View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20954_low_50 (Length: 352)

Name: NF20954_low_50
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20954_low_50
NF20954_low_50
[»] chr4 (15 HSPs)
chr4 (22-342)||(30020167-30020497)
chr4 (37-227)||(3415484-3415684)
chr4 (22-227)||(18716158-18716374)
chr4 (37-227)||(18736831-18737031)
chr4 (22-173)||(32429600-32429752)
chr4 (37-216)||(18670524-18670713)
chr4 (37-217)||(3425032-3425222)
chr4 (22-150)||(35095787-35095916)
chr4 (37-134)||(47071183-47071281)
chr4 (52-144)||(34128563-34128655)
chr4 (37-144)||(14646600-14646707)
chr4 (37-145)||(34279823-34279932)
chr4 (22-145)||(35090679-35090803)
chr4 (168-219)||(47071112-47071163)
chr4 (168-217)||(20251655-20251704)
[»] chr2 (8 HSPs)
chr2 (41-219)||(716043-716229)
chr2 (22-230)||(42779865-42780071)
chr2 (22-130)||(16284215-16284324)
chr2 (24-144)||(14917700-14917821)
chr2 (22-146)||(39196188-39196313)
chr2 (22-145)||(17720842-17720966)
chr2 (37-144)||(45120151-45120258)
chr2 (168-212)||(16272130-16272174)
[»] chr5 (11 HSPs)
chr5 (37-227)||(2022631-2022835)
chr5 (52-219)||(43378118-43378294)
chr5 (58-210)||(35369258-35369407)
chr5 (22-150)||(39908717-39908846)
chr5 (22-150)||(9872740-9872869)
chr5 (22-144)||(39903610-39903733)
chr5 (22-145)||(9877855-9877979)
chr5 (37-144)||(13556637-13556744)
chr5 (168-215)||(36203302-36203349)
chr5 (168-209)||(9851275-9851316)
chr5 (55-144)||(25183859-25183948)
[»] chr1 (15 HSPs)
chr1 (22-227)||(44524335-44524550)
chr1 (22-227)||(10186892-10187108)
chr1 (22-219)||(35624697-35624905)
chr1 (41-227)||(21432002-21432197)
chr1 (37-227)||(29681264-29681462)
chr1 (41-219)||(43358431-43358619)
chr1 (37-202)||(48366384-48366557)
chr1 (22-134)||(16050981-16051094)
chr1 (22-150)||(28598068-28598197)
chr1 (22-137)||(13654107-13654223)
chr1 (22-144)||(28574062-28574185)
chr1 (37-121)||(19310613-19310697)
chr1 (22-111)||(1187625-1187716)
chr1 (37-110)||(3465272-3465345)
chr1 (168-219)||(49061619-49061670)
[»] chr6 (13 HSPs)
chr6 (22-200)||(2887203-2887382)
chr6 (22-211)||(24509144-24509343)
chr6 (22-218)||(24509399-24509591)
chr6 (37-173)||(21937306-21937442)
chr6 (22-200)||(2888925-2889104)
chr6 (37-172)||(21937012-21937147)
chr6 (22-144)||(20752434-20752556)
chr6 (22-144)||(21275538-21275661)
chr6 (22-134)||(12909404-12909517)
chr6 (168-211)||(24075636-24075679)
chr6 (37-134)||(12934511-12934608)
chr6 (168-205)||(28611983-28612020)
chr6 (172-211)||(11932194-11932233)
[»] chr3 (23 HSPs)
chr3 (42-227)||(29827100-29827295)
chr3 (22-150)||(5458328-5458457)
chr3 (22-150)||(8464509-8464638)
chr3 (22-150)||(31076718-31076847)
chr3 (25-150)||(33702919-33703045)
chr3 (22-150)||(4054700-4054829)
chr3 (22-146)||(8458074-8458199)
chr3 (22-150)||(10586498-10586627)
chr3 (22-146)||(10591611-10591736)
chr3 (22-150)||(10673254-10673383)
chr3 (22-144)||(5481804-5481927)
chr3 (22-150)||(6853268-6853397)
chr3 (22-146)||(6858371-6858496)
chr3 (37-145)||(1302577-1302685)
chr3 (22-145)||(31081823-31081947)
chr3 (22-144)||(4049572-4049695)
chr3 (22-144)||(10678369-10678492)
chr3 (22-137)||(33703072-33703188)
chr3 (25-134)||(20890836-20890946)
chr3 (22-227)||(49784164-49784374)
chr3 (168-216)||(16729932-16729980)
chr3 (168-213)||(52654019-52654064)
chr3 (177-217)||(33710083-33710123)
[»] chr7 (17 HSPs)
chr7 (37-202)||(5436863-5437036)
chr7 (22-150)||(12856548-12856677)
chr7 (22-150)||(14615189-14615318)
chr7 (22-150)||(26055893-26056022)
chr7 (22-150)||(26065252-26065381)
chr7 (22-145)||(26050785-26050909)
chr7 (22-145)||(26060144-26060268)
chr7 (22-144)||(14610129-14610252)
chr7 (37-144)||(11056390-11056497)
chr7 (37-145)||(35352623-35352731)
chr7 (37-144)||(12851439-12851546)
chr7 (37-144)||(4181713-4181820)
chr7 (168-211)||(37469122-37469165)
chr7 (168-219)||(12239442-12239494)
chr7 (171-211)||(24870665-24870705)
chr7 (175-208)||(1840898-1840931)
chr7 (39-144)||(37460175-37460279)
[»] chr8 (11 HSPs)
chr8 (22-137)||(10341273-10341388)
chr8 (37-134)||(18608960-18609057)
chr8 (22-150)||(26982192-26982321)
chr8 (37-219)||(25953491-25953683)
chr8 (22-150)||(14315227-14315356)
chr8 (22-150)||(34107988-34108117)
chr8 (22-129)||(14318931-14319039)
chr8 (22-145)||(26987305-26987429)
chr8 (22-136)||(43957165-43957280)
chr8 (22-144)||(18884829-18884952)
chr8 (178-217)||(12729637-12729677)
[»] scaffold0391 (2 HSPs)
scaffold0391 (22-146)||(16370-16495)
scaffold0391 (55-145)||(16276-16366)
[»] scaffold0006 (1 HSPs)
scaffold0006 (22-137)||(143868-143984)
[»] scaffold0756 (1 HSPs)
scaffold0756 (43-144)||(3910-4011)
[»] scaffold0005 (1 HSPs)
scaffold0005 (37-144)||(170583-170690)
[»] scaffold0223 (1 HSPs)
scaffold0223 (22-144)||(7293-7416)


Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-134; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 22 - 342
Target Start/End: Original strand, 30020167 - 30020497
Alignment:
Q  22 ggggcgaatcaaaccaaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatctt 121  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30020167 ggggcgaatcgaaccaaaggttaatatggtaaccccatgcgctttgagttttacatgcataaccattgaacttttcaggtttcaagtgcaacagcatctt 30020266  T
Q  122 ctcaacaatcaagatagataacaatcttttgaatttatatgcacacttcatc---------ttcatcatcttcttgatcaagttattgcagcagacccca 212  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||         ||||||||||||||| |||||||||||||||||| ||||    
T  30020267 ctcaacaatcaagatagacaacaatattttgaatttatatgcacacttcatcatagtcatcttcatcatcttcttggtcaagttattgcagcagatccca 30020366  T
Q  213 a-cacaagatccaacactatataccaagaaataatcgggtgttttgcggtcttgggtttgtacttgcactcctcacattttattgggtaaatgatgttat 311  Q
    | |||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30020367 aacacaagctccaacaccatatatcaagaaataatcgggtgttttgctgtcttgggtttgtacttgcactcctcacattttattgggtaaatgatgttat 30020466  T
Q  312 atacgtagaaaaattacgtggagttgttcat 342  Q
    |||||||||||||||||||||||||||||||    
T  30020467 atacgtagaaaaattacgtggagttgttcat 30020497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 3415484 - 3415684
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| || ||||||||| ||||||||||||||||| |  ||| |||||||| |||||||||||||||| ||||||| |||||||||||||    
T  3415484 aaaggttagtgtggcaatcccatgcgctttgagttttacatgcatgataattaaacttttcaggtttcaagtgcaacaacatcttcccaacaatcaagat 3415583  T
Q  137 agataacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaagatccaac 226  Q
    | | |||||||||| |||||||| |||||||         ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  3415584 atacaacaatctttggaatttatgtgcacacttcatcatgttcatcttcatcatcttcttggtcaagttattgcagcagacccccaacacaagttccaac 3415683  T
Q  227 a 227  Q
    |    
T  3415684 a 3415684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 18716374 - 18716158
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| ||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  18716374 ggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgcattaccattaaacttttcaggtttcaagtgcagcagcatct 18716275  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacactt---------catcttcatcatcttcttgatcaagttattgcagcaga-ccc 210  Q
    || |||||||||||||| | |||||||||| |||||||| | |||||||         |||||| ||||||||||||  ||||||||| ||||||| |||    
