View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20954_low_4 (Length: 777)
Name: NF20954_low_4
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20954_low_4 |
 | |
|
| [»] scaffold0363 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0363 (Bit Score: 639; Significance: 0; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 639; E-Value: 0
Query Start/End: Original strand, 8 - 762
Target Start/End: Original strand, 13412 - 14166
Alignment:
| Q |
8 |
atgtccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagcta |
107 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
13412 |
atgtccaaaaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttggaatttttttcagtttagcta |
13511 |
T |
|
| Q |
108 |
atgcacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttga |
207 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| |||||||||||| |
|
|
| T |
13512 |
atgcacagtcccattcaatttcacttttacaacgaagtaaagatcccaatactttcaaagctaacgggtttccgttggcataatcaactgctctttttga |
13611 |
T |
|
| Q |
208 |
gagctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaatt |
307 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13612 |
gagctccacatatccatccttaggcgagactttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaatt |
13711 |
T |
|
| Q |
308 |
ttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagtttt |
407 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13712 |
ttgtcgattcctccacttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagtttt |
13811 |
T |
|
| Q |
408 |
gaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaat |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13812 |
gaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatgcttttgagtcttcttctgatcatagatggtattagtttgggactgtcaat |
13911 |
T |
|
| Q |
508 |
atcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctg |
607 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13912 |
atcaagatcttcccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaacaagcagctg |
14011 |
T |
|
| Q |
608 |
ccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctg |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
14012 |
ccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaattccaatgatttgaacttgtgctg |
14111 |
T |
|
| Q |
708 |
aatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14112 |
aatcaaattttattaatgattgaatgctccaatagttttcatcaagtataaaatt |
14166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 639; Significance: 0; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 639; E-Value: 0
Query Start/End: Original strand, 8 - 762
Target Start/End: Complemental strand, 14405441 - 14404687
Alignment:
| Q |
8 |
atgtccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagcta |
107 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
14405441 |
atgtccaaaaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttggaatttttttcagtttagcta |
14405342 |
T |
|
| Q |
108 |
atgcacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttga |
207 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| |||||||||||| |
|
|
| T |
14405341 |
atgcacagtcccattcaatttcacttttacaacgaagtaaagatcccaatactttcaaagctaacgggtttccgttggcataatcaactgctctttttga |
14405242 |
T |
|
| Q |
208 |
gagctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaatt |
307 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14405241 |
gagctccacatatccatccttaggcgagactttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaatt |
14405142 |
T |
|
| Q |
308 |
ttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagtttt |
407 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14405141 |
ttgtcgattcctccacttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagtttt |
14405042 |
T |
|
| Q |
408 |
gaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaat |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14405041 |
gaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatgcttttgagtcttcttctgatcatagatggtattagtttgggactgtcaat |
14404942 |
T |
|
| Q |
508 |
atcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctg |
