View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20954_low_95 (Length: 249)
Name: NF20954_low_95
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20954_low_95 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 28118748 - 28118984
Alignment:
| Q |
13 |
gaaggacaaaagaggaaaagtgaatcatttaaggtatatataaccaataaccaatcttatataaatttttatcttatgtttttcttcacgcaagaagcaa |
112 |
Q |
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| T |
28118748 |
gaaggacaaaagaggaaaagtgaatcatttaaggtatatataaccaataaccaatcttatataaatttttatcttatgtttttcttcacgcaagaagcaa |
28118847 |
T |
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| Q |
113 |
aaatgtttaggttaagcctttgctccttcgcgtggctttaaagaatttttcttaaatttcctcattaaatcactagctatataaccccaccaaatattcc |
212 |
Q |
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| T |
28118848 |
aaatgtttaggttaagcctttgctccttcgcgtggctttaaagaatttttcttaaatttcctcattaaatcactagctatataaccccaccaaatattcc |
28118947 |
T |
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| Q |
213 |
tacaaacactaccttaattctttcctttcaatttttc |
249 |
Q |
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| T |
28118948 |
tacaaacactaccttaattctttcctttcaatttttc |
28118984 |
T |
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