T  18716274 tcccaacaatcaagatatacaacaatctttggaatttatgtacacacttcatcaagttcatcttaatcatcttcttggccaagttattacagcagacccc 18716175  T
Q  211 caacacaagatccaaca 227  Q
    ||||||||| |||||||    
T  18716174 caacacaagttccaaca 18716158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 18737031 - 18736831
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| |||  ||| ||||||| |||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||| |||||||||||||    
T  18737031 aaaggttagtttggctacctcatgcgctttgagttttacatgcataaccattaaacttttcaagtttcaagtgcagcagcatcttcccaacaatcaagat 18736932  T
Q  137 agataacaatcttttgaatttatatgcacactt---------catcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaagatccaac 226  Q
    | | |||||||||| |||||||| |||||||||         |||||| ||||||||||||| ||||||||| ||||||| |||||||||||  ||||||    
T  18736931 atacaacaatctttggaatttatgtgcacacttcatcaagttcatcttaatcatcttcttgaccaagttattacagcagacccccaacacaaattccaac 18736832  T
Q  227 a 227  Q
    |    
T  18736831 a 18736831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 32429600 - 32429752
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||| |  |||||    
T  32429600 ggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgcataaccattaaaattttcaggtttcaagtgcagccacatct 32429699  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacacttcatc 173  Q
    || |||||||||||||| |  ||||||||| |||||||| |||||||||||||    
T  32429700 tcccaacaatcaagatatactacaatctttagaatttatgtgcacacttcatc 32429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 37 - 216
Target Start/End: Complemental strand, 18670713 - 18670524
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| ||| |||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||| ||||| |||| |||||||||||||    
T  18670713 aaaggttagtgtggcaactccatgcgctttgaattttacatgcataaccattaaacttttcaggtttcaagtgcagcagcaacttcccaacaatcaagat 18670614  T
Q  137 agataacaatcttttgaatttatatgcacactt---------catcttcatcatcttcttgatcaagttattgcagcagac-cccaacac 216  Q
    | | ||||||||||  ||||||| |||||||||         |||||| |||||||||||| ||||||||||||| ||||| ||||||||    
T  18670613 atacaacaatctttgaaatttatgtgcacacttcatcatgttcatctttatcatcttcttggtcaagttattgcaacagacgcccaacac 18670524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 3425032 - 3425222
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||  || ||||||||| ||||||||| |||||||||  ||| |||||||| ||||||||||||||||  |||||| |||||||||||||    
T  3425032 aaaggttagtgtgacaatcccatgcgctttgagttttgcatgcataataattaaacttttcaggtttcaagtgcaacacaatcttcccaacaatcaagat 3425131  T
Q  137 agataacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgcagcaga-ccccaacaca 217  Q
    | | |||| ||||| |||||||| |||||||         ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  3425132 atacaacattctttggaatttatgtgcacactttatcatgttcatcttcatcatcttcttggtcaagttattgcagcagatccccaacaca 3425222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 35095916 - 35095787
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  35095916 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 35095817  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  35095816 tcccaacaaacaagatatataacaatcttt 35095787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 47071281 - 47071183
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttc-aagtgcaacagcatcttctcaacaatcaag 134  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||| ||||||   ||||||||||    
T  47071281 aaaggttagtgtggcaaccccatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaaagtgcaacaacatctttctaacaatcaag 47071183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 34128563 - 34128655
Alignment:
Q  52 aaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagataaca 144  Q
    ||||| |||| | |||||||||||||||||||||||| |||||||  ||||||||||||| |||  ||||| |||||||||||||| ||||||    
T  34128563 aaccctatgcactttgagttttacatgcataaccattaaacttttaaggtttcaagtgcagcagtctcttcccaacaatcaagatatataaca 34128655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 14646600 - 14646707
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||| ||| ||| ||||||||| || || ||||||||||||||||||||| |||||||| | ||||||||||| |||| || ||  ||||||||||||    
T  14646600 aaaggtcagtgtggaaaccccatgagctttaagttttacatgcataaccattaaacttttcagatttcaagtgcagcagcttcatcctaacaatcaagat 14646699  T
Q  137 agataaca 144  Q
    | ||||||    
T  14646700 atataaca 14646707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 34279823 - 34279932
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccatt-gaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaaga 135  Q
    |||||||||| ||  || ||||||||| ||||||||||||||||||||||||  ||| |||| ||||||||||||| | || ||||| | |||| |||||    
T  34279823 aaaggttagtgtgacaatcccatgcgctttgagttttacatgcataaccattaaaacgtttcaggtttcaagtgcagccgcctcttccctacaaacaaga 34279922  T
Q  136 tagataacaa 145  Q
    || |||||||    
T  34279923 tatataacaa 34279932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 35090803 - 35090679
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| | | || | |||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  35090803 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacactttaaattttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 35090704  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || |||||| ||||||  |||||||    
T  35090703 tcccaacaaacaagatttataacaa 35090679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 47071163 - 47071112
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagaccccaacacaag 219  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||| |||||    
T  47071163 ttcatcttcatcatcttcttagtcaagttattgtagcagaccccaaaacaag 47071112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 20251655 - 20251704
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagaccccaacaca 217  Q
    ||||||||||||||||||||  ||||  |||| |||||||||||||||||    
T  20251655 ttcatcttcatcatcttcttagtcaaactattacagcagaccccaacaca 20251704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 716229 - 716043
Alignment:
Q  41 gttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagat 140  Q
    |||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||| |     
T  716229 gttagtgtggcaaccccatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaagtgcaacaacatcttcccaacaatcaagatatac 716130  T
Q  141 aacaatcttttgaatttatatgcacacttcatc--------ttcatcatcttcttgatcaagttattgcagcagaccccaacacaag 219  Q
    |||||||||| |||||||| || || |||||||        ||||||||||||||| |||||||||||||||||||| |||||||||    
T  716129 aacaatctttagaatttatgtgtacgcttcatcatattcatttcatcatcttcttggtcaagttattgcagcagacctcaacacaag 716043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 42780071 - 42779865
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||||||||||||  || ||||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  42780071 ggggcgaatcgaacctaaaggttagtgtggtaaccccatatgctttgagttttacatgcataatcattaaacttttcaggtttcaagtgcagcagcatct 42779972  T
Q  121 tctcaacaatcaagatagataacaatcttttgaattt--atatgcacacttcatcttcatcatcttcttgatcaagttattgcagcagaccccaacacaa 218  Q
    || |||||| ||||||| | || ||||||| ||| ||   ||||     ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42779971 tcccaacaaacaagatatacaataatctttggaacttcattatg-----ttcatcttcatcatcttcttggtcaagttattgcagcagaccccaacacaa 42779877  T