607 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14404941 |
atcaagatcttcccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaacaagcagctg |
14404842 |
T |
|
| Q |
608 |
ccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctg |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
14404841 |
ccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaattccaatgatttgaacttgtgctg |
14404742 |
T |
|
| Q |
708 |
aatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14404741 |
aatcaaattttattaatgattgaatgctccaatagttttcatcaagtataaaatt |
14404687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 11 - 762
Target Start/End: Original strand, 5607419 - 5608170
Alignment:
| Q |
11 |
tccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagctaatg |
110 |
Q |
| |
|
||||| ||||||| || |||| | | ||||||||||| | |||||| ||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
5607419 |
tccaaaaatatattttgctctgttttatccaattcattaaaactcattctaaatatagaatcaatttcgttgtttggcatttttttcagtttatctaatg |
5607518 |
T |
|
| Q |
111 |
cacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttgagag |
210 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
5607519 |
cacaatcccattctttttcacttttacaacgaagtaatgatcccaatactttcaaagctaaagggtttcctctggcataatcaattgctctttttgagag |
5607618 |
T |
|
| Q |
211 |
ctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaattttg |
310 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| |||||||| | | |||||| |||||||||||||||||||||||||| ||| | |
|
|
| T |
5607619 |
ctccacatatccatccttaggtgagactttgtcaaaagcattcaagctaaaaattctgagggaatttcgggagttcatcttcttaacttcatatattgtc |
5607718 |
T |
|
| Q |
311 |
tcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagttttgaa |
410 |
Q |
| |
|
| ||||||| |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
5607719 |
ttaattcctccacttatcagcacatgtttatccctagtagtcacaatgactgtactaccagatcctagccaaccatgtcctactccaatcaagttttgca |
5607818 |
T |
|
| Q |
411 |
gaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaatatc |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| | |||||||||| |
|
|
| T |
5607819 |
gaagttctgaattatgtacatcatctagtacaatgaaagatttcatgcttttgagtcttcttctgatcatggatgatattagtttgggagtgtcaatatc |
5607918 |
T |
|
| Q |
511 |
aagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctgcct |
610 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
5607919 |
aagatcttcttttagtaacttacaaagaagtttgttgcatgtgtaattgattccatgactttttgatacttctgtcaccttctcaaagaagcaactgcca |
5608018 |
T |
|
| Q |
611 |
tcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctgaat |
710 |
Q |
| |
|
|||||||||||||||| ||||||||||| | || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||| | |
|
|
| T |
5608019 |
tcatatttgaaagagaccctttgaaacatagcagtggcaagggttgtcttacctatgcctcccataccccaaagtccaatgatttgaacttctgttgagt |
5608118 |
T |
|
| Q |
711 |
caaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
5608119 |
caaattttattaaagattgaacgctccaatagttttcatcaggtatgaaatt |
5608170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 11 - 762
Target Start/End: Complemental strand, 5627951 - 5627200
Alignment:
| Q |
11 |
tccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagctaatg |
110 |
Q |
| |
|
||||| ||||||| || |||| | | ||||||||||| | |||||| ||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
5627951 |
tccaaaaatatattttgctctgttttatccaattcattaaaactcattctaaatatagaatcaatttcgttgtttggcatttttttcagtttatctaatg |
5627852 |
T |
|
| Q |
111 |
cacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttgagag |
210 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
5627851 |
cacaatcccattctttttcacttttacaacgaagtaatgatcccaatactttcaaagctaaagggtttcctctggcataatcaattgctctttttgagag |
5627752 |
T |
|
| Q |
211 |
ctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaattttg |
310 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| |||||||| | | |||||| |||||||||||||||||||||||||| ||| | |
|
|
| T |
5627751 |
ctccacatatccatccttaggtgagactttgtcaaaagcattcaagctaaaaattctgagggaatttcgggagttcatcttcttaacttcatatattgtc |
5627652 |
