View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20954_high_110 (Length: 226)
Name: NF20954_high_110
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20954_high_110 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 35669770 - 35669574
Alignment:
| Q |
15 |
acttttgtccctttcactgcatgtgattgtgtgttctctcatgatgcttttcttatcaattttgcattaagtgtctttacataaccagttctcaaggtta |
114 |
Q |
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| T |
35669770 |
acttttgtccctttcactgcatgtgattgtgtgttctctcatgatgcttttcttatcaattttgcattaagtgtctttacataaccagttctcaaggtta |
35669671 |
T |
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| Q |
115 |
gaactcatagctacctttcttaaaactgtttcaaattttccaattttatttaaatgtagtttcttagtataccaatttattttgcaatatttctctg |
211 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
35669670 |
gaactcatagctacctttcttaaaacagtttcaaattttccaattttatttaaatgtagtttcttagtataccaatttattttgcactatttctctg |
35669574 |
T |
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