View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2094_low_8 (Length: 270)
Name: NF2094_low_8
Description: NF2094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2094_low_8 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 2953766 - 2954007
Alignment:
| Q |
18 |
tctctgaagtgtataagaaaatacaagaagatcatttatttagtagagaaaaaatatgtgttaaagttgtaagaacaactaagatgattgacaattgcag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2953766 |
tctctgaagtgtataagaaaatacaagaagatcatttatttagtagagaaaaaatatgtgttaaggttgtaagaacaactaagatgattgacaattgcag |
2953865 |
T |
|
| Q |
118 |
gaatgttaacatgtaggaatttgaattccgacctaannnnnnnnataggtgtgtg----agtataataagttactaaatctatcaatggctgnnnnnnnt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
2953866 |
gaatgttaacatgtaggaatttgaattccgacctaattttttttataggtgtgtgtgatcgtataataagttactaaatctatcaatggctgaaaaaaat |
2953965 |
T |
|
| Q |
214 |
aaaattaataacaaaagaattttgattctcccttcactatat |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2953966 |
aaaattaataacaaaagaattttgattctcccttcactatat |
2954007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University