T |
|
| Q |
311 |
tcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagttttgaa |
410 |
Q |
| |
|
| ||||||| |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
5627651 |
ttaattcctccacttatcagcacatgtttatccctagtagtcacaatgactgtactaccagatcctagccaaccatgtcctactccaatcaagttttgca |
5627552 |
T |
|
| Q |
411 |
gaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaatatc |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| | |||||||||| |
|
|
| T |
5627551 |
gaagttctgaattatgtacatcatctagtacaatgaaagatttcatgcttttgagtcttcttctgatcatggatgatattagtttgggagtgtcaatatc |
5627452 |
T |
|
| Q |
511 |
aagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctgcct |
610 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
5627451 |
aagatcttcttttagtaacttacaaagaagtttgttgcatgtgtaattgattccatgactttttgatacttctgtcaccttctcaaagaagcaactgcca |
5627352 |
T |
|
| Q |
611 |
tcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctgaat |
710 |
Q |
| |
|
|||||||||||||||| ||||||||||| | || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||| | |
|
|
| T |
5627351 |
tcatatttgaaagagaccctttgaaacatagcagtggcaagggttgtcttacctatgcctcccataccccaaagtccaatgatttgaacttctgttgagt |
5627252 |
T |
|
| Q |
711 |
caaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
5627251 |
caaattttattaaagattgaacgctccaatagttttcatcaggtatgaaatt |
5627200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 8 - 762
Target Start/End: Original strand, 6309847 - 6310601
Alignment:
| Q |
8 |
atgtccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagcta |
107 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||| | ||||||||| | |
|
|
| T |
6309847 |
atgtctaaaaatatatctttctctttatcatccaattcattataactcaatctgaatataaaatcaatttcagtgtttggaatttctttcagtttagcca |
6309946 |
T |
|
| Q |
108 |
atgcacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttga |
207 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6309947 |
gtgcacaatcccattcaatttcacttttacaacgaagtaatgatcccaatactttcaaagctaaaggatttcctttggcataatcaactgctctttttga |
6310046 |
T |
|
| Q |
208 |
gagctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaatt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||| | |||||| |||| |||||||||||||||||||||||| |
|
|
| T |
6310047 |
gagctccacatatccatccttaggtgagacttttccaaaagcattcaagctgaaaagctggagggaattttgggaattcatcttcttaacttcataaatt |
6310146 |
T |
|
| Q |
308 |
ttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagtttt |
407 |
Q |
| |
|
|| || || |||| ||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6310147 |
ttttcaatccctccacttatcaagacatgcttatccctagtcgtcacaatgactgtgctaccagatcctagccaaccatgtcctactccaatcaagtttt |
6310246 |
T |
|
| Q |
408 |
gaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaat |
507 |
Q |
| |
|
| |||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||| |||||||||| ||||||| | ||||| |
|
|
| T |
6310247 |
gcagaagttctgaattatgtacatcatctattacaatgaaagatttcatgcgtttgagtcttctcatgatcattgatggtattaatttggaagtatcaat |
6310346 |
T |
|
| Q |
508 |
atcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctg |
607 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| | ||||||||| ||||| || || ||||||||||| |||||||| |||||||| ||| |
|
|
| T |
6310347 |
atcaagatcttccctgagtaacttggaaagaagtttgttgcatgtgtaattgatcccatgtctctttgatacttctgttaccttttctaagaagcaactg |
6310446 |
T |
|
| Q |
608 |
ccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctg |
707 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | |
|
|
| T |
6310447 |
ccttcatatttaaaagagaccctttgaaacatagcagcagcaagggttgtcttacctgtgcctcccataccccaaagtccaatgatttgaacttctgtta |
6310546 |
T |
|
| Q |
708 |
aatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6310547 |
gatcagattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
6310601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 11 - 762
Target Start/End: Complemental strand, 5550510 - 5549759
Alignment:
| Q |
11 |
tccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagctaatg |
110 |
Q |
| |
|
||||| ||||||| || |||| | | ||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| ||| |
