View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20946_high_32 (Length: 203)
Name: NF20946_high_32
Description: NF20946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20946_high_32 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 8347701 - 8347531
Alignment:
| Q |
15 |
caaaggtgatgttatgagattgatatggtgtattatagctgatatatccaaaatcaatgagcaaagaaatacaaatagtagaaatgcattagctatacat |
114 |
Q |
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| T |
8347701 |
caaaggtgatgttatgagattgatatggtgtattatagctgatatatccaaaatcgatgagcaaagcaatacaaatagtagaaatgcattagctatacat |
8347602 |
T |
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| Q |
115 |
atatgatgtatatcaacagtggtagtagcaaagcatatatatgcaagatcataaatatttgtgactcagtt |
185 |
Q |
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| T |
8347601 |
atatgatgtatatcaacagtggtagtagcaaaacatgtatatgcaagatcaaaaatatttgtgactcagtt |
8347531 |
T |
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