |||| |||  ||||||| |||||| |||| | ||||| ||||| ||||||  |||||||||||||    
T  9609122 agtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctc 9609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 18373085 - 18373033
Alignment:
Q  6 agtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||| |||||||| |||| ||| |||||| ||||||||||||||||||||    
T  18373085 agtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacacctta 18373033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 32640682 - 32640634
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaaca 53  Q
    ||||||||||||| |||  ||||||| ||||||||||||||||||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaaca 32640634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5274774 - 5274877
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||| |||||||||||||| |||| |||||||| || | ||||||||||| ||| ||  | || ||| ||||||  ||||| |||||| ||||| |    
T  5274774 gtgcaagtatgagttatatgttctacattgaataaaaaaggagaggttgaacactttataaatgggaagacccataaaatcattgccttaagattttgag 5274873  T
Q  101 taag 104  Q
    ||||    
T  5274874 taag 5274877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 12156748 - 12156714
Alignment:
Q  70 actcataaatccattgtcttaaggttttgggtaag 104  Q
    ||||||||| |||||||||||||||||||||||||    
T  12156748 actcataaacccattgtcttaaggttttgggtaag 12156714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 20130454 - 20130504
Alignment:
Q  7 gtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctt 57  Q
    ||||||| |||||||  ||||||| ||||||||||||| ||||||||||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt 20130504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 45121811 - 45121758
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||| | ||| |||||||| ||||||||||||||||||| |||||||    
T  45121811 caagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttgatcacctta 45121758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 18372526 - 18372485
Alignment:
Q  5 aagtgtgagttatatgttccacatcgaataaaagagtaaagg 46  Q
    ||||||||||||||||| |||||||| |||||| ||||||||    
T  18372526 aagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 34835476 - 34835577
Alignment:
Q  4 caagtgtgagttatatgttccacatcga-ataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||| ||||||||||||| |||| ||   |||||| |||||||||| ||||||||| |||  ||| ||| ||||||  ||||| ||||| ||||||||||    
T  34835476 caagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggta 34835575  T
Q  103 ag 104  Q
    ||    
T  34835576 ag 34835577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 34835742 - 34835843
Alignment:
Q  4 caagtgtgagttatatgttccacatcga-ataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggta 102  Q
    |||| ||||||||||||| |||| ||   |||||| |||||||||| ||||||||| |||  ||| ||| ||||||  ||||| ||||| ||||||||||    
T  34835742 caagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggta 34835841  T
Q  103 ag 104  Q
    ||    
T  34835842 ag 34835843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 18371807 - 18371763
Alignment:
Q  9 gtgagttatatgttccacatcgaataaaagagtaaaggttgaaca 53  Q
    |||||||||||||  ||||||| |||||| |||||||||||||||    
T  18371807 gtgagttatatgtcacacatcggataaaatagtaaaggttgaaca 18371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 32305507 - 32305591
Alignment:
Q  32 ataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtct 116  Q
    |||||| |||||||||||||||||||| |||  ||| |||  ||||| |||||  |||||| |||||| ||||  ||||||||||    
T  32305507 ataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtct 32305591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 670 - 570
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||||||||||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 571  T
Q  104 g 104  Q
    |    
T  570 g 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 300 - 244
Alignment:
Q  2 tgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  300 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctta 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 1262 - 1162
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaa 103  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||||||| |||  | | |||||||||| |||||| |||||||||||||||||    
T  1262 caagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaa 1163  T
Q  104 g 104  Q
    |    
T  1162 g 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3144 - 3092
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaaca 53  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3144 gtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 1802 - 1732
Alignment:
Q  49 gaacaccttacaagcgagatgactcataaatccattgtcttaaggttttgggtaagtttgtggcgtctctc 119  Q
    |||||||||| ||| |||| ||| |||||| |||||| ||||||||||| ||||||  ||||| |||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctc 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5356 - 5474
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||  ||| ||| |||||| |||||| |||||| ||||||     
T  5356 gtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgga 5455  T
Q  101 taagtttgtggcgtctctc 119  Q
    ||||  ||||| |||||||    
T  5456 taagagtgtggtgtctctc 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5776 - 5867
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaag 92  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| |||  ||| ||| |||||| |||||| ||||||    
T  5776 gtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5395 - 5514
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtctt-aaggttttgg 99  Q
    ||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||| |||  ||| | | ||||||   |||||||| ||| ||||||    
T  5395 gtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaacatattgtcttaaagtttttgg 5494  T
Q  100 gtaagtttgtggcgtctctc 119  Q
    |||||  ||||| |||||||    
T  5495 gtaagagtgtggtgtctctc 5514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17615 - 17519
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggtttt 97  Q
    |||||||||||||||||||||  ||||||  |||||| |||||||||||||||||||  |||  ||| ||| |||||| |||| | |||||||||||    
T  17615 gtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagccttaaggtttt 17519  T

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Target: scaffold0504 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 10267 - 10213
Alignment:
Q  4 caagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacacctta 58  Q
    ||||||||||||||||||  ||||||| ||||||  ||||| |||||||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacacctta 10213  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47359 - 47461
Alignment:
Q  1 gtgcaagtgtgagttatatgttccacatcgaataaaagagtaaaggttgaacaccttacaagcgagatgactcataaatccattgtcttaaggttttggg 100  Q
    |||||||||||| ||| ||||  ||||||  |||||| ||||||| |||||||||||| |||  |||  |  |||||| |||||| ||||| ||||||||    
T  47359 gtgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaaagttttggg 47458  T
Q  101 taa 103  Q
    |||    
T  47459 taa 47461  T

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