|
|
| T |
5550510 |
tccaaaaatatattttgctctgttttatccaattcattaaaactcaatctgaatatagaatcaatttcattgtttggtatttttctcagtttagctgatg |
5550411 |
T |
|
| Q |
111 |
cacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttgagag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
5550410 |
cacaatcccattctttttcatttttacaactaagtaatgatcccaatacttgtaaagctaaagggtttcctctggcataatcaattgctctttttgagag |
5550311 |
T |
|
| Q |
211 |
ctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaattttg |
310 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||| | |||||| | |||||| |||||||||||||||||||||||||| ||| | |
|
|
| T |
5550310 |
ctccacatatccatccttaggtgagactttgttaaaagcattcaaacaaaaaagtcggagggaatttcgggagttcatcttcttaacttcatatattgtc |
5550211 |
T |
|
| Q |
311 |
tcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagttttgaa |
410 |
Q |
| |
|
| ||||||| |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
5550210 |
ttaattcctccacttatcagcacatgtttatccctagtagtcacaatgactgtactaccagatcctagccaaccatgtcctactccaatcaagttttgca |
5550111 |
T |
|
| Q |
411 |
gaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaatatc |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| | |||||||||| |
|
|
| T |
5550110 |
gaagttctgaattatgtacatcatctagtacaatgaaagatttcatgcttttgagtcttcttctgatcatggatgatattagtttgggagtgtcaatatc |
5550011 |
T |
|
| Q |
511 |
aagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctgcct |
610 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||| | ||||||||||||| | ||||| ||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
5550010 |
aagatcttcttttagtaacttagaaagaagtttgttgcatgtgtaattgattccacgactttttgatacttctgtaaccttttcaaagaagcaactgcca |
5549911 |
T |
|
| Q |
611 |
tcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctgaat |
710 |
Q |
| |
|
|||||||||||||||| ||||||||||| | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
5549910 |
tcatatttgaaagagaccctttgaaacatagcagtggcaagggttgtcttaccaatgcctcccataccccaaactccaatgatttgaacttctgttgaat |
5549811 |
T |
|
| Q |
711 |
caaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
5549810 |
caaattttattaaagattgaatgctccgatagttttcatcaggtatgaaatt |
5549759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 8 - 760
Target Start/End: Complemental strand, 13165605 - 13164853
Alignment:
| Q |
8 |
atgtccaagaatatatctttctctttatcatccaattcatcataactcaatctgaatatagaatcaatttcgttgtttgaannnnnnnncagtttagcta |
107 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||| ||||||| |||| | ||| |||||||||| || ||| |||||||| | |
|
|
| T |
13165605 |
atgtccaaaaatatatttttctctttatcatccaattcattataactccatcttagtatcctatcaatttcggcattggaaattttctccagtttagaca |
13165506 |
T |
|
| Q |
108 |
atgcacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaattgctctttttga |
207 |
Q |
| |
|
|||||||| ||||||| ||||| |||| ||||||||| | |||||||| ||||||| ||||||||| | |||||||| |||||||| ||||||||||| |
|
|
| T |
13165505 |
gtgcacaattccattctatttcacttttgcaacgaagtgatgatcccaaaactttcagagctaaagggatgcctttggcgtaatcaatcgctctttttga |
13165406 |
T |
|
| Q |
208 |
gagctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaacttcataaatt |
307 |
Q |
| |
|
|||||||||| |||| |||||||| || | ||||||||||||||| || ||||||| | |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13165405 |
gagctccacaaatccctccttagggaagacagtgtcaaaagcattcaagcagaaaagctggagggaattttgggagttcatcttcttaacttcataaatt |
13165306 |
T |
|
| Q |
308 |
ttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagtttt |
407 |
Q |
| |
|
| || ||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13165305 |
tcttcaattcctccacttatcagcacatgcttatccctagtcgtcacaatgactgtgctaccagctcctaaccaaccatgtcccactccaatcaagtttt |
13165206 |
T |
|
| Q |
408 |
gaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaat |
507 |
Q |
| |
|
| |||||||| || ||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||| |||||||||| |||| | || ||| |
|
|
| T |
13165205 |
gtagaagttccgaggtatgtacgtcatctagtacaatgaaagatttcatgcgtttgagtcttctcctgatcatggatggtattactttgagagtggtaat |
13165106 |
T |
|
| Q |
508 |
atcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctg |
