View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20954_high_76 (Length: 263)
Name: NF20954_high_76
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20954_high_76 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 40259301 - 40259541
Alignment:
| Q |
8 |
cgccacgccatggaaccatcgccatcttcaacaacactaagctcacagactcagatttttcgtttgaattgaaaactataaaaacggttttgggttgatg |
107 |
Q |
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| T |
40259301 |
cgccacgccatggaaccatcgccatcttcaacaacactaagctcacagactcagatttttcgtttgaattgaaaactataaaaacggttttgggttgatg |
40259400 |
T |
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| Q |
108 |
agaaaatgaagatactagtatttatgatgatttagattgataagattaaagattttgtgacaatagtaatattataatagtttgattaattggaaaatgg |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
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| T |
40259401 |
agaaaatgaagatactagtatttatgatgatttagattgataagattaaagattttgtgacaatagtaatagtataataatttgattaattggaaaatgg |
40259500 |
T |
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| Q |
208 |
aaggaattaggaggaaggtgaaggaatttgatgcaagaagt |
248 |
Q |
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| T |
40259501 |
aaggaattaggaggaaggtgaaggaatttgatgcaagaagt |
40259541 |
T |
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