View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20946_high_14 (Length: 434)

Name: NF20946_high_14
Description: NF20946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20946_high_14
NF20946_high_14
[»] chr1 (36 HSPs)
chr1 (140-418)||(30848993-30849269)
chr1 (50-177)||(23891663-23891790)
chr1 (50-177)||(3377695-3377822)
chr1 (128-182)||(39642198-39642252)
chr1 (50-179)||(6569528-6569657)
chr1 (50-114)||(30849287-30849350)
chr1 (50-113)||(7060696-7060759)
chr1 (85-177)||(14979019-14979111)
chr1 (129-177)||(18632602-18632650)
chr1 (131-183)||(46912187-46912239)
chr1 (50-181)||(50401556-50401686)
chr1 (64-174)||(23220759-23220869)
chr1 (67-181)||(41997639-41997753)
chr1 (133-177)||(25486479-25486523)
chr1 (125-177)||(42924331-42924383)
chr1 (125-183)||(3377498-3377556)
chr1 (127-177)||(25085402-25085452)
chr1 (130-183)||(11050430-11050482)
chr1 (127-183)||(1096711-1096767)
chr1 (125-177)||(3814763-3814815)
chr1 (135-179)||(16874509-16874553)
chr1 (125-181)||(17692726-17692782)
chr1 (125-177)||(37008220-37008272)
chr1 (132-180)||(46880738-46880786)
chr1 (1-32)||(7060779-7060810)
chr1 (125-184)||(17760678-17760737)
chr1 (129-180)||(45739196-45739247)
chr1 (52-183)||(46573012-46573144)
chr1 (64-114)||(12960912-12960962)
chr1 (54-177)||(45738939-45739061)
chr1 (50-99)||(25486395-25486444)
chr1 (126-183)||(51250482-51250539)
chr1 (125-177)||(5287833-5287885)
chr1 (125-177)||(6320840-6320891)
chr1 (126-182)||(7579661-7579717)
chr1 (125-181)||(15659253-15659309)
[»] chr7 (33 HSPs)
chr7 (50-183)||(4049905-4050038)
chr7 (73-177)||(36580277-36580381)
chr7 (87-183)||(14247291-14247387)
chr7 (64-183)||(20185114-20185232)
chr7 (56-183)||(17876347-17876474)
chr7 (127-181)||(19645062-19645116)
chr7 (125-183)||(28350113-28350171)
chr7 (73-177)||(3247380-3247482)
chr7 (134-177)||(21748082-21748125)
chr7 (125-176)||(28785760-28785811)
chr7 (127-177)||(8074136-8074186)
chr7 (127-177)||(23826283-23826333)
chr7 (125-181)||(20505097-20505153)
chr7 (125-177)||(21939333-21939385)
chr7 (125-177)||(45697490-45697542)
chr7 (127-177)||(11373850-11373900)
chr7 (132-182)||(15348224-15348274)
chr7 (131-183)||(3382085-3382137)
chr7 (125-177)||(6726518-6726570)
chr7 (125-181)||(6792055-6792111)
chr7 (125-177)||(9500161-9500213)
chr7 (53-181)||(18186438-18186567)
chr7 (125-177)||(20505268-20505320)
chr7 (127-179)||(23746155-23746207)
chr7 (50-183)||(35250303-35250433)
chr7 (125-177)||(47909697-47909749)
chr7 (132-183)||(18504505-18504556)
chr7 (125-160)||(24432978-24433013)
chr7 (125-177)||(282860-282912)
chr7 (125-177)||(327437-327489)
chr7 (50-114)||(5172707-5172771)
chr7 (125-177)||(41243903-41243955)
chr7 (127-183)||(48058858-48058914)
[»] chr3 (43 HSPs)
chr3 (68-182)||(28712663-28712777)
chr3 (50-177)||(3192965-3193092)
chr3 (53-181)||(4474256-4474382)
chr3 (50-182)||(43747277-43747409)
chr3 (50-183)||(54718991-54719121)
chr3 (64-183)||(17773167-17773286)
chr3 (64-183)||(19074468-19074587)
chr3 (68-177)||(38958046-38958154)
chr3 (50-177)||(28204483-28204608)
chr3 (74-177)||(19404401-19404503)
chr3 (125-177)||(46226946-46226998)
chr3 (50-177)||(14856549-14856677)
chr3 (125-180)||(44586045-44586100)
chr3 (131-177)||(48348258-48348304)
chr3 (50-177)||(53184701-53184828)
chr3 (125-182)||(14340731-14340788)
chr3 (125-177)||(86823-86875)
chr3 (133-177)||(14349375-14349419)
chr3 (50-114)||(25902469-25902532)
chr3 (125-177)||(33329614-33329666)
chr3 (125-177)||(36677527-36677579)
chr3 (125-177)||(36687609-36687661)
chr3 (50-114)||(44585854-44585918)
chr3 (125-177)||(51315743-51315795)
chr3 (127-177)||(35359245-35359295)
chr3 (125-182)||(20432188-20432245)
chr3 (127-183)||(12759500-12759556)
chr3 (125-177)||(27178143-27178194)
chr3 (125-177)||(47189601-47189653)
chr3 (50-174)||(52008433-52008554)
chr3 (125-180)||(25843596-25843651)
chr3 (133-184)||(38178720-38178771)
chr3 (130-177)||(44433058-44433104)
chr3 (50-183)||(54464346-54464480)
chr3 (68-114)||(15978893-15978939)
chr3 (125-183)||(33329881-33329939)
chr3 (64-114)||(44436455-44436505)
chr3 (125-182)||(25902612-25902669)
chr3 (53-113)||(8024842-8024902)
chr3 (126-182)||(14856814-14856870)
chr3 (129-181)||(14992882-14992934)
chr3 (129-177)||(28944228-28944276)
chr3 (65-113)||(51315562-51315610)
[»] chr2 (42 HSPs)
chr2 (63-177)||(34679289-34679401)
chr2 (64-179)||(6510197-6510312)
chr2 (64-182)||(37431735-37431853)
chr2 (50-177)||(15023022-15023149)
chr2 (127-177)||(14489471-14489521)
chr2 (296-418)||(15358803-15358923)
chr2 (125-182)||(21358364-21358421)
chr2 (125-177)||(16043284-16043336)
chr2 (133-181)||(34761127-34761175)
chr2 (129-183)||(2609075-2609129)
chr2 (50-177)||(19206145-19206271)
chr2 (123-177)||(32969784-32969838)
chr2 (68-182)||(35718857-35718971)
chr2 (129-177)||(18709250-18709298)
chr2 (127-177)||(5362178-5362228)
chr2 (50-169)||(6592918-6593035)
chr2 (125-174)||(20650376-20650425)
chr2 (125-182)||(43029053-43029109)
chr2 (127-183)||(14489211-14489267)
chr2 (125-177)||(14816056-14816108)
chr2 (50-167)||(14943549-14943666)
chr2 (125-177)||(36176984-36177036)
chr2 (125-177)||(39918437-39918489)
chr2 (125-179)||(4576544-4576598)
chr2 (133-179)||(5470331-5470377)
chr2 (131-177)||(19399440-19399486)
chr2 (135-177)||(31827800-31827842)
chr2 (125-183)||(43028791-43028849)
chr2 (125-182)||(25378-25435)
chr2 (125-174)||(5470594-5470643)
chr2 (132-181)||(12948888-12948937)
chr2 (129-182)||(34679095-34679148)
chr2 (132-177)||(37803398-37803443)
chr2 (129-177)||(4925706-4925754)
chr2 (125-177)||(6592727-6592779)
chr2 (131-183)||(14943808-14943860)
chr2 (125-177)||(19895616-19895668)
chr2 (125-181)||(21631817-21631873)
chr2 (296-378)||(31395142-31395223)
chr2 (127-183)||(36177351-36177407)
chr2 (50-94)||(36715388-36715432)
chr2 (50-114)||(39918625-39918689)
[»] chr4 (49 HSPs)
chr4 (64-179)||(14449274-14449390)
chr4 (125-182)||(35383763-35383820)
chr4 (50-177)||(53924750-53924876)
chr4 (127-183)||(43074613-43074669)
chr4 (67-183)||(23759558-23759674)
chr4 (125-177)||(50769620-50769672)
chr4 (73-177)||(1420538-1420642)
chr4 (50-183)||(10059679-10059814)
chr4 (50-177)||(35393852-35393980)
chr4 (133-183)||(4411493-4411543)
chr4 (125-179)||(8965523-8965577)
chr4 (67-177)||(2181325-2181435)
chr4 (132-181)||(51362806-51362855)
chr4 (125-177)||(2653956-2654008)
chr4 (133-181)||(16292534-16292582)
chr4 (125-180)||(37831592-37831647)
chr4 (131-182)||(51371728-51371779)
chr4 (132-183)||(53312551-53312602)
chr4 (131-177)||(6207179-6207225)
chr4 (128-177)||(27978958-27979007)
chr4 (66-176)||(14060760-14060869)
chr4 (127-183)||(19909170-19909226)
chr4 (125-177)||(25909490-25909542)
chr4 (125-177)||(49185818-49185869)
chr4 (130-177)||(6614850-6614897)
chr4 (130-177)||(11824462-11824509)
chr4 (131-182)||(29697786-29697837)
chr4 (125-180)||(50769363-50769418)
chr4 (50-113)||(52462846-52462909)
chr4 (125-183)||(3369844-3369902)
chr4 (132-182)||(3658190-3658240)
chr4 (127-177)||(6207437-6207487)
chr4 (125-183)||(12719705-12719763)
chr4 (131-177)||(35615433-35615478)
chr4 (125-183)||(51362533-51362591)
chr4 (125-182)||(12719449-12719506)
chr4 (129-177)||(1571669-1571717)
chr4 (125-169)||(2837160-2837204)
chr4 (129-177)||(14016723-14016771)
chr4 (122-182)||(21451457-21451517)
chr4 (140-176)||(21871407-21871443)
chr4 (140-176)||(21927268-21927304)
chr4 (129-177)||(21957730-21957778)
chr4 (125-177)||(35615317-35615369)
chr4 (125-177)||(41148559-41148611)
chr4 (125-181)||(47742230-47742286)
chr4 (125-177)||(49185574-49185625)
chr4 (125-177)||(53312289-53312341)
chr4 (125-177)||(54983851-54983902)
[»] chr5 (32 HSPs)
chr5 (50-177)||(32391722-32391849)
chr5 (50-183)||(3999083-3999216)
chr5 (50-178)||(3333694-3333822)
chr5 (126-177)||(2974894-2974945)
chr5 (50-177)||(12406044-12406171)
chr5 (128-177)||(25910987-25911036)
chr5 (53-182)||(36798362-36798492)
chr5 (125-177)||(39574242-39574294)
chr5 (132-184)||(43098024-43098076)
chr5 (50-182)||(19340762-19340891)
chr5 (127-182)||(20512460-20512515)
chr5 (125-180)||(25364084-25364139)
chr5 (302-415)||(19340634-19340745)
chr5 (50-180)||(28446188-28446318)
chr5 (67-177)||(35166493-35166604)
chr5 (133-181)||(20629735-20629783)
chr5 (365-412)||(38755682-38755729)
chr5 (125-183)||(18403249-18403306)
chr5 (127-180)||(40133140-40133193)
chr5 (125-177)||(6464334-6464386)
chr5 (125-177)||(37897976-37898028)
chr5 (125-176)||(34319964-34320014)
chr5 (70-177)||(35877483-35877590)
chr5 (1-32)||(43098167-43098198)
chr5 (296-415)||(7237052-7237171)
chr5 (125-183)||(16132989-16133047)
chr5 (325-363)||(19277032-19277070)
chr5 (73-114)||(31080686-31080727)
chr5 (125-177)||(3333960-3334012)
chr5 (125-177)||(20126441-20126493)
chr5 (125-169)||(26563223-26563267)
chr5 (125-177)||(42585989-42586041)
[»] chr6 (20 HSPs)
chr6 (67-182)||(12766415-12766530)
chr6 (127-183)||(1377467-1377523)
chr6 (127-183)||(1385215-1385271)
chr6 (51-177)||(10727193-10727320)
chr6 (67-177)||(3579598-3579708)
chr6 (66-176)||(26601659-26601769)
chr6 (294-412)||(10383913-10384030)
chr6 (50-177)||(33401238-33401364)
chr6 (132-177)||(238933-238978)
chr6 (132-177)||(28011390-28011435)
chr6 (129-173)||(18030944-18030988)
chr6 (125-176)||(10727453-10727504)
chr6 (125-177)||(6036647-6036699)
chr6 (73-173)||(2853435-2853535)
chr6 (313-356)||(14286510-14286553)
chr6 (296-415)||(1415565-1415684)
chr6 (294-340)||(22730526-22730572)
chr6 (132-177)||(5003092-5003137)
chr6 (127-179)||(7504883-7504935)
chr6 (125-177)||(30349615-30349667)
[»] chr8 (37 HSPs)
chr8 (125-183)||(17070904-17070962)
chr8 (125-183)||(17577310-17577368)
chr8 (65-175)||(22192307-22192417)
chr8 (64-183)||(41487197-41487317)
chr8 (86-174)||(33298556-33298641)
chr8 (132-182)||(45456964-45457014)
chr8 (50-183)||(35213028-35213159)
chr8 (295-415)||(14958070-14958190)
chr8 (125-180)||(27545614-27545669)
chr8 (132-182)||(37263356-37263406)
chr8 (125-183)||(37813159-37813217)
chr8 (122-182)||(521698-521758)
chr8 (68-177)||(6807176-6807284)
chr8 (127-177)||(9762460-9762510)
chr8 (127-181)||(25144201-25144255)
chr8 (125-179)||(25896991-25897045)
chr8 (127-177)||(39889775-39889825)
chr8 (125-170)||(14880593-14880638)
chr8 (125-174)||(16982632-16982681)
chr8 (132-181)||(29657964-29658013)
chr8 (125-182)||(35795590-35795647)
chr8 (130-179)||(37940167-37940215)
chr8 (125-177)||(20853381-20853433)
chr8 (125-177)||(23702126-23702178)
chr8 (125-177)||(28349566-28349618)
chr8 (294-359)||(9293213-9293280)
chr8 (125-183)||(755900-755958)
chr8 (128-177)||(521527-521576)
chr8 (125-182)||(23702393-23702450)
chr8 (125-177)||(4695014-4695066)
chr8 (296-362)||(15292543-15292611)
chr8 (296-362)||(15472912-15472980)
chr8 (129-177)||(18092914-18092962)
chr8 (127-183)||(23475621-23475677)
chr8 (132-176)||(26824098-26824141)
chr8 (54-114)||(29657770-29657830)
chr8 (125-177)||(36688256-36688308)
[»] scaffold0062 (1 HSPs)
scaffold0062 (67-183)||(46073-46190)
[»] scaffold1458 (1 HSPs)
scaffold1458 (125-177)||(1474-1526)
[»] scaffold0025 (2 HSPs)
scaffold0025 (86-177)||(19043-19134)
scaffold0025 (125-177)||(19600-19652)
[»] scaffold0417 (1 HSPs)
scaffold0417 (132-181)||(9603-9652)
[»] scaffold0735 (1 HSPs)
scaffold0735 (125-177)||(6063-6115)
[»] scaffold0515 (1 HSPs)
scaffold0515 (125-177)||(3642-3694)
[»] scaffold0306 (1 HSPs)
scaffold0306 (125-177)||(3642-3694)
[»] scaffold0248 (2 HSPs)
scaffold0248 (125-174)||(669-718)
scaffold0248 (125-177)||(405-457)
[»] scaffold0328 (2 HSPs)
scaffold0328 (128-183)||(9409-9464)
scaffold0328 (127-177)||(9679-9727)
[»] scaffold0067 (1 HSPs)
scaffold0067 (52-114)||(4199-4261)
[»] scaffold0150 (1 HSPs)
scaffold0150 (125-178)||(9557-9610)
[»] scaffold0809 (1 HSPs)
scaffold0809 (50-114)||(2819-2883)
[»] scaffold0372 (1 HSPs)
scaffold0372 (122-182)||(122-182)
[»] scaffold0250 (1 HSPs)
scaffold0250 (129-177)||(3575-3623)
[»] scaffold0137 (1 HSPs)
scaffold0137 (131-167)||(20183-20219)


Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-125; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 140 - 418
Target Start/End: Complemental strand, 30849269 - 30848993
Alignment:
Q  140 caacttcgtgaaagttagggggcgaaaactgctattaaacctttgcaaaacacatggatttcgtgtaaatacttggaccttctcatttcaagtacatgtt 239  Q
    ||||||||| ||| ||| |||| |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30849269 caacttcgtaaaatttaaggggtgaaaactgctattaagtctttgcaaaacacatgaatttcgtgtaaatacttggaccttctcatttcaagtacatgtt 30849170  T
Q  240 atgttagccacatgaattatgtttaattacataaaccaagaaatgattaaacagtttgttagaacaacaaccggtaacaaaagattaataagaaactaaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30849169 atgttagccacatgaattatgtttaattacataaaccaagaaatgattaaacagtttgttagaacaaaaaccggtaacaaaagattaataagaaactaaa 30849070  T
Q  340 ataaaagacaatgaacacacgatcaatttgttaatacagtttagccaatggtgcctacctctgcgattatagagcaact 418  Q
    |||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30849069 ataaaagacaatgaacacactatc--tttgttaaaacagtttagccaatggtgcctacctctgcgattatagagcaact 30848993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 23891790 - 23891663
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||||| |||||||| |||||||| || |||||||||| |||  ||||||||||||||       || |||||||||||||||||||||||||    
T  23891790 accaaaaattgatcttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtg 23891691  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| |||||||||||||||||    
T  23891690 aaagttagggagcgaaaactgctattaa 23891663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 3377695 - 3377822
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   |||| ||| |||||||| || |||||||||| |||| || |||||||||||       |  ||||||||||||||||||||| | |    