607 |
Q |
| |
|
|||||| |||| || ||||||||||||||||||||||||||| | || ||||||||||||| ||| ||| ||||||||| ||||| |||||||| | |
|
|
| T |
13165105 |
atcaaggtcttcccctagtaacttggaaagaagtttgttgcatgtgtcattgattccatgcttttctgattgttctgtcacattttctaagaagcaatgg |
13165006 |
T |
|
| Q |
608 |
ccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgctg |
707 |
Q |
| |
|
|||||||| | |||||| |||||||||| || ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| | || |
|
|
| T |
13165005 |
ccttcatagtgagaagagactctttgaaacatggcagcagcaagggttgtcttgcctgtgccccccattccccaaactccaatgatttgaacttctgatg |
13164906 |
T |
|
| Q |
708 |
aatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaaa |
760 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| || |||||||| ||||||||| |
|
|
| T |
13164905 |
aatcaatttttattaaagatttaatgctccagtaattttcatcgagtatgaaa |
13164853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 97 - 762
Target Start/End: Complemental strand, 32633902 - 32633234
Alignment:
| Q |
97 |
cagtttagctaatgcacaatcccattctttttcatttttacaacgaagtaaagatcccaacactttcaaagctaaaggatttcctttggcataatcaatt |
196 |
Q |
| |
|
|||||||||||||||||| | ||||||| ||||| |||| | || ||| || |||||||| ||||| | ||||||||| || |||||||| |||||||| |
|
|
| T |
32633902 |
cagtttagctaatgcacagttccattctatttcacttttgctacaaagaaatgatcccaaaacttttagagctaaagggttgcctttggcgtaatcaatc |
32633803 |
T |
|
| Q |
197 |
gctctttttgagagctccacatatccatccttaggtgagtctttgtcaaaagcattcatgctaaaaagcttaacggaattgcgggagttcatcttcttaa |
296 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||| || |||||||||||||||| | ||| ||||||| | ||| || || |||||||| | |||| |
|
|
| T |
32633802 |
actctttctgagagctccacatatccctccttaggtaagactttgtcaaaagcattgaagctgaaaagctggagggagtttcgagagttcatttctttaa |
32633703 |
T |
|
| Q |
297 |
cttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactcc |
396 |
Q |
| |
|
||| || ||||||||| ||||||| || | |||||||||||||||||| || || || |||||| |||||||| |||||||||||||| || ||||| |
|
|
| T |
32633702 |
cttgatgaattttgtcaattcctccactaaccagcacatgcttatcccttgtcgttacaatgactatgctaccatctcctagccaaccattcccgactcc |
32633603 |
T |
|
| Q |
397 |
aatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttg |
496 |
Q |
| |
|
|||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
32633602 |
aatcaagttttgcagaagttccaaagtatgaacatcatctagtacaatgaaagatttcatgcgtttgagtcttctcatgatcatggatggtattactttg |
32633503 |
T |
|
| Q |
497 |
gaactgtcaatatcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaa |
596 |
Q |
| |
|
| | |||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||||||||| |||||||||||||| ||||| | |
|
|
| T |
32633502 |
gcagattcaatatcaagatcttcccttagtaacttagaaagaagtttgttgcatatgaaattgattccatgcctttttgatacttctgtcacattttcta |
32633403 |
T |
|
| Q |
597 |
agaagcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttg |
696 |
Q |
| |
|
||||||| ||||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||| |||| ||||| ||||||| |||||||||||| |
|
|
| T |
32633402 |
agaagcaactgccttcatacttgaaagagaccctttgaaacaaagcagcagcaagggttgtcttacctatgccccccatgccccaaagtccaatgatttg |
32633303 |
T |
|
| Q |
697 |
aacttgcgctgaatcaa---attttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
||||| |||||||| |||||||||||| |||||| | | |||||||||||| ||||||||||| |
|
|
| T |
32633302 |
aacttctattgaatcaattttttttattaaagactgaatggtgcgatagttttcatcgagtatgaaatt |
32633234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 279 - 762
Target Start/End: Complemental strand, 5571825 - 5571342
Alignment:
| Q |
279 |
gggagttcatcttcttaacttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctag |
378 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||| || ||||| |||||| ||||||||| ||| || |
|
|
| T |
5571825 |
gggagttcatcttcttaacttcataaatttcgtcaattcctccacttatcagcacatgtttatccctagtcgtcacaatgactatgctaccaggtccaag |
5571726 |
T |
|
| Q |
379 |
ccaaccatgtcccactccaatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatc |
478 |
Q |
| |
|
||||||| || |||||||||||||| ||| |||||||| || |||||||||||||||| ||||||||||||||||||| | |||||||||| ||||| |
|
|
| T |
5571725 |
