View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20954_low_96 (Length: 249)
Name: NF20954_low_96
Description: NF20954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20954_low_96 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 249
Target Start/End: Complemental strand, 49042586 - 49042346
Alignment:
| Q |
9 |
agcacagacatggataaagaaagactaacggcggagatggatttcaaagattcaacctccgccgttatcaaaatccggcgacgtttaccggattttctac |
108 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042586 |
agcatagacatggataaagaaagactaacggcggagatggatttcaaagattcaacctccgccgttatcaaaatccggcgacgtttaccggattttctac |
49042487 |
T |
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| Q |
109 |
aaacggtgaaactcaagtacgtaaagttaggttatggctattcatgcaatgccacaaccattctcattttcacattcgtcgtccctctcttactcttcct |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042486 |
aaacggtgaaactcaagtacgtaaagttaggttatggctattcatgcaatgccacaaccattctcattttcacattcgtcgtccctctcttactcttcct |
49042387 |
T |
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| Q |
209 |
caccgttcagttccaactcaccgatctaaaactccaccgtc |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042386 |
caccgttcagttccaactcaccgatctaaaactccaccgtc |
49042346 |
T |
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