T  3377695 accaaaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttggg 3377794  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||| ||||||||||||||    
T  3377795 aaagttagggggctaaaactgctattaa 3377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 39642252 - 39642198
Alignment:
Q  128 gggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  39642252 gggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcctt 39642198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 179
Target Start/End: Complemental strand, 6569657 - 6569528
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| |||||||||| |||||||| || | |||||||||||   |||||||||||||        || |||||| ||||||||||| || ||     
T  6569657 accaaaaattggttttggggggccaaaactgctacaattgcaaaattttaggggcggttttgtaatttttttcttagggggtcaaaatcacaattttgta 6569558  T
Q  150 aaagttagggggcgaaaactgctattaaac 179  Q
    ||| ||||| ||||||||||||||||||||    
T  6569557 aaaattaggaggcgaaaactgctattaaac 6569528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 30849350 - 30849287
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  30849350 accaaaaattgatcttggggg-tcaaaactgctatagttgcaaaatttagaggacggttttgtag 30849287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 7060759 - 7060696
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgta 113  Q
    |||||||||||  ||||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  7060759 accaaaaattggctttggggggtcaaaattgttacagttgcaaaacttagagggcggttttgta 7060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 14979019 - 14979111
Alignment:
Q  85 agttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||||| ||||||||||||||       || ||| |||||||||  ||||||| |||||||||||||||||||||| |||||||    
T  14979019 agttgcaaaatttagggggcggttttgtagtatttttcttaggaggccaaaattgcaacttcatgaaagttagggggcgaaaacttctattaa 14979111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 18632602 - 18632650
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  18632602 ggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 18632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 46912239 - 46912187
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  46912239 ccaaaatcgcaacttcgtgaaagttaaggagcgaaaactgctattaaaccttt 46912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 50401556 - 50401686
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||||  |||||| | |||| ||| || |||||||||| ||||||| |||||||||||       || | || ||||||||| ||||||||      
T  50401556 accaaaaattgaccttggggagccaaa-ctgctacagttgcaaaacttagaggacggttttgtagtttttttcttaaggagccaaaatcgcaacttcgaa 50401654  T
Q  150 aaagttagggggcgaaaactgctattaaacct 181  Q
    ||| ||| ||||||||||||||||||||||||    
T  50401655 aaaattaaggggcgaaaactgctattaaacct 50401686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 23220759 - 23220869
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcg 163  Q
    |||||||  |||||||| || ||||| |||| |||| ||||||||||||||       |  ||||| ||||||||  |||||||| ||||||||||||||    
T  23220759 ttgggggaccaaaactgctacagttgtaaaacttagggggcggttttgtagtttttttcagaggggaccaaaatcgtaacttcgtaaaagttagggggcg 23220858  T
Q  164 aaaactgctat 174  Q
    |||||||||||    
T  23220859 aaaactgctat 23220869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 41997753 - 41997639
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaa 166  Q
    ||||| |||||||| || |||||||||| |||   |||||||||||||       || | |||||||||||| |||||| |||||| ||||||||| |||    
T  41997753 gggggccaaaactgctacagttgcaaaacttatgaggcggttttgtagttgttttcttatggggccaaaatcgcaactttgtgaaaattagggggcaaaa 41997654  T
Q  167 actgctattaaacct 181  Q
    | |||||||||||||    
T  41997653 attgctattaaacct 41997639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 25486479 - 25486523
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaa 25486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 42924383 - 42924331
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| |||||||||||||||||||||||||| |||| |||||| |||||||    
T  42924383 agggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaa 42924331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 3377556 - 3377498
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| |||||| |  ||||||||||||| |||||||||||||| |||||    
T  3377556 agggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagccttt 3377498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 25085452 - 25085402
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||||||| ||||||  ||||||||||||||||||||||||||||||    
T  25085452 ggggtcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaa 25085402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 11050430 - 11050482
Alignment:
Q  130 gccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||    
T  11050430 gccaaaattgcaacttcgtgaaagtta-gggacgaaaactgctattaaaccttt 11050482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 1096711 - 1096767
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||    
T  1096711 ggggctaaaatcgcaatttcgtgaaagttagagagcgaaaactgcaattaaaccttt 1096767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 3814815 - 3814763
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||||||||||| |||||  |||||||| ||| ||||||||||    
T  3814815 agggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaa 3814763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 16874553 - 16874509
Alignment:
Q  135 aatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||    
T  16874553 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaaac 16874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 17692782 - 17692726
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||||| ||||||||||||| | |||||||||||||  |||| |||||||||||||    
T  17692782 agggggctaaaatcacaactttgagaaagttagggggttaaaattgctattaaacct 17692726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 37008272 - 37008220
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| |||||  |||||||| ||||||||||||||    
T  37008272 agggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 37008220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 46880786 - 46880738
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    ||||||| ||||||||| ||| |||||| ||||||||||||||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaaacc 46880738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7060810 - 7060779
Alignment:
Q  1 acgtggcaccctaagtgaggtgccgcgtgtta 32  Q
    ||||||||||||||||||||||||||||||||    
T  7060810 acgtggcaccctaagtgaggtgccgcgtgtta 7060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 17760737 - 17760678
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctttg 184  Q
    |||||||||||||| |||||| | | |||||||||||| ||| |||||||||| ||||||    
T  17760737 agggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagcctttg 17760678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 45739196 - 45739247
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||||||| |||||||||||||||||  || |||||||| ||||||||||    
T  45739196 ggccaaaatcgcaacttcgtgaaagttaaaggacgaaaactactattaaacc 45739247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 46573012 - 46573144
Alignment:
Q  52 caaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtga 150  Q
    ||||||||||| | |||||  |||||||| || |||||||||| |||| |||| || ||||||        || ||||| |||||||| ||||||||| |    
T  46573012 caaaaattgatctcgggggaccaaaactgctacagttgcaaaacttagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaa 46573111  T
Q  151 aagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||| || | |||||||||||||| |||||    
T  46573112 aagttagaggacaaaaactgctattaagccttt 46573144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 12960962 - 12960912
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||||||| |||||||| ||||||||||||| ||||  |||||||||||||    
T  12960962 ttggggggccaaaactgctatagttgcaaaacttaggaggcggttttgtag 12960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 45739061 - 45738939
Alignment:
Q  54 aaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaag 153  Q
    |||||||| ||||||||  ||||||||  |||| ||||||| |||  ||||||||||||||       || |||||| |||||||||||||| | |||||    
T  45739061 aaaattgactttgggggc-caaaactgccatagatgcaaaacttaaggggcggttttgtagttttttccttagggggtcaaaatcacaactttgagaaag 45738963  T
Q  154 ttagggggcgaaaactgctattaa 177  Q
    |||||| |  |||| |||||||||    
T  45738962 ttagggagttaaaattgctattaa 45738939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 25486395 - 25486444
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttag 99  Q
    |||||||||||| ||||||||| |||||||| |||||||| |||| ||||    
T  25486395 accaaaaattgactttggggggccaaaactgctatagttgtaaaacttag 25486444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 51250539 - 51250482
Alignment:
Q  126 gggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||||||| |||||| |  ||||||||||||| ||||||| |||||| |||||    
T  51250539 gggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagccttt 51250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 5287833 - 5287885
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||| ||||  ||||||||||||||    
T  5287833 agggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaa 5287885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 6320840 - 6320891
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| | ||||||| ||||||||||||| ||||||    
T  6320840 agggggccaaaatcgcaacttcttaaaagtta-ggggcgaaaactggtattaa 6320891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 7579717 - 7579661
Alignment:
Q  126 gggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||| ||||||   |||||||| ||||  |||||||||||||||||||    
T  7579717 gggggccaaaatcgcaacttttggaaagttaaggggttaaaactgctattaaacctt 7579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 15659253 - 15659309
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||| ||||||||||||||| |  |||||||||||   ||||||||||||||||||    
T  15659253 aggggaccaaaatcacaactttggaaaagttaggggcttaaaactgctattaaacct 15659309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 4049905 - 4050038
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   |||||||| |||||||| || |||||||||  |||| ||||||||||||||       || |||||||||||||||||||||||||    
T  4049905 accaaaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtg 4050004  T
Q  150 aaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||| |||||||||||||||||||| |||||    
T  4050005 aaagttaaggggcgaaaactgctattaagccttt 4050038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 36580381 - 36580277
Alignment:
Q  73 caaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgct 172  Q
    |||||||| || |||||||||| |||| || |||||||||||       || ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  36580381 caaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaactgct 36580282  T
Q  173 attaa 177  Q
    |||||    
T  36580281 attaa 36580277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 14247387 - 14247291
Alignment:
Q  87 ttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||| |||  ||||||||||||||       || ||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  14247387 ttgcaaaacttatggggcggttttgtagtttttttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaaaactgctattaagccttt 14247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 20185114 - 20185232
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcg 163  Q
    |||||||| |||||||| || |||||||||| ||||  |||||||||||||        | |||||| ||||||| ||||||||||||||||||||||||    
T  20185114 ttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagttttttttt-agggggtcaaaatcgcaacttcgtgaaagttagggggcg 20185212  T
Q  164 aaaactgctattaaaccttt 183  Q
    |||||| ||||||| |||||    
T  20185213 aaaactactattaatccttt 20185232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 17876347 - 17876474
Alignment:
Q  56 aattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagtt 155  Q
    ||||| |||| ||||| |||||||| || |||||||||| |||  || ||||||||||        || | ||||||||||||  |||||||||||||||    
T  17876347 aattggtttttgggggccaaaactgctacagttgcaaaacttaatggacggttttgtaatttttttcttaaggggccaaaatcgtaacttcgtgaaagtt 17876446  T
Q  156 agggggcgaaaactgctattaaaccttt 183  Q
    |||||| ||||||||||||||| |||||    
T  17876447 agggggtgaaaactgctattaagccttt 17876474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 19645062 - 19645116
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  19645062 ggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaattgctattaaacct 19645116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 28350171 - 28350113
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||    
T  28350171 agggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagccttt 28350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 3247380 - 3247482
Alignment:
Q  73 caaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgct 172  Q
    |||||||| || |||||||||||||||  |||||||||||||        | | |||||||||||||||||||||||||||||||||| |||||| || |    
T  3247380 caaaactgctacagttgcaaaatttaggaggcggttttgtagtttttt--ttatggggccaaaatcacaacttcgtgaaagttaggggacgaaaattgtt 3247477  T
Q  173 attaa 177  Q
    |||||    
T  3247478 attaa 3247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 21748082 - 21748125
Alignment:
Q  134 aaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 21748125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 28785811 - 28785760
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctatta 176  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  28785811 agggggccaaaatcgtaacttcgtgaaagttagggggcggaaactgctatta 28785760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 8074136 - 8074186