Q  219 gatccaacacta 230  Q
      ||||||||||    
T  42779876 attccaacacta 42779865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 16284324 - 16284215
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| ||| | |||| ||| |||||||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  16284324 ggggcgaatcgaacctaaaaggtagtgtggcaaccccatgcgctttgagttttacatgcataatcattaaacttttcaggtttcaagtgcagcagcatct 16284225  T
Q  121 tctcaacaat 130  Q
    || |||||||    
T  16284224 tcccaacaat 16284215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 14917700 - 14917821
Alignment:
Q  24 ggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttc 122  Q
    |||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||||    
T  14917700 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctcttc 14917799  T
Q  123 tcaacaatcaagatagataaca 144  Q
     |||||| ||||||| ||||||    
T  14917800 ccaacaaacaagatatataaca 14917821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 39196188 - 39196313
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| || | |||    
T  39196188 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcatcctct 39196287  T
Q  121 tctcaacaatcaagatagataacaat 146  Q
    || |||||| ||||||| ||||||||    
T  39196288 tcccaacaaacaagatatataacaat 39196313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 17720842 - 17720966
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||| | ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  17720842 ggggcgaatcgaacctaaaggttaatgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 17720941  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || |||||| ||||||| |||||||    
T  17720942 tcccaacaaacaagatatataacaa 17720966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 45120258 - 45120151
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| ||||| |||||| ||| ||    
T  45120258 aaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctcttcccaacaaacaatat 45120159  T
Q  137 agataaca 144  Q
    | ||||||    
T  45120158 atataaca 45120151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 16272174 - 16272130
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagacccca 212  Q
    |||||||| |||||||||||  |||||||||||||||||||||||    
T  16272174 ttcatctttatcatcttcttagtcaagttattgcagcagacccca 16272130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 2022835 - 2022631
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||  |||||||||||||    
T  2022835 aaaggttagtatggcaacctcatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaagtgcagcagcatctttacaacaatcaagat 2022736  T
Q  137 agat----aacaatcttttgaatttatatgcaca---------cttcatcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaagatc 222  Q
    ||||    ||||||||||  ||||||| ||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  2022735 agatatacaacaatctttgaaatttatgtgcacatttcatcatgttcatcttcatcatcttcttgatcaagttattgcagcagacccccaacacaagttc 2022636  T
Q  223 caaca 227  Q
    |||||    
T  2022635 caaca 2022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 219
Target Start/End: Complemental strand, 43378294 - 43378118
Alignment:
Q  52 aaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagataacaatctttt 151  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||| || | ||||| |||||||||||||| | ||||||||||     
T  43378294 aaccccatgcgctttgagttttacatgcataaccattaaacttttcaagtttcaagtgcagcaacttcttcccaacaatcaagatatacaacaatctttg 43378195  T
Q  152 gaatttatatgcacactt---------catcttcatcatcttcttgatcaagttattgcagcagaccccaacacaag 219  Q
     ||||||| |||||||||         |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  43378194 aaatttatgtgcacacttcatcatattcatcttcatcatcttcatggtcaagttattgcagcagaccccaacacaag 43378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 35369258 - 35369407
Alignment:
Q  58 atgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagataacaatcttttgaattt 157  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||  ||||   ||||||||||||| | |||||||||| ||||||    
T  35369258 atgcgctttgagttttacatgcataaccattaaacttttcaggtttcaagtgcagcagtctctt---aacaatcaagatatacaacaatctttcgaattt 35369354  T
Q  158 atatgcacacttcatcttcatcatcttcttgatcaagttattgcagcagaccc 210  Q
    || |||| | ||||||||||| ||||| |||||||| ||||||||||||||||    
T  35369355 atgtgcatatttcatcttcattatctttttgatcaaattattgcagcagaccc 35369407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 39908846 - 39908717
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  39908846 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 39908747  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  39908746 tcccaacaaacaagatatataacaatcttt 39908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 9872740 - 9872869
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| | | ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  9872740 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacactttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 9872839  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  9872840 tcccaacaaacaagatatataacaatcttt 9872869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 39903733 - 39903610
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||||||||||||||||| |||| |||    
T  39903733 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcgggtttcaagtgcagcagcctct 39903634  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    |  |||||| ||||||| ||||||    
T  39903633 ttccaacaaacaagatatataaca 39903610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 9877855 - 9877979
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| | | ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  9877855 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacactttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 9877954  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || |||||| ||||||| |||||||    
T  9877955 tcccaacaaacaagatatataacaa 9877979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 13556637 - 13556744
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| |||||||||||||  | | ||||| |||||| ||||||    
T  13556637 aaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagtaacctcttcccaacaaacaagat 13556736  T
Q  137 agataaca 144  Q
    | ||||||    
T  13556737 atataaca 13556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 36203302 - 36203349
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagaccccaaca 215  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  36203302 ttcatcttcatcatcttcttgatgaagttattacagcagaccccaaca 36203349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 9851316 - 9851275
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagacc 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  9851316 ttcatcttcatcatctttttgatcaagttattgcagcagacc 9851275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 25183948 - 25183859
Alignment:
Q  55 cccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagataaca 144  Q
    ||||||||| || |||||||||||||||| |||| ||  |||| |||||||||||||  ||| |||||  ||||| ||| ||| ||||||    
T  25183948 cccatgcgctttcagttttacatgcataatcattaaagatttcaggtttcaagtgcagaagcctcttccgaacaaacaatataaataaca 25183859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 44524335 - 44524550
