View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20954_high_69 (Length: 291)
Name: NF20954_high_69
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20954_high_69 |
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Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 279
Target Start/End: Original strand, 55122434 - 55122693
Alignment:
| Q |
20 |
gcctggagagaacgtgctaccgacagaggttcactccagtatctcagttccaccagggatatcagaggctgagcatgtgaatcagtcttcctgtctcaat |
119 |
Q |
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| T |
55122434 |
gcctggagagaacgtgctaccgacagaggttcactccagtatctcagttccaccagggatatcagatgctgagcatgtgaatcagtcttcctgtctcaat |
55122533 |
T |
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| Q |
120 |
tcaaagatggactgtgataaaactgctgaacaaagtgataaattgcacgaactcgatgcttccactcaggtagaagaatctggtgcagcaaaagagtcaa |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55122534 |
tcaaagatggactgtgataaaactgctgaacaaagtgataaattgcacgaactcgatgcttccactcaggtagaagaatctggtgcagcaaaagagtcaa |
55122633 |
T |
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| Q |
220 |
ggcctgcatctgaaaccatgaacttgtttccaacaattgaaaacactgataagcagctca |
279 |
Q |
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| T |
55122634 |
ggcctgcatctgaaaccatgaacctgtttccaacaattgaaaacactgataagcagctca |
55122693 |
T |
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