View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20951_low_9 (Length: 208)
Name: NF20951_low_9
Description: NF20951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20951_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 10979412 - 10979594
Alignment:
| Q |
16 |
ataattctaacaattttttcctttccaaaaaactctacaannnnnnn-------ggttacatctacaatttttattgatggtaatgtaattgtcacattt |
108 |
Q |
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| T |
10979412 |
ataattctaacaattttttcctttcaaaaaaactctacaatatatatattttttggttacctctacaatttttattgatggtaatgtaattgtcacattt |
10979511 |
T |
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| Q |
109 |
aataatgacccgaggaagtaataaaatacgcgcagtatttaacaaaattttgaataagattacctctcctccatacataggag |
191 |
Q |
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| T |
10979512 |
aataatgatccgaggaagtaataaaatacgcgcagtatttaacaaaattttgaataagattacctctcctccatacataggag |
10979594 |
T |
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