Alignment:
Q  22 ggggcgaatcaaaccaaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatctt 121  Q
    |||||||||| ||| ||| |||||| ||  |||||||||||| ||||||||| ||||||||||||||  ||||||| ||||||||||||| |||||||||    
T  44524335 ggggcgaatcgaactaaatgttagtgtgacaaccccatgcgctttgagttttgcatgcataaccattacacttttcaggtttcaagtgcagcagcatctt 44524434  T
Q  122 ctcaacaatcaagatagataacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgcagcaga-cccc 211  Q
    | |||||||||||||| | |||||||||| |||||||| |||| ||         ||||||||||||||||||||||||||||||||||| |||| ||||    
T  44524435 cccaacaatcaagatatacaacaatctttggaatttatgtgcatacttcatcatgttcatcttcatcatcttcttgatcaagttattgcaacagaccccc 44524534  T
Q  212 aacacaagatccaaca 227  Q
    || ||||| |||||||    
T  44524535 aatacaagttccaaca 44524550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 10186892 - 10187108
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| |||||||||||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  10186892 ggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgtataatcattaaacttttcaggtttcaagtgcaacagcatct 10186991  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacacttcatc---------ttcatcatcttcttgatcaagttattgcagcagacccc 211  Q
    |||||| |||||||||| | || |||||||  ||||||| ||||| |||||||         || |||||||||||||||||||||||| ||||||||||    
T  10186992 tctcaaaaatcaagatatacaataatctttgtaatttatgtgcacgcttcatcatagtcatatttatcatcttcttgatcaagttattgtagcagacccc 10187091  T
Q  212 -aacacaagatccaaca 227  Q
      ||||||| |||||||    
T  10187092 gcacacaagttccaaca 10187108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 35624905 - 35624697
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||||||  ||||||| |||| |||||||||||||||||||||||| || |||||  ||||||||||||  |||||||    
T  35624905 ggggcgaatcgaacctaaaggttagtatgacaaccccacgcgctttgagttttacatgcataaccattaaatttttcatgtttcaagtgcagtagcatct 35624806  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgcagcaga-ccc 210  Q
    ||  ||||||||| ||| | |||||||||| |||||||| |||||||         ||||||||||||||||||||| |||||||||||||||||| |||    
T  35624805 tccgaacaatcaaaatatacaacaatctttggaatttatgtgcacacttcgtaatattcatcttcatcatcttcttggtcaagttattgcagcagacccc 35624706  T
Q  211 caacacaag 219  Q
    |||||||||    
T  35624705 caacacaag 35624697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 41 - 227
Target Start/End: Original strand, 21432002 - 21432197
Alignment:
Q  41 gttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagat 140  Q
    |||||| ||| |||| ||||||  |||||||||||||||||||||||| |||||||| |||||||||||||  | || |||| |||||||||||||| |     
T  21432002 gttagtgtggcaacctcatgcgatttgagttttacatgcataaccattaaacttttcaggtttcaagtgcagtaaca-cttcccaacaatcaagatatac 21432100  T
Q  141 aacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaagatccaaca 227  Q
    |||||||||| |||||||| |||||||         ||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  21432101 aacaatctttggaatttatgtgcacacttcagcatgttcatcttcatcatcttcttggtcaagttattgcagcagacccccaacacaagttccaaca 21432197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 29681462 - 29681264
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    ||||||| |||||| |||||||||||| |||||||| |||||||||||||||  | ||||| |||||||||||||||||||||||| |||| ||||||||    
T  29681462 aaaggttggtatggcaaccccatgcgctttgagttt-acatgcataaccattagatttttcaggtttcaagtgcaacagcatcttcccaacgatcaagat 29681364  T
Q  137 agataacaatcttttgaatttatatgcacactt---------catcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaagatccaac 226  Q
    | | |||||||||| |||||||| |||||||||         ||||||||||||||||||| |||||||||||||  ||| |||||||||||| ||||||    
T  29681363 atacaacaatctttggaatttatttgcacacttcatcatgttcatcttcatcatcttcttggtcaagttattgca-tagacccccaacacaagttccaac 29681265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 43358619 - 43358431
Alignment:
Q  41 gttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagat 140  Q
    |||||| ||| |||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||| |     
T  43358619 gttagtgtggcaacctcatgcgctttgagttttacatgcataatcattaaacttttcaggtttcaagtgcaacagcatcttcccaacaatcaagatatac 43358520  T
Q  141 aacaatcttttgaatttatatgcacact---------tcatcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaag 219  Q
    ||||||| || ||||| || ||||| ||         ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  43358519 aacaatcattggaattcatgtgcacgcttcatcatagtcatcttcatcatcttcttgatcaatttattgcagtagatccccaacacaag 43358431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 48366384 - 48366557
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    ||||||| |||||| |||||||||||| |||||||| |||||||||||||||  | ||||| |||||||||||||||| ||||||| |||| ||||||||    
T  48366384 aaaggttggtatggcaaccccatgcgctttgagttt-acatgcataaccattagatttttcaggtttcaagtgcaacaacatcttcccaacgatcaagat 48366482  T
Q  137 agataacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgca 202  Q
    | | |||||||||| |||||||| |||||||         |||||||||||||||||||||||||||||||||||    
T  48366483 atacaacaatctttcgaatttatttgcacacttcatcatgttcatcttcatcatcttcttgatcaagttattgca 48366557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 16051094 - 16050981
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||| |||||  ||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||    
T  16051094 ggggcgaatcgaacctaaaggttagtgtggcaaccccgtgcgctctgagttttacatgcataaccattaaatttttcaggtttcaagtgcagcagcatct 16050995  T
Q  121 tctcaacaatcaag 134  Q
    || |||||||||||    
T  16050994 tcccaacaatcaag 16050981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 28598197 - 28598068
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  28598197 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 28598098  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  28598097 tcccaacaaacaagatatataacaatcttt 28598068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 13654223 - 13654107
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| |||| |||||||||| ||| |||| ||| |||| ||||||||||||| |||| |||    
T  13654223 ggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaattttacatgcgtaagcattaaacatttcaggtttcaagtgcagcagcctct 13654124  T
Q  121 tctcaacaatcaagata 137  Q
    || |||||| |||||||    
T  13654123 tcccaacaaacaagata 13654107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 28574185 - 28574062
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| || |||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  28574185 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttaagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 28574086  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  28574085 tcccaacaaacaagatatataaca 28574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 19310697 - 19310613
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatctt 121  Q
    |||||||||| | | |||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||| ||||||| ||||    
T  19310697 aaaggttagtgttgcaaccccatgcgctttgagtttcacatgcataaccattaaacttttcaggtttcaagtacaacagcctctt 19310613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 1187716 - 1187625
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttc-gggtttcaagtgca 111  Q