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  8074136 ggggctaaaatcgtaacttcgtgaaagttagggggcgaaaactgctattaa 8074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 23826283 - 23826333
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  23826283 ggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaa 23826333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 20505153 - 20505097
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||||||||| || |||||| | |||||||||||||| ||||||||||||||||||    
T  20505153 agggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaacct 20505097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 21939333 - 21939385
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||||||| | ||||||||| ||||||||||||||    
T  21939333 agggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaa 21939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 45697542 - 45697490
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  45697542 agggggccaaaatcgcaacttcgagaaagttaggggacgaaaactgttattaa 45697490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 11373900 - 11373850
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  11373900 ggggtcaagatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 11373850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 15348224 - 15348274
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  15348224 caaaatcgcaacttcgtgaaagttagggggtgaatactgctattaagcctt 15348274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 3382085 - 3382137
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||||||| ||||||||||||| ||||||| | |||| |||||    
T  3382085 ccaaaatcacaacttcgtaaaagttagggggcaaaaactgatgttaagccttt 3382137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 6726518 - 6726570
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||| ||||| ||||||||||||||||||||| | ||||| ||||||||    
T  6726518 agggggcctaaatcgcaacttcgtgaaagttaggggacaaaaacagctattaa 6726570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 6792055 - 6792111
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||| |||||||| |||||| |  ||||||||||||| ||||||||||||||||||    
T  6792055 aggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaacct 6792111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 9500161 - 9500213
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||| |||||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  9500161 aggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 18186567 - 18186438
Alignment:
Q  53 aaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag-nnnnnnnctcagggggccaaaatcacaacttcgtgaa 151  Q
    |||||||||| ||| | || |||||||| ||||||||||||| ||||  |||||||||||||        || |   |||||||||| ||||||| | ||    
T  18186567 aaaaattgatcttgagaggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttcttaaaaggccaaaatcgcaacttcataaa 18186468  T
Q  152 agttagggggcgaaaactgctattaaacct 181  Q
    |||||||||||||||||  |||||||||||    
T  18186467 agttagggggcgaaaaccactattaaacct 18186438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 20505268 - 20505320
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| | |||| ||||||| |||||||||||||||    
T  20505268 agggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaa 20505320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 23746155 - 23746207
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    ||||| |||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  23746155 ggggctaaaatcgcaacttcgtaaaagttaggggacgaaagctgctattaaac 23746207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 35250303 - 35250433
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| | |||||||| |||||||| || |||||||||| |||| |||| |||||| ||        | |||||| ||||||| |||||| ||     
T  35250303 accaaaaattggtcttggggggccaaaactgctacagttgcaaaacttagggggcagttttgcagtttttt--ttagggggtcaaaatcgcaactttgtc 35250400  T
Q  150 aaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||| ||||| ||||| ||||||||||||||    
T  35250401 aaagtta-ggggcaaaaaccgctattaaaccttt 35250433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 47909749 - 47909697
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| |||||| |||||| | |||||||||||||| ||||||||||||||    
T  47909749 agggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 47909697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 18504505 - 18504556
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||| ||||||| ||||||||||||| ||||||||| |||||| |||||    
T  18504505 caaaatcgcaacttcatgaaagttaggggacgaaaactgttattaagccttt 18504556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 24433013 - 24432978
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggg 160  Q
    |||||||||||||| |||||||||||||||||||||    
T  24433013 agggggccaaaatcgcaacttcgtgaaagttagggg 24432978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 282860 - 282912
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| |||||  |||| ||| ||||||||||||||    
T  282860 agggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaa 282912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 327437 - 327489
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| |||||  |||||||| | ||||||||||||    
T  327437 agggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaa 327489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 5172707 - 5172771
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||||||||||   |||||||  |||||||| || |||||||||| |||| ||||||||||||||    
T  5172707 accaaaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtag 5172771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 41243903 - 41243955
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| |||||||||  ||||| |||||||||||||  ||||||||||||||||    
T  41243903 agggtgccaaaatcgtaactttgtgaaagttagggaccgaaaactgctattaa 41243955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 48058914 - 48058858
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| ||||||  ||||| ||||||||  |||||||||||||| |||||    
T  48058914 ggggccaaaatctcaacttgttgaaacttagggggttaaaactgctattaatccttt 48058858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 28712663 - 28712777
Alignment:
Q  68 ggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaa 167  Q
    ||||||||||||| || |||||||||| |||| ||||| ||||||||       || |||||||||||||||||||||| | ||||||||||||||||||    
T  28712663 ggggtcaaaactgctacagttgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaa 28712762  T
Q  168 ctgctattaaacctt 182  Q
    |||||||||| ||||    
T  28712763 ctgctattaagcctt 28712777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 3192965 - 3193092
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||||  |||||||| ||||||||||| |||||||||| |||| || |||||||| ||       || |||||| ||||||| ||||||| ||    
T  3192965 accaaaaattgaccttggggggccaaaactgttacagttgcaaaacttaggggtcggttttgaagtttttttcttagggggtcaaaatcgcaacttcttg 3193064  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||| |||||||||||||||    
T  3193065 aaagttagggggtgaaaactgctattaa 3193092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 4474256 - 4474382
Alignment:
Q  53 aaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaa 152  Q
    |||||||| | |||||||| |||||||| || |||||||||| ||||||||||||||||||         | |||||||||||||| ||||||||| |||    
T  4474256 aaaaattggtcttggggggccaaaactgctacagttgcaaaacttagagggcggttttgtaatttttt--ttagggggccaaaatcgcaacttcgtaaaa 4474353  T
Q  153 gttagggggcgaaaactgctattaaacct 181  Q
    |||||| || |||||||||||||||||||    
T  4474354 gttaggaggagaaaactgctattaaacct 4474382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 43747409 - 43747277
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| | |||||||| |||||||| || | |||||||| |||  ||||| ||||||||       || |||||||||||||| |||||||||     
T  43747409 accaaaaattggtcttggggggccaaaactgctacaattgcaaaacttattgggcgattttgtagtttttttcttagggggccaaaatcgcaacttcgta 43747310  T
Q  150 aaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||  || |||||||||||||||||||||    
T  43747309 aaagttataggacgaaaactgctattaaacctt 43747277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 54719121 - 54718991
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||||  |||||||| |||||||| || |||||||||| ||||||| ||||||| |||        | |||||  ||||||| ||||||||||    
T  54719121 accaaaaattgaccttggggggccaaaactgctacagttgcaaaacttagaggacggttttatagttttt---ttaggggttcaaaatcgcaacttcgtg 54719025  T
Q  150 aaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||| || |||||||||||||||| |||||    
T  54719024 aaagttagtggacgaaaactgctattaagccttt 54718991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 17773286 - 17773167
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnc-tcagggggccaaaatcacaacttcgtgaaagttagggggc 162  Q
    |||||||| ||||||||  | |||||||||| |||| ||||||||||||||       | | |||| ||||||||| |||||| ||||||||||||||||    
T  17773286 ttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 17773188  T
Q  163 gaaaactgctattaaaccttt 183  Q
    ||||||||||||||| |||||    
T  17773187 gaaaactgctattaagccttt 17773167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 19074587 - 19074468
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnc-tcagggggccaaaatcacaacttcgtgaaagttagggggc 162  Q
    |||||||| ||||||||  | |||||||||| |||| ||||||||||||||       | | |||| ||||||||| |||||| ||||||||||||||||    
T  19074587 ttggggggccaaaactgccacagttgcaaaacttag-gggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggc 19074489  T
Q  163 gaaaactgctattaaaccttt 183  Q
    ||||||||||||||| |||||    
T  19074488 gaaaactgctattaagccttt 19074468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 38958046 - 38958154
Alignment:
Q  68 ggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaa 167  Q
    ||||||||||||| || |||||||||| |||| ||||||||||||||       || |||||  |||||||  || ||||||||||||||||||||||||    
T  38958046 ggggtcaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt-cttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaaa 38958144  T
Q  168 ctgctattaa 177  Q
    ||||||||||    
T  38958145 ctgctattaa 38958154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 28204608 - 28204483
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   |||||||  |||||||| || ||||| ||||||||| ||||| ||||||||        | |||||| ||||||| ||||||||||    
T  28204608 accaaaaattggccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgtagtttttt--ttagggggtcaaaatcgcaacttcgtg 28204511  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||||||| ||||||||||||||||||||    
T  28204510 aaagttaaggggcgaaaactgctattaa 28204483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 19404503 - 19404401
Alignment:
Q  74 aaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgcta 173  Q
    ||||||| |||||||||||||||||| |||| |||||||||       || || |||| |||||| ||||||||||||||||||||| ||||||||| ||    
T  19404503 aaaactgctatagttgcaaaatttagggggcagttttgtagtttttt-cttagagggctaaaatcgcaacttcgtgaaagttaggggacgaaaactgtta 19404405  T
Q  174 ttaa 177  Q
    ||||    
T  19404404 ttaa 19404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 46226946 - 46226998
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  46226946 agggggtcaaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaa 46226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 14856677 - 14856549
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgt 148  Q
    |||||||||||   |||||||| |||||||  ||||||||||||| |||  ||||| ||||||||        || |||| | ||||||| |||||||||    
T  14856677 accaaaaattggcattggggggccaaaactactatagttgcaaaacttatggggcgattttgtagttttttttcttagggagtcaaaatcgcaacttcgt 14856578  T
Q  149 gaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||| |||||||||||||||||    
T  14856577 gaaagttagggtgcgaaaactgctattaa 14856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 44586045 - 44586100
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||||||||||| |||||| | |||||||||||||| |||||||||||||||||    
T  44586045 agggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaaacc 44586100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 48348304 - 48348258
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  48348304 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 48348258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 53184701 - 53184828
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||  ||||||||| |||||||| |  ||||||||| ||||  ||||  ||||||||       || ||| ||| |||||| |||||||||     
T  53184701 accaaaaattggctttggggggccaaaactgcttcagttgcaaattttaatgggcaattttgtagtttttttcttaggtggcaaaaatcgcaacttcgta 53184800  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| |||||||||||||||||    
T  53184801 aaagttagggagcgaaaactgctattaa 53184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 14340788 - 14340731
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||    
T  14340788 aggggaccaaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaagcctt 14340731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 86823 - 86875
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||| |||||||    
T  86823 agggggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaa 86875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 14349375 - 14349419
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||    
T  14349375 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 14349419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 25902532 - 25902469
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    ||||||||||| | |||||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  25902532 accaaaaattggtcttggggggccaaaactgttacagttgcaaaatttag-gggcagttttgtag 25902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 33329666 - 33329614