ccaaccacctctcactccaatcaagtcttgcagaagttcagagttatgtacatcatctaatacaatgaaagatttcatatgtctgagtcttctcttgatc |
5571626 |
T |
|
| Q |
479 |
atagatggtattagtttggaactgtcaatatcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgata |
578 |
Q |
| |
|
|| | ||| |||| ||||| | |||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||| || | |
|
|
| T |
5571625 |
atggctgggattactttgggagtgtcaatacgaagatcttcccctagtaacttggaaagaagtttgttgcacgtgtaattgattccatgcttttttgaaa |
5571526 |
T |
|
| Q |
579 |
cttctgtcaccttttcaaagaagcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccatacc |
678 |
Q |
| |
|
||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| | || |||||| ||||||||||| ||||||||||| || |
|
|
| T |
5571525 |
cttctgtcaccctttctaagaagcaattgccttcatatttgaaagagaacctttgaaacatagcagcagcaagagttgtcttaccagtgcctcccattcc |
5571426 |
T |
|
| Q |
679 |
ccaaactccaatgatttgaacttgcgctgaatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaaatt |
762 |
Q |
| |
|
||||| |||||||||||||||| | |||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||| |
|
|
| T |
5571425 |
ccaaagtccaatgatttgaactgttgttgaatcaaattttattaaagatcgaacggcccaatagttttcatcaagtatcaaatt |
5571342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 281 - 759
Target Start/End: Original strand, 12176952 - 12177430
Alignment:
| Q |
281 |
gagttcatcttcttaacttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagcc |
380 |
Q |
| |
|
|||||||| | |||||||| || ||||| ||| ||||||| | | ||| |||||||||||| || || ||||| |||||| |||||||| ||| || | |
|
|
| T |
12176952 |
gagttcatttccttaacttgatgaatttcgtcaattcctcctcctgtcaacacatgcttatctctggttgtcacaatgactctgctaccaactccaaggc |
12177051 |
T |
|
| Q |
381 |
aaccatgtcccactccaatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcat |
480 |
Q |
| |
|
|| |||| || |||||||||| || | ||||||||| || || | |||||||||||||||||||||| |||||| | |||||||||| | | | ||| |
|
|
| T |
12177052 |
aatcatgccctgctccaatcaaattatctagaagttctaaagtacgaacatcatctagtacaatgaaagctttcatgcgtttgagtcttttcataaccat |
12177151 |
T |
|
| Q |
481 |
agatggtattagtttggaactgtcaatatcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatact |
580 |
Q |
| |
|
||||| ||||| ||| | | | ||||||| |||||||| || ||||||||| ||||||||| ||||| | | |||| ||| ||||| || || ||| || |
|
|
| T |
12177152 |
agatgatattactttaggagtctcaatatgaagatcttcccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattct |
12177251 |
T |
|
| Q |
581 |
tctgtcaccttttcaaagaagcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccatacccc |
680 |
Q |
| |
|
||||| || ||||| | |||||| || |||||||| || |||| | | | ||||| | || ||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
12177252 |
tctgtgacattttctaggaagcaactaccttcatacatggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgcccc |
12177351 |
T |
|
| Q |
681 |
aaactccaatgatttgaacttgcgctgaatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaa |
759 |
Q |
| |
|
||| |||||| || ||||| |||||| | ||||| ||| |||| |||||| ||||||||||||| ||||||| |
|
|
| T |
12177352 |
aaattccaatagttctaacttctcttgaatctacttttaataatgattcaatgcttgaatagttttcatctggtatgaa |
12177430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 284 - 690
Target Start/End: Original strand, 12188276 - 12188682
Alignment:
| Q |
284 |
ttcatcttcttaacttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaac |
383 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| ||||||| | ||| ||||| |||||| || || ||||| |||||| ||||||||| ||| || ||| |
|
|
| T |
12188276 |
ttcattttctcaacttcatgaatttcgtcaattcctcctcccgtcaacacatacttatctctggttgtcacaatgactctgctaccagctccaaggcaat |
12188375 |
T |
|
| Q |
384 |
catgtcccactccaatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcataga |
483 |
Q |
| |
|
|||| || |||||||||| || | ||||||||| || || | |||||||||||||||||||||| |||||| | |||||||||| | | | |||||| |
|
|
| T |
12188376 |
catgccctgctccaatcaaattatttagaagttctaaaatacgaacatcatctagtacaatgaaagctttcatgcgtttgagtcttttcataaccataga |
12188475 |
T |
|
| Q |
484 |
tggtattagtttggaactgtcaatatcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttct |
583 |
Q |
| |
|