    ||||||||||||||| |||||||||| ||| |||||||||| | |||||||||||||||||||| ||| || |||||  |||||||||||||    
T  1187716 ggggcgaatcaaacctaaaggttagtgtggcaaccccatgcactttgagttttacatgcataactattaaatttttctaggtttcaagtgca 1187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 3465345 - 3465272
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgc 110  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||    
T  3465345 aaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgc 3465272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 49061619 - 49061670
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagaccccaacacaag 219  Q
    ||||||||| ||||||| ||| | || |||||||||||||||||||||||||    
T  49061619 ttcatcttcttcatctttttggtaaaattattgcagcagaccccaacacaag 49061670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 2887382 - 2887203
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| ||| |||||| ||  |||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||| || | |||    
T  2887382 ggggcgaatcgaacctaaatgttagtgtgacaaccccatgcgctttgagttttacatacataaccattaaacttttcaggtttcaagtgcagcaacttct 2887283  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacacttcatcttcatcatcttcttgatcaagttattg 200  Q
    | ||||||||||||||| | |||||| ||| |||| ||| ||||||||||||||||||||| ||||||||||| ||||||    
T  2887282 tttcaacaatcaagatatacaacaatatttagaatatatgtgcacacttcatcttcatcattttcttgatcaaattattg 2887203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 24509144 - 24509343
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||   |||||||||||| |||| |||    
T  24509144 ggggcgaatcgaacctaaaggttagtatggcaaccccatgcgttttgagttttacatgcataaccattaaacttttgaagtttcaagtgcagcagcctct 24509243  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacact---------tcatcttcatcatcttcttgatcaagttattgcagcagacccc 211  Q
    || |||||||||||||| ||||||||||||  ||||||| |||| |||         |||||||||||||||||||| ||||||| ||||||||||||||    
T  24509244 tcccaacaatcaagatatataacaatctttgaaatttatttgcaaacttcatcatactcatcttcatcatcttcttggtcaagtttttgcagcagacccc 24509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 24509591 - 24509399
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||  |||||||||||||||| | |||    
T  24509591 ggggcgaatcgaacctaaaggttagtatggcaaccccatgcgatttgagttttacatgcataaccattaaacttttaaggtttcaagtgcaacaacctct 24509492  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacacttcatcttcatcatcttcttgatcaagttattgcagcagacc-ccaacacaa 218  Q
    || |||||||||||||| | |||||| |||  ||||| | |||||      ||||||||||||||||| | || ||||||||||||||| |||||||||    
T  24509491 tcccaacaatcaagatatacaacaatatttgaaatttttgtgcac------tcttcatcatcttcttggtgaacttattgcagcagacctccaacacaa 24509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 21937442 - 21937306
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| |||||| |||||||| |||||||||||||||||  ||||| |||||||||||||    
T  21937442 aaaggttagtatggaaaccccatgcgctttgagttttatatgcattaccattaaacttttcaggtttcaagtgcaacagtctcttcccaacaatcaagat 21937343  T
Q  137 agataacaatcttttgaatttatatgcacacttcatc 173  Q
    | | || |||||||  ||||||| |||||||||||||    
T  21937342 atacaaaaatctttgtaatttatgtgcacacttcatc 21937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 2889104 - 2888925
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| ||| |||||| ||  |||||||||||| ||||||||||||| |||||||||| |||||| | | ||||||||||| || | |||    
T  2889104 ggggcgaatcgaacctaaatgttagtgtgacaaccccatgcgctttgagttttacattcataaccattaaactttccagatttcaagtgcagcaacttct 2889005  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacacttcatcttcatcatcttcttgatcaagttattg 200  Q
    | ||||||||||||||| | |||||| ||| |||| ||| |||||| |||||||||||||| ||||||||||| ||||||    
T  2889004 tttcaacaatcaagatatacaacaatatttagaatatatgtgcacatttcatcttcatcattttcttgatcaaattattg 2888925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 21937012 - 21937147
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||||||| ||||| |||| | |||||||||||||||||||||||| ||||||||| |||||||||||| || | | ||| |||||||||||||    
T  21937012 aaaggttagtatggaaaccctatgcactttgagttttacatgcataaccattaaacttttcgagtttcaagtgcagcaacctgttcccaacaatcaagat 21937111  T
Q  137 agataacaatcttttgaatttatatgcacacttcat 172  Q
    | | ||||||||||  ||||||| || |||||||||    
T  21937112 ataaaacaatctttgaaatttatgtgtacacttcat 21937147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 20752434 - 20752556
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||||||| ||||||||| || ||||||||||||||||||| |||| ||| |||| |||||||||||||||||| ||     
T  20752434 ggggcgaatcgaacctaaaggttagtatggcaaccccatgtgctttgagttttacatgcataatcattaaacatttcaggtttcaagtgcaacagcctc- 20752532  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  20752533 tcccaacaaacaagatatataaca 20752556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 21275661 - 21275538
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  21275661 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 21275562  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  21275561 tcccaacaaacaagatatataaca 21275538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 12909517 - 12909404
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| ||||  |||||||||||||| ||| |  ||||| ||||| ||||||| | || |||    
T  12909517 ggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaagtttacatgcataacgattaattttttcaggttttaagtgcagccgcctct 12909418  T
Q  121 tctcaacaatcaag 134  Q
    || |||||||||||    
T  12909417 tcccaacaatcaag 12909404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 24075679 - 24075636
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagacccc 211  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  24075679 ttcatctttatcatcttcttaatcaagttattgcagcagacccc 24075636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 12934608 - 12934511
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaag 134  Q
    |||||||||| ||| |||||||||||| ||||  |||||||||||||  ||| |  ||||| ||||| ||||||| | || ||||| |||||||||||    
T  12934608 aaaggttagtgtggcaaccccatgcgctttgaagtttacatgcataatgattaattttttcaggttttaagtgcagccgcctcttcccaacaatcaag 12934511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 28612020 - 28611983
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagca 205  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  28612020 ttcatattcatcatcttcttgatcaagttattgcagca 28611983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 11932194 - 11932233
Alignment:
Q  172 tcttcatcatcttcttgatcaagttattgcagcagacccc 211  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  11932194 tcttcatcatcttcttcatcaagttattgcagcaaacccc 11932233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 29827295 - 29827100
Alignment:
Q  42 ttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagata 141  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| ||||||| ||| |||||  |||||||||||||| | |    
T  29827295 ttagtgtggtaaccccatgcgctttgagttttacatgcataaccattaaacttttcaggttttaagtgcagcagtatctttccaacaatcaagatataca 29827196  T
Q  142 acaatcttttgaatttatatgcacact---------tcatcttcatcatcttcttgatcaagttattgcagcagacccc-aacacaagatccaaca 227  Q
    ||||||||| |||||||| | || |||         ||||||||||||| |||||| || ||||||||||||||||||| |||||||| |||||||    