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||| ||||||||| |||||||| |||||||||||||||||||    
T  33329666 agggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaa 33329614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 36677579 - 36677527
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  36677579 agggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaa 36677527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 36687661 - 36687609
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  36687661 agggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaa 36687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 44585918 - 44585854
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    ||||||||||| | ||||||||  ||||||| || ||||||||||||||| ||||||||||||||    
T  44585918 accaaaaattggtcttggggggcgaaaactgctacagttgcaaaatttagggggcggttttgtag 44585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 51315743 - 51315795
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||||||||| ||||||||||||||    
T  51315743 agggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 51315795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 35359245 - 35359295
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  35359245 ggggccaaaattacaacttcgtgaaagttagagggtgaaaactactattaa 35359295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 20432245 - 20432188
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||| ||||| || ||||||||| ||||||||||||| |||||||||||||| ||||    
T  20432245 aggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcctt 20432188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 12759556 - 12759500
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| ||| ||| ||||||||||||||| ||||||| |||||| |||||    
T  12759556 ggggccaaaatcgcaatttcttgaaagttagggggcaaaaactgttattaagccttt 12759500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 27178194 - 27178143
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||| || ||||||||| ||||||||||| ||||||||||||||||    
T  27178194 agggggccaaa-tcgcaacttcgtaaaagttaggggacgaaaactgctattaa 27178143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 47189653 - 47189601
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| | |||||||||| |||||||||| ||||||    
T  47189653 agggggccaaaatcgcaacttcataaaagttagggagcgaaaactgttattaa 47189601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 52008433 - 52008554
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| ||||| ||  ||||||||| ||||||||||||| ||| ||||| |||||||||       || | ||| |||||||  ||||||||||    
T  52008433 accaaaaattggttttgagg--tcaaaactgctatagttgcaaaacttacagggcagttttgtagtttttttctta-gggaccaaaattgcaacttcgtg 52008529  T
Q  150 aaagttagggggcgaaaactgctat 174  Q
     |||||||| |||||||||| ||||    
T  52008530 gaagttaggaggcgaaaactactat 52008554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 25843596 - 25843651
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    ||||||| |||||| ||  ||||| |||||||||| ||||||||||||||||||||    
T  25843596 agggggctaaaatcgcacattcgtaaaagttagggcgcgaaaactgctattaaacc 25843651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 38178720 - 38178771
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctttg 184  Q
    |||||| |||||| ||| ||||||||||||||||| |||| |||||||||||    
T  38178720 aaaatcgcaactttgtgtaagttagggggcgaaaattgctgttaaacctttg 38178771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 44433104 - 44433058
Alignment:
Q  130 gccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  44433104 gccaaaatcacaacttcgtgaaagtta-ggggtgaaaattgctattaa 44433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 54464346 - 54464480
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctc--agggggccaaaatcacaacttcg 147  Q
    |||||||| || | |||||||| ||||||||  | |||||||||| |||| || |||||||||||        ||  |||||||||| ||| ||| ||||    
T  54464346 accaaaaagtgctattggggggccaaaactgccagagttgcaaaacttaggggccggttttgtagtttttttttcttagggggccaatatcgcaaattcg 54464445  T
Q  148 tgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| ||| ||||||||||||| |||||    
T  54464446 tgaaagttagggagcg-aaactgctattaagccttt 54464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 15978893 - 15978939
Alignment:
Q  68 ggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||| |||||||| ||||||||||||| |||| ||||||||||||||    
T  15978893 ggggccaaaactgctatagttgcaaaacttagggggcggttttgtag 15978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 33329881 - 33329939
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| |||| | | ||||||| |||||  ||||||||||||||||||||    
T  33329881 agggggccaaaatcgcaacgttgggaaagttggggggttaaaactgctattaaaccttt 33329939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 44436505 - 44436455
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||||||| |||||||| || |||||||||| |||| ||||||||||||||    
T  44436505 ttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 44436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 25902612 - 25902669
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||| ||||||||| |||||| | |||||||||||||| ||||||| |||||| ||||    
T  25902612 agggagccaaaatcgcaactttgagaaagttagggggctaaaactgatattaagcctt 25902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 8024902 - 8024842
Alignment:
Q  53 aaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgta 113  Q
    ||||||||  ||||||||| |||||||| || ||||||||||  ||| |||||||||||||    
T  8024902 aaaaattggctttggggggccaaaactgctacagttgcaaaacgtagggggcggttttgta 8024842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 14856814 - 14856870
Alignment:
Q  126 gggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||| || ||| | |||||||||||||  | |||||||||||||||||    
T  14856814 gggggccaaaatcgcatctttgggaaagttagggggttataactgctattaaacctt 14856870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 14992882 - 14992934
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||||||||||||||   |||||||||| ||| ||||||| ||||||||||    
T  14992882 ggccaaaatcacaactttaggaaagttaggcggctaaaactgttattaaacct 14992934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 28944228 - 28944276
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| |||||| || ||||||||||| | ||||||||||||||    
T  28944228 ggccaaaatcgcaacttagtaaaagttaggggacaaaaactgctattaa 28944276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 51315610 - 51315562
Alignment:
Q  65 tggggggtcaaaactgttatagttgcaaaatttagagggcggttttgta 113  Q
    ||||||| |||||||| || |||||||||| |||| |||||||||||||    
T  51315610 tggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 51315562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 34679289 - 34679401
Alignment:
Q  63 tttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggc 162  Q
    ||||||||| |||||||| || |||||||||| |||| ||||||||||||||        | ||||||||||||||||||||||||||||||||||||||    
T  34679289 tttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt--ttagggggccaaaatcacaacttcgtgaaagttagggggc 34679386  T
Q  163 gaaaactgctattaa 177  Q
     ||||||||||||||    
T  34679387 aaaaactgctattaa 34679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 6510197 - 6510312
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcg 163  Q
    |||||||| |||||||| || |||||||||| |||| ||||||||||||||       || |||| ||||||||| ||||||| |||||||||| |||||    
T  6510197 ttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaacttcatgaaagttagagggcg 6510296  T
Q  164 aaaactgctattaaac 179  Q
    ||||||||||||||||    
T  6510297 aaaactgctattaaac 6510312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 37431735 - 37431853
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcg 163  Q
    |||||||| ||||| || || |||||||||| |||  ||||||||||||||       || ||| |||||||||| |||||||||| |||||||||||||    
T  37431735 ttggggggccaaaaatgctacagttgcaaaacttaaggggcggttttgtagtttttttcttaggaggccaaaatcgcaacttcgtggaagttagggggcg 37431834  T
Q  164 aaaactgctattaaacctt 182  Q
    |||||||||||||||||||    
T  37431835 aaaactgctattaaacctt 37431853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 15023022 - 15023149
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| | |||||||| ||||| || || |||| ||||| |||| || |||||||||||       || |||||| ||||||||||||||| ||    
T  15023022 accaaaaattggtcttggggggccaaaattgctacagttacaaaacttaggggacggttttgtagtttttttcttagggggtcaaaatcacaacttcttg 15023121  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||| ||||||||||||||    
T  15023122 aaagttagggggccaaaactgctattaa 15023149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 14489471 - 14489521
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14489471 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 14489521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 418
Target Start/End: Original strand, 15358803 - 15358923
Alignment:
Q  296 tgttagaacaacaaccggtaacaaaagattaataagaaactaaaataaaagacaatgaacacacgatcaatttgttaatacagtttagccaatggtgcct 395  Q
    |||||||||||||||   ||| ||||||||||||| ||||||| | ||||| ||||||||||| ||||  ||||||||  ||||||  | |||| |||||    
T  15358803 tgttagaacaacaactaataataaaagattaataaaaaactaagacaaaaggcaatgaacacaagatc--tttgttaacgcagtttgactaatgatgcct 15358900  T
Q  396 acctctgcgattatagagcaact 418  Q
    |||||||||| |||||| |||||    
T  15358901 acctctgcgactatagaacaact 15358923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 21358364 - 21358421
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||    
T  21358364 agggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcctt 21358421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 16043284 - 16043336
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  16043284 agggggccaaaatcgtaacttcgtgaaagttagggggcgaaaactgctgttaa 16043336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 34761127 - 34761175
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  34761127 aaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaaacct 34761175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 2609129 - 2609075
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||    
T  2609129 ggccaaaatcaaaacttcgtaaaagttagggggcgaaaactactattaaatcttt 2609075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 19206271 - 19206145
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   |||||||| |||||||| || ||||| |||| |||| ||| ||||||||||        | |||||||||||||| |||||| |||    
T  19206271 accaaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagttttttttt-agggggccaaaatcgcaactttgtg 19206173  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||| |||||||||||||| |||||||||    
T  19206172 aaaattagggggcgaaaattgctattaa 19206145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 32969784 - 32969838
Alignment:
Q  123 tcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  32969784 tcagggggctaaaatcgaaactccgtgaaagttagggggcgaaaactgctattaa 32969838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 35718857 - 35718971
Alignment:
Q  68 ggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaa 167  Q
    |||| |||||||| || |||||||||| |||| || |||||||||||       || ||| |  ||| ||| ||||||||||||||||||| |||| |||    
T  35718857 ggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggagatcaagatcgcaacttcgtgaaagttaggaggcggaaa 35718956  T
Q  168 ctgctattaaacctt 182  Q
    |||||||||||||||    
T  35718957 ctgctattaaacctt 35718971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 18709298 - 18709250
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  18709298 ggccaaaatcgaaacttcgtgaaagttaggggacgaaaactgctattaa 18709250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 5362228 - 5362178
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||| |||||| ||||||||||||||||||||| | |||||||    
T  5362228 ggggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaa 5362178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 6592918 - 6593035
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||  ||||||||  |||||||| || |||||||||| |||| |||| |||||||||        | ||||||| |||||| ||||||||||    
T  6592918 accaaaaattggctttgggggc-caaaactgctacagttgcaaaacttagggggcagttttgtagttttttt-taagggggctaaaatcgcaacttcgtg 6593015  T
Q  150 aaagttagggggcgaaaact 169  Q
    ||||||||| ||||||||||    
T  6593016 aaagttaggtggcgaaaact 6593035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 20650425 - 20650376
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctat 174  Q
    |||||||||||||| ||||||| ||||| ||||||||| |||||||||||    
T  20650425 agggggccaaaatctcaacttcttgaaacttagggggctaaaactgctat 20650376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 43029053 - 43029109
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||||||||| |||||| ||||||||||  |||| |||||||||||||||||||    
T  43029053 agggggccaaaatcgcaactttgtgaaagtta-agggcaaaaactgctattaaacctt 43029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14489267 - 14489211
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||||||||   ||||||||| |||| |||||||||||||| |||||    
T  14489267 ggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagccttt 14489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 14816056 - 14816108
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| |||||  |||||||| ||||||||||||||    
T  14816056 agggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 14816108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 14943666 - 14943549
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagg-gcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgt 148  Q
