View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20945_low_10 (Length: 227)
Name: NF20945_low_10
Description: NF20945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20945_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 45655053 - 45654834
Alignment:
| Q |
7 |
aataaccctaccctccataccatatgctattgttatcacttttcccataaattcgtttatgcttttccaaagtgcttgagtgattgatttctctcaatac |
106 |
Q |
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| T |
45655053 |
aataaccctaccctccataccatatgctattgttatcacttttcccataaattcgtttatgcttttccaaagtgcttgagtgattgatttatctcaatac |
45654954 |
T |
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| Q |
107 |
ctcccatgggcttcttgttgtccctctatttaatttaacttttaacacacgttcttatctttaacaatccctttccccacaagacacacaccgtgtgcac |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
45654953 |
ctcccatgggcttcttgttgtccctctatttaatttaac-tttaacacacgttcttatctttaacaatccctttccccacaagacacacaccgggtgcac |
45654855 |
T |
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| Q |
207 |
caagtgagggtcaaacattaa |
227 |
Q |
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||||||||||||||||||||| |
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| T |
45654854 |
caagtgagggtcaaacattaa |
45654834 |
T |
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