T  29827195 acaatctttggaatttatgttcaaacttcatcatagtcatcttcatcattttcttggtcgagttattgcagcagaccccaaacacaagttccaaca 29827100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 5458328 - 5458457
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  5458328 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 5458427  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  5458428 tcccaacaaacaagatatataacaatcttt 5458457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 8464638 - 8464509
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  8464638 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 8464539  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  8464538 tcccaacaaacaagatatataacaatcttt 8464509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 31076718 - 31076847
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  31076718 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 31076817  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  31076818 tcccaacaaacaagatatataacaatcttt 31076847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 33702919 - 33703045
Alignment:
Q  25 gcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttct 123  Q
    ||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||||     
T  33702919 gcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctcttcc 33703018  T
Q  124 caacaatcaagatagataacaatcttt 150  Q
    |||||| ||||||| ||||||||||||    
T  33703019 caacaaacaagatatataacaatcttt 33703045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 4054829 - 4054700
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| || | ||||||||||||| |||| |||    
T  4054829 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacattccaggtttcaagtgcagcagcctct 4054730  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  4054729 tcccaacaaacaagatatataacaatcttt 4054700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 8458199 - 8458074
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  8458199 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 8458100  T
Q  121 tctcaacaatcaagatagataacaat 146  Q
    || |||||| ||||||| ||||||||    
T  8458099 tcccaacaaacaagatatataacaat 8458074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 10586498 - 10586627
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||| ||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  10586498 ggggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 10586597  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  10586598 tcccaacaaacaagatatataacaatcttt 10586627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 10591611 - 10591736
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  10591611 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 10591710  T
Q  121 tctcaacaatcaagatagataacaat 146  Q
    || |||||| ||||||| ||||||||    
T  10591711 tcccaacaaacaagatatataacaat 10591736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 10673254 - 10673383
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  10673254 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 10673353  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||| ||| ||||||||||||    
T  10673354 tcccaacaaacaaaatatataacaatcttt 10673383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 5481804 - 5481927
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  5481804 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 5481903  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  5481904 tcccaacaaacaagatatataaca 5481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 6853268 - 6853397
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  6853268 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 6853367  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| | || || ||||||||||||    
T  6853368 tcccaacaaactagttatataacaatcttt 6853397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 6858371 - 6858496
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| || | |||    
T  6858371 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcatcctct 6858470  T
Q  121 tctcaacaatcaagatagataacaat 146  Q
    || |||||| ||||||| ||||||||    
T  6858471 tcccaacaaacaagatatataacaat 6858496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 1302577 - 1302685
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| ||||| |||||| ||||||    
T  1302577 aaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctcttcccaacaaacaagat 1302676  T
Q  137 agataacaa 145  Q
    | |||||||    
T  1302677 atataacaa 1302685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 31081823 - 31081947
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||  ||||||||||||| |||| |||    
T  31081823 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacattttaggtttcaagtgcagcagcctct 31081922  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || |||||| ||||||| |||||||    
T  31081923 tcccaacaaacaagatatataacaa 31081947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 4049695 - 4049572
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||  |||| ||||||||||||| |||| |||    
T  4049695 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaatatttcaggtttcaagtgcagcagcctct 4049596  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  4049595 tcccaacaaacaagatatataaca 4049572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 10678369 - 10678492
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  10678369 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 10678468  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||| ||| ||||||    
T  10678469 tcccaacaaacaaaatatataaca 10678492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 33703188 - 33703072
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  33703188 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 33703089  T
Q  121 tctcaacaatcaagata 137  Q
    |  |||||| |||||||    
T  33703088 ttccaacaaacaagata 33703072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 20890946 - 20890836
Alignment:
Q  25 gcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttct 123  Q
    |||||||||||  |||||||||| ||| |||||||| ||| |||||||||||||||||||||||| |||||||  | ||| ||||||| |||  |||||     
T  20890946 gcgaatcaaacttaaaggttagtgtggcaaccccatacgctttgagttttacatgcataaccattaaactttttagatttaaagtgcagcagtctcttcc 20890847  T
Q  124 caacaatcaag 134  Q
    |||||||||||    
T  20890846 caacaatcaag 20890836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 49784374 - 49784164
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| ||| |||||| ||  |||||||||||| |||||||  |||||||||| |||| ||||      |||||||||||| || | |||    
T  49784374 ggggcgaatcgaacctaaatgttagtttgacaaccccatgcgctttgagtt--acatgcataatcattaaacta-----gtttcaagtgcagcaacctct 49784282  T
Q  121 tctcaacaatcaagatagataacaatcttttgaatttatatgcacac----------ttcatcttcatcatcttcttgatcaagttattgcagcaga-cc 209  Q
    | |||| |||||||||| | |||||||||| |||||||| |||||||          ||||| ||||||||||||||  |||||||||||||||||| ||    
T  49784281 tgtcaaaaatcaagatatacaacaatctttggaatttatgtgcacactttcatcacattcatgttcatcatcttcttcgtcaagttattgcagcagaccc 49784182  T
Q  210 ccaacacaagatccaaca 227  Q
    |||||||||  |||||||    