    ||||||| ||| | |||| ||||||||| || || |||||||||| |||| || ||||||||||||       || |||| | |||||||||||||||||    
T  14943666 accaaaatttggtcttggtgggtcaaaattgctacagttgcaaaacttaggggtgcggttttgtagtttttt-cttagggtgtcaaaatcacaacttcgt 14943568  T
Q  149 gaaagttagggggcgaaaa 167  Q
    |||||||||||||| ||||    
T  14943567 gaaagttagggggcaaaaa 14943549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 36177036 - 36176984
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| |||||| ||||||||||||| |||| |||| ||||||||||||||    
T  36177036 agggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaa 36176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 39918489 - 39918437
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||||||||| |||||| |||||||    
T  39918489 agggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaa 39918437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 4576598 - 4576544
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    ||||||||||||| ||||||| |  ||||||||| ||| ||||||||||||||||    
T  4576598 agggggccaaaatgacaactttgaaaaagttaggaggctaaaactgctattaaac 4576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 5470377 - 5470331
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    |||||| ||||||||||||| | ||||| ||||||||||||||||||    
T  5470377 aaaatcgcaacttcgtgaaaataaggggacgaaaactgctattaaac 5470331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 19399440 - 19399486
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  19399440 ccaaaatcacaactttgaaaaagttagggggctaaaactgctattaa 19399486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 31827800 - 31827842
Alignment:
Q  135 aatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||||||||| |||||||||||||||||| |||||||||    
T  31827800 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 31827842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 43028849 - 43028791
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| |||||| |   |||||||||||| |||||||||||||| |||||    
T  43028849 agggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagccttt 43028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 25435 - 25378
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||||  ||||| | |||||||||||||| ||||||| |||||| ||||    
T  25435 agggggccaaaatcgtaactttgggaaagttagggggcaaaaactgttattaagcctt 25378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 5470594 - 5470643
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctat 174  Q
    |||||||||||||| ||||||   |||||||||||||| |||||||||||    
T  5470594 agggggccaaaatcgcaactttaggaaagttagggggctaaaactgctat 5470643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 12948937 - 12948888
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||||| ||||||| | ||| ||||||||| ||||||||||||||||||    
T  12948937 caaaatcgcaacttcttaaaatttagggggctaaaactgctattaaacct 12948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 34679148 - 34679095
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||||| |||||| |  ||||||||||||| |||||||||||||| ||||    
T  34679148 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcctt 34679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 37803398 - 37803443
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| ||||||||| |||||||||||||||||| || ||||||    
T  37803398 caaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaa 37803443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 4925706 - 4925754
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| ||||||||||||||||||||| | |||| | |||||||    
T  4925706 ggccaaaatcgcaacttcgtgaaagttaggggacaaaaattactattaa 4925754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 6592779 - 6592727
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||| |||||| |  ||||||||||||| ||||||||||||||    
T  6592779 agggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6592727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 14943808 - 14943860
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||||||||| |  ||||||| ||||| |||||||||||||| |||||    
T  14943808 ccaaaatcacaactttggaaaagttaaggggctaaaactgctattaagccttt 14943860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 19895668 - 19895616
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||| |||||||| ||| ||||| ||||||||||| ||||||||| ||||||    
T  19895668 aggggaccaaaatcgcaatttcgtaaaagttaggggacgaaaactgatattaa 19895616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 21631873 - 21631817
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||||||||||| ||||||| |||||  |||||||| |||| ||| |||||||||    
T  21631873 agggggccaaaatcgcaacttcatgaaacatagggggccaaaagtgcaattaaacct 21631817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 31395142 - 31395223
Alignment:
Q  296 tgttagaacaacaaccggtaacaaaagattaataagaaa-ctaaaataaaagacaatgaacacacgatcaatttgttaatacag 378  Q
    ||||||| |||||||  ||||||||| || ||||||||| | ||| |||||||||||||||||| |||  ||||||||| ||||    
T  31395142 tgttagagcaacaactagtaacaaaatataaataagaaaacgaaagtaaaagacaatgaacacatgat--atttgttaacacag 31395223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 36177351 - 36177407
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| ||||||| ||||| ||| ||||| ||||||| |||||| |||||    
T  36177351 ggggccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaagccttt 36177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 36715432 - 36715388
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaa 94  Q
    ||||||||||||||||| ||||||||||||| || | ||||||||    
T  36715432 accaaaaattgattttgaggggtcaaaactgctacaattgcaaaa 36715388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 39918625 - 39918689
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||||||||||   |||||||| ||||| || || |||||||||| |||| ||||||||||||||    
T  39918625 accaaaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgtag 39918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 64 - 179
Target Start/End: Complemental strand, 14449390 - 14449274
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtgaaagttagggggc 162  Q
    |||||||| |||||||| ||||||||||||| ||| ||| | |||||||||        || |||||||||||||| |||||||||||||||||||||||    
T  14449390 ttggggggccaaaactggtatagttgcaaaacttaaaggacagttttgtagttgtttttcttagggggccaaaatctcaacttcgtgaaagttagggggc 14449291  T
Q  163 gaaaactgctattaaac 179  Q
    |||||||||||||||||    
T  14449290 gaaaactgctattaaac 14449274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 35383820 - 35383763
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35383820 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcctt 35383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 53924876 - 53924750
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||||| |||||||  |||||||| || |||||||||| |||| || ||||||||||        || | |||| ||||||||||||||||||    
T  53924876 accaaaaattgatcttgggggc-caaaactgctacagttgcaaaacttaggggacggttttgtaatttttttcttaaggggtcaaaatcacaacttcgtg 53924778  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||||| |||| |||||||    
T  53924777 aaagttagggggcgagaactactattaa 53924750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 43074669 - 43074613
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  43074669 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagccttt 43074613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 23759674 - 23759558
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaa 166  Q
    ||||| |||||||  || ||||||||||||||| || |||||||||||       || | |||||||||||| ||||||  |||||||||||||||||||    
T  23759674 gggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagttagggggcgaaa 23759575  T
Q  167 actgctattaaaccttt 183  Q
    ||| ||||||| |||||    
T  23759574 actactattaagccttt 23759558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 50769620 - 50769672
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  50769620 agggggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgcttttaa 50769672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 1420642 - 1420538
Alignment:
Q  73 caaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgct 172  Q
    |||||||| ||||||||||||| |||| ||||||||||||||        | ||| |||||||||| |||||| |  ||||||||||||| |||||||||    
T  1420642 caaaactgatatagttgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaactgct 1420543  T
Q  173 attaa 177  Q
    |||||    
T  1420542 attaa 1420538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 10059814 - 10059679
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag--nnnnnnnctcagggggccaaaatcacaacttcg 147  Q
    ||||||||||||  |||||||  |||||||| || |||||||||| |||| ||||||||||||||         || ||||||||||||||| || |||     
T  10059814 accaaaaattgaccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttttttcttagggggccaaaatcataatttca 10059715  T
Q  148 tgaaagttagggggcgaaaactgctattaaaccttt 183  Q
     |||| ||| |||||||||||| |||||||||||||    
T  10059714 agaaaattaaggggcgaaaactactattaaaccttt 10059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 35393852 - 35393980
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgt 148  Q
    |||||||||||   |||||||| |||||||| || |||| |||||  ||| ||||||||||||||        || || || |||||||| |||||||||    
T  35393852 accaaaaattggccttggggggccaaaactgctacagttacaaaacctagggggcggttttgtagttttttttcttagaggtccaaaatcgcaacttcgt 35393951  T
Q  149 gaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||| |||||||||||||||    
T  35393952 gaaagttagggggtgaaaactgctattaa 35393980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 4411493 - 4411543
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||||||||    
T  4411493 aaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaaaccttt 4411543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 8965577 - 8965523
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||    
T  8965577 agggggctaaaatcacaacttcgtaaaagtaagggggcgaaaacttctattaaac 8965523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 2181325 - 2181435
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaa 166  Q
    ||||| ||||||||||| |||||||||| ||||||||| |||||||||       || | || ||||||||| ||||||| | |||||||||| || |||    
T  2181325 gggggccaaaactgttacagttgcaaaacttagagggcagttttgtagttcttttcttaaggagccaaaatcgcaacttcataaaagttagggagcaaaa 2181424  T
Q  167 actgctattaa 177  Q
    | |||||||||    
T  2181425 agtgctattaa 2181435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 51362806 - 51362855
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  51362806 caaaatcacaactttgtaaaagttaggggacgaaaactgctattaaacct 51362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 2654008 - 2653956
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  2654008 agggggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaa 2653956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 16292534 - 16292582
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||| |||||||||||||||||||||||||||| || ||||||||||    
T  16292534 aaaatcgcaacttcgtgaaagttagggggcgaaaattgttattaaacct 16292582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 37831647 - 37831592
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||||||||||| ||||||| | ||| ||||||||| |||||||||||||||||    
T  37831647 agggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaaacc 37831592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 51371728 - 51371779
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||| ||||    
T  51371728 ccaaaatcgcaacttcgagaaagttagggggcgaaaactactattaagcctt 51371779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 53312551 - 53312602
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||| |||||    
T  53312551 caaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagccttt 53312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 6207225 - 6207179
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||    
T  6207225 ccaaaatcacaacttcgctaaagttagggagcgaaaactgctattaa 6207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 27978958 - 27979007
Alignment:
Q  128 gggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||| ||||||||| |||||||||||||||||| || ||||||    
T  27978958 gggccaaaatcgcaacttcgttaaagttagggggcgaaaaatgttattaa 27979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 14060869 - 14060760
Alignment:
Q  66 ggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaa 165  Q
    |||||| |||||||| ||||||||||||  |||| ||||||||||||||       || |||||| ||||||| |||||| |  ||||||||||||  ||    
T  14060869 ggggggccaaaactgctatagttgcaaagcttagggggcggttttgtag-ttttttcttagggggtcaaaatcgcaactttgaaaaagttagggggttaa 14060771  T
Q  166 aactgctatta 176  Q
    |||||||||||    
T  14060770 aactgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19909226 - 19909170
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| |||||| | |||||||||||||  |||||||||||||| |||||    
T  19909226 ggggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagccttt 19909170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 25909542 - 25909490
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||||||||||| |  ||||||||||||  ||||||||||||||    
T  25909542 agggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaa 25909490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 49185818 - 49185869
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| ||||||||| ||||| |||||||||||||||    
T  49185818 agggggccaaaatcgcaactttgtgaaagtt-gggggtgaaaactgctattaa 49185869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 6614897 - 6614850
Alignment:
Q  130 gccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||| ||||||||||||||||| ||| |||||| |||||||||    