|| ||||| ||| | | | ||||||| |||||||| || ||||| ||| ||||||||| ||||| | | |||| ||| ||||| || || ||| ||||| |
|
|
| T |
12188476 |
tgatattactttaggagtctcaatatgaagatcttcccctagtagcttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttct |
12188575 |
T |
|
| Q |
584 |
gtcaccttttcaaagaagcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaa |
683 |
Q |
| |
|
|| || ||||| |||||||| || ||||||||| || |||| | | | ||||| | || ||||||||||||||| ||| |||||||||| ||||||| |
|
|
| T |
12188576 |
gtgacattttctaagaagcaactaccttcatatctggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaa |
12188675 |
T |
|
| Q |
684 |
ctccaat |
690 |
Q |
| |
|
|||||| |
|
|
| T |
12188676 |
ttccaat |
12188682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 281 - 759
Target Start/End: Original strand, 12421380 - 12421858
Alignment:
| Q |
281 |
gagttcatcttcttaacttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagcc |
380 |
Q |
| |
|
|||||||| | |||||||| || ||||| ||| ||||||| | | ||| |||||||||||| || || ||||| |||||| |||||||| ||| || | |
|
|
| T |
12421380 |
gagttcatttccttaacttgatgaatttcgtcaattcctcctcctgtcaacacatgcttatctctggttgtcacaatgactctgctaccaactccaaggc |
12421479 |
T |
|
| Q |
381 |
aaccatgtcccactccaatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcat |
480 |
Q |
| |
|
|| |||| || |||||||||| || | ||||||||| || || | |||||||||||||||||||||| |||||| | |||||||||| | | | ||| |
|
|
| T |
12421480 |
aatcatgccctgctccaatcaaattatctagaagttctaaagtacgaacatcatctagtacaatgaaagctttcatgcgtttgagtcttttcataaccat |
12421579 |
T |
|
| Q |
481 |
agatggtattagtttggaactgtcaatatcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatact |
580 |
Q |
| |
|
||||| ||||| ||| | | | ||||||| |||||||| || ||||||||| ||||||||| ||||| | | |||| ||| ||||| || || ||| || |
|
|
| T |
12421580 |
agatgatattactttaggagtctcaatatgaagatcttcccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattct |
12421679 |
T |
|
| Q |
581 |
tctgtcaccttttcaaagaagcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccatacccc |
680 |
Q |
| |
|
||||| || ||||| | |||||| || |||||||| || |||| | | | ||||| | || ||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
12421680 |
tctgtgacattttctaggaagcaactaccttcatacatggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgcccc |
12421779 |
T |
|
| Q |
681 |
aaactccaatgatttgaacttgcgctgaatcaaattttattaaagattgaatgctccaatagttttcatcaagtatgaa |
759 |
Q |
| |
|
||| |||||| || ||||| |||||| | ||||| ||| |||| |||||| ||||||||||||| ||||||| |
|
|
| T |
12421780 |
aaattccaatagttctaacttctcttgaatctacttttaataatgattcaatgcttgaatagttttcatctggtatgaa |
12421858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 284 - 690
Target Start/End: Original strand, 12432704 - 12433110
Alignment:
| Q |
284 |
ttcatcttcttaacttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaac |
383 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| ||||||| | ||| ||||| |||||| || || ||||| |||||| ||||||||| ||| || ||| |
|
|
| T |
12432704 |
ttcattttctcaacttcatgaatttcgtcaattcctcctcccgtcaacacatacttatctctggttgtcacaatgactctgctaccagctccaaggcaat |
12432803 |
T |
|
| Q |
384 |
catgtcccactccaatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcataga |
483 |
Q |
| |
|
|||| || |||||||||| || | ||||||||| || || | |||||||||||||||||||||| |||||| | |||||||||| | | | |||||| |
|
|
| T |
12432804 |
catgccctgctccaatcaaattatttagaagttctaaaatacgaacatcatctagtacaatgaaagctttcatgcgtttgagtcttttcataaccataga |
12432903 |
T |
|
| Q |
484 |
tggtattagtttggaactgtcaatatcaagatctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttct |
583 |
Q |
| |
|
|| ||||| ||| | | | ||||||| |||||||| || ||||| ||| ||||||||| ||||| | | |||| ||| ||||| || || ||| ||||| |
|
|
| T |
12432904 |
tgatattactttaggagtctcaatatgaagatcttcccctagtagcttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttct |
12433003 |
T |
|
| Q |
584 |
gtcaccttttcaaagaagcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaa |
683 |
Q |
| |
|
|| || ||||| |||||||| || ||||||||| || |||| | | | ||||| | || ||||||||||||||| ||| |||||||||| ||||||| |
|
|
| T |
12433004 |
gtgacattttctaagaagcaactaccttcatatctggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaa |
12433103 |
T |
|
| Q |
684 |
ctccaat |
690 |
Q |
| |
|
|||||| |
|
|
| T |
12433104 |
ttccaat |
12433110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 9394119 - 9394355
Alignment:
| Q |
282 |
agttcatcttcttaacttcataaattttgtcgattcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagcca |
381 |
Q |
| |
|
||||||| | |||||||| | ||||| ||| || ||||||| ||||| |||||||||||| || || ||||| || || ||||||||| ||| || || |
|
|
| T |
9394119 |
agttcatttccttaacttgaagaatttcgtcaatccctctgcctatcaacacatgcttatctctggttgtcacaatttctctgctaccagctccaaggca |
9394218 |
T |
|
| Q |
382 |
accatgtcccactccaatcaagttttgaagaagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcata |
481 |
Q |
| |
|
| |||| || ||||||||||| |||| ||||||| | || |||| | || |||||||||||||||| |||||| |||||||||| | | |||| |
|
|
| T |
9394219 |
atcatgccctactccaatcaaattttctagaagttttaaagtatgaatgtcgtctagtacaatgaaagctttcatgtgtttgagtctttacataaccata |
9394318 |
T |
|
| Q |
482 |
gatggtattagtttggaactgtcaatatcaagatctt |
518 |
Q |
| |
|
|||| ||||| ||||| | |||||||| ||||||||| |
|
|
| T |
9394319 |
gatgatattactttgggagtgtcaataccaagatctt |
9394355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 5649914 - 5649854
Alignment:
| Q |
412 |
aagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttctt |
472 |
Q |
| |
|
|||||||||| || |||||||||||| ||||||||||| ||| || ||||||||||||||| |
|
|
| T |
5649914 |
aagttctgaagtacgtacatcatctaatacaatgaaagcttttatgcttttgagtcttctt |
5649854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 5603257 - 5603323
Alignment:
| Q |
412 |
aagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatc |
478 |
Q |
| |
|
|||||||||| || |||||||||||| ||||| ||||| ||| || ||||||||||||||| ||||| |
|
|
| T |
5603257 |
aagttctgaagtacgtacatcatctaatacaacgaaagcttttatgcttttgagtcttcttatgatc |
5603323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 5632113 - 5632047
Alignment:
| Q |
412 |
aagttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatc |
478 |
Q |
| |
|
|||||||||| || |||||||||||| ||||| ||||| ||| || ||||||||||||||| ||||| |
|
|
| T |
5632113 |
aagttctgaagtacgtacatcatctaatacaacgaaagcttttatgcttttgagtcttcttatgatc |
5632047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 314 - 732
Target Start/End: Original strand, 19492706 - 19493124
Alignment:
| Q |
314 |
attcctctgcttatcagcacatgcttatccctcgtagtcacgatgactgtgctaccagatcctagccaaccatgtcccactccaatcaagttttgaagaa |
413 |
Q |
| |
|
||||||| ||| ||||||||| || |||||| |||||||| |||||| ||||||||| ||||||||||||| || | ||| |||||| ||| ||| |
|
|
| T |
19492706 |
attcctccacttttcagcacatcctcatccctagtagtcacaatgactatgctaccagctcctagccaaccacctctctctctaatcaaagttttcagag |
19492805 |
T |
|
| Q |
414 |
gttctgaattatgtacatcatctagtacaatgaaagatttcatacttttgagtcttcttctgatcatagatggtattagtttggaactgtcaatatcaag |
513 |
Q |
| |
|
||||| | || | |||||||||||||||||||||| |||||| | |||||||||||| ||| ||| |||| |||| | | | |||| |||| || |
|
|
| T |
19492806 |
tttctggactacgaacatcatctagtacaatgaaagctttcattcctttgagtcttctaatgaccatggatgacattactataggcgtgtcgatattaac |
19492905 |
T |
|
| Q |
514 |
atctttccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaagaagcagctgccttca |
613 |
Q |
| |
|
||||| || ||||| |||||| |||||| || | | | |||||||||||| |||||| ||| |||||| ||||||||| ||||||||| | |||| | |
|
|
| T |
19492906 |
atcttccccgagtaatgtggaaacaagttttttataagtgaaattgattccattcctttttgattcttctgccaccttttctaagaagcaggtaccttga |
19493005 |
T |
|
| Q |
614 |
tatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaactccaatgatttgaacttgcgct-gaatca |
712 |
Q |
| |
|
|||||| ||||||| ||||||||| | || | ||| || |||||||||| ||||| |||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
19493006 |
tatttgcaagagaaattttgaaacatagcagcaacaatggctgtcttacctatgccttttgcaccccaaattccaatgatttgaactt-tgctagaatca |
19493104 |
T |
|
| Q |
713 |
aattttattaaagattgaat |
732 |
Q |
| |
|
|| |||||| |||||||||| |
|
|
| T |
19493105 |
aagtttattgaagattgaat |
19493124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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