T  49784181 ccaacacaaattccaaca 49784164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 16729932 - 16729980
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagaccccaacac 216  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  16729932 ttcatcttcatcttcttattgatcaagttattgcagcagaccccgacac 16729980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 52654019 - 52654064
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagaccccaa 213  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||    
T  52654019 ttcattttcatcatcttcttgatcaagttattgccgcaaaccccaa 52654064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 33710083 - 33710123
Alignment:
Q  177 atcatcttcttgatcaagttattgcagcagaccccaacaca 217  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  33710083 atcattttcttggtcaagatattgcagcagaccccaacaca 33710123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 5436863 - 5437036
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    ||||||| |||||| |||||||||||| |||||||| |||||||||||||||  | |||||  |||||||||||| |||||||||| |||| ||||||||    
T  5436863 aaaggttggtatggcaaccccatgcgctttgagttt-acatgcataaccattagatttttcaagtttcaagtgcagcagcatcttcccaacgatcaagat 5436961  T
Q  137 agataacaatcttttgaatttatatgcacac---------ttcatcttcatcatcttcttgatcaagttattgca 202  Q
    | | |||||||||| |||||||| |||||||         ||||||||||||||||||||| |||||||||||||    
T  5436962 atacaacaatctttggaatttatttgcacacttcatcatgttcatcttcatcatcttcttggtcaagttattgca 5437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 12856677 - 12856548
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  12856677 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 12856578  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  12856577 tcccaacaaacaagatatataacaatcttt 12856548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 14615318 - 14615189
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  14615318 ggggcgaatcgaacctaaaggttagtgtggaaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 14615219  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  14615218 tcccaacaaacaagatatataacaatcttt 14615189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 26056022 - 26055893
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||| ||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  26056022 ggggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 26055923  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  26055922 tcccaacaaacaagatatataacaatcttt 26055893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 26065381 - 26065252
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||| ||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  26065381 ggggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 26065282  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  26065281 tcccaacaaacaagatatataacaatcttt 26065252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 26050909 - 26050785
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  26050909 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 26050810  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || |||||| ||||||| |||||||    
T  26050809 tcccaacaaacaagatatataacaa 26050785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 26060268 - 26060144
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  26060268 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 26060169  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || |||||| ||||||| |||||||    
T  26060168 tcccaacaaacaagatatataacaa 26060144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 14610252 - 14610129
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  14610252 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 14610153  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  14610152 tcccaacaaacaagatatataaca 14610129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 11056497 - 11056390
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||| |||| ||| ||||  |||||||||||| || | ||||| |||||| ||||||    
T  11056497 aaaggttagtgtggcaaccccatgcgctttgagttttacatgcataatcattaaacatttcatgtttcaagtgcagcaacctcttcccaacaaacaagat 11056398  T
Q  137 agataaca 144  Q
    | ||||||    
T  11056397 atataaca 11056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 35352623 - 35352731
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||| |||||| |  ||||||||||||  | | ||||| || |||||||| |    
T  35352623 aaaggttagtgtggtaaccccatgcgctttgagttttacatgcttaaccattaaactttccatgtttcaagtgcaggaacctcttcccatcaatcaagtt 35352722  T
Q  137 agataacaa 145  Q
    | |||||||    
T  35352723 atataacaa 35352731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 12851546 - 12851439
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| | ||||||||||| |||| ||||| |||||| ||||||    
T  12851546 aaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcagttttcaagtgcagcagcctcttcccaacaaacaagat 12851447  T
Q  137 agataaca 144  Q
    | ||||||    
T  12851446 atataaca 12851439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 4181713 - 4181820
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||  |||||||| ||| |||| |||||||| |||||||||| ||||||||  |||||||||||| || | ||||   |||||||||| |    
T  4181713 aaaggttagtgtgacaaccccatacgctttgaattttacatacataaccattaaacttttcaagtttcaagtgcagcaacctctttctaacaatcaagtt 4181812  T
Q  137 agataaca 144  Q
    | ||||||    
T  4181813 atataaca 4181820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 37469122 - 37469165
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagacccc 211  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  37469122 ttcatcttcatcatcttcttgatcaagttattgctgcaaacccc 37469165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 12239494 - 12239442
Alignment:
Q  168 ttcatcttcatcatcttcttgatcaagttattgcagcagacc-ccaacacaag 219  Q
    |||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  12239494 ttcatcatcatcatcttcttaatcaagttattgcagcaaacctccaacacaag 12239442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 24870665 - 24870705
Alignment:
Q  171 atcttcatcatcttcttgatcaagttattgcagcagacccc 211  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  24870665 atcttcatcatcttcttcatcaagttattgcagcaaacccc 24870705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 1840898 - 1840931
Alignment:
Q  175 tcatcatcttcttgatcaagttattgcagcagac 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  1840898 tcatcatctacttgatcaagttattgcagcagac 1840931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 37460175 - 37460279
Alignment:
Q  39 aggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatag 138  Q
    |||||||||||| |||||  ||||| || |||||||||||||||| |||| ||  |||| |||||||||| ||||||  ||||  || |||||||| ||     
T  37460175 aggttagtatgggaacccg-tgcgctttaagttttacatgcataatcattaaaaatttcaggtttcaagtccaacagtctctttccagcaatcaagttat 37460273  T
Q  139 ataaca 144  Q
    ||||||    
T  37460274 ataaca 37460279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 10341273 - 10341388
Alignment:
Q  22 ggggcgaatcaaaccaaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatctt 121  Q
    |||||||||| |||| ||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||  ||||||| ||||  ||||||||    