T  6614897 gccaaaatcgcaacttcgtgaaagttaagggtcgaaaaatgctattaa 6614850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 11824462 - 11824509
Alignment:
Q  130 gccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||| ||||||||| |||||||||||||| |||||| ||||||    
T  11824462 gccaaaatcgcaacttcgtaaaagttagggggcggaaactgttattaa 11824509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 29697786 - 29697837
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||| ||||    
T  29697786 ccaaaatcgcaacttcatgaaagttaggaggtgaaaactgctattaagcctt 29697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 50769418 - 50769363
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||| ||||||| |||||| | |||||||||||||  |||||||||||||||||    
T  50769418 aggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaaacc 50769363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 52462909 - 52462846
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgta 113  Q
    |||||||||||| |||| | |||||||||||  | |||||||||| ||| ||||||||||||||    
T  52462909 accaaaaattgactttgagaggtcaaaactgaaacagttgcaaaacttaaagggcggttttgta 52462846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 3369902 - 3369844
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| ||||||| ||| | ||||||||| ||||||| |||||| |||||    
T  3369902 agggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagccttt 3369844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 3658190 - 3658240
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||| ||||||| | |||||||| || |||||||||||||||||||||    
T  3658190 caaaatcgcaacttcataaaagttagaggacgaaaactgctattaaacctt 3658240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 6207437 - 6207487
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||||||||   |||| ||||||||| ||||||||||||||    
T  6207437 ggggccaaaatcacaactttaggaaaattagggggctaaaactgctattaa 6207487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 12719705 - 12719763
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||  |||||| | |||||||||||||  |||||||||||||| |||||    
T  12719705 agggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagccttt 12719763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 35615433 - 35615478
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||    
T  35615433 ccaaaatcgcaacttcgtgaaagtta-ggggtgaaaactgctattaa 35615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 51362591 - 51362533
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| ||||||    ||||||||||||| |||||| |||||||||||||    
T  51362591 agggggccaaaatcgcaactttagaaaagttagggggctaaaactactattaaaccttt 51362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 12719506 - 12719449
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||||  || ||  ||||| ||| |||||||||||||||||||||||||    
T  12719506 agggggccaaaatcgtaaatttatgaaaattaaggggcgaaaactgctattaaacctt 12719449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 1571669 - 1571717
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| |||||||||||||||||||  | |||||||| ||||||    
T  1571669 ggccaaaatcgcaacttcgtgaaagttaggacgtgaaaactgttattaa 1571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 2837160 - 2837204
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaact 169  Q
    |||||||||||||  ||||||| ||||||||| ||||||||||||    
T  2837160 agggggccaaaattgcaacttcttgaaagttaaggggcgaaaact 2837204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 14016771 - 14016723
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| |||||| | |||||||||||||| ||||| ||||||||    
T  14016771 ggccaaaatcgcaactttgggaaagttagggggctaaaaccgctattaa 14016723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 21451517 - 21451457
Alignment:
Q  122 ctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||| || |||||| |||||| | |||||||||| ||| |||||||||||||| ||||    
T  21451517 ctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcctt 21451457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 21871443 - 21871407
Alignment:
Q  140 caacttcgtgaaagttagggggcgaaaactgctatta 176  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  21871443 caacttcgtgaaagttaggaggcgaaaaccgctatta 21871407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 21927304 - 21927268
Alignment:
Q  140 caacttcgtgaaagttagggggcgaaaactgctatta 176  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  21927304 caacttcgtgaaagttaggaggcgaaaaccgctatta 21927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 21957730 - 21957778
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| |||||| |  ||||||||||||| ||||||||||||||    
T  21957730 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 21957778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 35615369 - 35615317
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||    ||||||||||||| ||||||||||||||    
T  35615369 agggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaa 35615317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 41148559 - 41148611
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||| |||||||||||||||| | |||  |||||||| ||||||||||||||    
T  41148559 aggggaccaaaatcacaacttcttaaaatatagggggccaaaactgctattaa 41148611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 47742286 - 47742230
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||||||||||| ||||||| |||||  |||| ||  ||||||||||||||||||    
T  47742286 agggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctattaaacct 47742230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 49185625 - 49185574
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||||||||  ||||||||||||||    
T  49185625 agggggccaaaatcgcaacttgg-gaaagttagggggttaaaactgctattaa 49185574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 53312341 - 53312289
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| |  ||||||||||||| |||| |||||||||    
T  53312341 agggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaa 53312289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 54983902 - 54983851
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||| || || |||||| ||||||||||| ||||||||||||||||    
T  54983902 agggggccaaa-tcgcatcttcgtaaaagttaggggacgaaaactgctattaa 54983851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 32391849 - 32391722
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   |||||||| |||||||| || |||||||||| |||| ||| | ||||||||       || | |||||||||||||||||||||||    
T  32391849 accaaaaattggccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtttttttcttaaggggccaaaatcacaacttcgtg 32391750  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||||||| ||||||||||||||||||||    
T  32391749 aaagttaaggggcgaaaactgctattaa 32391722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 3999216 - 3999083
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   ||| |||| |||||||| || |||||||||| ||| | | || ||||||||       || |||||| ||||||| ||||||||||    
T  3999216 accaaaaattggccttgaggggccaaaactgctacagttgcaaaacttataagtcgattttgtagtttttttcttagggggtcaaaatcgcaacttcgtg 3999117  T
Q  150 aaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||||||||||||||||||||||||||||    
T  3999116 aaagttagggggcgaaaactgctattaaaccttt 3999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 3333822 - 3333694
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    |||||||||||   |||||||| |||||||| || | |||||||| ||||||| |||||||||||       || |||||  ||||||| ||||||| ||    
T  3333822 accaaaaattggccttggggggccaaaactgctacatttgcaaaacttagaggacggttttgtagtttttttcttaggggatcaaaatcgcaacttcatg 3333723  T
Q  150 aaagttagggggcgaaaactgctattaaa 178  Q
    |||||||||||||||||||||||||||||    
T  3333722 aaagttagggggcgaaaactgctattaaa 3333694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 2974894 - 2974945
Alignment:
Q  126 gggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2974894 gggggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaa 2974945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 12406171 - 12406044
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgt 148  Q
    |||||||||||   |||||||| ||||||||| | |||||||||| |||| ||||||||||||||        || |||||||||||||| |||||| |     
T  12406171 accaaaaattggccttggggggccaaaactgt-acagttgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgg 12406073  T
Q  149 gaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||||||||||    
T  12406072 gaaagttagggggctaaaactgctattaa 12406044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 25910987 - 25911036
Alignment:
Q  128 gggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  25910987 gggctaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 25911036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 36798362 - 36798492
Alignment:
Q  53 aaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtgaa 151  Q
    ||||||||  ||||||||| |||||||| || |||||||||| |||| ||||||||||| ||        || ||||| |||||||| |||||| | |||    
T  36798362 aaaaattggctttggggggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaa 36798461  T
Q  152 agttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||| |||||||||||||| ||||    
T  36798462 agttagggggctaaaactgctattaagcctt 36798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 39574294 - 39574242
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  39574294 agggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 39574242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 43098076 - 43098024
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctttg 184  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  43098076 caaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaaacctttg 43098024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 19340891 - 19340762
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||||| |||||||| |||||||| || |||||||||| |||| ||||| |||||||         | |||||| ||||||| ||| || |      
T  19340891 accaaaaattgatcttggggggccaaaactgctacagttgcaaaacttagggggcgattttgta---atttttttagggggtcaaaatcgcaattttgga 19340795  T
Q  150 aaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||| |||||||||||||||||||    
T  19340794 aaagttagggggctaaaactgctattaaacctt 19340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 20512460 - 20512515
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||    
T  20512460 ggggccaaaatcgcaacttcgtgaaagttaagaggcgaaaactgctattaagcctt 20512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 25364084 - 25364139
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  25364084 agggggccaaaattgcaacttcgtgaaagttagagggtgaaaactgctattaaacc 25364139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 415
Target Start/End: Complemental strand, 19340745 - 19340634
Alignment:
Q  302 aacaacaaccggtaacaaaagattaataagaaactaaaataaaagacaatgaacacacgatcaatttgttaatacagtttagccaatggtgcctacctct 401  Q
    |||||||||  ||||||  ||||||||||||||  |||||||||| |||||||||  | ||  |||| ||||| |||||| | ||||||||| |||||||    
T  19340745 aacaacaactagtaacagtagattaataagaaatgaaaataaaaggcaatgaacattccat--atttattaatgcagtttggtcaatggtgcttacctct 19340648  T
Q  402 gcgattatagagca 415  Q
    |||| |||||||||    
T  19340647 gcgactatagagca 19340634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 28446188 - 28446318
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgt 148  Q
    ||||||||||||| |||||||  |||||||| || |||||||||| |||| || |||||||||||        || ||||| |||||||||||| |||||    
T  28446188 accaaaaattgatcttgggggc-caaaactgctacagttgcaaaacttaggggacggttttgtagtttttattcttaggggaccaaaatcacaatttcgt 28446286  T
Q  149 gaaagttagggggcgaaaactgctattaaacc 180  Q
     ||| ||||||| ||||||||| |||||||||    
T  28446287 aaaaattaggggacgaaaactgttattaaacc 28446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 35166493 - 35166604
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagtta-gggggcgaa 165  Q
    ||||| |||||||| || || ||||||| |||| ||| | ||||||||       || ||||| |||||||| ||||||||||||||||| |||||||||    
T  35166493 gggggccaaaactgctacagctgcaaaacttagggggtgattttgtagtttttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcgaa 35166592  T
Q  166 aactgctattaa 177  Q
    ||||||||||||    
T  35166593 aactgctattaa 35166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 20629783 - 20629735
Alignment:
Q  133 aaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  20629783 aaaatcgcaactttgtgaaagttaaggggcgaaaactgctattaaacct 20629735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 38755729 - 38755682
Alignment:
Q  365 atttgttaatacagtttagccaatggtgcctacctctgcgattataga 412  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||    
T  38755729 atttgttaatacagtttggtcaattgtgcctacctctgcgattataga 38755682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 18403249 - 18403306
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| ||||| | ||||||||||| |||||||||||||||||| |||||    
T  18403249 agggggccaaaatcgcaact-catgaaagttaggtggcgaaaactgctattaagccttt 18403306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 40133140 - 40133193
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||||||||| |||||| | |||||||||||||| |||| ||||||||||||    
T  40133140 ggggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaaacc 40133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 6464334 - 6464386
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| ||||||| |||||  |||||||| ||||||||||||||    
T  6464334 agggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 6464386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 37897976 - 37898028
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| |  ||||||||||||| ||||||||||||||    
T  37897976 agggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 37898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 34320014 - 34319964
