View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20948_high_19 (Length: 237)
Name: NF20948_high_19
Description: NF20948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20948_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44708208 - 44707989
Alignment:
| Q |
1 |
cttgttgagaaattcttcaaatacatacactcaatatgtttttacatgtcattcattttgtgtagaccattcaatctaccttagacatgattaatgaaaa |
100 |
Q |
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| T |
44708208 |
cttgttgagaaattcttcaaatacatacactcaatatgtttttacatgtcattcattttgtgtagaccattcaatctaccttagacacgattaatgaaaa |
44708109 |
T |
|
| Q |
101 |
tctatgatttgtaataaataaattaatataaatacggtgatccctattaaggttgatgggagggtgaaatttgtgcatgcaaatacatcaatggttctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44708108 |
tctatgatttgtaataaataaattaatataaatacggtgatccctaataaggttgatgggagggtgaaatttgtgcatgcaaatacatcaatggttctat |
44708009 |
T |
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| Q |
201 |
caattcacaaattgatgaaa |
220 |
Q |
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|||||||||||||||||||| |
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| T |
44708008 |
caattcacaaattgatgaaa |
44707989 |
T |
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