T  10341273 ggggcgaatcgaacctaaggttagtatggcaatcccatgcgctttgagttttacatgcataatcattgaacttttcaagtttcaaatgcagtagcatctt 10341372  T
Q  122 ctcaacaatcaagata 137  Q
    | ||||||||||||||    
T  10341373 cccaacaatcaagata 10341388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 18608960 - 18609057
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaag 134  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||||||||  |||||||| ||||||||||||| |||||||||| |||||||||||    
T  18608960 aaaggttagtgtggcaaccccatgtgctttgagttttacatgcataaccatcaaacttttcaggtttcaagtgcagcagcatcttcccaacaatcaag 18609057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 26982192 - 26982321
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  26982192 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 26982291  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  26982292 tcccaacaaacaagatatataacaatcttt 26982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 219
Target Start/End: Original strand, 25953491 - 25953683
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||||||| ||| |||||||||| | ||||||||||||||| |||||||  |||||||| |||||||||||||  ||  ||||| ||||||| |||||    
T  25953491 aaaggttagtgtggcaaccccatgcactttgagttttacatgcttaaccatcaaacttttcaggtttcaagtgcagtagtctcttcccaacaattaagat 25953590  T
Q  137 agataacaatcttttgaatttatatgcacacttca---------tcttcatcatcttcttgatcaagttattgcagcaga-ccccaacacaag 219  Q
    | | ||||||||||  ||||||| |||||||||||         ||||||| ||||||||| | ||||||||||| |||| ||||||||||||    
T  25953591 atacaacaatctttgaaatttatgtgcacacttcatcatattcatcttcattatcttcttggttaagttattgcatcagacccccaacacaag 25953683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 14315227 - 14315356
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  14315227 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcttct 14315326  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||| ||| ||||||||||||    
T  14315327 tcccaacaaacaaaatatataacaatcttt 14315356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 34108117 - 34107988
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| |||| |||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  34108117 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgatttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 34108018  T
Q  121 tctcaacaatcaagatagataacaatcttt 150  Q
    || |||||| ||||||| ||||||||||||    
T  34108017 tcccaacaaacaagatatataacaatcttt 34107988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 14318931 - 14319039
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  14318931 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 14319030  T
Q  121 tctcaacaa 129  Q
    || ||||||    
T  14319031 tcccaacaa 14319039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 26987305 - 26987429
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||| ||| ||| || |||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  26987305 ggggcgaatcgaacctaaaggttagtgtggcaaccacatacgctttaagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 26987404  T
Q  121 tctcaacaatcaagatagataacaa 145  Q
    || | |||| ||||||| |||||||    
T  26987405 tccctacaaacaagatatataacaa 26987429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 43957165 - 43957280
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||  |||||||| ||| |||| |||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  43957165 ggggcgaatcgaacctaaaggttagtgtgacaaccccatacgctttgaattttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 43957264  T
Q  121 tctcaacaatcaagat 136  Q
    || |||||| ||||||    
T  43957265 tcccaacaaacaagat 43957280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 18884952 - 18884829
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| ||| |||||| ||| |||||||| ||  ||||||||||  ||||||||| || |||||||| | || ||||||||||| | | |    
T  18884952 ggggcgaatcgaacctaaatgttagtgtggcaaccccatacgttttgagttttatgtgcataaccgttaaacttttcagattccaagtgcaacatccttt 18884853  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    |   ||||||||||||| ||||||    
T  18884852 ttcaaacaatcaagatatataaca 18884829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 12729637 - 12729677
Alignment:
Q  178 tcatcttcttgatcaagttattgcagcaga-ccccaacaca 217  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  12729637 tcatcttcttgatcaaggtattgcagcagatccccaacaca 12729677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 16495 - 16370
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||    
T  16495 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctct 16396  T
Q  121 tctcaacaatcaagatagataacaat 146  Q
    || |||||| ||||||| ||||||||    
T  16395 tcccaacaaacaagatatataacaat 16370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 16366 - 16276
Alignment:
Q  55 cccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagataacaa 145  Q
    ||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| ||||| |||||| ||||||| |||||||    
T  16366 cccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctcttcccaacaaacaagatatataacaa 16276  T

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Target: scaffold0006 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 143984 - 143868
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| |||| |||||||||| ||| |||| ||| |||| ||||||||||||| |||| |||    
T  143984 ggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaattttacatgcgtaagcattaaacatttcaggtttcaagtgcagcagcctct 143885  T
Q  121 tctcaacaatcaagata 137  Q
    || |||||| |||||||    
T  143884 tcccaacaaacaagata 143868  T

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Target: scaffold0756 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 4011 - 3910
Alignment:
Q  43 tagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagatagataa 142  Q
    |||| ||| |||||||| ||| ||||||||||||||||| | |||| ||| |||| ||||||||||||| |||| |||||||||||| ||||||| ||||    
T  4011 tagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtgcagcagcctcttctcaacaaacaagatatataa 3912  T
Q  143 ca 144  Q
    ||    
T  3911 ca 3910  T

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Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 170690 - 170583
Alignment:
Q  37 aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatcttctcaacaatcaagat 136  Q
    |||||| ||| ||| ||||||||| || || ||||||||||||||||||||| |||||||| | ||||||||||| |||| || ||  ||||||||||||    
T  170690 aaaggtcagtgtggaaaccccatgagctttaagttttacatgcataaccattaaacttttcagatttcaagtgcagcagcttcatcctaacaatcaagat 170591  T
Q  137 agataaca 144  Q
    | ||||||    
T  170590 atataaca 170583  T

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Target: scaffold0223 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 7293 - 7416
Alignment:
Q  22 ggggcgaatcaaacc-aaaggttagtatggtaaccccatgcgcattgagttttacatgcataaccattgaacttttcgggtttcaagtgcaacagcatct 120  Q
    |||||||||| |||| |||||||||| ||| |||||||| ||| ||||||||||||||||| | |||| ||  ||   | ||||||||||| |||| |||    
T  7293 ggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaaaattaaagatttcaagtgcagcagcctct 7392  T
Q  121 tctcaacaatcaagatagataaca 144  Q
    || |||||| ||||||| ||||||    
T  7393 tcccaacaaacaagatatataaca 7416  T

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