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctatta 176  Q
    |||||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  34320014 agggggccaaaatcgcaacttcaagaaagtta-ggggcgaaaactgctatta 34319964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 35877483 - 35877590
Alignment:
Q  70 ggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaac 168  Q
    ||||||||| |||| |||||||||| |||| ||||||||||||||        || ||||| | |||||  |||| ||||||||||||||||| ||||||    
T  35877483 ggtcaaaaccgttacagttgcaaaacttagggggcggttttgtagttttttttcttaggggtc-aaaattgcaacctcgtgaaagttagggggtgaaaac 35877581  T
Q  169 tgctattaa 177  Q
    |||||||||    
T  35877582 tgctattaa 35877590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43098198 - 43098167
Alignment:
Q  1 acgtggcaccctaagtgaggtgccgcgtgtta 32  Q
    ||||||||||||||||||||||||||||||||    
T  43098198 acgtggcaccctaagtgaggtgccgcgtgtta 43098167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 415
Target Start/End: Original strand, 7237052 - 7237171
Alignment:
Q  296 tgttagaacaacaaccggtaacaaaagattaa-taaga-aactaaaataaaagacaatgaacacacgatcaatttgttaatacagtttagccaatggtgc 393  Q
    ||||||||||  |||| ||||||||||||||| ||||| ||| |||  |||||||||||||||||||||  ||||||||   |||||  ||||||  ||     
T  7237052 tgttagaacagtaaccagtaacaaaagattaaataagagaacgaaagaaaaagacaatgaacacacgat--atttgttaccgcagttcggccaattttgt 7237149  T
Q  394 ctacctctgcgattatagagca 415  Q
    |||||||||||  |||||||||    
T  7237150 ctacctctgcggctatagagca 7237171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 16132989 - 16133047
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||| |||||| |||||||||||||||| || |||||||||  ||||||| |||||    
T  16132989 agggggctaaaatcgcaacttcgtgaaagttgggaggcgaaaaccactattaagccttt 16133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 19277070 - 19277032
Alignment:
Q  325 taataagaaactaaaataaaagacaatgaacacacgatc 363  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  19277070 taataagaaacgaaaataaaaaacaatgaacacacgatc 19277032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 31080686 - 31080727
Alignment:
Q  73 caaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  31080686 caaaactgctacagttgcaaaacttagagggcggttttgtag 31080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 3333960 - 3334012
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| |  ||||||||||||| |||||| |||||||    
T  3333960 agggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaa 3334012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 20126493 - 20126441
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||||||||||| |||||  |||||||| |||||| |||||||    
T  20126493 agggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaa 20126441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 26563223 - 26563267
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaact 169  Q
    ||||||||||||||| || |||||||||||||| |||| ||||||    
T  26563223 agggggccaaaatcaaaatttcgtgaaagttagagggcaaaaact 26563267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 42586041 - 42585989
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||| ||||||| |||||  |||||||| ||||||||||||||    
T  42586041 agggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 42585989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 12766415 - 12766530
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaa 166  Q
    ||||| |||||||| || |||||||||| |||  ||||||||||||||        | |||||||||||||| |||||||||||||||||||||| ||||    
T  12766415 gggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaagttagggggtgaaa 12766514  T
Q  167 actgctattaaacctt 182  Q
    ||||||||||| ||||    
T  12766515 actgctattaagcctt 12766530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 1377467 - 1377523
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  1377467 ggggccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaaccttt 1377523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 1385215 - 1385271
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  1385215 ggggccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaaccttt 1385271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 10727320 - 10727193
Alignment:
Q  51 ccaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||   |||||||| |||||||| || |||||||||| ||||||||| |||||||||        || ||| | |||||||||||||||||      
T  10727320 ccaaaaattggccttggggggccaaaactgctacagttgcaaaacttagagggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgct 10727221  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    ||||||||| ||||||||||||||||||    
T  10727220 aaagttaggaggcgaaaactgctattaa 10727193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 3579708 - 3579598
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaa 166  Q
    ||||| ||||| || || |||||||||| |||| ||||||||||||||        | | |||||||||||| ||||||||||||||||| ||| |||||    
T  3579708 gggggccaaaagtgctacagttgcaaaacttagggggcggttttgtagttttttttttacggggccaaaatcgcaacttcgtgaaagttaagggacgaaa 3579609  T
Q  167 actgctattaa 177  Q
    |||||||||||    
T  3579608 actgctattaa 3579598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 26601659 - 26601769
Alignment:
Q  66 ggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaa 165  Q
    ||||| ||||||||| || ||||||||||||||| |||||||||| |||       || | |||||  ||||| ||||||||||||||||||| ||| ||    
T  26601659 gggggatcaaaactgctacagttgcaaaatttagggggcggttttatagtttttttcttaaggggcagaaatcgcaacttcgtgaaagttaggaggcaaa 26601758  T
Q  166 aactgctatta 176  Q
    |||||||||||    
T  26601759 aactgctatta 26601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 10383913 - 10384030
Alignment:
Q  294 tttgttagaacaacaaccggtaacaaaagattaataagaaactaaaataaaagacaatgaacacacgatcaatttgttaataca-gtttagccaatggtg 392  Q
    |||| ||||||||||||  |||||| |||||||||   |||| ||| |||||||||||||||||| ||||  |||||||| ||| |||  ||||||| ||    
T  10383913 tttggtagaacaacaactagtaacagaagattaattttaaacaaaagtaaaagacaatgaacacatgatc--tttgttaacacatgttcggccaatgatg 10384010  T
Q  393 cctacctctgcgattataga 412  Q
    | ||||||||||||||||||    
T  10384011 cttacctctgcgattataga 10384030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 33401238 - 33401364
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| | |||||||| |||||||| || |||||||||| |||| || | |||||||||        | |||| |||||||||  ||||||||     
T  33401238 accaaaaattggtcttggggggccaaaactgctacagttgcaaaacttaggggacagttttgtagttttttttt-agggagccaaaatcgtaacttcgta 33401336  T
Q  150 aaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||| |||||||||||||||    
T  33401337 aaagttagggggtgaaaactgctattaa 33401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 238978 - 238933
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  238978 caaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaa 238933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 28011390 - 28011435
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  28011390 caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaa 28011435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 18030988 - 18030944
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgcta 173  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  18030988 ggccaaaatcgcaacttcgtgaaagttagggggagaaaactgcta 18030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 10727453 - 10727504
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctatta 176  Q
    ||||||||||||||||||||| |  ||||||||||||| |||||||||||||    
T  10727453 agggggccaaaatcacaactttggaaaagttagggggctaaaactgctatta 10727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 6036699 - 6036647
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||| |||||||||| ||||| | |||||||||||||||||||    
T  6036699 agggggtcaaaatcgcaacttcgtggaagtttgcgggcgaaaactgctattaa 6036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 2853535 - 2853435
Alignment:
Q  73 caaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagtta-gggggcgaaaactgc 171  Q
    |||||||| || |||||||||| |||| || |||||||||||       || ||||||| |||||| ||||||||||||||||| ||||| |||||||||    
T  2853535 caaaactgctacagttgcaaaacttaggggacggttttgtagtttttt-cttagggggcgaaaatcgcaacttcgtgaaagttatgggggtgaaaactgc 2853437  T
Q  172 ta 173  Q
    ||    
T  2853436 ta 2853435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 356
Target Start/End: Complemental strand, 14286553 - 14286510
Alignment:
Q  313 gtaacaaaagattaataagaaactaaaataaaagacaatgaaca 356  Q
    |||||| |||||||||||||||| |||||||||| |||||||||    
T  14286553 gtaacagaagattaataagaaacgaaaataaaaggcaatgaaca 14286510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 415
Target Start/End: Complemental strand, 1415684 - 1415565
Alignment:
Q  296 tgttagaacaacaaccggtaacaaaagattaataaga-aactaaa-ataaaagacaatgaacacacgatcaatttgttaatacagtttagccaatggtgc 393  Q
    ||||||||||| |||   ||||||||||||||||||| ||| ||| | |||||||||| || |||||||  | |||||||  |||||  |||||| |||     
T  1415684 tgttagaacaaaaactaataacaaaagattaataagagaacgaaagagaaaagacaataaatacacgat--acttgttaacgcagttcggccaattgtgg 1415587  T
Q  394 ctacctctgcgattatagagca 415  Q
    |||||||| |||||||||||||    
T  1415586 ctacctctacgattatagagca 1415565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 22730526 - 22730572
Alignment:
Q  294 tttgttagaacaacaaccggtaacaaaagattaataagaaactaaaa 340  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||||    
T  22730526 tttgttagaagaacaaccagtaacagaagattaataagaaacgaaaa 22730572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 5003137 - 5003092
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| ||||||| | ||||||||||||||||||||| ||||||    
T  5003137 caaaatcgcaacttcttaaaagttagggggcgaaaactgttattaa 5003092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 7504883 - 7504935
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    |||||||||||  ||||||| |||||  |||||||| ||||||||||||||||    
T  7504883 ggggccaaaattgcaacttcttgaaatatagggggccaaaactgctattaaac 7504935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 30349615 - 30349667
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| |  ||||||||||| | ||||||||||||||    
T  30349615 agggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaa 30349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 17070962 - 17070904
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  17070962 agggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccttt 17070904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 17577310 - 17577368
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  17577310 agggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccttt 17577368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 22192417 - 22192307
Alignment:
Q  65 tggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcga 164  Q
    |||||||||||||||| || ||||||||||  ||  |||||||||| ||        || |||||||||||||| ||||||||||||||||| |||||||    
T  22192417 tggggggtcaaaactgctacagttgcaaaacataaggggcggttttttaatttttttcttagggggccaaaatcgcaacttcgtgaaagttaaggggcga 22192318  T
Q  165 aaactgctatt 175  Q
    |||||||||||    
T  22192317 aaactgctatt 22192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 41487317 - 41487197
Alignment:
Q  64 ttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtgaaagttagggggc 162  Q
    ||||| || |||||||| || |||||||||| |||| ||||||||||||||        || |||||| ||||||| ||||||||||||| || ||||||    
T  41487317 ttgggcggccaaaactgctacagttgcaaaacttagggggcggttttgtagttttgtttcttagggggtcaaaatcgcaacttcgtgaaaattcgggggc 41487218  T
Q  163 gaaaactgctattaaaccttt 183  Q
    ||||||||||||||| |||||    
T  41487217 gaaaactgctattaagccttt 41487197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 33298556 - 33298641
Alignment:
Q  86 gttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctat 174  Q
    ||||||||| |||| ||||||||||||||       || |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  33298556 gttgcaaaacttagggggcggttttgtagtttt---cttagggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgctat 33298641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 45457014 - 45456964
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  45457014 caaaatcacaacttcgtaaaagttagggggcgaaaactgttattaaacctt 45456964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 35213159 - 35213028
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtg 149  Q
    ||||||||||| | |||||||| ||||||||||| |||||||||| |||  |||| |||||||||        | |||||| ||||||| |||||| ||     
T  35213159 accaaaaattggtattggggggccaaaactgttacagttgcaaaacttaaggggcagttttgtagtttttt--ttagggggtcaaaatcgcaactttgtc 35213062  T
Q  150 aaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||| |||||||||| |||||||| |||||    
T  35213061 aaagttagtgggcgaaaaccgctattaagccttt 35213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 415
Target Start/End: Complemental strand, 14958190 - 14958070
Alignment:
Q  295 ttgttagaacaacaaccggtaacaaaagattaat-aaga-aactaaaataaaagacaatgaacacacgatcaatttgttaatacagtttagccaatggtg 392  Q
    ||||||||||||||||  |||||||||||||||  |||| ||| |||    ||||||||||||| | |||  ||||||||| ||||||  |||||| |||    
T  14958190 ttgttagaacaacaactagtaacaaaagattaaacaagagaacgaaagaggaagacaatgaacataggat--atttgttaacacagttcggccaattgtg 14958093  T
Q  393 cctacctctgcgattatagagca 415  Q
    |||||||||||||||||||||||    
T  14958092 cctacctctgcgattatagagca 14958070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 27545614 - 27545669
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacc 180  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||    
T  27545614 agggggccaaaatcgcaacttcgtgatagttagggggcaaaaaccgctattaaacc 27545669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 37263406 - 37263356
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  37263406 caaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaacctt 37263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 37813217 - 37813159
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    ||||||||||||||  || || ||||||||||||||||||||||||||||||| |||||    
T  37813217 agggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagccttt 37813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 521698 - 521758
Alignment:
Q  122 ctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||| | |||||| ||||||||||||| |||||||| ||||||||||||||| ||||    
T  521698 ctcaggggtctaaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaagcctt 521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 6807284 - 6807176
Alignment:
Q  68 ggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaa 167  Q
    ||||||||||||| || |||||||||| |||| ||| ||||| ||||       || |||||||||||||| |||||||| |||||||| ||||| ||||    
T  6807284 ggggtcaaaactgctacagttgcaaaacttagggggtggttt-gtagtttttttcttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaa 6807186  T
Q  168 ctgctattaa 177  Q
    || |||||||    
T  6807185 ctactattaa 6807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 9762460 - 9762510
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||||||    
T  9762460 ggggccaaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaa 9762510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 25144201 - 25144255
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||| |||||| |||||||||||| |||||| |||||||| |||||||||||||    
T  25144201 ggggctaaaatcgcaacttcgtgaatgttaggaggcgaaaattgctattaaacct 25144255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 25897045 - 25896991
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    |||||||||||||| |||||| |  ||||||||||||| ||||||||||||||||    
T  25897045 agggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaaac 25896991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 39889825 - 39889775
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  39889825 ggggccaaaattgcaacttcgtgaaagttaagaggcgaaaactgctattaa 39889775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 14880593 - 14880638
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactg 170  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||    
T  14880593 agggggccaaaattgcaacttcgtgaaagttagggggcgaacactg 14880638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 16982681 - 16982632
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctat 174  Q
    ||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  16982681 aggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctat 16982632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 29657964 - 29658013
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  29657964 caaaatcgcaacttgatgaaagttagggagcgaaaactgctattaaacct 29658013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 35795590 - 35795647
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    |||||||||||||||||||||| |||||  |||||||| |||||||| ||||| ||||    
T  35795590 agggggccaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcctt 35795647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 37940167 - 37940215
Alignment:
Q  130 gccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaac 179  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  37940167 gccaaaatcacaacttcgtgaaagttaagggg-aaaaactgctattaaac 37940215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 20853433 - 20853381
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| ||||||| |||||||  |||||||||||||| ||||||||||||||    
T  20853433 agggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaa 20853381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 23702178 - 23702126
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||| ||||||||  ||||| |||||||||| ||||||||||||||||||||    
T  23702178 aggggaccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaa 23702126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 28349566 - 28349618
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||||||||| |||||| |||||||    
T  28349566 agggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaa 28349618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 9293213 - 9293280
Alignment:
Q  294 tttgttagaacaacaaccggtaacaaaagatt-aataaga-aactaaaataaaagacaatgaacacac 359  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||| |||   |||||||||||||||||    
T  9293213 tttgttagaacatcaaccggtaacaaaagattaaataagagaacaaaagagaaagacaatgaacacac 9293280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 755958 - 755900
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||||||||||||| ||||||| |||||  ||| |||| |||||||||||||| |||||    
T  755958 agggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagccttt 755900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 521576 - 521527
Alignment:
Q  128 gggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||| ||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  521576 gggctaaaatcacaacgtcgtaaaagtgaggggacgaaaactgctattaa 521527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 23702393 - 23702450
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||| |||||| ||||||   |||||||||||||| |||||||||||||| ||||    
T  23702393 agggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcctt 23702450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 4695014 - 4695066
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||||||||||  ||| | ||||||||| ||||||||| ||||    
T  4695014 agggggccaaaatcacaactttttgatacttagggggccaaaactgcttttaa 4695066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 15292543 - 15292611
Alignment:
Q  296 tgttagaacaacaaccggtaacaaaagatt-aataaga-aactaaaataaaagacaatgaacacacgat 362  Q
    ||||||||||||||||||||| | |||||| ||||||| ||| ||| ||||||  ||||||||||||||    
T  15292543 tgttagaacaacaaccggtaagagaagattaaataagagaacgaaagtaaaagttaatgaacacacgat 15292611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 15472912 - 15472980
Alignment:
Q  296 tgttagaacaacaaccggtaacaaaagatt-aataaga-aactaaaataaaagacaatgaacacacgat 362  Q
    ||||||||||||||||||||| | |||||| ||||||| ||| ||| ||||||  ||||||||||||||    
T  15472912 tgttagaacaacaaccggtaagagaagattaaataagagaacgaaagtaaaagttaatgaacacacgat 15472980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 18092962 - 18092914
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||| ||||||| || || ||||||||| ||||||||||||||    
T  18092962 ggccaaaatcgcaacttcttgtaacttagggggctaaaactgctattaa 18092914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 23475677 - 23475621
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||| ||||||||||||||| |||||  |||||||| |||||||| ||||| |||||    
T  23475677 ggggtcaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagccttt 23475621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 26824098 - 26824141
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctatta 176  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||    
T  26824098 caaaatcgcaacttcgtgaaagtta-ggggtgaaaactgctatta 26824141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 29657830 - 29657770
Alignment:
Q  54 aaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    |||||||| ||||||||| ||||||||  | |  |||||||||||| ||||||||||||||    
T  29657830 aaaattgactttggggggccaaaactgccacatatgcaaaatttagggggcggttttgtag 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 36688256 - 36688308
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| |||||||||||||| |  ||||||||||||  ||||||||||||||    
T  36688256 agggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaa 36688308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 46190 - 46073
Alignment:
Q  67 gggggtcaaaactgttatagttgcaaaatttagagggcggttttgtagnnnnnnn-ctcagggggccaaaatcacaacttcgtgaaagttagggggcgaa 165  Q
    ||||| |||||||| || |||||||||| |||| ||||||||||||||        || ||||||  |||||| ||||||||||||||||||||||||||    
T  46190 gggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggggcgaa 46091  T
Q  166 aactgctattaaaccttt 183  Q
    ||||||||| || |||||    
T  46090 aactgctataaagccttt 46073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 1526 - 1474
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  1526 agggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaa 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 19134 - 19043
Alignment:
Q  86 gttgcaaaatttagagggcggttttgtagnnnnnnnctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||| |||| || |||||||||||       || |||| ||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  19134 gttgcaaaacttaggggacggttttgtagtttttttcttagggagccgaaatcacaacttcgtgaaagttaaggggcgaaaactactattaa 19043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 19600 - 19652
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| |  ||||||||||| | ||||||||||||||    
T  19600 agggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 9603 - 9652
Alignment:
Q  132 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacct 181  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  9603 caaaatcgcaacttcgtgaaagttaggaggtgaaaactgctattaaacct 9652  T

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Target: scaffold0735 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 6115 - 6063
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||| |||||||||||||||||||||||||| |||| |||||| |||||||    
T  6115 agggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaa 6063  T

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Target: scaffold0515 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 3694 - 3642
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||||||||| ||||||||||||||    
T  3694 agggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 3642  T

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Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 3694 - 3642
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | |||||||||||||| ||||||||||||||    
T  3694 agggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 3642  T

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Target: scaffold0248 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 669 - 718
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctat 174  Q
    |||||||||||||| ||||||||| ||||||||| | |||||||||||||    
T  669 agggggccaaaatcgcaacttcgtaaaagttaggagacgaaaactgctat 718  T

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Target: scaffold0248; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 457 - 405
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    |||||||||||||| |||||| | | |||||||||||| ||| ||||||||||    
T  457 agggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaa 405  T

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Target: scaffold0328 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 9464 - 9409
Alignment:
Q  128 gggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 183  Q
    |||| ||||||||||||| | |||| ||||||||| ||||||||||||||| ||||    
T  9464 gggcaaaaatcacaactttgggaaaattagggggctaaaactgctattaaatcttt 9409  T

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Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 9679 - 9727
Alignment:
Q  127 ggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||| ||||||||||||||||||||||  |||||||||| ||||||||    
T  9679 ggggccagaatcacaacttcgtgaaagtta--gggcgaaaacggctattaa 9727  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 4199 - 4261
Alignment:
Q  52 caaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    ||||||||||  || | |||||||||||| || |||||||||| |||| ||||||||||||||    
T  4199 caaaaattgaccttagagggtcaaaactgctacagttgcaaaacttagggggcggttttgtag 4261  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 9610 - 9557
Alignment:
Q  125 agggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaa 178  Q
    ||||||||||||||||||||| |  ||||||| ||||| |||||| ||||||||    
T  9610 agggggccaaaatcacaactttggaaaagttaaggggctaaaactactattaaa 9557  T

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Target: scaffold0809 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 2883 - 2819
Alignment:
Q  50 accaaaaattgattttggggggtcaaaactgttatagttgcaaaatttagagggcggttttgtag 114  Q
    ||||||||||| | |||||| | |||||||| || ||||| ||||||||| |||| |||||||||    
T  2883 accaaaaattggtcttggggagccaaaactgctacagttgtaaaatttagggggcagttttgtag 2819  T

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Target: scaffold0372 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 182 - 122
Alignment:
Q  122 ctcagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaaacctt 182  Q
    ||||||| || |||||| |||||| | |||||||||| ||| |||||||||||||| ||||    
T  182 ctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcctt 122  T

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Target: scaffold0250 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 3623 - 3575
Alignment:
Q  129 ggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 177  Q
    ||||||||||  ||||| |||||||||||  ||||||||||||||||||    
T  3623 ggccaaaatcgtaactttgtgaaagttagaaggcgaaaactgctattaa 3575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 20183 - 20219
Alignment:
Q  131 ccaaaatcacaacttcgtgaaagttagggggcgaaaa 167  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  20183 ccaaaatcacaacttcgtaaaaattagggggcgaaaa 20219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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